Sed0020833 (gene) Chayote v1

Overview


Name	Sed0020833
Type	gene
Organism	Sechium edule (Chayote v1)
Description	zinc finger protein ZAT4-like
Location	LG01: 69026498 .. 69027419 (+)
RNA-Seq Expression	Sed0020833
Synteny	Sed0020833

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTTGTTTTTCTCCCATTTTTGTTTTGGGGGAAGAATGCTTGTCACCTACTCCTCTTTAAGTTCCCAATCTCTTCTGTACTTTCATTCCCATTTCCCACAACAAAAAAGTAAGATCAAAACACACACAACAGATCTTTGATTTGATTTGATTTGATTTTGATATTCAGTCCCACAAATTCAACCTCTGTTCTACACTCTTCACCACTGTCAGAGCCCTGGGCAGCCACATGAAGCTCCACCACCCACCAACGGCGGCGCCACCACTTCCTCTGCCTTCCTCCTCCTCCCCCAACGATCTCCATTCCGATCCCATTTTCGACTTTGCCCTTCAAGATAAAGGGAGCGACACGGAATCCAAAAACCCATCTCGAAAACGGTCCAAACGGCGCCGGAAACAGCCGCCGGAACCGGCGAGCTCTGTTTCCGACACCTCGCCGGAGGAAGACCTCGCCATGTGCCTCATGATGCTGTCACGTGACCGGCGGATCGAGAATCAGAATCGAATCCCAAATCAGAAATTGGAGGGAATTAGAGGGAAGAAAAAGTGTGAGAAATGTGAAAAACAGTTCCGATCTTACAGAGCTCTGTTCAGCCATGGAAGTATCTGCCAGATGAAAACAGAGGTTGAAGAAAGTTGCAGAAATGGGGGAAATGGAAGAAGAAGGTTCAAATGCCCGTTTTGTTTAAAGGTGTTTGGATCTGGTCAAGCTCTTGGCGGCCATAAGAGATCTCATCTTGTAAATGGCTCTGTTTCTTTGAAACTGGAAATCAGTCTCATAGATCTCAACTTACCAGCTCCTCTTCAAGATGATCATTTCAGTGTAGTTTATGATTCTTGAGATCCTTCATCTTTTTGTTTTGATTTTGTTTCTTTTTTGTTATCAATTTGTTCAATTGCCAAATTTTATTCTCCCTGCCA

mRNA sequence

AATTTTGTTTTTCTCCCATTTTTGTTTTGGGGGAAGAATGCTTGTCACCTACTCCTCTTTAAGTTCCCAATCTCTTCTGTACTTTCATTCCCATTTCCCACAACAAAAAAGTAAGATCAAAACACACACAACAGATCTTTGATTTGATTTGATTTGATTTTGATATTCAGTCCCACAAATTCAACCTCTGTTCTACACTCTTCACCACTGTCAGAGCCCTGGGCAGCCACATGAAGCTCCACCACCCACCAACGGCGGCGCCACCACTTCCTCTGCCTTCCTCCTCCTCCCCCAACGATCTCCATTCCGATCCCATTTTCGACTTTGCCCTTCAAGATAAAGGGAGCGACACGGAATCCAAAAACCCATCTCGAAAACGGTCCAAACGGCGCCGGAAACAGCCGCCGGAACCGGCGAGCTCTGTTTCCGACACCTCGCCGGAGGAAGACCTCGCCATGTGCCTCATGATGCTGTCACGTGACCGGCGGATCGAGAATCAGAATCGAATCCCAAATCAGAAATTGGAGGGAATTAGAGGGAAGAAAAAGTGTGAGAAATGTGAAAAACAGTTCCGATCTTACAGAGCTCTGTTCAGCCATGGAAGTATCTGCCAGATGAAAACAGAGGTTGAAGAAAGTTGCAGAAATGGGGGAAATGGAAGAAGAAGGTTCAAATGCCCGTTTTGTTTAAAGGTGTTTGGATCTGGTCAAGCTCTTGGCGGCCATAAGAGATCTCATCTTGTAAATGGCTCTGTTTCTTTGAAACTGGAAATCAGTCTCATAGATCTCAACTTACCAGCTCCTCTTCAAGATGATCATTTCAGTGTAGTTTATGATTCTTGAGATCCTTCATCTTTTTGTTTTGATTTTGTTTCTTTTTTGTTATCAATTTGTTCAATTGCCAAATTTTATTCTCCCTGCCA

Coding sequence (CDS)

ATGAAGCTCCACCACCCACCAACGGCGGCGCCACCACTTCCTCTGCCTTCCTCCTCCTCCCCCAACGATCTCCATTCCGATCCCATTTTCGACTTTGCCCTTCAAGATAAAGGGAGCGACACGGAATCCAAAAACCCATCTCGAAAACGGTCCAAACGGCGCCGGAAACAGCCGCCGGAACCGGCGAGCTCTGTTTCCGACACCTCGCCGGAGGAAGACCTCGCCATGTGCCTCATGATGCTGTCACGTGACCGGCGGATCGAGAATCAGAATCGAATCCCAAATCAGAAATTGGAGGGAATTAGAGGGAAGAAAAAGTGTGAGAAATGTGAAAAACAGTTCCGATCTTACAGAGCTCTGTTCAGCCATGGAAGTATCTGCCAGATGAAAACAGAGGTTGAAGAAAGTTGCAGAAATGGGGGAAATGGAAGAAGAAGGTTCAAATGCCCGTTTTGTTTAAAGGTGTTTGGATCTGGTCAAGCTCTTGGCGGCCATAAGAGATCTCATCTTGTAAATGGCTCTGTTTCTTTGAAACTGGAAATCAGTCTCATAGATCTCAACTTACCAGCTCCTCTTCAAGATGATCATTTCAGTGTAGTTTATGATTCTTGA

Protein sequence

MKLHHPPTAAPPLPLPSSSSPNDLHSDPIFDFALQDKGSDTESKNPSRKRSKRRRKQPPEPASSVSDTSPEEDLAMCLMMLSRDRRIENQNRIPNQKLEGIRGKKKCEKCEKQFRSYRALFSHGSICQMKTEVEESCRNGGNGRRRFKCPFCLKVFGSGQALGGHKRSHLVNGSVSLKLEISLIDLNLPAPLQDDHFSVVYDS

Homology

[Close]

BLAST of Sed0020833 vs. NCBI nr
Match: XP_023532763.1 (zinc finger protein ZAT9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.6 bits (623), Expect = 7.4e-61
Identity = 135/209 (64.59%), Postives = 153/209 (73.21%), Query Frame = 0


Query: 26  SDPIFDFALQDKGSDTESKNPSRKRSKRRRKQP---PEPASSVSDTSPEEDLAMCLMMLS 85
           SDP+FD  LQD+ S+TESKNP+  RSKRRR+ P   PEPASSVS TSPEEDLAMCLMMLS
Sbjct: 101 SDPVFDIVLQDRESETESKNPTCNRSKRRRQPPLELPEPASSVSYTSPEEDLAMCLMMLS 160

Query: 86  RDRRIENQNRIPNQ-----KLEGIRGKKKCEKCEKQFRSYRALFSHGSICQMKTEVEES- 145
           RDRRI+NQN+IPNQ       + +R KKKC+KC K FRSYRALFSH  ICQ+KTE+EE  
Sbjct: 161 RDRRIQNQNQIPNQFEKIRAKKPLRRKKKCQKCTKHFRSYRALFSHEKICQLKTELEEEE 220

Query: 146 ----------------CRNGGNGRRRFKCPFCLKVFGSGQALGGHKRSHL---------V 201
                            +NGGN RR FKCPFC K+FGSGQALGGHKRSH          V
Sbjct: 221 EEEEEEEEEEEEEHEHFKNGGNRRRIFKCPFCFKLFGSGQALGGHKRSHFVSSTNGGVSV 280

[Close]

BLAST of Sed0020833 vs. NCBI nr
Match: KAG7036122.1 (Zinc finger protein ZAT4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242.7 bits (618), Expect = 2.8e-60
Identity = 133/206 (64.56%), Postives = 153/206 (74.27%), Query Frame = 0


Query: 26  SDPIFDFALQDKGSDTESKNPSRKRSKRRRK---QPPEPASSVSDTSPEEDLAMCLMMLS 85
           SDP+FD  LQD+ S+TESKNP+  RSKRRR+   +PPEPASSVS TSPEEDLAMCLMMLS
Sbjct: 81  SDPVFDIVLQDRESETESKNPTCNRSKRRRQPPLEPPEPASSVSYTSPEEDLAMCLMMLS 140

Query: 86  RDRRIENQNRIPNQ-----KLEGIRGKKKCEKCEKQFRSYRALFSHGSICQMKTEVEES- 145
           RD+RI+NQN+IPNQ       + +R KKKC+KC K FRSYRALFSH  ICQ+KTE+EE  
Sbjct: 141 RDQRIQNQNQIPNQFEKIRAKKPLRRKKKCQKCTKHFRSYRALFSHEKICQLKTELEEEE 200

Query: 146 -------------CRNGGNGRRRFKCPFCLKVFGSGQALGGHKRSHL---------VNGS 201
                         +NGGN RR FKCPFC K+FGSGQALGGHKRSH          VN S
Sbjct: 201 EEEEEEEEEKHEHFKNGGNRRRIFKCPFCFKLFGSGQALGGHKRSHFVSSTNGGVSVNSS 260

[Close]

BLAST of Sed0020833 vs. NCBI nr
Match: XP_022996407.1 (zinc finger protein ZAT4-like [Cucurbita maxima])

HSP 1 Score: 241.1 bits (614), Expect = 8.2e-60
Identity = 137/226 (60.62%), Postives = 162/226 (71.68%), Query Frame = 0


Query: 1   MKLHHPPTAAPPLPLPSSSSPNDLHSDPIFDFALQDKGSDTESKNPSRKRSKRRRK---Q 60
           ++  H PT       P++   N   SDP+FD  LQD+ S+T+S+NP+  RSKRRR+   +
Sbjct: 62  LESEHDPTLYEVRENPNT---NFRFSDPVFDIVLQDRESETDSRNPTCNRSKRRRQPPLE 121

Query: 61  PPEPASSVSDTSPEEDLAMCLMMLSRDRRIENQNRIPNQ-----KLEGIRGKKKCEKCEK 120
           PPEPASSVS TSPEEDLAMCLMMLSRDRRIENQN+IPNQ       + +R KKKC+KC K
Sbjct: 122 PPEPASSVSYTSPEEDLAMCLMMLSRDRRIENQNQIPNQFEKIRAKKPLRRKKKCQKCTK 181

Query: 121 QFRSYRALFSHGSICQMKTEVEES---------CRNGGNGRRRFKCPFCLKVFGSGQALG 180
            FRSYRALFSH  ICQ+KTE+EE           +NGGN RR FKCPFC K+FGSGQALG
Sbjct: 182 HFRSYRALFSHEKICQLKTELEEEEEEEEKQEHFKNGGNRRRIFKCPFCFKLFGSGQALG 241

Query: 181 GHKRSHL---------VNGSVSLKLEISLIDLNLPAPLQDDHFSVV 201
           GHKRSH          V+ SVSLK+EISLIDLNLPAPL++D +SVV
Sbjct: 242 GHKRSHFVSSTNGGVSVDSSVSLKMEISLIDLNLPAPLEEDDYSVV 284

[Close]

BLAST of Sed0020833 vs. NCBI nr
Match: XP_022958343.1 (zinc finger protein ZAT4-like [Cucurbita moschata])

HSP 1 Score: 240.7 bits (613), Expect = 1.1e-59
Identity = 137/224 (61.16%), Postives = 161/224 (71.88%), Query Frame = 0


Query: 1   MKLHHPPTAAPPLPLPSSSSPNDLHSDPIFDFALQDKGSDTESKNPSRKRSKRRRK---Q 60
           ++  H PT       P++   N   SDP+FD  LQD+ S+TESKNP+  RSKRRR+   +
Sbjct: 59  LESEHNPTLYEARENPNT---NFRFSDPVFDIVLQDRESETESKNPTCNRSKRRRQPPLE 118

Query: 61  PPEPASSVSDTSPEEDLAMCLMMLSRDRRIENQNRIPNQ-----KLEGIRGKKKCEKCEK 120
           PPEPASSVS TSPEEDLAMCLMMLSRD+RI+NQN+ PNQ       + +R KKKC+KC K
Sbjct: 119 PPEPASSVSYTSPEEDLAMCLMMLSRDQRIQNQNQSPNQFEKNRAKKPLRRKKKCQKCTK 178

Query: 121 QFRSYRALFSHGSICQMKTEVEES-------CRNGGNGRRRFKCPFCLKVFGSGQALGGH 180
            FRSYRALFSH  ICQ+KTE+EE         +NGGN RR FKCPFC K+FGSGQALGGH
Sbjct: 179 HFRSYRALFSHEKICQLKTELEEEEEEEHEHFKNGGNRRRIFKCPFCFKLFGSGQALGGH 238

Query: 181 KRSHL---------VNGSVSLKLEISLIDLNLPAPLQDDHFSVV 201
           KRSH          VN SVSLK+EISLIDLNLPAPL++D +SVV
Sbjct: 239 KRSHFVSSTNGGVSVNSSVSLKVEISLIDLNLPAPLEEDDYSVV 279

[Close]

BLAST of Sed0020833 vs. NCBI nr
Match: XP_038875408.1 (zinc finger protein ZAT9 [Benincasa hispida])

HSP 1 Score: 235.7 bits (600), Expect = 3.5e-58
Identity = 139/222 (62.61%), Postives = 163/222 (73.42%), Query Frame = 0


Query: 3   LHHPPTAAPPL-PLPSSSSPNDLHSDPIFDFALQDKGSDTESKNPSRKRSKRRRKQP--- 62
           L  PP   P L  L  +   N   SDP+F+  LQD+ S+TESKNP+RKRSKR RKQP   
Sbjct: 55  LQFPPEDKPTLYELRENPKKNFRFSDPVFNIVLQDRESETESKNPTRKRSKRWRKQPLTE 114

Query: 63  PEPASSVSDTSPEEDLAMCLMMLSRDRRIENQNRIPN--------QKLEGIRGKKKCEKC 122
            EPASSVSD SPEEDLA+CLMMLSRD+ I+NQN+  +        +  +GIR KKKCEKC
Sbjct: 115 AEPASSVSDASPEEDLALCLMMLSRDQWIKNQNQKRSFEELGSKIKVKKGIRRKKKCEKC 174

Query: 123 EKQFRSYRALFSHGSICQMKT------EVEESCRNGGNGRRRFKCPFCLKVFGSGQALGG 182
           +KQFRSYRALFSH  ICQ++T      E EES +N GN RR FKCPFC K+FGSGQALGG
Sbjct: 175 KKQFRSYRALFSHEKICQLETEQEQEQEQEESLKNDGN-RRIFKCPFCYKLFGSGQALGG 234

Query: 183 HKRSHLV---NGSVSLKLEISLIDLNLPAPLQDDHFSVVYDS 204
           HKRSHLV   N SVSLKL+ISLIDLNLPAPL++D +SVV ++
Sbjct: 235 HKRSHLVSSTNASVSLKLQISLIDLNLPAPLEEDDYSVVSEA 275

[Close]

BLAST of Sed0020833 vs. ExPASy Swiss-Prot
Match: Q9SHD0 (Zinc finger protein ZAT4 OS=Arabidopsis thaliana OX=3702 GN=ZAT4 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.6e-26
Identity = 96/237 (40.51%), Postives = 121/237 (51.05%), Query Frame = 0


Query: 22  NDLHSDPIFDFALQDK-GSDTESK--NPSRKRSKRRRK--------------QP------ 81
           N L  +  FDFA  D   S+TES   NP+R+RSKR RK              QP      
Sbjct: 76  NRLDDELEFDFAEDDDVESETESSRINPTRRRSKRTRKLGSFDFDFEKLTTSQPSELVAE 135

Query: 82  PEPASSVSDTSPEEDLAMCLMMLSRDR------------RIENQNRIPNQKLEGIRGKKK 141
           PE  SS SDT+ EEDLA CL+MLSRD+              E  +   + K    RG+ K
Sbjct: 136 PEHHSSASDTTTEEDLAFCLIMLSRDKWKQQKKKKQRVEEDETDHDSEDYKSSKSRGRFK 195

Query: 142 CEKCEKQFRSYRALFSH------GSICQMKTE-VEESCRNGGNGRRRFKCPFCLKVFGSG 201
           CE C K F+SY+AL  H         C  KTE VE     G   ++  +CP C +VF SG
Sbjct: 196 CETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKEKKVHECPICFRVFTSG 255

Query: 202 QALGGHKRSH----------LVNGSVSLKLEIS----LIDLNLPAPLQDDHFSVVYD 203
           QALGGHKRSH           V+  V ++ E+S    +IDLNLPAP ++D  S+V+D
Sbjct: 256 QALGGHKRSHGSNIGAGRGLSVSQIVQIEEEVSVKQRMIDLNLPAPNEEDETSLVFD 312

[Close]

BLAST of Sed0020833 vs. ExPASy Swiss-Prot
Match: Q9M202 (Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.2e-23
Identity = 93/237 (39.24%), Postives = 119/237 (50.21%), Query Frame = 0


Query: 26  SDPIFDFA----LQDKGSDTESK----NPSRKRSKRRRK---------------QPPE-- 85
           SDP F F     L+D  S++ES     N +RKRSKR RK                 PE  
Sbjct: 51  SDPKFAFTSSVLLEDGESESESSRNVINLTRKRSKRTRKLDSFVTKKVKTSQLGYKPESD 110

Query: 86  ---PASSVSDTSPEEDLAMCLMMLSRDRRIENQNR-------IPNQKLEG--------IR 145
              P SS SDT+ EEDLA CLMMLSRD+  +N++           ++ EG         +
Sbjct: 111 QEPPHSSASDTTTEEDLAFCLMMLSRDKWKKNKSNKEVVEEIETEEESEGYNKINRATTK 170

Query: 146 GKKKCEKCEKQFRSYRALFSH------GSICQMKTEVEESCRNGG---NGRRRFKCPFCL 202
           G+ KCE C K F+SY+AL  H        +   KTE              +R  +CP CL
Sbjct: 171 GRYKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRIHECPICL 230

[Close]

BLAST of Sed0020833 vs. ExPASy Swiss-Prot
Match: Q39092 (Zinc finger protein ZAT1 OS=Arabidopsis thaliana OX=3702 GN=ZAT1 PE=2 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.3e-20
Identity = 87/236 (36.86%), Postives = 121/236 (51.27%), Query Frame = 0


Query: 14  PLPSS-SSPNDLHSDPIFDFALQDKGSDTE-SKNPSRKRSKRRRKQ-------------- 73
           PLPS   S +   +DP   F LQD+ S+TE SK PSRKRS+  R+               
Sbjct: 32  PLPSQPESYSSSMADP--GFVLQDRESETESSKKPSRKRSRLNRRSISSLRHQQSNEEGK 91

Query: 74  ---------------------PPEPASSVSD-TSPEEDLAMCLMMLSRDRRIENQNRIPN 133
                                  EP SSVSD  + EED+A+ LM+LSRD+  + +     
Sbjct: 92  SETARAADIKIGVQELSESCTEQEPMSSVSDAATTEEDVALSLMLLSRDKWEKEEEESDE 151

Query: 134 QKLEGIRGK-KKCEKCEKQFRSYRALFSHGSICQMKTEVEESCRNGGNGRRRFK------ 193
           ++ +  R K  +CE CEK F+SY+AL  H +    K ++ E+ + G +  ++ K      
Sbjct: 152 ERWKKKRNKWFECETCEKVFKSYQALGGHRA--SHKKKIAETDQLGSDELKKKKKKSTSS 211

Query: 194 ---CPFCLKVFGSGQALGGHKRSHL-VNGSVSLK--LEISLIDLNLPAPLQDDHFS 199
              CP C KVF SGQALGGHKRSH   N   + +  + ISLIDLNLPAP +++  +
Sbjct: 212 HHECPICAKVFTSGQALGGHKRSHASANNEFTRRSGIIISLIDLNLPAPSEEEEMA 263

[Close]

BLAST of Sed0020833 vs. ExPASy Swiss-Prot
Match: Q9SSW2 (Zinc finger protein AZF2 OS=Arabidopsis thaliana OX=3702 GN=AZF2 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.2e-10
Identity = 64/196 (32.65%), Postives = 85/196 (43.37%), Query Frame = 0


Query: 48  RKRSKRRRKQPP----------EPASSVSDTSPEEDLAMCLMMLSRDR----RIENQNRI 107
           RKRSKR+R   P           P S   D + EE LA+CL+ML++D+    R   Q++ 
Sbjct: 35  RKRSKRQRSHSPSSSSSSPPRSRPKSQNQDLTEEEYLALCLLMLAKDQPSQTRFHQQSQS 94

Query: 108 PNQKLEGIRGKKKCEKCEKQFRSYRALFSHGSICQMK------TEVEESCRN-------- 167
                E      KC  CEK F SY+AL  H +  ++K      T  ++S           
Sbjct: 95  LTPPPESKNLPYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGE 154

Query: 168 ----GGNGRRRFKCPFCLKVFGSGQALGGHKRSHLV----------------NGSVSL-- 191
                 +G+   +C  C KVF +GQALGGHKR H                  +GSVS   
Sbjct: 155 KHPIAASGKIH-ECSICHKVFPTGQALGGHKRCHYEGNLGGGGGGGSKSISHSGSVSSTV 214

[Close]

BLAST of Sed0020833 vs. ExPASy Swiss-Prot
Match: Q42430 (Zinc finger protein 1 OS=Triticum aestivum OX=4565 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.4e-08
Identity = 48/154 (31.17%), Postives = 63/154 (40.91%), Query Frame = 0


Query: 48  RKRSKRRRKQPPEPASSVSDTSPEEDLAMCLMMLSRDRRIENQNRIPNQKLEGIRGKKKC 107
           RKRS+R+R             S EE+LA+CL+MLSR  +   Q   P      +  + KC
Sbjct: 46  RKRSRRQR-------------SEEENLALCLLMLSRGGKQRVQAPQPESFAAPVPAEFKC 105

Query: 108 EKCEKQFRSYRALFSHGSICQMKTEVEES----------------------------CRN 167
             C K F SY+AL  H +  ++K     S                              +
Sbjct: 106 SVCGKSFSSYQALGGHKTSHRVKQPSPPSDAAAAPLVALPAVAAILPSAEPATSSTAASS 165

Query: 168 GGNGRRRFKCPFCLKVFGSGQALGGHKRSHLVNG 174
            G   R  +C  C K F +GQALGGHKR H   G
Sbjct: 166 DGATNRVHRCSICQKEFPTGQALGGHKRKHYDGG 186

[Close]

BLAST of Sed0020833 vs. ExPASy TrEMBL
Match: A0A6J1K1T6 (zinc finger protein ZAT4-like OS=Cucurbita maxima OX=3661 GN=LOC111491641 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 4.0e-60
Identity = 137/226 (60.62%), Postives = 162/226 (71.68%), Query Frame = 0


Query: 1   MKLHHPPTAAPPLPLPSSSSPNDLHSDPIFDFALQDKGSDTESKNPSRKRSKRRRK---Q 60
           ++  H PT       P++   N   SDP+FD  LQD+ S+T+S+NP+  RSKRRR+   +
Sbjct: 62  LESEHDPTLYEVRENPNT---NFRFSDPVFDIVLQDRESETDSRNPTCNRSKRRRQPPLE 121

Query: 61  PPEPASSVSDTSPEEDLAMCLMMLSRDRRIENQNRIPNQ-----KLEGIRGKKKCEKCEK 120
           PPEPASSVS TSPEEDLAMCLMMLSRDRRIENQN+IPNQ       + +R KKKC+KC K
Sbjct: 122 PPEPASSVSYTSPEEDLAMCLMMLSRDRRIENQNQIPNQFEKIRAKKPLRRKKKCQKCTK 181

Query: 121 QFRSYRALFSHGSICQMKTEVEES---------CRNGGNGRRRFKCPFCLKVFGSGQALG 180
            FRSYRALFSH  ICQ+KTE+EE           +NGGN RR FKCPFC K+FGSGQALG
Sbjct: 182 HFRSYRALFSHEKICQLKTELEEEEEEEEKQEHFKNGGNRRRIFKCPFCFKLFGSGQALG 241

Query: 181 GHKRSHL---------VNGSVSLKLEISLIDLNLPAPLQDDHFSVV 201
           GHKRSH          V+ SVSLK+EISLIDLNLPAPL++D +SVV
Sbjct: 242 GHKRSHFVSSTNGGVSVDSSVSLKMEISLIDLNLPAPLEEDDYSVV 284

[Close]

BLAST of Sed0020833 vs. ExPASy TrEMBL
Match: A0A6J1H2V4 (zinc finger protein ZAT4-like OS=Cucurbita moschata OX=3662 GN=LOC111459591 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 5.2e-60
Identity = 137/224 (61.16%), Postives = 161/224 (71.88%), Query Frame = 0


Query: 1   MKLHHPPTAAPPLPLPSSSSPNDLHSDPIFDFALQDKGSDTESKNPSRKRSKRRRK---Q 60
           ++  H PT       P++   N   SDP+FD  LQD+ S+TESKNP+  RSKRRR+   +
Sbjct: 59  LESEHNPTLYEARENPNT---NFRFSDPVFDIVLQDRESETESKNPTCNRSKRRRQPPLE 118

Query: 61  PPEPASSVSDTSPEEDLAMCLMMLSRDRRIENQNRIPNQ-----KLEGIRGKKKCEKCEK 120
           PPEPASSVS TSPEEDLAMCLMMLSRD+RI+NQN+ PNQ       + +R KKKC+KC K
Sbjct: 119 PPEPASSVSYTSPEEDLAMCLMMLSRDQRIQNQNQSPNQFEKNRAKKPLRRKKKCQKCTK 178

Query: 121 QFRSYRALFSHGSICQMKTEVEES-------CRNGGNGRRRFKCPFCLKVFGSGQALGGH 180
            FRSYRALFSH  ICQ+KTE+EE         +NGGN RR FKCPFC K+FGSGQALGGH
Sbjct: 179 HFRSYRALFSHEKICQLKTELEEEEEEEHEHFKNGGNRRRIFKCPFCFKLFGSGQALGGH 238

Query: 181 KRSHL---------VNGSVSLKLEISLIDLNLPAPLQDDHFSVV 201
           KRSH          VN SVSLK+EISLIDLNLPAPL++D +SVV
Sbjct: 239 KRSHFVSSTNGGVSVNSSVSLKVEISLIDLNLPAPLEEDDYSVV 279

[Close]

BLAST of Sed0020833 vs. ExPASy TrEMBL
Match: A0A0A0KMX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162030 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 2.0e-56
Identity = 136/234 (58.12%), Postives = 158/234 (67.52%), Query Frame = 0


Query: 3   LHHPPTAAPPLPLPSSSSPND----------------LHSDPIFDFALQDKGSDTESKNP 62
           L  PP   PP P  SSSS +D                  SDP+F+  LQD+ S+TESKNP
Sbjct: 34  LPFPPPKPPPSPSSSSSSDHDESTLYELRGNSKGRNFRFSDPVFNIVLQDRESETESKNP 93

Query: 63  SRKRSKRRRKQ--PPEPASSVSDTSPEEDLAMCLMMLSRDRRIENQNRIPNQK------- 122
           +RKRSKR RK    PEPASSVSD SPEEDLA+CLMMLSRDR I+NQN    +        
Sbjct: 94  TRKRSKRWRKPEVEPEPASSVSDASPEEDLAVCLMMLSRDRWIKNQNHNERRSSFEELGS 153

Query: 123 ----LEGIRGKKKCEKCEKQFRSYRALFSHGSICQMKTEVEESCRNGGNGRRRFKCPFCL 182
                +GIR KKKCEKC++QFRSYRALFSH  ICQ + E E+     G+ RR FKCPFC 
Sbjct: 154 KIRVKKGIRRKKKCEKCKEQFRSYRALFSHEKICQSEQEEEQE----GSRRRIFKCPFCY 213

Query: 183 KVFGSGQALGGHKRSHLV----NGSVSLKLEISLIDLNLPAPLQDDHFSVVYDS 204
           K+FGSGQALGGHKRSHL+    N SVS KL+ISLIDLNLPAPL++D +SVV D+
Sbjct: 214 KLFGSGQALGGHKRSHLLSSTNNSSVSFKLQISLIDLNLPAPLEEDDYSVVSDA 263

[Close]

BLAST of Sed0020833 vs. ExPASy TrEMBL
Match: A0A1S3ATN8 (zinc finger protein ZAT9 OS=Cucumis melo OX=3656 GN=LOC103482608 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 5.9e-56
Identity = 140/243 (57.61%), Postives = 159/243 (65.43%), Query Frame = 0


Query: 1   MKLHHPPTAAPPLPLPSSSSPNDLH--------------------SDPIFDFALQDKGSD 60
           MK H     APP P PS SS    H                    SDP+F+  LQD+ S+
Sbjct: 23  MKAH---LTAPPKPPPSPSSSFSDHDESTLYELREENPKRGDFRFSDPVFNIVLQDRESE 82

Query: 61  TESKNPSRKRSKRRRKQ----PPEPASSVSDTSPEEDLAMCLMMLSRDRRIENQNRIPNQ 120
           TESKNP+RKRSKR RK       EPASSVSD SPEEDLA+CLMMLSRDR +E+QN+   +
Sbjct: 83  TESKNPTRKRSKRWRKPEVELEVEPASSVSDASPEEDLAICLMMLSRDRWVESQNQNEGR 142

Query: 121 K-----------LEGIRGKKKCEKCEKQFRSYRALFSHGSICQM-KTEVEESCRNGGNGR 180
                        +GIR KKKCEKC+KQFRSYRALFSH  ICQ  + E EE     GN R
Sbjct: 143 SWFEELGSKIKVKKGIRRKKKCEKCKKQFRSYRALFSHEKICQSEQEEEEEEEEEEGNRR 202

Query: 181 RRFKCPFCLKVFGSGQALGGHKRSHLV----NGSVSLKLEISLIDLNLPAPLQDDHFSVV 204
           R FKCPFC K+FGSGQALGGHKRSHLV    N SVSLKL+ISLIDLNLPAPL++D +SVV
Sbjct: 203 RIFKCPFCYKLFGSGQALGGHKRSHLVSTTNNSSVSLKLQISLIDLNLPAPLEEDDYSVV 262

[Close]

BLAST of Sed0020833 vs. ExPASy TrEMBL
Match: A0A5A7T8Z1 (Zinc finger protein ZAT9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold558G00520 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.0e-55
Identity = 139/244 (56.97%), Postives = 160/244 (65.57%), Query Frame = 0


Query: 1   MKLHHPPTAAPPLPLPSSSSPNDLH--------------------SDPIFDFALQDKGSD 60
           MK H     APP P PS SS    H                    SDP+F+  LQD+ S+
Sbjct: 23  MKAH---LTAPPKPPPSPSSSFSDHDESTLYELREENPKRGDFRFSDPVFNIVLQDRESE 82

Query: 61  TESKNPSRKRSKRRRK----QPPEPASSVSDTSPEEDLAMCLMMLSRDRRIENQNRIPNQ 120
           TESKNP+RKRSKR RK    +  EPASSVSD SPEEDLA+CLMMLSRDR +++QN+   +
Sbjct: 83  TESKNPTRKRSKRWRKPEVEREVEPASSVSDASPEEDLAICLMMLSRDRWVKSQNQNEGR 142

Query: 121 K-----------LEGIRGKKKCEKCEKQFRSYRALFSHGSICQ--MKTEVEESCRNGGNG 180
                        +GIR KKKCEKC+KQFRSYRALFSH  ICQ   + E EE     GN 
Sbjct: 143 SWFEELGSKIKVKKGIRRKKKCEKCKKQFRSYRALFSHEKICQSEQEQEQEEEEEEEGNR 202

Query: 181 RRRFKCPFCLKVFGSGQALGGHKRSHLV----NGSVSLKLEISLIDLNLPAPLQDDHFSV 204
           RR FKCPFC K+FGSGQALGGHKRSHLV    N SVSLKL+ISLIDLNLPAPL++D +SV
Sbjct: 203 RRIFKCPFCYKLFGSGQALGGHKRSHLVSTTNNSSVSLKLQISLIDLNLPAPLEEDDYSV 262

[Close]

BLAST of Sed0020833 vs. TAIR 10
Match: AT2G45120.1 (C2H2-like zinc finger protein )

HSP 1 Score: 119.8 bits (299), Expect = 2.6e-27
Identity = 96/237 (40.51%), Postives = 121/237 (51.05%), Query Frame = 0


Query: 22  NDLHSDPIFDFALQDK-GSDTESK--NPSRKRSKRRRK--------------QP------ 81
           N L  +  FDFA  D   S+TES   NP+R+RSKR RK              QP      
Sbjct: 76  NRLDDELEFDFAEDDDVESETESSRINPTRRRSKRTRKLGSFDFDFEKLTTSQPSELVAE 135

Query: 82  PEPASSVSDTSPEEDLAMCLMMLSRDR------------RIENQNRIPNQKLEGIRGKKK 141
           PE  SS SDT+ EEDLA CL+MLSRD+              E  +   + K    RG+ K
Sbjct: 136 PEHHSSASDTTTEEDLAFCLIMLSRDKWKQQKKKKQRVEEDETDHDSEDYKSSKSRGRFK 195

Query: 142 CEKCEKQFRSYRALFSH------GSICQMKTE-VEESCRNGGNGRRRFKCPFCLKVFGSG 201
           CE C K F+SY+AL  H         C  KTE VE     G   ++  +CP C +VF SG
Sbjct: 196 CETCGKVFKSYQALGGHRASHKKNKACMTKTEQVETEYVLGVKEKKVHECPICFRVFTSG 255

Query: 202 QALGGHKRSH----------LVNGSVSLKLEIS----LIDLNLPAPLQDDHFSVVYD 203
           QALGGHKRSH           V+  V ++ E+S    +IDLNLPAP ++D  S+V+D
Sbjct: 256 QALGGHKRSHGSNIGAGRGLSVSQIVQIEEEVSVKQRMIDLNLPAPNEEDETSLVFD 312

[Close]

BLAST of Sed0020833 vs. TAIR 10
Match: AT3G60580.1 (C2H2-like zinc finger protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-24
Identity = 93/237 (39.24%), Postives = 119/237 (50.21%), Query Frame = 0


Query: 26  SDPIFDFA----LQDKGSDTESK----NPSRKRSKRRRK---------------QPPE-- 85
           SDP F F     L+D  S++ES     N +RKRSKR RK                 PE  
Sbjct: 51  SDPKFAFTSSVLLEDGESESESSRNVINLTRKRSKRTRKLDSFVTKKVKTSQLGYKPESD 110

Query: 86  ---PASSVSDTSPEEDLAMCLMMLSRDRRIENQNR-------IPNQKLEG--------IR 145
              P SS SDT+ EEDLA CLMMLSRD+  +N++           ++ EG         +
Sbjct: 111 QEPPHSSASDTTTEEDLAFCLMMLSRDKWKKNKSNKEVVEEIETEEESEGYNKINRATTK 170

Query: 146 GKKKCEKCEKQFRSYRALFSH------GSICQMKTEVEESCRNGG---NGRRRFKCPFCL 202
           G+ KCE C K F+SY+AL  H        +   KTE              +R  +CP CL
Sbjct: 171 GRYKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRIHECPICL 230

[Close]

BLAST of Sed0020833 vs. TAIR 10
Match: AT1G02030.1 (C2H2-like zinc finger protein )

HSP 1 Score: 101.3 bits (251), Expect = 9.5e-22
Identity = 87/236 (36.86%), Postives = 121/236 (51.27%), Query Frame = 0


Query: 14  PLPSS-SSPNDLHSDPIFDFALQDKGSDTE-SKNPSRKRSKRRRKQ-------------- 73
           PLPS   S +   +DP   F LQD+ S+TE SK PSRKRS+  R+               
Sbjct: 32  PLPSQPESYSSSMADP--GFVLQDRESETESSKKPSRKRSRLNRRSISSLRHQQSNEEGK 91

Query: 74  ---------------------PPEPASSVSD-TSPEEDLAMCLMMLSRDRRIENQNRIPN 133
                                  EP SSVSD  + EED+A+ LM+LSRD+  + +     
Sbjct: 92  SETARAADIKIGVQELSESCTEQEPMSSVSDAATTEEDVALSLMLLSRDKWEKEEEESDE 151

Query: 134 QKLEGIRGK-KKCEKCEKQFRSYRALFSHGSICQMKTEVEESCRNGGNGRRRFK------ 193
           ++ +  R K  +CE CEK F+SY+AL  H +    K ++ E+ + G +  ++ K      
Sbjct: 152 ERWKKKRNKWFECETCEKVFKSYQALGGHRA--SHKKKIAETDQLGSDELKKKKKKSTSS 211

Query: 194 ---CPFCLKVFGSGQALGGHKRSHL-VNGSVSLK--LEISLIDLNLPAPLQDDHFS 199
              CP C KVF SGQALGGHKRSH   N   + +  + ISLIDLNLPAP +++  +
Sbjct: 212 HHECPICAKVFTSGQALGGHKRSHASANNEFTRRSGIIISLIDLNLPAPSEEEEMA 263

[Close]

BLAST of Sed0020833 vs. TAIR 10
Match: AT3G49930.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 69.7 bits (169), Expect = 3.1e-12
Identity = 63/198 (31.82%), Postives = 84/198 (42.42%), Query Frame = 0


Query: 15  LPSSSSPNDLHSDPIFDFALQDKGSDTESKNPSRKRSKRRRKQPPEPASSVSDTSPEEDL 74
           L S +S     + P F   L +   +       RKR+KR R   P P       S EE L
Sbjct: 6   LNSPTSTTTTTAPPPFLRCLDETEPENLESWTKRKRTKRHRIDQPNP-----PPSEEEYL 65

Query: 75  AMCLMMLSRDRRIENQNRIPNQKLEGIRGKK---KCEKCEKQFRSYRALFSHGSICQMKT 134
           A+CL+ML+R     +     +  L  +   +   KC  C K F SY+AL  H +  +   
Sbjct: 66  ALCLLMLARGSSDHHSPPSDHHSLSPLSDHQKDYKCSVCGKSFPSYQALGGHKTSHRKPV 125

Query: 135 EVEESCRNG-------------GNGRRRFKCPFCLKVFGSGQALGGHKRSHLVNGSVSLK 194
            V+ +  NG             G   +   C  C K F SGQALGGHKR H   G+ +  
Sbjct: 126 SVDVNNSNGTVTNNGNISNGLVGQSGKTHNCSICFKSFPSGQALGGHKRCHYDGGNGNSN 185

Query: 195 LEIS-LIDLNLPAPLQDD 196
            + S   DLNLPA    D
Sbjct: 186 GDNSHKFDLNLPADQVSD 198

[Close]

BLAST of Sed0020833 vs. TAIR 10
Match: AT3G19580.1 (zinc-finger protein 2 )

HSP 1 Score: 65.9 bits (159), Expect = 4.4e-11
Identity = 64/196 (32.65%), Postives = 85/196 (43.37%), Query Frame = 0


Query: 48  RKRSKRRRKQPP----------EPASSVSDTSPEEDLAMCLMMLSRDR----RIENQNRI 107
           RKRSKR+R   P           P S   D + EE LA+CL+ML++D+    R   Q++ 
Sbjct: 35  RKRSKRQRSHSPSSSSSSPPRSRPKSQNQDLTEEEYLALCLLMLAKDQPSQTRFHQQSQS 94

Query: 108 PNQKLEGIRGKKKCEKCEKQFRSYRALFSHGSICQMK------TEVEESCRN-------- 167
                E      KC  CEK F SY+AL  H +  ++K      T  ++S           
Sbjct: 95  LTPPPESKNLPYKCNVCEKAFPSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGE 154

Query: 168 ----GGNGRRRFKCPFCLKVFGSGQALGGHKRSHLV----------------NGSVSL-- 191
                 +G+   +C  C KVF +GQALGGHKR H                  +GSVS   
Sbjct: 155 KHPIAASGKIH-ECSICHKVFPTGQALGGHKRCHYEGNLGGGGGGGSKSISHSGSVSSTV 214

The following BLAST results are available for this feature:

BLAST of Sed0020833 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532763.1	7.4e-61	64.59	zinc finger protein ZAT9-like [Cucurbita pepo subsp. pepo]	[more]
KAG7036122.1	2.8e-60	64.56	Zinc finger protein ZAT4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022996407.1	8.2e-60	60.62	zinc finger protein ZAT4-like [Cucurbita maxima]	[more]
XP_022958343.1	1.1e-59	61.16	zinc finger protein ZAT4-like [Cucurbita moschata]	[more]
XP_038875408.1	3.5e-58	62.61	zinc finger protein ZAT9 [Benincasa hispida]	[more]

BLAST of Sed0020833 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHD0	3.6e-26	40.51	Zinc finger protein ZAT4 OS=Arabidopsis thaliana OX=3702 GN=ZAT4 PE=2 SV=1	[more]
Q9M202	2.2e-23	39.24	Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1	[more]
Q39092	1.3e-20	36.86	Zinc finger protein ZAT1 OS=Arabidopsis thaliana OX=3702 GN=ZAT1 PE=2 SV=1	[more]
Q9SSW2	6.2e-10	32.65	Zinc finger protein AZF2 OS=Arabidopsis thaliana OX=3702 GN=AZF2 PE=2 SV=1	[more]
Q42430	3.4e-08	31.17	Zinc finger protein 1 OS=Triticum aestivum OX=4565 PE=2 SV=1	[more]

BLAST of Sed0020833 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K1T6	4.0e-60	60.62	zinc finger protein ZAT4-like OS=Cucurbita maxima OX=3661 GN=LOC111491641 PE=4 S...	[more]
A0A6J1H2V4	5.2e-60	61.16	zinc finger protein ZAT4-like OS=Cucurbita moschata OX=3662 GN=LOC111459591 PE=4...	[more]
A0A0A0KMX8	2.0e-56	58.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162030 PE=4 SV=1	[more]
A0A1S3ATN8	5.9e-56	57.61	zinc finger protein ZAT9 OS=Cucumis melo OX=3656 GN=LOC103482608 PE=4 SV=1	[more]
A0A5A7T8Z1	1.0e-55	56.97	Zinc finger protein ZAT9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Sed0020833 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45120.1	2.6e-27	40.51	C2H2-like zinc finger protein	[more]
AT3G60580.1	1.6e-24	39.24	C2H2-like zinc finger protein	[more]
AT1G02030.1	9.5e-22	36.86	C2H2-like zinc finger protein	[more]
AT3G49930.1	3.1e-12	31.82	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G19580.1	4.4e-11	32.65	zinc-finger protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 80..174 e-value: 5.7E-7 score: 31.3
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 106..123 e-value: 0.013 score: 15.5 coord: 146..169 e-value: 1.4E-10 score: 40.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	PANTHER	PTHR46326:SF8	C2H2-LIKE ZINC FINGER PROTEIN	coord: 27..202
IPR044303	Zinc finger protein ZAT1/4/9	PANTHER	PTHR46326	ZINC FINGER PROTEIN ZAT1-RELATED	coord: 27..202
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 149..169
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 147..169 score: 9.535603
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 106..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020833.1	Sed0020833.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated