Sed0021259 (gene) Chayote v1

Overview
NameSed0021259
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG08: 33705566 .. 33706726 (+)
RNA-Seq ExpressionSed0021259
SyntenySed0021259
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCGGCTAAAAAAACTTTTCTACATAATTAGGAACAAAAAACAGAGAAAAAACAAATCCCTCGACCCTGACTTGGCAGACCGGAAAGGTAAGAAAAAACAAGTGTCAAAGTTCACCTACACATAATCCGGCTCGGATCAAGTCCGAACCAGAGCACGAAAAACCGTCGATCATTCAACTTTTTCGAAACCCCACAGCCTTCAATTCAAAGAATCTCTGCCGTACGATGGTTCGTCCATCATGGATGTACAACGTGTACACCAATTCCCGCGTTCCACCGAAGTATTTCCCAGCGCCATGCATTGCCATTTGCATCGTTCCGAATCCCCACTCGCACCTTCTCCACACGCGCTACCACGCTCAAACACTTCAATAAAATCTCTGCAACTTTTTGCTACTCAGTCCTTACGAATCTTTCTCATTTTTTTTCGCTCCGATGAAGAAGCTCCACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGCCGGTCATCTACGACCAACTCTCGTTTCTCCCCGCCGCCGTCCTCACCCTCGCGGCGGCGCTCTCCCCCGGCGACCGACAGGTTTTGGCTTACCTCATCTCCTCCGCCGTCAACAACTTCTCCGACCACCGCGGCAAGGCCGCCCAACAGAAAGCCCCCGCCGCAAATGGCGGCTCCGATCACCCGCCGGCTTCCTCCTGCGGCTGTTTCCGGTGCTACACGAGCTACTGGGTCCGATGGGACTCGTCTCCGAATCGGCAGCTTATTCACGCAATCATCGACGCTTATGAGGAGAAGTTGGCGGAGACGAAAGCCGGCAAGAGCAATAAGAAGGAAAGGAAGAAGAGGGGTTCCGGGTCGGGTCCGAGTTCGAATGTAGAAGAGGCGGAGATGGGGGCGGCGGTAAACGGCGGCGAGAAAGAGGCGGAGAAAGGGCCGGTGAGGTGGATAGTGAGTTTCATAGGGGAAAGAATCTGGGGTGGCTGGGATTATTGAAGATTAACTTGGAAAGTTTTCTGTTAATTAATTATTAATTAATTACTTCCATTAATTATGGAGGAAATGGAAGAAGAAAGAAAAAGCTCATCTTATTGTTCTTCATCTTTTGATTCTGGTTGTTAGTTGTAAATAGTTCTTATGCTTTGCATGTATAAATTAATCAATAGTTTTTCAAGTTGGG

mRNA sequence

GCGGCTAAAAAAACTTTTCTACATAATTAGGAACAAAAAACAGAGAAAAAACAAATCCCTCGACCCTGACTTGGCAGACCGGAAAGGTAAGAAAAAACAAGTGTCAAAGTTCACCTACACATAATCCGGCTCGGATCAAGTCCGAACCAGAGCACGAAAAACCGTCGATCATTCAACTTTTTCGAAACCCCACAGCCTTCAATTCAAAGAATCTCTGCCGTACGATGGTTCGTCCATCATGGATGTACAACGTGTACACCAATTCCCGCGTTCCACCGAAGTATTTCCCAGCGCCATGCATTGCCATTTGCATCGTTCCGAATCCCCACTCGCACCTTCTCCACACGCGCTACCACGCTCAAACACTTCAATAAAATCTCTGCAACTTTTTGCTACTCAGTCCTTACGAATCTTTCTCATTTTTTTTCGCTCCGATGAAGAAGCTCCACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGCCGGTCATCTACGACCAACTCTCGTTTCTCCCCGCCGCCGTCCTCACCCTCGCGGCGGCGCTCTCCCCCGGCGACCGACAGGTTTTGGCTTACCTCATCTCCTCCGCCGTCAACAACTTCTCCGACCACCGCGGCAAGGCCGCCCAACAGAAAGCCCCCGCCGCAAATGGCGGCTCCGATCACCCGCCGGCTTCCTCCTGCGGCTGTTTCCGGTGCTACACGAGCTACTGGGTCCGATGGGACTCGTCTCCGAATCGGCAGCTTATTCACGCAATCATCGACGCTTATGAGGAGAAGTTGGCGGAGACGAAAGCCGGCAAGAGCAATAAGAAGGAAAGGAAGAAGAGGGGTTCCGGGTCGGGTCCGAGTTCGAATGTAGAAGAGGCGGAGATGGGGGCGGCGGTAAACGGCGGCGAGAAAGAGGCGGAGAAAGGGCCGGTGAGGTGGATAGTGAGTTTCATAGGGGAAAGAATCTGGGGTGGCTGGGATTATTGAAGATTAACTTGGAAAGTTTTCTGTTAATTAATTATTAATTAATTACTTCCATTAATTATGGAGGAAATGGAAGAAGAAAGAAAAAGCTCATCTTATTGTTCTTCATCTTTTGATTCTGGTTGTTAGTTGTAAATAGTTCTTATGCTTTGCATGTATAAATTAATCAATAGTTTTTCAAGTTGGG

Coding sequence (CDS)

ATGAAGAAGCTCCACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGCCGGTCATCTACGACCAACTCTCGTTTCTCCCCGCCGCCGTCCTCACCCTCGCGGCGGCGCTCTCCCCCGGCGACCGACAGGTTTTGGCTTACCTCATCTCCTCCGCCGTCAACAACTTCTCCGACCACCGCGGCAAGGCCGCCCAACAGAAAGCCCCCGCCGCAAATGGCGGCTCCGATCACCCGCCGGCTTCCTCCTGCGGCTGTTTCCGGTGCTACACGAGCTACTGGGTCCGATGGGACTCGTCTCCGAATCGGCAGCTTATTCACGCAATCATCGACGCTTATGAGGAGAAGTTGGCGGAGACGAAAGCCGGCAAGAGCAATAAGAAGGAAAGGAAGAAGAGGGGTTCCGGGTCGGGTCCGAGTTCGAATGTAGAAGAGGCGGAGATGGGGGCGGCGGTAAACGGCGGCGAGAAAGAGGCGGAGAAAGGGCCGGTGAGGTGGATAGTGAGTTTCATAGGGGAAAGAATCTGGGGTGGCTGGGATTATTGA

Protein sequence

MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSGPSSNVEEAEMGAAVNGGEKEAEKGPVRWIVSFIGERIWGGWDY
Homology
BLAST of Sed0021259 vs. NCBI nr
Match: KAG7019402.1 (hypothetical protein SDJN02_18363, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.4 bits (651), Expect = 3.7e-64
Identity = 139/202 (68.81%), Postives = 154/202 (76.24%), Query Frame = 0

Query: 1   MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVN 60
           MKKL+R+RGTVHPS PP+I D LSFLP A+LTLAAALSP DR++LAYLISS       VN
Sbjct: 1   MKKLYRRRGTVHPS-PPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVN 60

Query: 61  NFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYEE 120
           NFS HRGKAA QK  AA  GSDHPP  SC CFRCYTSYWVRWDSSPNRQ+IH IIDAYEE
Sbjct: 61  NFSSHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEE 120

Query: 121 KLAETKAGKSNKKERKKRGSGSGPSS--------------NVEEA---EMGAAVNGGEKE 180
            LAE+KAGK+NKKERKKR +GSG  S               VEE+   EM AA +GGE E
Sbjct: 121 TLAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAA-DGGENE 180

BLAST of Sed0021259 vs. NCBI nr
Match: XP_022927395.1 (uncharacterized protein LOC111434229 [Cucurbita moschata] >KAG6583763.1 hypothetical protein SDJN03_19695, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255.0 bits (650), Expect = 4.9e-64
Identity = 139/202 (68.81%), Postives = 154/202 (76.24%), Query Frame = 0

Query: 1   MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVN 60
           MKKL+R+RGTVHPS PP+I D LSFLP A+LTLAAALSP DR++LAYLISS       VN
Sbjct: 1   MKKLYRRRGTVHPS-PPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVN 60

Query: 61  NFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYEE 120
           NFS HRGKAA QK  AA  GSDHPP  SC CFRCYTSYWVRWDSSPNRQ+IH IIDAYEE
Sbjct: 61  NFSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEE 120

Query: 121 KLAETKAGKSNKKERKKRGSGSGPSS--------------NVEEA---EMGAAVNGGEKE 180
            LAE+KAGK+NKKERKKR +GSG  S               VEE+   EM AA +GGE E
Sbjct: 121 TLAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAA-DGGENE 180

BLAST of Sed0021259 vs. NCBI nr
Match: XP_023001610.1 (uncharacterized protein LOC111495687 [Cucurbita maxima])

HSP 1 Score: 253.1 bits (645), Expect = 1.9e-63
Identity = 135/204 (66.18%), Postives = 148/204 (72.55%), Query Frame = 0

Query: 1   MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVN 60
           M KL+R+RGTVHPS PP+I D LSFLP A+LTLAAALSP DR++LAYLISS       VN
Sbjct: 1   MNKLYRRRGTVHPS-PPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVN 60

Query: 61  NFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYEE 120
           NFS HRGKAAQQK  AA  GSDHPPA SC CFRCYTSYWVRWDSSPNRQ+IH IIDAYEE
Sbjct: 61  NFSGHRGKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDAYEE 120

Query: 121 KLAETKAGKSNKKERKKRGSGSG-------------------PSSNVEEAEMGAAVNGGE 180
            LAE+KAGK+NKKERKKR +GSG                     S V E E      GGE
Sbjct: 121 TLAESKAGKNNKKERKKRNTGSGSGSVSSQGDGKGSELAPKVEESRVTEMEAADGGGGGE 180

BLAST of Sed0021259 vs. NCBI nr
Match: XP_023520004.1 (uncharacterized protein LOC111783314 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.9 bits (642), Expect = 4.1e-63
Identity = 134/204 (65.69%), Postives = 148/204 (72.55%), Query Frame = 0

Query: 1   MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVN 60
           MKKL+R+RGTVHPS PP+I D LSFLP A+LTLAAALSP DR++LAYLISS       VN
Sbjct: 1   MKKLYRRRGTVHPS-PPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVN 60

Query: 61  NFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYEE 120
           NFS HRGKAA QK  AA  GSDHPP  SC CFRCYTSYWVRWDSSPNRQ+IH IIDAYEE
Sbjct: 61  NFSGHRGKAAHQKPAAARSGSDHPPVFSCNCFRCYTSYWVRWDSSPNRQIIHEIIDAYEE 120

Query: 121 KLAETKAGKSNKKERKKRGSGSG-------------------PSSNVEEAEMGAAVNGGE 180
            LAE+KAGK++KKERKKR +GSG                     S V E E      GGE
Sbjct: 121 TLAESKAGKNSKKERKKRNTGSGSGSVSSPGDGKGSEVAPKVEESRVTEMEAADGGGGGE 180

BLAST of Sed0021259 vs. NCBI nr
Match: XP_038894832.1 (uncharacterized protein LOC120083238 [Benincasa hispida])

HSP 1 Score: 250.4 bits (638), Expect = 1.2e-62
Identity = 142/198 (71.72%), Postives = 152/198 (76.77%), Query Frame = 0

Query: 1   MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVN 60
           MKKL+RKRGTVHPS PP+I D LSFLP A+LTLAAALS  DR+VLAYLISS      AVN
Sbjct: 74  MKKLYRKRGTVHPS-PPIISDHLSFLPTAILTLAAALSLEDREVLAYLISSCSNDFTAVN 133

Query: 61  NFSDHRGKAAQQKAP-AANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYE 120
           N S+HRGKAA QK P AA GGSDHPPA SC CFRCYTSYWVRWDSSPNRQLIH IIDAYE
Sbjct: 134 NRSNHRGKAAHQKPPAAAKGGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQLIHEIIDAYE 193

Query: 121 EKLAETKAGKSNKKERKKRGSG--SGPSSN------VEEAEMGA----AVNGGEKEAEKG 180
           EKLAE+KAGK+NKKERKKR SG  SGP          EE E+      A  GGE+E EKG
Sbjct: 194 EKLAESKAGKNNKKERKKRNSGPVSGPGEGKRSEPAAEEEELRVTEREAAEGGEEETEKG 253

BLAST of Sed0021259 vs. ExPASy TrEMBL
Match: A0A6J1ENT0 (uncharacterized protein LOC111434229 OS=Cucurbita moschata OX=3662 GN=LOC111434229 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.4e-64
Identity = 139/202 (68.81%), Postives = 154/202 (76.24%), Query Frame = 0

Query: 1   MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVN 60
           MKKL+R+RGTVHPS PP+I D LSFLP A+LTLAAALSP DR++LAYLISS       VN
Sbjct: 1   MKKLYRRRGTVHPS-PPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVN 60

Query: 61  NFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYEE 120
           NFS HRGKAA QK  AA  GSDHPP  SC CFRCYTSYWVRWDSSPNRQ+IH IIDAYEE
Sbjct: 61  NFSGHRGKAAHQKPAAAKSGSDHPPVFSCDCFRCYTSYWVRWDSSPNRQMIHEIIDAYEE 120

Query: 121 KLAETKAGKSNKKERKKRGSGSGPSS--------------NVEEA---EMGAAVNGGEKE 180
            LAE+KAGK+NKKERKKR +GSG  S               VEE+   EM AA +GGE E
Sbjct: 121 TLAESKAGKNNKKERKKRNTGSGSGSVSSPGDGKGSELAPKVEESRVTEMEAA-DGGENE 180

BLAST of Sed0021259 vs. ExPASy TrEMBL
Match: A0A6J1KLN6 (uncharacterized protein LOC111495687 OS=Cucurbita maxima OX=3661 GN=LOC111495687 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 9.0e-64
Identity = 135/204 (66.18%), Postives = 148/204 (72.55%), Query Frame = 0

Query: 1   MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISS------AVN 60
           M KL+R+RGTVHPS PP+I D LSFLP A+LTLAAALSP DR++LAYLISS       VN
Sbjct: 1   MNKLYRRRGTVHPS-PPIISDHLSFLPTAILTLAAALSPEDREILAYLISSFSNDFTTVN 60

Query: 61  NFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYEE 120
           NFS HRGKAAQQK  AA  GSDHPPA SC CFRCYTSYWVRWDSSPNRQ+IH IIDAYEE
Sbjct: 61  NFSGHRGKAAQQKPAAAKSGSDHPPAFSCDCFRCYTSYWVRWDSSPNRQIIHEIIDAYEE 120

Query: 121 KLAETKAGKSNKKERKKRGSGSG-------------------PSSNVEEAEMGAAVNGGE 180
            LAE+KAGK+NKKERKKR +GSG                     S V E E      GGE
Sbjct: 121 TLAESKAGKNNKKERKKRNTGSGSGSVSSQGDGKGSELAPKVEESRVTEMEAADGGGGGE 180

BLAST of Sed0021259 vs. ExPASy TrEMBL
Match: A0A5D3CKA3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001180 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.1e-57
Identity = 127/193 (65.80%), Postives = 141/193 (73.06%), Query Frame = 0

Query: 1   MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNF---- 60
           MKKL+RK GTVHPS PP+I D LSFLP A+LTL++ALS  DR+VLAYLISS  N+F    
Sbjct: 1   MKKLYRKTGTVHPS-PPLISDHLSFLPTAILTLSSALSLQDREVLAYLISSCSNDFTPVH 60

Query: 61  --SDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYEE 120
             S HRGKAA  K  A   GSDHPPA SC CF+CYTSYWVRWDSSPNRQLIH IIDAYE+
Sbjct: 61  NSSTHRGKAAHHKHAAPMAGSDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYED 120

Query: 121 KLAETKAGKSNKKERKKRG-----SGSGPSSNVEEA---EMGAAVNGGEKEAEKGPVRWI 180
           KLAETK GK+NKKERKKR      SG G     E A   E      GGE+EAEKGPVR I
Sbjct: 121 KLAETKVGKNNKKERKKRNSSGTVSGPGEGKGAEAAAKVEEWKVTEGGEEEAEKGPVRRI 180

BLAST of Sed0021259 vs. ExPASy TrEMBL
Match: A0A6J1JYL3 (uncharacterized protein LOC111490045 OS=Cucurbita maxima OX=3661 GN=LOC111490045 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.1e-57
Identity = 125/191 (65.45%), Postives = 141/191 (73.82%), Query Frame = 0

Query: 1   MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNFSDHR 60
           MKK +R+RGTVHPSPP  I D LSFLPAA+LTLAAAL+  DR+VLAYLISSA  N+S HR
Sbjct: 10  MKKQYRRRGTVHPSPP--ISDHLSFLPAAILTLAAALTSEDREVLAYLISSADKNYSGHR 69

Query: 61  GKAAQQK---APAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYEEKLA 120
           GK++QQK    P+A  GSDHPP+ SCGCFRCYT YWVRWDSSPNR++IH II+AYEEKLA
Sbjct: 70  GKSSQQKLTTTPSAKVGSDHPPSFSCGCFRCYTRYWVRWDSSPNREVIHEIIEAYEEKLA 129

Query: 121 ETKAGKSNKKERKKRGSG----------SGPSSNVEEAEMGAAVNGGEKEAEKGPVRWIV 179
           ETK GK NKKERKKR  G           G  +  E A  G    GGE+ AEKG VR IV
Sbjct: 130 ETKTGKKNKKERKKRNEGIESEGRLIEEKGRLTESEAAGDGGGGGGGEEAAEKGAVRKIV 189

BLAST of Sed0021259 vs. ExPASy TrEMBL
Match: A0A1S3C9P0 (uncharacterized protein LOC103498228 OS=Cucumis melo OX=3656 GN=LOC103498228 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 8.1e-57
Identity = 127/193 (65.80%), Postives = 141/193 (73.06%), Query Frame = 0

Query: 1   MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNF---- 60
           MKKL+RK GTVHPS PP+I D LSFLP A+LTL++ALS  DR+VLAYLISS  N+F    
Sbjct: 1   MKKLYRKTGTVHPS-PPLISDHLSFLPTAILTLSSALSLQDREVLAYLISSCSNDFTPVH 60

Query: 61  --SDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYEE 120
             S HRGKAA  K  A   GSDHPPA SC CF+CYTSYWVRWDSSPNRQLIH IIDAYE+
Sbjct: 61  NSSTHRGKAAHHKHAAPMAGSDHPPAFSCYCFQCYTSYWVRWDSSPNRQLIHEIIDAYED 120

Query: 121 KLAETKAGKSNKKERKKRG-----SGSGPSSNVEEA---EMGAAVNGGEKEAEKGPVRWI 180
           KLAETK GK+NKKERKKR      SG G     E A   E      GGE+EAEKGPVR I
Sbjct: 121 KLAETKVGKNNKKERKKRNSSGTVSGPGEGKGAEAAAKVEEWKVTEGGEEEAEKGPVRRI 180

BLAST of Sed0021259 vs. TAIR 10
Match: AT1G12020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-32
Identity = 96/228 (42.11%), Postives = 122/228 (53.51%), Query Frame = 0

Query: 1   MKKLHRKRGTVHPSPPPVIYDQ--LSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNFSD 60
           MKKL+RK GTVHPSPP +  +   L+ LP A+ +LAA LSP DR+VLAYLIS+A  ++S 
Sbjct: 1   MKKLYRK-GTVHPSPPQIKSNDHLLTLLPVAIFSLAAVLSPEDREVLAYLISTA--SYSG 60

Query: 61  HRGKAAQQKAPAANGGS---DHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYEEK 120
            R   ++     A+  +   +H P   C CF CYTSYWVRWDSSP+RQLIH IIDA+E+ 
Sbjct: 61  ERNPTSRLNKTKAHKKALFDNHSPLFHCDCFSCYTSYWVRWDSSPSRQLIHEIIDAFEDS 120

Query: 121 LAETKAGKSN---KKERKKRG--------------------------------------- 179
           L + K  K N   KK+R+KR                                        
Sbjct: 121 LEKNKNKKKNVTGKKDRRKRSGKSSSLLASSSFSTDDSEIPSRLGESVVNSCPCTSSSEL 180

BLAST of Sed0021259 vs. TAIR 10
Match: AT1G62422.1 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 135.6 bits (340), Expect = 4.0e-32
Identity = 92/198 (46.46%), Postives = 112/198 (56.57%), Query Frame = 0

Query: 1   MKKLHRKRGTVHPSPPPVIYDQ---LSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNFS 60
           MKKL RK GTVHPSPPP I      LS LP A+L+L AALS  DR+VLAYLIS++ ++  
Sbjct: 1   MKKLCRK-GTVHPSPPPAIKTDEQFLSLLPVAILSLVAALSVEDREVLAYLISNSGDSNR 60

Query: 61  DHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYEEKLA 120
             R K  ++        + H P   C CF CYTSYWVRWD+SP RQLIH IIDAYE+ L 
Sbjct: 61  ISRLKKNKE-------DNHHSPLFLCDCFSCYTSYWVRWDTSPRRQLIHEIIDAYEDSL- 120

Query: 121 ETKAGKSNKKERKKRGSGSG-------------PSSNVE----EAEMGAAVNGGEKEAEK 179
             +  K  K  RK+ G  SG              SS+ E    ++E      G E E EK
Sbjct: 121 --EMKKKKKDRRKRSGKASGRVNSIGTSRLSELGSSSAEFAGGDSEKDGNCGGEEAEKEK 180

BLAST of Sed0021259 vs. TAIR 10
Match: AT5G13090.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 3.9e-19
Identity = 58/176 (32.95%), Postives = 90/176 (51.14%), Query Frame = 0

Query: 6   RKRGTVHPSPPPVIYDQ-------------------LSFLPAAVLTLAAALSPGDRQVLA 65
           +K+G V+PSPPP                        L  LPA +L L + LS  +R+VLA
Sbjct: 4   KKKGKVYPSPPPPPQSSSSSSSSNHLNEEDDDSLSVLKLLPATILVLVSVLSSEEREVLA 63

Query: 66  YLIS--SAVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQL 125
           YLI+  + +++  +   K   +K    +  +  PP   C CF CYT+YW RWDSSPNR+L
Sbjct: 64  YLITRGTTISDRGNSSSKNKTKKKSNKSSKNHKPPVFDCECFDCYTNYWFRWDSSPNREL 123

Query: 126 IHAIIDAYEEKLAETKAGKSNKKERKKRGSGSGPSSNVEEAEMGAAV-NGGEKEAE 160
           IH II+A+E    E  +   +K +R K+    G      +++    V + G+K+++
Sbjct: 124 IHEIIEAFENHHGEENSASRSKSKRGKKKEKPGRRVTDSDSKPALRVTDNGDKDSK 179

BLAST of Sed0021259 vs. TAIR 10
Match: AT1G24270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 2.4e-16
Identity = 55/136 (40.44%), Postives = 75/136 (55.15%), Query Frame = 0

Query: 7   KRGTVHPSPPPVIY------DQLS---FLPAAVLTLAAALSPGDRQVLAYLISSAVNNFS 66
           K+G VHPSPP          D LS    L +A+L L + LS  D +VLAYLI+ ++N  +
Sbjct: 59  KKGKVHPSPPLPSSSSSNGDDSLSVFKLLQSAILVLVSVLSAEDLEVLAYLITRSLNTTN 118

Query: 67  DHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYEEKLA 126
               K  +         S   P   C CF CYTSYW +WDSS NR+LI+ II+A+E+ L 
Sbjct: 119 VVSCKKKR---------SHKAPLLDCQCFDCYTSYWSKWDSSSNRELINQIIEAFEDHLT 178

Query: 127 --ETKAGKSNKKERKK 132
             E  A  ++KK +K+
Sbjct: 179 RDEISASHTSKKNKKR 185

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7019402.13.7e-6468.81hypothetical protein SDJN02_18363, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022927395.14.9e-6468.81uncharacterized protein LOC111434229 [Cucurbita moschata] >KAG6583763.1 hypothet... [more]
XP_023001610.11.9e-6366.18uncharacterized protein LOC111495687 [Cucurbita maxima][more]
XP_023520004.14.1e-6365.69uncharacterized protein LOC111783314 [Cucurbita pepo subsp. pepo][more]
XP_038894832.11.2e-6271.72uncharacterized protein LOC120083238 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1ENT02.4e-6468.81uncharacterized protein LOC111434229 OS=Cucurbita moschata OX=3662 GN=LOC1114342... [more]
A0A6J1KLN69.0e-6466.18uncharacterized protein LOC111495687 OS=Cucurbita maxima OX=3661 GN=LOC111495687... [more]
A0A5D3CKA38.1e-5765.80Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1JYL38.1e-5765.45uncharacterized protein LOC111490045 OS=Cucurbita maxima OX=3661 GN=LOC111490045... [more]
A0A1S3C9P08.1e-5765.80uncharacterized protein LOC103498228 OS=Cucumis melo OX=3656 GN=LOC103498228 PE=... [more]
Match NameE-valueIdentityDescription
AT1G12020.11.1e-3242.11unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G62422.14.0e-3246.46unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth ... [more]
AT5G13090.13.9e-1932.95unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G24270.12.4e-1640.44unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..129
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..79
NoneNo IPR availablePANTHERPTHR31903:SF6F12F1.11-RELATEDcoord: 1..178
NoneNo IPR availablePANTHERPTHR31903F12F1.11-RELATEDcoord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0021259.1Sed0021259.1mRNA