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Sed0020513 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTCTCAACGAAGATCGTTGAATCGTTAATTTTTCTGAATTTCTTGTTCTCTGTTCTTTGTGATTCAGAAATGGCGAAATCGAAGAATCACACAGCGCACAATCAATCCCGCAAAGCCCATAGGAATGGCATCAAGAAACCAAGGAACCACCGCCACACTTCCACTAAAGGAGTATGAAATTCATTTACACATTCAAATTTGTTCTTTTTAGATCCATTATGAATCGTTTTTCTTTTTGGAAACCTTCAAAATTAGTCAAATTTAGAATATAATGGCAAATATAGCCAATTTTAAAAAATTAGTAAATATAATTATGAGGATTTTGCATGCATAACAAAGAAGAGCAAAATATTTCTATTTACAGCACAAAATCAAAATTAATTCATTTAGTGCAAAAAATTCAAATTGAATTCTATCACTAATTGATTTCTATTAGGTGTTGCCCCCATTTAACCGATGTTTGTATTGGTTATCTAAACCTGCGGGTGCCCGTTTACCTAAATCTTATATATATTACTTTTTGTTACAGAACTAGCTCTTCGAACACCGTTTATCATAATCCCGGTTATAATAACTTGCTCCTCAAATACCATTTATCATAGCCCACCATTTATCATAACCTTCCGTCTATAATAACCAAACTGGTGCTCCAAATACACCCTTAGTGATAAAATTCAATCAATGATAGACTCATTCTATAATTGCTTGAATTTTTTTTATCAGCGATAGAAATACAAATTAAGTTCTATCCGTGGTTGATTGATAAAAATTAATGTGCTATAAATGAATTATTTTAAAAATTATGCCTCAAATATAATATTGCTATGGTAAATTCTCTATAATTATCGGGTATTGATAAAAAATATTAATTAATATTTATAATAAACATAATTGATCCAAATTTTTCCGCATTTGTAATTATTTTGTGAAATAGTCTATTCATTACATTTTTTTTTGTTCTGTTATTGTTTTTTATTTGTGTAGATGGATCCGAAGTTTCTTAGGAACCAGAGGTATGCGAAGAAACATAACAACAAGAGTGGGGAATCCGCGACTGAGGAAGAGTAAAGTAGAATTTCATGAATTGATTAATTTATGGTTTTTATGATATATGTTTGATTTTCTAATCAACACATTGTTTTCTCTGTAGTAGTTTTGTAATTTTGACTTTGTTGTAGTGAGTTTCATTTCAATGTTGAAAGCGTTAGATTCTGAATTCTTGTTACGATAATACATTATTGATTTGCAATTTTGGGGTTTTAGCTATTGGTTATATCTTCTAATATAATCATTTCTCTC CTTTCTCAACGAAGATCGTTGAATCGTTAATTTTTCTGAATTTCTTGTTCTCTGTTCTTTGTGATTCAGAAATGGCGAAATCGAAGAATCACACAGCGCACAATCAATCCCGCAAAGCCCATAGGAATGGCATCAAGAAACCAAGGAACCACCGCCACACTTCCACTAAAGGAATGGATCCGAAGTTTCTTAGGAACCAGAGGTATGCGAAGAAACATAACAACAAGAGTGGGGAATCCGCGACTGAGGAAGAGTAAAGTAGAATTTCATGAATTGATTAATTTATGGTTTTTATGATATATGTTTGATTTTCTAATCAACACATTGTTTTCTCTGTAGTAGTTTTGTAATTTTGACTTTGTTGTAGTGAGTTTCATTTCAATGTTGAAAGCGTTAGATTCTGAATTCTTGTTACGATAATACATTATTGATTTGCAATTTTGGGGTTTTAGCTATTGGTTATATCTTCTAATATAATCATTTCTCTC ATGGCGAAATCGAAGAATCACACAGCGCACAATCAATCCCGCAAAGCCCATAGGAATGGCATCAAGAAACCAAGGAACCACCGCCACACTTCCACTAAAGGAATGGATCCGAAGTTTCTTAGGAACCAGAGGTATGCGAAGAAACATAACAACAAGAGTGGGGAATCCGCGACTGAGGAAGAGTAA MAKSKNHTAHNQSRKAHRNGIKKPRNHRHTSTKGMDPKFLRNQRYAKKHNNKSGESATEEE Homology
BLAST of Sed0020513 vs. NCBI nr
Match: XP_023000056.1 (60S ribosomal protein L29-1-like [Cucurbita maxima] >KAG7026347.1 60S ribosomal protein L29-1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 115.2 bits (287), Expect = 2.0e-22 Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = 0
BLAST of Sed0020513 vs. NCBI nr
Match: XP_023000055.1 (60S ribosomal protein L29-1 [Cucurbita maxima] >XP_023514069.1 60S ribosomal protein L29-1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 114.0 bits (284), Expect = 4.6e-22 Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 0
BLAST of Sed0020513 vs. NCBI nr
Match: XP_023514068.1 (60S ribosomal protein L29-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 113.6 bits (283), Expect = 5.9e-22 Identity = 58/61 (95.08%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of Sed0020513 vs. NCBI nr
Match: XP_038875325.1 (60S ribosomal protein L29-1-like [Benincasa hispida]) HSP 1 Score: 112.8 bits (281), Expect = 1.0e-21 Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 0
BLAST of Sed0020513 vs. NCBI nr
Match: XP_038875270.1 (60S ribosomal protein L29-1 [Benincasa hispida]) HSP 1 Score: 112.8 bits (281), Expect = 1.0e-21 Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 0
BLAST of Sed0020513 vs. ExPASy Swiss-Prot
Match: Q9M7X7 (60S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.5e-20 Identity = 50/61 (81.97%), Postives = 56/61 (91.80%), Query Frame = 0
BLAST of Sed0020513 vs. ExPASy Swiss-Prot
Match: Q84WM0 (60S ribosomal protein L29-2 OS=Arabidopsis thaliana OX=3702 GN=RPL29B PE=3 SV=2) HSP 1 Score: 99.0 bits (245), Expect = 2.0e-20 Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 0
BLAST of Sed0020513 vs. ExPASy Swiss-Prot
Match: Q58DW3 (60S ribosomal protein L29 OS=Bos taurus OX=9913 GN=RPL29 PE=2 SV=3) HSP 1 Score: 80.5 bits (197), Expect = 7.3e-15 Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0
BLAST of Sed0020513 vs. ExPASy Swiss-Prot
Match: P47914 (60S ribosomal protein L29 OS=Homo sapiens OX=9606 GN=RPL29 PE=1 SV=2) HSP 1 Score: 80.5 bits (197), Expect = 7.3e-15 Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0
BLAST of Sed0020513 vs. ExPASy Swiss-Prot
Match: Q8HXB8 (60S ribosomal protein L29 OS=Macaca fascicularis OX=9541 GN=RPL29 PE=2 SV=3) HSP 1 Score: 80.5 bits (197), Expect = 7.3e-15 Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0
BLAST of Sed0020513 vs. ExPASy TrEMBL
Match: A0A6J1KET9 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494363 PE=3 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 9.9e-23 Identity = 59/61 (96.72%), Postives = 59/61 (96.72%), Query Frame = 0
BLAST of Sed0020513 vs. ExPASy TrEMBL
Match: A0A6J1KHA4 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494362 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.2e-22 Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 0
BLAST of Sed0020513 vs. ExPASy TrEMBL
Match: A0A6J1L4P4 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499112 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 6.4e-22 Identity = 57/61 (93.44%), Postives = 59/61 (96.72%), Query Frame = 0
BLAST of Sed0020513 vs. ExPASy TrEMBL
Match: A0A6J1H4N3 (60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460442 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 6.4e-22 Identity = 57/61 (93.44%), Postives = 59/61 (96.72%), Query Frame = 0
BLAST of Sed0020513 vs. ExPASy TrEMBL
Match: A0A6J1EUF7 (60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111436738 PE=3 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 6.4e-22 Identity = 57/60 (95.00%), Postives = 59/60 (98.33%), Query Frame = 0
BLAST of Sed0020513 vs. TAIR 10
Match: AT3G06700.1 (Ribosomal L29e protein family ) HSP 1 Score: 99.4 bits (246), Expect = 1.1e-21 Identity = 50/61 (81.97%), Postives = 56/61 (91.80%), Query Frame = 0
BLAST of Sed0020513 vs. TAIR 10
Match: AT3G06700.2 (Ribosomal L29e protein family ) HSP 1 Score: 99.4 bits (246), Expect = 1.1e-21 Identity = 50/61 (81.97%), Postives = 56/61 (91.80%), Query Frame = 0
BLAST of Sed0020513 vs. TAIR 10
Match: AT3G06700.3 (Ribosomal L29e protein family ) HSP 1 Score: 99.4 bits (246), Expect = 1.1e-21 Identity = 50/61 (81.97%), Postives = 56/61 (91.80%), Query Frame = 0
BLAST of Sed0020513 vs. TAIR 10
Match: AT3G06680.1 (Ribosomal L29e protein family ) HSP 1 Score: 99.0 bits (245), Expect = 1.4e-21 Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 0
BLAST of Sed0020513 vs. TAIR 10
Match: AT3G06680.2 (Ribosomal L29e protein family ) HSP 1 Score: 99.0 bits (245), Expect = 1.4e-21 Identity = 51/61 (83.61%), Postives = 55/61 (90.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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