Sed0021259 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGGCTAAAAAAACTTTTCTACATAATTAGGAACAAAAAACAGAGAAAAAACAAATCCCTCGACCCTGACTTGGCAGACCGGAAAGGTAAGAAAAAACAAGTGTCAAAGTTCACCTACACATAATCCGGCTCGGATCAAGTCCGAACCAGAGCACGAAAAACCGTCGATCATTCAACTTTTTCGAAACCCCACAGCCTTCAATTCAAAGAATCTCTGCCGTACGATGGTTCGTCCATCATGGATGTACAACGTGTACACCAATTCCCGCGTTCCACCGAAGTATTTCCCAGCGCCATGCATTGCCATTTGCATCGTTCCGAATCCCCACTCGCACCTTCTCCACACGCGCTACCACGCTCAAACACTTCAATAAAATCTCTGCAACTTTTTGCTACTCAGTCCTTACGAATCTTTCTCATTTTTTTTCGCTCCGATGAAGAAGCTCCACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGCCGGTCATCTACGACCAACTCTCGTTTCTCCCCGCCGCCGTCCTCACCCTCGCGGCGGCGCTCTCCCCCGGCGACCGACAGGTTTTGGCTTACCTCATCTCCTCCGCCGTCAACAACTTCTCCGACCACCGCGGCAAGGCCGCCCAACAGAAAGCCCCCGCCGCAAATGGCGGCTCCGATCACCCGCCGGCTTCCTCCTGCGGCTGTTTCCGGTGCTACACGAGCTACTGGGTCCGATGGGACTCGTCTCCGAATCGGCAGCTTATTCACGCAATCATCGACGCTTATGAGGAGAAGTTGGCGGAGACGAAAGCCGGCAAGAGCAATAAGAAGGAAAGGAAGAAGAGGGGTTCCGGGTCGGGTCCGAGTTCGAATGTAGAAGAGGCGGAGATGGGGGCGGCGGTAAACGGCGGCGAGAAAGAGGCGGAGAAAGGGCCGGTGAGGTGGATAGTGAGTTTCATAGGGGAAAGAATCTGGGGTGGCTGGGATTATTGAAGATTAACTTGGAAAGTTTTCTGTTAATTAATTATTAATTAATTACTTCCATTAATTATGGAGGAAATGGAAGAAGAAAGAAAAAGCTCATCTTATTGTTCTTCATCTTTTGATTCTGGTTGTTAGTTGTAAATAGTTCTTATGCTTTGCATGTATAAATTAATCAATAGTTTTTCAAGTTGGG GCGGCTAAAAAAACTTTTCTACATAATTAGGAACAAAAAACAGAGAAAAAACAAATCCCTCGACCCTGACTTGGCAGACCGGAAAGGTAAGAAAAAACAAGTGTCAAAGTTCACCTACACATAATCCGGCTCGGATCAAGTCCGAACCAGAGCACGAAAAACCGTCGATCATTCAACTTTTTCGAAACCCCACAGCCTTCAATTCAAAGAATCTCTGCCGTACGATGGTTCGTCCATCATGGATGTACAACGTGTACACCAATTCCCGCGTTCCACCGAAGTATTTCCCAGCGCCATGCATTGCCATTTGCATCGTTCCGAATCCCCACTCGCACCTTCTCCACACGCGCTACCACGCTCAAACACTTCAATAAAATCTCTGCAACTTTTTGCTACTCAGTCCTTACGAATCTTTCTCATTTTTTTTCGCTCCGATGAAGAAGCTCCACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGCCGGTCATCTACGACCAACTCTCGTTTCTCCCCGCCGCCGTCCTCACCCTCGCGGCGGCGCTCTCCCCCGGCGACCGACAGGTTTTGGCTTACCTCATCTCCTCCGCCGTCAACAACTTCTCCGACCACCGCGGCAAGGCCGCCCAACAGAAAGCCCCCGCCGCAAATGGCGGCTCCGATCACCCGCCGGCTTCCTCCTGCGGCTGTTTCCGGTGCTACACGAGCTACTGGGTCCGATGGGACTCGTCTCCGAATCGGCAGCTTATTCACGCAATCATCGACGCTTATGAGGAGAAGTTGGCGGAGACGAAAGCCGGCAAGAGCAATAAGAAGGAAAGGAAGAAGAGGGGTTCCGGGTCGGGTCCGAGTTCGAATGTAGAAGAGGCGGAGATGGGGGCGGCGGTAAACGGCGGCGAGAAAGAGGCGGAGAAAGGGCCGGTGAGGTGGATAGTGAGTTTCATAGGGGAAAGAATCTGGGGTGGCTGGGATTATTGAAGATTAACTTGGAAAGTTTTCTGTTAATTAATTATTAATTAATTACTTCCATTAATTATGGAGGAAATGGAAGAAGAAAGAAAAAGCTCATCTTATTGTTCTTCATCTTTTGATTCTGGTTGTTAGTTGTAAATAGTTCTTATGCTTTGCATGTATAAATTAATCAATAGTTTTTCAAGTTGGG ATGAAGAAGCTCCACCGGAAAAGAGGAACGGTCCACCCATCGCCGCCGCCGGTCATCTACGACCAACTCTCGTTTCTCCCCGCCGCCGTCCTCACCCTCGCGGCGGCGCTCTCCCCCGGCGACCGACAGGTTTTGGCTTACCTCATCTCCTCCGCCGTCAACAACTTCTCCGACCACCGCGGCAAGGCCGCCCAACAGAAAGCCCCCGCCGCAAATGGCGGCTCCGATCACCCGCCGGCTTCCTCCTGCGGCTGTTTCCGGTGCTACACGAGCTACTGGGTCCGATGGGACTCGTCTCCGAATCGGCAGCTTATTCACGCAATCATCGACGCTTATGAGGAGAAGTTGGCGGAGACGAAAGCCGGCAAGAGCAATAAGAAGGAAAGGAAGAAGAGGGGTTCCGGGTCGGGTCCGAGTTCGAATGTAGAAGAGGCGGAGATGGGGGCGGCGGTAAACGGCGGCGAGAAAGAGGCGGAGAAAGGGCCGGTGAGGTGGATAGTGAGTTTCATAGGGGAAAGAATCTGGGGTGGCTGGGATTATTGA MKKLHRKRGTVHPSPPPVIYDQLSFLPAAVLTLAAALSPGDRQVLAYLISSAVNNFSDHRGKAAQQKAPAANGGSDHPPASSCGCFRCYTSYWVRWDSSPNRQLIHAIIDAYEEKLAETKAGKSNKKERKKRGSGSGPSSNVEEAEMGAAVNGGEKEAEKGPVRWIVSFIGERIWGGWDY Homology
BLAST of Sed0021259 vs. NCBI nr
Match: KAG7019402.1 (hypothetical protein SDJN02_18363, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 255.4 bits (651), Expect = 3.7e-64 Identity = 139/202 (68.81%), Postives = 154/202 (76.24%), Query Frame = 0
BLAST of Sed0021259 vs. NCBI nr
Match: XP_022927395.1 (uncharacterized protein LOC111434229 [Cucurbita moschata] >KAG6583763.1 hypothetical protein SDJN03_19695, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 255.0 bits (650), Expect = 4.9e-64 Identity = 139/202 (68.81%), Postives = 154/202 (76.24%), Query Frame = 0
BLAST of Sed0021259 vs. NCBI nr
Match: XP_023001610.1 (uncharacterized protein LOC111495687 [Cucurbita maxima]) HSP 1 Score: 253.1 bits (645), Expect = 1.9e-63 Identity = 135/204 (66.18%), Postives = 148/204 (72.55%), Query Frame = 0
BLAST of Sed0021259 vs. NCBI nr
Match: XP_023520004.1 (uncharacterized protein LOC111783314 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 251.9 bits (642), Expect = 4.1e-63 Identity = 134/204 (65.69%), Postives = 148/204 (72.55%), Query Frame = 0
BLAST of Sed0021259 vs. NCBI nr
Match: XP_038894832.1 (uncharacterized protein LOC120083238 [Benincasa hispida]) HSP 1 Score: 250.4 bits (638), Expect = 1.2e-62 Identity = 142/198 (71.72%), Postives = 152/198 (76.77%), Query Frame = 0
BLAST of Sed0021259 vs. ExPASy TrEMBL
Match: A0A6J1ENT0 (uncharacterized protein LOC111434229 OS=Cucurbita moschata OX=3662 GN=LOC111434229 PE=4 SV=1) HSP 1 Score: 255.0 bits (650), Expect = 2.4e-64 Identity = 139/202 (68.81%), Postives = 154/202 (76.24%), Query Frame = 0
BLAST of Sed0021259 vs. ExPASy TrEMBL
Match: A0A6J1KLN6 (uncharacterized protein LOC111495687 OS=Cucurbita maxima OX=3661 GN=LOC111495687 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 9.0e-64 Identity = 135/204 (66.18%), Postives = 148/204 (72.55%), Query Frame = 0
BLAST of Sed0021259 vs. ExPASy TrEMBL
Match: A0A5D3CKA3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001180 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 8.1e-57 Identity = 127/193 (65.80%), Postives = 141/193 (73.06%), Query Frame = 0
BLAST of Sed0021259 vs. ExPASy TrEMBL
Match: A0A6J1JYL3 (uncharacterized protein LOC111490045 OS=Cucurbita maxima OX=3661 GN=LOC111490045 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 8.1e-57 Identity = 125/191 (65.45%), Postives = 141/191 (73.82%), Query Frame = 0
BLAST of Sed0021259 vs. ExPASy TrEMBL
Match: A0A1S3C9P0 (uncharacterized protein LOC103498228 OS=Cucumis melo OX=3656 GN=LOC103498228 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 8.1e-57 Identity = 127/193 (65.80%), Postives = 141/193 (73.06%), Query Frame = 0
BLAST of Sed0021259 vs. TAIR 10
Match: AT1G12020.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G62422.1); Has 89 Blast hits to 88 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 137.5 bits (345), Expect = 1.1e-32 Identity = 96/228 (42.11%), Postives = 122/228 (53.51%), Query Frame = 0
BLAST of Sed0021259 vs. TAIR 10
Match: AT1G62422.1 (unknown protein; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12020.1); Has 87 Blast hits to 86 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 135.6 bits (340), Expect = 4.0e-32 Identity = 92/198 (46.46%), Postives = 112/198 (56.57%), Query Frame = 0
BLAST of Sed0021259 vs. TAIR 10
Match: AT5G13090.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 92.4 bits (228), Expect = 3.9e-19 Identity = 58/176 (32.95%), Postives = 90/176 (51.14%), Query Frame = 0
BLAST of Sed0021259 vs. TAIR 10
Match: AT1G24270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13090.1); Has 84 Blast hits to 83 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 83.2 bits (204), Expect = 2.4e-16 Identity = 55/136 (40.44%), Postives = 75/136 (55.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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