Sed0020506 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAGAAACAATTAAATAAAGGAATCTCAATAGAGAACCCAAATAGAAATGGCTTATTATTTTTCAGCCACAACCAAAGCCAGTTTGTTCTTCTTCCTTATCCTTTCATGGTTGCATGTGAACCATAGCTCAAGCATTTCAAAGGACCCAGTTCCAACTCCATGGCCACACCAATTCCACTCCGTCGAGCTTGTAAACACTAGCGGAACTCTGCAGATAATCGAGCTCTGGTACGACTGGCCGAACGGTCGCAACTTCAACATCATCCAGCACCAGCTCGGCTACATCCTCTACGACCTCGAGTGGAACAATGGTACCACATTTTACTACACTCTAGAATCCAACACCTGCAATATCATCCAGTTCGACGTCGGCGTTCTACGACCCGACTGGCTCGACGGTGCCACTTATCTCGGGCAGCGCCATGTCGATGGCTTCCTCTGTAATGTATGGGAGAAGGTTGATTTCATTTGGTATTATGAGGATGTTGTCACCAAAAGGCCCGTTCACTGGGCCTTTTTCACTGGTAATTAAAACTCTTCACTTCAAATTTAGTTTACTTTGATTCTTTCTCTTATGTATTTCTTACTAAATGTTGGTTTAACTCAACCTCATTCATGGTATATATATATATATATATATATAATTTCTCTGTGTAAAATCAATGAAGTAACAGTATATGTTAGTAGAGTATCCACTAACAAGTTAGCTAGTCTTGGATCAAATTTAGAATTATAGAAAAAAAAAATGTTGAGAAGATAAACACGGTTGAGATTTGTGATGCCCTACAATTACTTTTCAGCGAGTGGAAGTCTCTTTGAATTGTTCCGTGTATAGGTTTTTATGTAATTTTGACTTATTTGTAATCGGGTTTAATGAAAGTGTATTATATAAATTCGAGTTATCTGTGGAGTAGCTATTGCATCGTTAGTGAACTATGTAAATTATGTGTTCTTCTGGCGCAAACTTTCGCGCACCTCGACTAATGTCACGAGGCATACCGCCTAACCTTACAACATTTTTTTTTTTAAACAAGGGTTAACCACGCCCGCCCCTAGGCTAGGCACCGAGACATCGAAGGAGTAATGTCACAGCTGAGTCTCAAACCTGGGAGCCTGGGACCTTGAGGGGAGCATACCCTCAAAGCCCAAGTCTTCAACCACTGTGTCATCCCTTGAGGACATGGATGGAACGCATCTATCTCAAAGTTTTCTTGACCATTAGAACAAATCATGATGGTTTAACTTCAATTCTTCTAATGGGATTCCACATTTTTTTACTGCATTAATTGAGCAGGAATGGAAGCCCATGTGATGACATTTGAAGTGGGAGCAGTGTTGGAGGATGAGAAATGGCAAGCCCCTCCTTATTGCTTTGATGGTAAGGCAACAATTGGTGTTCCAAATAATGGGATTCTCAAAAAGAATTTGCCTCTCATGGATGGAGTTTCAAGGGGCTCTCTAATTCCTAAAATCTAAATCTGAAACCTTAATGTTTGGTTGGAAATTTGTTGGACAGTTGAATGAATACATTAGACAGACATTGAGATTTACTATTAATGTGTTTTGGTAGGATATCAGAGTGTTTTCTAAATGTAGTTTTGTTGACTGCTACAACTCTACATTATCAGTCTGCTACTAGAGATTGTGTTGAATTATGTTAACCCACCAATCAATTGAGAAGCCTAAATCGATGGATTGAGGTAAATTTAATTATATCAACTAACAC GGAGAAACAATTAAATAAAGGAATCTCAATAGAGAACCCAAATAGAAATGGCTTATTATTTTTCAGCCACAACCAAAGCCAGTTTGTTCTTCTTCCTTATCCTTTCATGGTTGCATGTGAACCATAGCTCAAGCATTTCAAAGGACCCAGTTCCAACTCCATGGCCACACCAATTCCACTCCGTCGAGCTTGTAAACACTAGCGGAACTCTGCAGATAATCGAGCTCTGGTACGACTGGCCGAACGGTCGCAACTTCAACATCATCCAGCACCAGCTCGGCTACATCCTCTACGACCTCGAGTGGAACAATGGTACCACATTTTACTACACTCTAGAATCCAACACCTGCAATATCATCCAGTTCGACGTCGGCGTTCTACGACCCGACTGGCTCGACGGTGCCACTTATCTCGGGCAGCGCCATGTCGATGGCTTCCTCTGTAATGTATGGGAGAAGGTTGATTTCATTTGGTATTATGAGGATGTTGTCACCAAAAGGCCCGTTCACTGGGCCTTTTTCACTGGAATGGAAGCCCATGTGATGACATTTGAAGTGGGAGCAGTGTTGGAGGATGAGAAATGGCAAGCCCCTCCTTATTGCTTTGATGGTAAGGCAACAATTGGTGTTCCAAATAATGGGATTCTCAAAAAGAATTTGCCTCTCATGGATGGAGTTTCAAGGGGCTCTCTAATTCCTAAAATCTAAATCTGAAACCTTAATGTTTGGTTGGAAATTTGTTGGACAGTTGAATGAATACATTAGACAGACATTGAGATTTACTATTAATGTGTTTTGGTAGGATATCAGAGTGTTTTCTAAATGTAGTTTTGTTGACTGCTACAACTCTACATTATCAGTCTGCTACTAGAGATTGTGTTGAATTATGTTAACCCACCAATCAATTGAGAAGCCTAAATCGATGGATTGAGGTAAATTTAATTATATCAACTAACAC ATGGCTTATTATTTTTCAGCCACAACCAAAGCCAGTTTGTTCTTCTTCCTTATCCTTTCATGGTTGCATGTGAACCATAGCTCAAGCATTTCAAAGGACCCAGTTCCAACTCCATGGCCACACCAATTCCACTCCGTCGAGCTTGTAAACACTAGCGGAACTCTGCAGATAATCGAGCTCTGGTACGACTGGCCGAACGGTCGCAACTTCAACATCATCCAGCACCAGCTCGGCTACATCCTCTACGACCTCGAGTGGAACAATGGTACCACATTTTACTACACTCTAGAATCCAACACCTGCAATATCATCCAGTTCGACGTCGGCGTTCTACGACCCGACTGGCTCGACGGTGCCACTTATCTCGGGCAGCGCCATGTCGATGGCTTCCTCTGTAATGTATGGGAGAAGGTTGATTTCATTTGGTATTATGAGGATGTTGTCACCAAAAGGCCCGTTCACTGGGCCTTTTTCACTGGAATGGAAGCCCATGTGATGACATTTGAAGTGGGAGCAGTGTTGGAGGATGAGAAATGGCAAGCCCCTCCTTATTGCTTTGATGGTAAGGCAACAATTGGTGTTCCAAATAATGGGATTCTCAAAAAGAATTTGCCTCTCATGGATGGAGTTTCAAGGGGCTCTCTAATTCCTAAAATCTAA MAYYFSATTKASLFFFLILSWLHVNHSSSISKDPVPTPWPHQFHSVELVNTSGTLQIIELWYDWPNGRNFNIIQHQLGYILYDLEWNNGTTFYYTLESNTCNIIQFDVGVLRPDWLDGATYLGQRHVDGFLCNVWEKVDFIWYYEDVVTKRPVHWAFFTGMEAHVMTFEVGAVLEDEKWQAPPYCFDGKATIGVPNNGILKKNLPLMDGVSRGSLIPKI Homology
BLAST of Sed0020506 vs. NCBI nr
Match: KAG6576096.1 (hypothetical protein SDJN03_26735, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014614.1 hypothetical protein SDJN02_24793, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 348.2 bits (892), Expect = 5.1e-92 Identity = 157/206 (76.21%), Postives = 177/206 (85.92%), Query Frame = 0
BLAST of Sed0020506 vs. NCBI nr
Match: XP_023520922.1 (uncharacterized protein At4g14100-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 346.7 bits (888), Expect = 1.5e-91 Identity = 155/207 (74.88%), Postives = 177/207 (85.51%), Query Frame = 0
BLAST of Sed0020506 vs. NCBI nr
Match: XP_022953223.1 (uncharacterized protein At4g14100-like [Cucurbita moschata]) HSP 1 Score: 346.7 bits (888), Expect = 1.5e-91 Identity = 156/206 (75.73%), Postives = 176/206 (85.44%), Query Frame = 0
BLAST of Sed0020506 vs. NCBI nr
Match: XP_023548717.1 (uncharacterized protein At4g14100-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 344.7 bits (883), Expect = 5.7e-91 Identity = 154/206 (74.76%), Postives = 177/206 (85.92%), Query Frame = 0
BLAST of Sed0020506 vs. NCBI nr
Match: XP_023548718.1 (uncharacterized protein At4g14100-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 343.6 bits (880), Expect = 1.3e-90 Identity = 153/206 (74.27%), Postives = 177/206 (85.92%), Query Frame = 0
BLAST of Sed0020506 vs. ExPASy Swiss-Prot
Match: Q67YC9 (Uncharacterized protein At4g14100 OS=Arabidopsis thaliana OX=3702 GN=At4g14100 PE=2 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.0e-71 Identity = 118/176 (67.05%), Postives = 141/176 (80.11%), Query Frame = 0
BLAST of Sed0020506 vs. ExPASy TrEMBL
Match: A0A6J1GMU2 (uncharacterized protein At4g14100-like OS=Cucurbita moschata OX=3662 GN=LOC111455833 PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 7.3e-92 Identity = 156/206 (75.73%), Postives = 176/206 (85.44%), Query Frame = 0
BLAST of Sed0020506 vs. ExPASy TrEMBL
Match: A0A6J1JR40 (uncharacterized protein At4g14100-like OS=Cucurbita maxima OX=3661 GN=LOC111488138 PE=4 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 1.0e-90 Identity = 154/206 (74.76%), Postives = 176/206 (85.44%), Query Frame = 0
BLAST of Sed0020506 vs. ExPASy TrEMBL
Match: A0A0A0KDE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091310 PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 3.0e-85 Identity = 150/198 (75.76%), Postives = 166/198 (83.84%), Query Frame = 0
BLAST of Sed0020506 vs. ExPASy TrEMBL
Match: A0A6J1D6E6 (uncharacterized protein At4g14100-like OS=Momordica charantia OX=3673 GN=LOC111017483 PE=4 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 5.0e-85 Identity = 154/219 (70.32%), Postives = 173/219 (79.00%), Query Frame = 0
BLAST of Sed0020506 vs. ExPASy TrEMBL
Match: A0A1S3CAT8 (uncharacterized protein At4g14100-like OS=Cucumis melo OX=3656 GN=LOC103498894 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 3.3e-84 Identity = 147/198 (74.24%), Postives = 166/198 (83.84%), Query Frame = 0
BLAST of Sed0020506 vs. TAIR 10
Match: AT3G23760.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 278.9 bits (712), Expect = 3.6e-75 Identity = 117/156 (75.00%), Postives = 137/156 (87.82%), Query Frame = 0
BLAST of Sed0020506 vs. TAIR 10
Match: AT4G14100.1 (transferases, transferring glycosyl groups ) HSP 1 Score: 271.2 bits (692), Expect = 7.4e-73 Identity = 118/176 (67.05%), Postives = 141/176 (80.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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