Sed0021337 (gene) Chayote v1

Overview
NameSed0021337
Typegene
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L32, putative
LocationLG08: 38986017 .. 38988362 (+)
RNA-Seq ExpressionSed0021337
SyntenySed0021337
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTAATTGGAACAGGCATTCTCTATATAAACCATTTAGACCCTTAAAGCTTATCGTCGAAGCTTGGACGGCCAAGGAAACCCTAATTTCTGTGAGTTGCTCTCTCTGAACTGCCGCTAGGGTTTATATTGATCATCTTCTCTTTGTACCACGTTTCTTTGCCTTGTATGATGAGATTTTGTTCTATTGCATAATTATTCCTCAATTGTTTTGGTTAATTTAGTTCATCTAGTGTGGGATCTGTGTTTTTGTCTCGTCATTTAGGGTTCGCTGTTAGTTTCGCAAGATTTGATGCATTTGAGCTTATGAATAATCGTCCATGGTATGGAATCTGTAGGTATAAGTGAAAATGGCTGTGCCTTTGCTGACGAAGAAGATCGTGAAGAAGAGGACCGCTAAGTTCAAGAGGCCTCAGCATGATCGAAGGATCTGCGTCAAGGTATTTTACTTCGCTATTAGTTTTTTCATTTTATGTACGTTTGTATGTTAGAGTAGGATGCGCAACAACGAAGGTGATGATATGTATTGTCGCCCCAGTCTTACTTGCATCAATAGATGTATGGTGGTGATTGACTGATTGTCTGATTCTTGTTGTTAATAGAACTTAGAACCCATTTACCATGATTTATTTCTCAAATTTCTGATTTCTGGGTTTTATGAATTTTATTTTCTCTTATCTGAGAATCTGTATTGTCGTTTAGTTGGATCTGATCAGTTATGACAATATTTTGTAATTAGATCTTAGTATTAATAATGTATGTTAATTAGTATTGCAAATTAGTTTTTTTTAATCTAATGCTATACAACATGGCGTGATGATGAAAACCCATCGATTCTGCATTTGAATGATGAATATTTTCATGCACTACCATCTGATCTAGTTGTATAATCCATTTTATTAGTTTATCCTCGTTTTGTTTCTTTTTTTTTCTTAAATAGATTCTTATTTCTGCAGTCAATGATGTTACCTACCCATATTAATGATTTCCTGTGATTAAATAATCAAATATCACCATCTTTCGACTGAGGTTGCAGTTATATGTACTTTTCCTTGGACATTTACTTTTTGTCTATTGCTATGAATCTGAAATTGCTCTTGGTATCTAATGTCTGGACTTCCATTTAATGGCTTGACATTTCGTTTTTTGGGGCATAGAACAATTTCATACAGGTCTTGCGACACGATTAGCTTTAAACTTGTAGCTTTCTGTTACTAAATCCCTGCATACAGATTTATTTCCTTAATCCATACTTCGATTGGGTTACAGTATAGATATTTTTATCAAGACGTTACATATCTTCTTTATCTAGAAGTTTCTATTTGCCCGTGGTATCTAATGTCCATACTTTTATTTAATAGTTGGACATTTCGTTGTTTAGGGCATATAACAATTTATACAGGTCTTGCGACACGGTTAGCTTAATATTTATAAGCTTTCTGTTACTAAATCCCTGTGTACAGCTATATTGTTTTATCATCAATTTCTACCCTCTTCCGCACTTCTGGTTTTCTCATCTTGCATTTATTCTACAGGAAAGCTGGAGAAGACCAAAGGGTATTGATTCCAGGGTTAGAAGGAAGTTCAAAGGATGCACTCTCATGCCGAATGTTGGTTACGGTACCGACAAGAAGACGCGCCACTACCTGCCCAATGGGTTCAAGAAGTTTGTTGTTCACAATGTCAAGGAGCTCGAACTCTTGATGATGCACAACAGGTTCGTTTTGATACTTAATATTAACCATCTTTAATTAAAGTTTTGTTTATTTTTGGCCTTTTGTCTGATCCATTACGATTCTTATTGCAGGACTTATTGTGCCGAAATTGCACACGATGTGTCTACAAAGAAGAGGAAGGAGATTGTTGAGAGGGCAGCTCAACTTGATGTGGTAGTTACCAACAAGCTTGCTAGGTTGCGCAGCCAAGAGGATGAATGAACAATTTAAATTTTTGAATGCTGTTTTCATCATGTTTTGTAGTGAGATTTCGGTAATATATACTTTTTTGATTCTAGAGATTCTGATATTTAATGTTGTTTGAATTTTATGACTCTTTACAATATATTTCGAATTTTTAATTTTGAAGTCTTTTTTCATGCTTTTCATCAAGGTTTCATATCTTAGCATGATTGGATATGCTGCTCTCTAATCACCGTTGCTGATGGCTCTTCAGCATTTTGCCATTGCTTGCATATCTGATCATTATATTTCATCCCTTTTTGAGATGAGATTGCAAGTTATAAGATTTTTTTTCTGAAAAACGTTATAAGATTTTATATATTTTTTGATATATGTCTTGATTATTTGTGTTGTATTTTCTTTTAATGTAGTTTAATATGTAAAGCAGCC

mRNA sequence

CCTAATTGGAACAGGCATTCTCTATATAAACCATTTAGACCCTTAAAGCTTATCGTCGAAGCTTGGACGGCCAAGGAAACCCTAATTTCTGTATAAGTGAAAATGGCTGTGCCTTTGCTGACGAAGAAGATCGTGAAGAAGAGGACCGCTAAGTTCAAGAGGCCTCAGCATGATCGAAGGATCTGCGTCAAGGAAAGCTGGAGAAGACCAAAGGGTATTGATTCCAGGGTTAGAAGGAAGTTCAAAGGATGCACTCTCATGCCGAATGTTGGTTACGGTACCGACAAGAAGACGCGCCACTACCTGCCCAATGGGTTCAAGAAGTTTGTTGTTCACAATGTCAAGGAGCTCGAACTCTTGATGATGCACAACAGGACTTATTGTGCCGAAATTGCACACGATGTGTCTACAAAGAAGAGGAAGGAGATTGTTGAGAGGGCAGCTCAACTTGATGTGGTAGTTACCAACAAGCTTGCTAGGTTGCGCAGCCAAGAGGATGAATGAACAATTTAAATTTTTGAATGCTGTTTTCATCATGTTTTGTAGTGAGATTTCGGTAATATATACTTTTTTGATTCTAGAGATTCTGATATTTAATGTTGTTTGAATTTTATGACTCTTTACAATATATTTCGAATTTTTAATTTTGAAGTCTTTTTTCATGCTTTTCATCAAGGTTTCATATCTTAGCATGATTGGATATGCTGCTCTCTAATCACCGTTGCTGATGGCTCTTCAGCATTTTGCCATTGCTTGCATATCTGATCATTATATTTCATCCCTTTTTGAGATGAGATTGCAAGTTATAAGATTTTTTTTCTGAAAAACGTTATAAGATTTTATATATTTTTTGATATATGTCTTGATTATTTGTGTTGTATTTTCTTTTAATGTAGTTTAATATGTAAAGCAGCC

Coding sequence (CDS)

ATGGCTGTGCCTTTGCTGACGAAGAAGATCGTGAAGAAGAGGACCGCTAAGTTCAAGAGGCCTCAGCATGATCGAAGGATCTGCGTCAAGGAAAGCTGGAGAAGACCAAAGGGTATTGATTCCAGGGTTAGAAGGAAGTTCAAAGGATGCACTCTCATGCCGAATGTTGGTTACGGTACCGACAAGAAGACGCGCCACTACCTGCCCAATGGGTTCAAGAAGTTTGTTGTTCACAATGTCAAGGAGCTCGAACTCTTGATGATGCACAACAGGACTTATTGTGCCGAAATTGCACACGATGTGTCTACAAAGAAGAGGAAGGAGATTGTTGAGAGGGCAGCTCAACTTGATGTGGTAGTTACCAACAAGCTTGCTAGGTTGCGCAGCCAAGAGGATGAATGA

Protein sequence

MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGTDKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNKLARLRSQEDE
Homology
[Close]
BLAST of Sed0021337 vs. NCBI nr
Match: KAG6573344.1 (60S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 254.6 bits (649), Expect = 4.7e-64
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKKIVKKRT KFKRPQ DR+I VKESWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLTKKIVKKRTTKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Sed0021337 vs. NCBI nr
Match: XP_022927470.1 (60S ribosomal protein L32-1 [Cucurbita moschata] >XP_022927471.1 60S ribosomal protein L32-1 [Cucurbita moschata] >XP_023001487.1 60S ribosomal protein L32-1 [Cucurbita maxima] >XP_023001488.1 60S ribosomal protein L32-1 [Cucurbita maxima] >KAG6583929.1 60S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019543.1 60S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 254.2 bits (648), Expect = 6.1e-64
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLL+KKIVKKRT KFKRPQ DR+I VKESWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Sed0021337 vs. NCBI nr
Match: XP_023542869.1 (60S ribosomal protein L32-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 254.2 bits (648), Expect = 6.1e-64
Identity = 125/133 (93.98%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKK+VKKRT KFKRPQ DR+I VKESWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLTKKVVKKRTTKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Sed0021337 vs. NCBI nr
Match: XP_023519489.1 (60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo] >XP_023519490.1 60S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 253.8 bits (647), Expect = 8.0e-64
Identity = 125/133 (93.98%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLL+KK+VKKRT KFKRPQ DR+I VKESWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLSKKVVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Sed0021337 vs. NCBI nr
Match: XP_038894346.1 (60S ribosomal protein L32-1 [Benincasa hispida])

HSP 1 Score: 253.8 bits (647), Expect = 8.0e-64
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLL+KKIVKKRT KFKRPQ DR+I VKE+WRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 21  MAVPLLSKKIVKKRTKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 80

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 81  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 140

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 141 TNKLARLRSQEDE 153

[Close]
BLAST of Sed0021337 vs. ExPASy Swiss-Prot
Match: P49211 (60S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2)

HSP 1 Score: 239.6 bits (610), Expect = 2.1e-62
Identity = 120/133 (90.23%), Postives = 126/133 (94.74%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKK+VKKR+AKF RPQ DRRI VKESWRRPKGIDSRVRRKFKG TLMPNVGYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHN  ELELLMMHNRTYCAEIAH+VSTKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133

[Close]
BLAST of Sed0021337 vs. ExPASy Swiss-Prot
Match: Q9FHG2 (60S ribosomal protein L32-2 OS=Arabidopsis thaliana OX=3702 GN=RPL32B PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.3e-61
Identity = 117/133 (87.97%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKK+VKKR+AKF RPQ DRRI VKESWRRPKGIDSRVRRKFKG TLMPNVGYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN  ELELLMMHNRTYCAEIAH++STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

[Close]
BLAST of Sed0021337 vs. ExPASy Swiss-Prot
Match: E2RKA8 (60S ribosomal protein L32 OS=Canis lupus familiaris OX=9615 GN=RPL32 PE=1 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 4.3e-44
Identity = 87/130 (66.92%), Postives = 111/130 (85.38%), Query Frame = 0 

Query: 4   PLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGTDKK 63
           PL+  KIVKKRT KF R Q DR + +K +WR+P+GID+RVRR+FKG  LMPN+GYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]
BLAST of Sed0021337 vs. ExPASy Swiss-Prot
Match: P62910 (60S ribosomal protein L32 OS=Homo sapiens OX=9606 GN=RPL32 PE=1 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 4.3e-44
Identity = 87/130 (66.92%), Postives = 111/130 (85.38%), Query Frame = 0 

Query: 4   PLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGTDKK 63
           PL+  KIVKKRT KF R Q DR + +K +WR+P+GID+RVRR+FKG  LMPN+GYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]
BLAST of Sed0021337 vs. ExPASy Swiss-Prot
Match: Q76KA3 (60S ribosomal protein L32 OS=Macaca fascicularis OX=9541 GN=RPL32 PE=2 SV=3)

HSP 1 Score: 178.7 bits (452), Expect = 4.3e-44
Identity = 87/130 (66.92%), Postives = 111/130 (85.38%), Query Frame = 0 

Query: 4   PLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGTDKK 63
           PL+  KIVKKRT KF R Q DR + +K +WR+P+GID+RVRR+FKG  LMPN+GYG++KK
Sbjct: 6   PLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKK 65

Query: 64  TRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVVTNK 123
           T+H LP+GF+KF+VHNVKELE+L+M N++YCAEIAH+VS+K RK IVERAAQL + VTN 
Sbjct: 66  TKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNP 125

Query: 124 LARLRSQEDE 134
            ARLRS+E+E
Sbjct: 126 NARLRSEENE 135

[Close]
BLAST of Sed0021337 vs. ExPASy TrEMBL
Match: A0A6J1KGP3 (60S ribosomal protein L32-1 OS=Cucurbita maxima OX=3661 GN=LOC111495610 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.0e-64
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLL+KKIVKKRT KFKRPQ DR+I VKESWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Sed0021337 vs. ExPASy TrEMBL
Match: A0A6J1EP15 (60S ribosomal protein L32-1 OS=Cucurbita moschata OX=3662 GN=LOC111434287 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.0e-64
Identity = 126/133 (94.74%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLL+KKIVKKRT KFKRPQ DR+I VKESWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLSKKIVKKRTQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEILMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Sed0021337 vs. ExPASy TrEMBL
Match: A0A6J1K6F1 (60S ribosomal protein L32-1-like OS=Cucurbita maxima OX=3661 GN=LOC111490500 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.1e-64
Identity = 125/133 (93.98%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKKIVKKRT KFKRPQ DR+I VKE+WRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Sed0021337 vs. ExPASy TrEMBL
Match: A0A6J1GUI9 (60S ribosomal protein L32-1-like OS=Cucurbita moschata OX=3662 GN=LOC111457242 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 5.1e-64
Identity = 125/133 (93.98%), Postives = 130/133 (97.74%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKKIVKKRT KFKRPQ DR+I VKE+WRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Sed0021337 vs. ExPASy TrEMBL
Match: A0A6J1CF23 (60S ribosomal protein L32-1 OS=Momordica charantia OX=3673 GN=LOC111010921 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63
Identity = 125/133 (93.98%), Postives = 129/133 (96.99%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKKIVKKR  KFKRPQ DR+I VKESWRRPKGIDSRVRRKFKGCTLMPN+GYGT
Sbjct: 1   MAVPLLTKKIVKKRAQKFKRPQSDRKISVKESWRRPKGIDSRVRRKFKGCTLMPNIGYGT 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHDVST+KRKEIVERAAQLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVSTRKRKEIVERAAQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TNKLARLRSQEDE
Sbjct: 121 TNKLARLRSQEDE 133

[Close]
BLAST of Sed0021337 vs. TAIR 10
Match: AT4G18100.1 (Ribosomal protein L32e )

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-63
Identity = 120/133 (90.23%), Postives = 126/133 (94.74%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKK+VKKR+AKF RPQ DRRI VKESWRRPKGIDSRVRRKFKG TLMPNVGYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKFVVHN  ELELLMMHNRTYCAEIAH+VSTKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           TN+LARLRSQEDE
Sbjct: 121 TNRLARLRSQEDE 133

[Close]
BLAST of Sed0021337 vs. TAIR 10
Match: AT5G46430.1 (Ribosomal protein L32e )

HSP 1 Score: 236.9 bits (603), Expect = 9.5e-63
Identity = 117/133 (87.97%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKK+VKKR+AKF RPQ DRRI VKESWRRPKGIDSRVRRKFKG TLMPNVGYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN  ELELLMMHNRTYCAEIAH++STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

[Close]
BLAST of Sed0021337 vs. TAIR 10
Match: AT5G46430.2 (Ribosomal protein L32e )

HSP 1 Score: 236.9 bits (603), Expect = 9.5e-63
Identity = 117/133 (87.97%), Postives = 125/133 (93.98%), Query Frame = 0 

Query: 1   MAVPLLTKKIVKKRTAKFKRPQHDRRICVKESWRRPKGIDSRVRRKFKGCTLMPNVGYGT 60
           MAVPLLTKK+VKKR+AKF RPQ DRRI VKESWRRPKGIDSRVRRKFKG TLMPNVGYG+
Sbjct: 1   MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGS 60

Query: 61  DKKTRHYLPNGFKKFVVHNVKELELLMMHNRTYCAEIAHDVSTKKRKEIVERAAQLDVVV 120
           DKKTRHYLPNGFKKF+VHN  ELELLMMHNRTYCAEIAH++STKKRK IVERA+QLDVVV
Sbjct: 61  DKKTRHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVV 120

Query: 121 TNKLARLRSQEDE 134
           +NKL RLRSQEDE
Sbjct: 121 SNKLGRLRSQEDE 133

The following BLAST results are available for this feature:
BLAST of Sed0021337 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6573344.14.7e-6494.7460S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_022927470.16.1e-6494.7460S ribosomal protein L32-1 [Cucurbita moschata] >XP_022927471.1 60S ribosomal p... [more]
XP_023542869.16.1e-6493.9860S ribosomal protein L32-1 [Cucurbita pepo subsp. pepo][more]
XP_023519489.18.0e-6493.9860S ribosomal protein L32-1-like [Cucurbita pepo subsp. pepo] >XP_023519490.1 60... [more]
XP_038894346.18.0e-6494.7460S ribosomal protein L32-1 [Benincasa hispida][more]
BLAST of Sed0021337 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P492112.1e-6290.2360S ribosomal protein L32-1 OS=Arabidopsis thaliana OX=3702 GN=RPL32A PE=2 SV=2[more]
Q9FHG21.3e-6187.9760S ribosomal protein L32-2 OS=Arabidopsis thaliana OX=3702 GN=RPL32B PE=2 SV=1[more]
E2RKA84.3e-4466.9260S ribosomal protein L32 OS=Canis lupus familiaris OX=9615 GN=RPL32 PE=1 SV=1[more]
P629104.3e-4466.9260S ribosomal protein L32 OS=Homo sapiens OX=9606 GN=RPL32 PE=1 SV=2[more]
Q76KA34.3e-4466.9260S ribosomal protein L32 OS=Macaca fascicularis OX=9541 GN=RPL32 PE=2 SV=3[more]
BLAST of Sed0021337 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KGP33.0e-6494.7460S ribosomal protein L32-1 OS=Cucurbita maxima OX=3661 GN=LOC111495610 PE=3 SV=... [more]
A0A6J1EP153.0e-6494.7460S ribosomal protein L32-1 OS=Cucurbita moschata OX=3662 GN=LOC111434287 PE=3 S... [more]
A0A6J1K6F15.1e-6493.9860S ribosomal protein L32-1-like OS=Cucurbita maxima OX=3661 GN=LOC111490500 PE=... [more]
A0A6J1GUI95.1e-6493.9860S ribosomal protein L32-1-like OS=Cucurbita moschata OX=3662 GN=LOC111457242 P... [more]
A0A6J1CF231.1e-6393.9860S ribosomal protein L32-1 OS=Momordica charantia OX=3673 GN=LOC111010921 PE=3 ... [more]
BLAST of Sed0021337 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G18100.11.5e-6390.23Ribosomal protein L32e [more]
AT5G46430.19.5e-6387.97Ribosomal protein L32e [more]
AT5G46430.29.5e-6387.97Ribosomal protein L32e [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001515Ribosomal protein L32eSMARTSM01393Ribosomal_L32e_2coord: 15..122
e-value: 3.8E-71
score: 252.4
IPR001515Ribosomal protein L32ePFAMPF01655Ribosomal_L32ecoord: 15..122
e-value: 1.3E-48
score: 163.8
IPR001515Ribosomal protein L32ePANTHERPTHR2341360S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT Ncoord: 1..133
IPR001515Ribosomal protein L32eCDDcd00513Ribosomal_L32_L32ecoord: 17..122
e-value: 1.89534E-57
score: 171.944
NoneNo IPR availablePANTHERPTHR23413:SF1360S RIBOSOMAL PROTEIN L32-1-RELATEDcoord: 1..133
IPR036351Ribosomal protein L32e superfamilySUPERFAMILY52042Ribosomal protein L32ecoord: 2..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0021337.1Sed0021337.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome