Sed0020981 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAACCCAGAAGTTTTTTAGTGCATCCATTGTTATTGTACTTGTATTTGCTTGCTTTATTTCATCAAGTATGTTCTTTTCTCACAACCCTAATCTACTTCAAATGTTTTTTTTAAAACAATATTATTTACAATGTTAATTCTTTGGTCATATGACAGCAAAAGGAGATATTGCAAAAGGAGATACATCAAAAACAGATATGTTCCTCAACTGTGTTCGACCATGTTCCGACACTTACGACGATGATTCATGCTATAACGATTGTCTTCGAGAGAACAACAATGCTGGATTTTGTTATCCCAAGCTATCTGATGTTACGACTGAAAAAGATTGTTGTTGCAATAATTAA ATGGCAACCCAGAAGTTTTTTAGTGCATCCATTGTTATTGTACTTGTATTTGCTTGCTTTATTTCATCAACAAAAGGAGATATTGCAAAAGGAGATACATCAAAAACAGATATGTTCCTCAACTGTGTTCGACCATGTTCCGACACTTACGACGATGATTCATGCTATAACGATTGTCTTCGAGAGAACAACAATGCTGGATTTTGTTATCCCAAGCTATCTGATGTTACGACTGAAAAAGATTGTTGTTGCAATAATTAA ATGGCAACCCAGAAGTTTTTTAGTGCATCCATTGTTATTGTACTTGTATTTGCTTGCTTTATTTCATCAACAAAAGGAGATATTGCAAAAGGAGATACATCAAAAACAGATATGTTCCTCAACTGTGTTCGACCATGTTCCGACACTTACGACGATGATTCATGCTATAACGATTGTCTTCGAGAGAACAACAATGCTGGATTTTGTTATCCCAAGCTATCTGATGTTACGACTGAAAAAGATTGTTGTTGCAATAATTAA MATQKFFSASIVIVLVFACFISSTKGDIAKGDTSKTDMFLNCVRPCSDTYDDDSCYNDCLRENNNAGFCYPKLSDVTTEKDCCCNN Homology
BLAST of Sed0020981 vs. NCBI nr
Match: KAE8651697.1 (hypothetical protein Csa_006343 [Cucumis sativus]) HSP 1 Score: 110.9 bits (276), Expect = 5.4e-21 Identity = 51/85 (60.00%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of Sed0020981 vs. NCBI nr
Match: KGN61228.1 (hypothetical protein Csa_006463 [Cucumis sativus]) HSP 1 Score: 108.6 bits (270), Expect = 2.7e-20 Identity = 50/85 (58.82%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of Sed0020981 vs. NCBI nr
Match: KAG6586428.1 (hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 100.9 bits (250), Expect = 5.6e-18 Identity = 46/86 (53.49%), Postives = 59/86 (68.60%), Query Frame = 0
BLAST of Sed0020981 vs. NCBI nr
Match: KAE8651701.1 (hypothetical protein Csa_006400, partial [Cucumis sativus]) HSP 1 Score: 84.7 bits (208), Expect = 4.2e-13 Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of Sed0020981 vs. NCBI nr
Match: KGN54497.1 (hypothetical protein Csa_012842 [Cucumis sativus]) HSP 1 Score: 72.4 bits (176), Expect = 2.1e-09 Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of Sed0020981 vs. ExPASy TrEMBL
Match: A0A0A0LHG9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G071930 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20 Identity = 50/85 (58.82%), Postives = 65/85 (76.47%), Query Frame = 0
BLAST of Sed0020981 vs. ExPASy TrEMBL
Match: A0A0A0LJG5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G072430 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.9e-20 Identity = 49/86 (56.98%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of Sed0020981 vs. ExPASy TrEMBL
Match: A0A0A0LKF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G070930 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 4.1e-14 Identity = 39/57 (68.42%), Postives = 46/57 (80.70%), Query Frame = 0
BLAST of Sed0020981 vs. ExPASy TrEMBL
Match: A0A0A0L1R8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G339000 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 1.0e-09 Identity = 36/86 (41.86%), Postives = 50/86 (58.14%), Query Frame = 0
BLAST of Sed0020981 vs. ExPASy TrEMBL
Match: A0A5A7TJH1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1167G00010 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 4.5e-05 Identity = 31/84 (36.90%), Postives = 42/84 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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