Sed0020276 (gene) Chayote v1

Overview


Name	Sed0020276
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein DOUBLE-STRAND BREAK FORMATION
Location	LG13: 20235989 .. 20241088 (+)
RNA-Seq Expression	Sed0020276
Synteny	Sed0020276

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGGCTGTGCCCGTTTCTAAAAAAAAGAAAAGAAAGAAGCTAATTCGAACGAAATTAAGAATTATTTAAAAACACTTGGAAACGATTTCATATAAAAGGCTAAAACTAGTTTCAGATTGCGAAGAACCATTCTTTCCCGCCAATTAATTGATGTCTTCTTCAGTTGCAGAGCAATTTTCTCTCTTCGTCTCACGGCTCAAGAACCGAAGGTTTGGCTAATCACTCTCAAGATTTTTGCTAATCTCCGTTAACTTTTGCTTCCTTTCATTGTCTTTGATGCTCTAACGCTCAAGATTTCCACAGATTCGATGATTCTACATTGCGACTTCTGGTATTTCTTTCCGTTTCGAAAGACGTGATGTCGTTGATGGATGTCAAATCCAGCTTGAAAGATCTGCTCAGATCTGAATCTCTATCTATTATTCGTGATTCCGCTGAGAAAACTGAAGATCAGAAGCTTATAGTTCTTGAATTTCTTGTTCGAGCTTTCGCCTTAATCGGAGACATCGAGGTGAGCATTTTCTTGCTTAGTTCTCATTGTTCGTTCAGGATATCAAAATTAGTTTCGCTAATAGCTTCGTTTTTGTTGTTTTCGTTGTTATTCACTTTTGTTTGCCGTATAAGTTTCTGTGGTGTATTTTAGGATTTCATTGTGCCGAACATCGCAGAAATTTTCTTTAATCGCTTAGTTTTGGTAACTATGATTCTTGTGCTAAATGGTGATTTTGATAGCAGATGTGATAAACTAGTTCCTCTAATTTCGGTTTATGGCCTTTCATGCTCCTAGAGTTGCTTAGCTTTGAGATATGAGGCCTTGAATTTTCGGGACCAGAACTCTTTTAATCAGCCATGGCTTCAAGTTTCCCACGCAGAATGGTTAAACTTCGCCGAGCATTCATTGGACGCTGGCTTTTTTTCAATTGCAATTAAGGTAAGGAAATTATAATTTCTTCCGTTTACCTAACTGCTTAAGATTTTCTTTACCTCTTTGGTAGAAGTGCCCGTTCAATGCAAGTTTTATAGTACATTGGACCACTTATGTAGCATACACCTATAATGAGAATGTGAGATGTGAAGTAAGATTGATGTTTTCAGTATGCTGGTGCGACAATGAATAGTAGTTCATTAAGAAAAGCTTTGAGGGGAGAATTATTGAACACGAAAAAATAGCTTAGTTGAGATACGCCTTGAACTATTTGATGCCCCACGACTACTTATTGATCGACATTTTGTATTTTTGTCATCTCCTTAATAAAAGCGTTTTCTCTTCTTGTCCGTGACGTAGCTAACACATTATTAGTAAACTACATAAATTTGTGTCACGTTCTTTTTTACAATTTTCTTTTGTGTTTGTTGTTTTGATTTCGTAACAAGAGCAAAACTTTGATACTTCCTAGGAAGTACCTAGTACATATTTCCTTTTATTTGTGCGAACAATAATGTGTCACATAAAAAATGCAAGTATATAAAAATGCATTTAAAATATATTTAAAAAATGATGATTTGACTAATGAGAGAGAAATGATATATTAAAGATGTGCCACATTATTATCCTTATAAATCGTGGGAAGTATGTACTATATACTTCTTAGGAAGTTGGTATTGATCGAGTATATACTTCTTAAAAGGTGGAAGCCATGTGCAAGGCACATGATTTCTGGTGCCCAAATATACAATATTAGAAGGAAACTAGATGCATGACATTACGACAAATCCTATTTCTTAACATTCCTGTGGTATGAGGTTGGCTTTTAAGTTGAGAAAAAAAATCCTGTTACTTAGCATTACTGTATTCTTTCTATTTTGTATACATTGTTAAGTGCTTTGAAATAAGAATATCTAAACATGATAGGTACTGCTGAGGCTAAGTTTCATTAAAAAAGAGAATGCAGTAACCAGTAATAAAGTAAATATCTACTAGCTAGGCTGTAAGAGGTGGAAGCCATGTGAATGGCTTAAGGTCCAAGACAACCTATTTGGGGCTCCAAAATACAACACTAGCAGTGCAGAAGAAAAGAATGCACTCAGTTTAAGCAAAATCCTACTTCTTAACAACCAACTACCCGAACATGTCTTGATTGTTTGTTATTTGAGGTTGGTTATATGCTTGAATAAATATATTTGCATAAATCATCGTAGGGTGGTCTAGTGGTCAAGAGACCTTTTGAGAATTAAGAGGTGATAGGTTCAATCCGTGGCCAGATACCTAGAAATTAATTTTCTTTGAGTTTCCTTGACATTTTAATGTCCTAAGATTAGGCGGTCCCTTGACAATTGTCAAGGTGTGCTCAGGCTTACCTGTCACGAATATCTAATAAATATATTTGCTAAAACGTCAATGGATCTTGGAAGTTCCAAAATCCTAGGTTTTTTTTGTTTCACAGATTGGGCTTTTCTCGTAGTATTGCAATGTTGGTTAGCTTCCGCAAGTTTCAGGACCCATAGGATCAATTTGATGAAAGCTCTAGCTTGCCTTGAACTTTCTAGTTCTTCAAGTTCAATTTTGAATTTGTGATTGGATACCACAAGACAATTCAAGTCATTTAGAATATAGAAACAGAAATAGGATATTGGCTTTTGAAAGTTGAACCTCTGCCCGTTTATCAGGTTAAGTTGGATTTGATCAAATCTAATCTAGATGCACGACTCTGTTTTTCACAGTCCCTATTACTTTTAGTCTTTGACGTTGTTTTTTTTAAAAAAAATCTATTGTGTTTTATTTTGATTCTAATCTGCAGTGTTCGTAATTTTTCTCCTTCAATACAGTTAAATTATGGTGAAGACTCGATTACGGTGAACTTATATACAGTTTTCTTTGCTAGGCATATGAGCAGGCACTTTCACGACTTCAGCAGAGTGGTTCTGCAAACTACACAGCACATGATTCCTTTAAACGCACGGAAGTTATTGATAAGATAAAGAGACTCAAAGATTATGCTCTGAAATCCGCTGGTTCCCATTCTGGTAATGATCTTAGTTGAGTTAAATATTTTAGATCAAATCAATTACTAAAATTGACTGTATACTTAGGTTCATTATGCACAAGATGAATCTTAAAGGTCCTATTTGATAATAATTTTGTTTTTGAAAATTAAGCCTACTACAACAACTATTCCAATATATGGTTTTCTTGACTTTTATATTTACATTTTGTTAGTTGATATAATTAAAATTTATCCCAAAATTTTAAATTGATTAGTGGTTTAACATAATTCAACATGGTATCAGAATAGGAATTCATGAGTTTGAATCCCTCCCAAGTCATATCCTCCCCAATTAAAATTAAATGTTTAGACTTTTGGATTGATCGATGGTTTAACATAATTTAACACATTTTATCTCTGTTTTAAAAACCAAACCAAAATTTGAAAACTAAAGATAATAACTTCCAAAAACTTGTTTTGATTTTTGGAATTCAGTTAGAATTCAAATACTTTTTTATATGAAATCATTTATAGAGAATTTAAGTGAATACAAATTTGAATTTTAAAAACAAAAAACAGAGGGCAAATGGTTATCAAATGGACCCAAGTTTTCCATTTTCTGACATGGCCTTGTCTCATTGACAAAGTGACTCCCATGGATGAGATTTGTAACTTATTTGAACCTTGTGCTTTTGATCCCCTTTGTAGTTGCATCTTGGCCTAATATGCAACTCATTCATCAAATTATTATCCTCAAATGTCCTATTTTTCAAAGGGGAAGTAAATAAAACAGGATAGAATCAGTTCAAATGCCTTTTAGTGCTTACTGCTTAGGCATGGTTTTAGTAACCAATAGTCTTGTATTCATATATTTTTTAAACAACATATAATAGAGCCTCCTTGCAACAATCTGAACCATTGTAAATTTTATCTGATCAAATCAGTTCAGGCTCTCACATCTGAGTATTTGAAAAGGAAAGTAACTGAAAGGAATAGAAAGACTTCTTCATCCTGCACAAGTACTCAGTTTACAGCAAGTACTCTATTCAGAAATGGTATCAGAAACCATAATGCGAAAAAGCTGCATGAATACCAGGTTTTGATTTTTCCCGTGCTTGATATGGTATTTATTTATTTACGATCGTTTTTTTTTTCTGTAGTAAATTTATCATCGTTTTTTTGCTTCGTTACTATTTTGGTCTCTGTATTTTTTCTGTCTTGGTTGATTTTGATCAATGTACAAACAAAATGTTCATTTTGGTTTTGAGCTTTGAATTTTTGTTCATTGTAAACTTTTAAAACATTCATTTTGGTCCCTTCATTTTCATTTTTATCTCATTCCCTAGTTTCATAATTTTCGCATATGACACATCACTCACTAAATTTCTTGAAATATAGCAATGCATCTATATTACGGGGTTTTCACTTCTCAAAAAAAGAGAAGTTTTTCACTGTGTATAATGTTTATGTTTAAATTTTACAAATAAGGACCAAATTGGTCTCTTTATAAAAAATGAACCCTTTTTTTCAATAACTGAGAATCAGATTTTTGCCTCACTATACACTAGAGCACTCGCAATTGTCCAATAAAACAACAAGAGATTTTACAATTAAGCTAACTAGTGATAGGTTTCGAACTTGGGACTACCAAGTTAGCATACTTTGGAAACCCCAAGTCTCTACCAACAAAGCTGCTCCTTGAGGACTAATCTTTTAAAAATAGAGAACCAACAAATCAACTATAGTCAATAGTATTGAAGCTTTTCTATTTCCTCGTCTAACTTTCCTTTTGTTTTCAGGATCTGTCTGCTTCCATCAGGCAATAGGTTACTGGACATTTTATGCTGAACCTCAAGTTAGCTGCTGCAAACTTATACTTTTATTGCTGGGTGGTGATCGTAGAAGCTTGCTGGCAACATGGAAAATGCTTTCAATGAAATTCCAGTTTCACTCTATTGGTATGCAAGTCTTAATCTATTGGTATGCAAGTCTTAAGTCGTCCACTCCAGTATTTTAAAAAACTCAAGGCGCACTAAGGTGCATCGGCCCTTTAGAGCCTGAGGCACAAGATGCACCAAAAGGCCCGAGCTTTTTACTAAAGGCGCATACATGTATACATACACAAAACATATATATTAATCTCTTTCAATATAGAGATTTTACATAGTTATCTCA

mRNA sequence

GCTGGCTGTGCCCGTTTCTAAAAAAAAGAAAAGAAAGAAGCTAATTCGAACGAAATTAAGAATTATTTAAAAACACTTGGAAACGATTTCATATAAAAGGCTAAAACTAGTTTCAGATTGCGAAGAACCATTCTTTCCCGCCAATTAATTGATGTCTTCTTCAGTTGCAGAGCAATTTTCTCTCTTCGTCTCACGGCTCAAGAACCGAAGATTCGATGATTCTACATTGCGACTTCTGGTATTTCTTTCCGTTTCGAAAGACGTGATGTCGTTGATGGATGTCAAATCCAGCTTGAAAGATCTGCTCAGATCTGAATCTCTATCTATTATTCGTGATTCCGCTGAGAAAACTGAAGATCAGAAGCTTATAGTTCTTGAATTTCTTGTTCGAGCTTTCGCCTTAATCGGAGACATCGAGAGTTGCTTAGCTTTGAGATATGAGGCCTTGAATTTTCGGGACCAGAACTCTTTTAATCAGCCATGGCTTCAAGTTTCCCACGCAGAATGGTTAAACTTCGCCGAGCATTCATTGGACGCTGGCTTTTTTTCAATTGCAATTAAGGCATATGAGCAGGCACTTTCACGACTTCAGCAGAGTGGTTCTGCAAACTACACAGCACATGATTCCTTTAAACGCACGGAAGTTATTGATAAGATAAAGAGACTCAAAGATTATGCTCTGAAATCCGCTGGTTCCCATTCTGTTCAGGCTCTCACATCTGAGTATTTGAAAAGGAAAGTAACTGAAAGGAATAGAAAGACTTCTTCATCCTGCACAAGTACTCAGTTTACAGCAAGTACTCTATTCAGAAATGGTATCAGAAACCATAATGCGAAAAAGCTGCATGAATACCAGGATCTGTCTGCTTCCATCAGGCAATAGGTTACTGGACATTTTATGCTGAACCTCAAGTTAGCTGCTGCAAACTTATACTTTTATTGCTGGGTGGTGATCGTAGAAGCTTGCTGGCAACATGGAAAATGCTTTCAATGAAATTCCAGTTTCACTCTATTGGTATGCAAGTCTTAATCTATTGGTATGCAAGTCTTAAGTCGTCCACTCCAGTATTTTAAAAAACTCAAGGCGCACTAAGGTGCATCGGCCCTTTAGAGCCTGAGGCACAAGATGCACCAAAAGGCCCGAGCTTTTTACTAAAGGCGCATACATGTATACATACACAAAACATATATATTAATCTCTTTCAATATAGAGATTTTACATAGTTATCTCA

Coding sequence (CDS)

ATGTCTTCTTCAGTTGCAGAGCAATTTTCTCTCTTCGTCTCACGGCTCAAGAACCGAAGATTCGATGATTCTACATTGCGACTTCTGGTATTTCTTTCCGTTTCGAAAGACGTGATGTCGTTGATGGATGTCAAATCCAGCTTGAAAGATCTGCTCAGATCTGAATCTCTATCTATTATTCGTGATTCCGCTGAGAAAACTGAAGATCAGAAGCTTATAGTTCTTGAATTTCTTGTTCGAGCTTTCGCCTTAATCGGAGACATCGAGAGTTGCTTAGCTTTGAGATATGAGGCCTTGAATTTTCGGGACCAGAACTCTTTTAATCAGCCATGGCTTCAAGTTTCCCACGCAGAATGGTTAAACTTCGCCGAGCATTCATTGGACGCTGGCTTTTTTTCAATTGCAATTAAGGCATATGAGCAGGCACTTTCACGACTTCAGCAGAGTGGTTCTGCAAACTACACAGCACATGATTCCTTTAAACGCACGGAAGTTATTGATAAGATAAAGAGACTCAAAGATTATGCTCTGAAATCCGCTGGTTCCCATTCTGTTCAGGCTCTCACATCTGAGTATTTGAAAAGGAAAGTAACTGAAAGGAATAGAAAGACTTCTTCATCCTGCACAAGTACTCAGTTTACAGCAAGTACTCTATTCAGAAATGGTATCAGAAACCATAATGCGAAAAAGCTGCATGAATACCAGGATCTGTCTGCTTCCATCAGGCAATAG

Protein sequence

MSSSVAEQFSLFVSRLKNRRFDDSTLRLLVFLSVSKDVMSLMDVKSSLKDLLRSESLSIIRDSAEKTEDQKLIVLEFLVRAFALIGDIESCLALRYEALNFRDQNSFNQPWLQVSHAEWLNFAEHSLDAGFFSIAIKAYEQALSRLQQSGSANYTAHDSFKRTEVIDKIKRLKDYALKSAGSHSVQALTSEYLKRKVTERNRKTSSSCTSTQFTASTLFRNGIRNHNAKKLHEYQDLSASIRQ

Homology

[Close]

BLAST of Sed0020276 vs. NCBI nr
Match: XP_022970619.1 (uncharacterized protein LOC111469552 isoform X1 [Cucurbita maxima])

HSP 1 Score: 363.2 bits (931), Expect = 1.7e-96
Identity = 193/237 (81.43%), Postives = 213/237 (89.87%), Query Frame = 0


Query: 1   MSSSVAEQFSLFVSRLKNRRFDDSTLRLLVFLSVSKDVMSLMDVKSSLKDLLRSESLSII 60
           M  SVAEQ+SLF SRL++RRFDDSTLR+L F S SKD M  MDVKS +K+LLR ESLSII
Sbjct: 1   MPCSVAEQYSLFCSRLRSRRFDDSTLRILEFFSASKDTMYFMDVKSGVKELLRFESLSII 60

Query: 61  RDSAEKTEDQKLIVLEFLVRAFALIGDIESCLALRYEALNFRDQNSFNQPWLQVSHAEWL 120
           R++ EKT+DQKL+V+EFLVRAFAL+GDIESCLALRYEALNFR+  SFNQP LQVSHAEWL
Sbjct: 61  RETVEKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWL 120

Query: 121 NFAEHSLDAGFFSIAIKAYEQALSRLQQSGSANYTAHDSFKRTEVIDKIKRLKDYALKSA 180
           NFAEHSL+AGFFSIAIKAYEQALS LQQS +ANYT+H S KR EVI+KIKRLKD+ALKSA
Sbjct: 121 NFAEHSLNAGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKRAEVIEKIKRLKDHALKSA 180

Query: 181 GSHSVQALTSEYLKRKVTERNRKTSSSCTSTQFTASTLFRNGIRNHNAKKLHEYQDL 238
           GSHSVQALTSEYLK+KVTERNRK SSSCT  +FTASTLFRNGIRNHNAKKLHEYQ L
Sbjct: 181 GSHSVQALTSEYLKKKVTERNRKISSSCT-RKFTASTLFRNGIRNHNAKKLHEYQAL 236

[Close]

BLAST of Sed0020276 vs. NCBI nr
Match: XP_022970621.1 (uncharacterized protein LOC111469552 isoform X2 [Cucurbita maxima])

HSP 1 Score: 363.2 bits (931), Expect = 1.7e-96
Identity = 193/237 (81.43%), Postives = 213/237 (89.87%), Query Frame = 0


Query: 1   MSSSVAEQFSLFVSRLKNRRFDDSTLRLLVFLSVSKDVMSLMDVKSSLKDLLRSESLSII 60
           M  SVAEQ+SLF SRL++RRFDDSTLR+L F S SKD M  MDVKS +K+LLR ESLSII
Sbjct: 1   MPCSVAEQYSLFCSRLRSRRFDDSTLRILEFFSASKDTMYFMDVKSGVKELLRFESLSII 60

Query: 61  RDSAEKTEDQKLIVLEFLVRAFALIGDIESCLALRYEALNFRDQNSFNQPWLQVSHAEWL 120
           R++ EKT+DQKL+V+EFLVRAFAL+GDIESCLALRYEALNFR+  SFNQP LQVSHAEWL
Sbjct: 61  RETVEKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWL 120

Query: 121 NFAEHSLDAGFFSIAIKAYEQALSRLQQSGSANYTAHDSFKRTEVIDKIKRLKDYALKSA 180
           NFAEHSL+AGFFSIAIKAYEQALS LQQS +ANYT+H S KR EVI+KIKRLKD+ALKSA
Sbjct: 121 NFAEHSLNAGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKRAEVIEKIKRLKDHALKSA 180

Query: 181 GSHSVQALTSEYLKRKVTERNRKTSSSCTSTQFTASTLFRNGIRNHNAKKLHEYQDL 238
           GSHSVQALTSEYLK+KVTERNRK SSSCT  +FTASTLFRNGIRNHNAKKLHEYQ L
Sbjct: 181 GSHSVQALTSEYLKKKVTERNRKISSSCT-RKFTASTLFRNGIRNHNAKKLHEYQAL 236

[Close]

BLAST of Sed0020276 vs. NCBI nr
Match: XP_023520164.1 (uncharacterized protein LOC111783465 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.5 bits (924), Expect = 1.1e-95
Identity = 191/237 (80.59%), Postives = 214/237 (90.30%), Query Frame = 0


Query: 1   MSSSVAEQFSLFVSRLKNRRFDDSTLRLLVFLSVSKDVMSLMDVKSSLKDLLRSESLSII 60
           M  SVAEQ+SLF SRL++RRFDDSTLR+L F S SKD MSLMDVKS +K+LLR ESLSII
Sbjct: 1   MPCSVAEQYSLFCSRLRSRRFDDSTLRILEFFSASKDTMSLMDVKSGVKELLRFESLSII 60

Query: 61  RDSAEKTEDQKLIVLEFLVRAFALIGDIESCLALRYEALNFRDQNSFNQPWLQVSHAEWL 120
           R++ +KT+DQKL+V+EFLVRAFAL+GDIESCLALRYEALNFR+  SFNQP LQVSHAEWL
Sbjct: 61  RETVDKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWL 120

Query: 121 NFAEHSLDAGFFSIAIKAYEQALSRLQQSGSANYTAHDSFKRTEVIDKIKRLKDYALKSA 180
           NFAEHSL+AGFFSIA+KAYEQALS LQQS +ANYT+H S K  EVI+KIKRLKD++LKSA
Sbjct: 121 NFAEHSLNAGFFSIAMKAYEQALSSLQQSDTANYTSHGSSKCAEVIEKIKRLKDHSLKSA 180

Query: 181 GSHSVQALTSEYLKRKVTERNRKTSSSCTSTQFTASTLFRNGIRNHNAKKLHEYQDL 238
           GSHSVQALTSEYLK+KVTERNRK SSSCT  +FTASTLFRNGIRNHNAKKLHEYQ L
Sbjct: 181 GSHSVQALTSEYLKKKVTERNRKISSSCT-RKFTASTLFRNGIRNHNAKKLHEYQAL 236

[Close]

BLAST of Sed0020276 vs. NCBI nr
Match: XP_023520165.1 (uncharacterized protein LOC111783465 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023520166.1 uncharacterized protein LOC111783467 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.5 bits (924), Expect = 1.1e-95
Identity = 191/237 (80.59%), Postives = 214/237 (90.30%), Query Frame = 0


Query: 1   MSSSVAEQFSLFVSRLKNRRFDDSTLRLLVFLSVSKDVMSLMDVKSSLKDLLRSESLSII 60
           M  SVAEQ+SLF SRL++RRFDDSTLR+L F S SKD MSLMDVKS +K+LLR ESLSII
Sbjct: 1   MPCSVAEQYSLFCSRLRSRRFDDSTLRILEFFSASKDTMSLMDVKSGVKELLRFESLSII 60

Query: 61  RDSAEKTEDQKLIVLEFLVRAFALIGDIESCLALRYEALNFRDQNSFNQPWLQVSHAEWL 120
           R++ +KT+DQKL+V+EFLVRAFAL+GDIESCLALRYEALNFR+  SFNQP LQVSHAEWL
Sbjct: 61  RETVDKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWL 120

Query: 121 NFAEHSLDAGFFSIAIKAYEQALSRLQQSGSANYTAHDSFKRTEVIDKIKRLKDYALKSA 180
           NFAEHSL+AGFFSIA+KAYEQALS LQQS +ANYT+H S K  EVI+KIKRLKD++LKSA
Sbjct: 121 NFAEHSLNAGFFSIAMKAYEQALSSLQQSDTANYTSHGSSKCAEVIEKIKRLKDHSLKSA 180

Query: 181 GSHSVQALTSEYLKRKVTERNRKTSSSCTSTQFTASTLFRNGIRNHNAKKLHEYQDL 238
           GSHSVQALTSEYLK+KVTERNRK SSSCT  +FTASTLFRNGIRNHNAKKLHEYQ L
Sbjct: 181 GSHSVQALTSEYLKKKVTERNRKISSSCT-RKFTASTLFRNGIRNHNAKKLHEYQAL 236

[Close]

BLAST of Sed0020276 vs. NCBI nr
Match: XP_022964954.1 (uncharacterized protein LOC111464906 isoform X1 [Cucurbita moschata])

HSP 1 Score: 357.1 bits (915), Expect = 1.2e-94
Identity = 190/237 (80.17%), Postives = 212/237 (89.45%), Query Frame = 0


Query: 1   MSSSVAEQFSLFVSRLKNRRFDDSTLRLLVFLSVSKDVMSLMDVKSSLKDLLRSESLSII 60
           M  SVAEQ+SLF SRL++RR DDSTLR+L F S SKD MSLMDVKS +K+LL  ESLSII
Sbjct: 1   MPCSVAEQYSLFCSRLRSRRLDDSTLRILEFFSASKDTMSLMDVKSGVKELLSFESLSII 60

Query: 61  RDSAEKTEDQKLIVLEFLVRAFALIGDIESCLALRYEALNFRDQNSFNQPWLQVSHAEWL 120
           R++ EKT+DQKL+V+EFLVRAFAL+GDIESCLALRYEALNFR+  SFNQP LQVSHAEWL
Sbjct: 61  RETVEKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWL 120

Query: 121 NFAEHSLDAGFFSIAIKAYEQALSRLQQSGSANYTAHDSFKRTEVIDKIKRLKDYALKSA 180
           NFAEHSL+AGFFSIAIKAYEQALS LQQS +ANYT+H S K  EVI+KIKRLKD+ALKSA
Sbjct: 121 NFAEHSLNAGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKCAEVIEKIKRLKDHALKSA 180

Query: 181 GSHSVQALTSEYLKRKVTERNRKTSSSCTSTQFTASTLFRNGIRNHNAKKLHEYQDL 238
           GSHSVQALTSEYLK++VTERNRK SSSCT  +FTASTLFRNGIRNHNAK+LHEYQ L
Sbjct: 181 GSHSVQALTSEYLKKRVTERNRKISSSCT-RKFTASTLFRNGIRNHNAKRLHEYQAL 236

[Close]

BLAST of Sed0020276 vs. ExPASy Swiss-Prot
Match: Q8RX33 (Protein DOUBLE-STRAND BREAK FORMATION OS=Arabidopsis thaliana OX=3702 GN=DFO PE=1 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.3e-33
Identity = 81/182 (44.51%), Postives = 118/182 (64.84%), Query Frame = 0


Query: 3   SSVAEQFSLFVSRLKNRRFDDSTLRLLVFLSVSKDVMSLMDVKSSLKDLLRSESLSIIRD 62
           S +A+Q  LF++R+++RRFD+ +LR+L    V+ +V S ++V+S L+D +RSES+ I  +
Sbjct: 30  SMIADQTYLFINRVQDRRFDEESLRILELSLVAMNVKSFLEVRSRLRDFMRSESVVIFGE 89

Query: 63  SAEKTEDQKLIVLEFLVRAFALIGDIESCLALRYEALNFRDQNSFNQPWLQVSHAEWLNF 122
              ++   KL VLEF  RAFAL+GD+ESCLA+RYEALN R   S +  WL VSH+EW  F
Sbjct: 90  LTGESMVAKLSVLEFFARAFALLGDMESCLAMRYEALNLRQLKSPSCLWLGVSHSEWTKF 149

Query: 123 AEHSLDAGFFSIAIKAYEQALSRLQQSGSANYTAHDSFKRTEVIDKIKRLKDYALKSAGS 182
           A  S++ GF SIA KA E AL  L++       + D+    +  +K++RL+D A     S
Sbjct: 150 AVQSMENGFPSIAGKASENALLSLKKDSLIEPKSEDNSDILDAAEKVRRLRDSAASLTSS 209

Query: 183 HS 185
           HS
Sbjct: 210 HS 211

[Close]

BLAST of Sed0020276 vs. ExPASy TrEMBL
Match: A0A6J1I645 (uncharacterized protein LOC111469552 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469552 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 8.3e-97
Identity = 193/237 (81.43%), Postives = 213/237 (89.87%), Query Frame = 0


Query: 1   MSSSVAEQFSLFVSRLKNRRFDDSTLRLLVFLSVSKDVMSLMDVKSSLKDLLRSESLSII 60
           M  SVAEQ+SLF SRL++RRFDDSTLR+L F S SKD M  MDVKS +K+LLR ESLSII
Sbjct: 1   MPCSVAEQYSLFCSRLRSRRFDDSTLRILEFFSASKDTMYFMDVKSGVKELLRFESLSII 60

Query: 61  RDSAEKTEDQKLIVLEFLVRAFALIGDIESCLALRYEALNFRDQNSFNQPWLQVSHAEWL 120
           R++ EKT+DQKL+V+EFLVRAFAL+GDIESCLALRYEALNFR+  SFNQP LQVSHAEWL
Sbjct: 61  RETVEKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWL 120

Query: 121 NFAEHSLDAGFFSIAIKAYEQALSRLQQSGSANYTAHDSFKRTEVIDKIKRLKDYALKSA 180
           NFAEHSL+AGFFSIAIKAYEQALS LQQS +ANYT+H S KR EVI+KIKRLKD+ALKSA
Sbjct: 121 NFAEHSLNAGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKRAEVIEKIKRLKDHALKSA 180

Query: 181 GSHSVQALTSEYLKRKVTERNRKTSSSCTSTQFTASTLFRNGIRNHNAKKLHEYQDL 238
           GSHSVQALTSEYLK+KVTERNRK SSSCT  +FTASTLFRNGIRNHNAKKLHEYQ L
Sbjct: 181 GSHSVQALTSEYLKKKVTERNRKISSSCT-RKFTASTLFRNGIRNHNAKKLHEYQAL 236

[Close]

BLAST of Sed0020276 vs. ExPASy TrEMBL
Match: A0A6J1I136 (uncharacterized protein LOC111469552 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111469552 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 8.3e-97
Identity = 193/237 (81.43%), Postives = 213/237 (89.87%), Query Frame = 0


Query: 1   MSSSVAEQFSLFVSRLKNRRFDDSTLRLLVFLSVSKDVMSLMDVKSSLKDLLRSESLSII 60
           M  SVAEQ+SLF SRL++RRFDDSTLR+L F S SKD M  MDVKS +K+LLR ESLSII
Sbjct: 1   MPCSVAEQYSLFCSRLRSRRFDDSTLRILEFFSASKDTMYFMDVKSGVKELLRFESLSII 60

Query: 61  RDSAEKTEDQKLIVLEFLVRAFALIGDIESCLALRYEALNFRDQNSFNQPWLQVSHAEWL 120
           R++ EKT+DQKL+V+EFLVRAFAL+GDIESCLALRYEALNFR+  SFNQP LQVSHAEWL
Sbjct: 61  RETVEKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWL 120

Query: 121 NFAEHSLDAGFFSIAIKAYEQALSRLQQSGSANYTAHDSFKRTEVIDKIKRLKDYALKSA 180
           NFAEHSL+AGFFSIAIKAYEQALS LQQS +ANYT+H S KR EVI+KIKRLKD+ALKSA
Sbjct: 121 NFAEHSLNAGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKRAEVIEKIKRLKDHALKSA 180

Query: 181 GSHSVQALTSEYLKRKVTERNRKTSSSCTSTQFTASTLFRNGIRNHNAKKLHEYQDL 238
           GSHSVQALTSEYLK+KVTERNRK SSSCT  +FTASTLFRNGIRNHNAKKLHEYQ L
Sbjct: 181 GSHSVQALTSEYLKKKVTERNRKISSSCT-RKFTASTLFRNGIRNHNAKKLHEYQAL 236

[Close]

BLAST of Sed0020276 vs. ExPASy TrEMBL
Match: A0A6J1HPP0 (uncharacterized protein LOC111464906 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111464906 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 6.0e-95
Identity = 190/237 (80.17%), Postives = 212/237 (89.45%), Query Frame = 0


Query: 1   MSSSVAEQFSLFVSRLKNRRFDDSTLRLLVFLSVSKDVMSLMDVKSSLKDLLRSESLSII 60
           M  SVAEQ+SLF SRL++RR DDSTLR+L F S SKD MSLMDVKS +K+LL  ESLSII
Sbjct: 1   MPCSVAEQYSLFCSRLRSRRLDDSTLRILEFFSASKDTMSLMDVKSGVKELLSFESLSII 60

Query: 61  RDSAEKTEDQKLIVLEFLVRAFALIGDIESCLALRYEALNFRDQNSFNQPWLQVSHAEWL 120
           R++ EKT+DQKL+V+EFLVRAFAL+GDIESCLALRYEALNFR+  SFNQP LQVSHAEWL
Sbjct: 61  RETVEKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWL 120

Query: 121 NFAEHSLDAGFFSIAIKAYEQALSRLQQSGSANYTAHDSFKRTEVIDKIKRLKDYALKSA 180
           NFAEHSL+AGFFSIAIKAYEQALS LQQS +ANYT+H S K  EVI+KIKRLKD+ALKSA
Sbjct: 121 NFAEHSLNAGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKCAEVIEKIKRLKDHALKSA 180

Query: 181 GSHSVQALTSEYLKRKVTERNRKTSSSCTSTQFTASTLFRNGIRNHNAKKLHEYQDL 238
           GSHSVQALTSEYLK++VTERNRK SSSCT  +FTASTLFRNGIRNHNAK+LHEYQ L
Sbjct: 181 GSHSVQALTSEYLKKRVTERNRKISSSCT-RKFTASTLFRNGIRNHNAKRLHEYQAL 236

[Close]

BLAST of Sed0020276 vs. ExPASy TrEMBL
Match: A0A6J1HMC3 (uncharacterized protein LOC111464906 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111464906 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 6.0e-95
Identity = 190/237 (80.17%), Postives = 212/237 (89.45%), Query Frame = 0


Query: 1   MSSSVAEQFSLFVSRLKNRRFDDSTLRLLVFLSVSKDVMSLMDVKSSLKDLLRSESLSII 60
           M  SVAEQ+SLF SRL++RR DDSTLR+L F S SKD MSLMDVKS +K+LL  ESLSII
Sbjct: 1   MPCSVAEQYSLFCSRLRSRRLDDSTLRILEFFSASKDTMSLMDVKSGVKELLSFESLSII 60

Query: 61  RDSAEKTEDQKLIVLEFLVRAFALIGDIESCLALRYEALNFRDQNSFNQPWLQVSHAEWL 120
           R++ EKT+DQKL+V+EFLVRAFAL+GDIESCLALRYEALNFR+  SFNQP LQVSHAEWL
Sbjct: 61  RETVEKTDDQKLLVIEFLVRAFALVGDIESCLALRYEALNFRELKSFNQPRLQVSHAEWL 120

Query: 121 NFAEHSLDAGFFSIAIKAYEQALSRLQQSGSANYTAHDSFKRTEVIDKIKRLKDYALKSA 180
           NFAEHSL+AGFFSIAIKAYEQALS LQQS +ANYT+H S K  EVI+KIKRLKD+ALKSA
Sbjct: 121 NFAEHSLNAGFFSIAIKAYEQALSSLQQSDTANYTSHGSSKCAEVIEKIKRLKDHALKSA 180

Query: 181 GSHSVQALTSEYLKRKVTERNRKTSSSCTSTQFTASTLFRNGIRNHNAKKLHEYQDL 238
           GSHSVQALTSEYLK++VTERNRK SSSCT  +FTASTLFRNGIRNHNAK+LHEYQ L
Sbjct: 181 GSHSVQALTSEYLKKRVTERNRKISSSCT-RKFTASTLFRNGIRNHNAKRLHEYQAL 236

[Close]

BLAST of Sed0020276 vs. ExPASy TrEMBL
Match: A0A1S3CL48 (uncharacterized protein LOC103502216 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502216 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 4.4e-90
Identity = 178/229 (77.73%), Postives = 203/229 (88.65%), Query Frame = 0


Query: 9   FSLFVSRLKNRRFDDSTLRLLVFLSVSKDVMSLMDVKSSLKDLLRSESLSIIRDSAEKTE 68
           +SLF+SRL++RRFDDSTLR+L     SKD  SL DVKSS  +LLR ESLSIIR++AEKT+
Sbjct: 5   YSLFLSRLRSRRFDDSTLRILELFPASKDATSLADVKSSFSELLRFESLSIIRETAEKTD 64

Query: 69  DQKLIVLEFLVRAFALIGDIESCLALRYEALNFRDQNSFNQPWLQVSHAEWLNFAEHSLD 128
           DQKL+V+EFLVRAFAL+GDIESCLALRYEALNFR   SFNQPWLQVSHAEWLNFAEHSL 
Sbjct: 65  DQKLLVIEFLVRAFALVGDIESCLALRYEALNFRVLKSFNQPWLQVSHAEWLNFAEHSLH 124

Query: 129 AGFFSIAIKAYEQALSRLQQSGSANYTAHDSFKRTEVIDKIKRLKDYALKSAGSHSVQAL 188
           AGFFSIAIKAYEQALS LQQS +ANYT+H SFK TEVI+KI RLKD+AL  +GSHSVQAL
Sbjct: 125 AGFFSIAIKAYEQALSSLQQSDTANYTSHGSFKHTEVIEKINRLKDHALNLSGSHSVQAL 184

Query: 189 TSEYLKRKVTERNRKTSSSCTSTQFTASTLFRNGIRNHNAKKLHEYQDL 238
           TS+YLK+KVTER+RK SSSCT  +FTASTLFRNGIRN+NA+KLHEY+ +
Sbjct: 185 TSDYLKKKVTERSRKISSSCT-RKFTASTLFRNGIRNYNARKLHEYRSI 232

[Close]

BLAST of Sed0020276 vs. TAIR 10
Match: AT1G07060.1 (unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 144.8 bits (364), Expect = 8.9e-35
Identity = 81/182 (44.51%), Postives = 118/182 (64.84%), Query Frame = 0


Query: 3   SSVAEQFSLFVSRLKNRRFDDSTLRLLVFLSVSKDVMSLMDVKSSLKDLLRSESLSIIRD 62
           S +A+Q  LF++R+++RRFD+ +LR+L    V+ +V S ++V+S L+D +RSES+ I  +
Sbjct: 30  SMIADQTYLFINRVQDRRFDEESLRILELSLVAMNVKSFLEVRSRLRDFMRSESVVIFGE 89

Query: 63  SAEKTEDQKLIVLEFLVRAFALIGDIESCLALRYEALNFRDQNSFNQPWLQVSHAEWLNF 122
              ++   KL VLEF  RAFAL+GD+ESCLA+RYEALN R   S +  WL VSH+EW  F
Sbjct: 90  LTGESMVAKLSVLEFFARAFALLGDMESCLAMRYEALNLRQLKSPSCLWLGVSHSEWTKF 149

Query: 123 AEHSLDAGFFSIAIKAYEQALSRLQQSGSANYTAHDSFKRTEVIDKIKRLKDYALKSAGS 182
           A  S++ GF SIA KA E AL  L++       + D+    +  +K++RL+D A     S
Sbjct: 150 AVQSMENGFPSIAGKASENALLSLKKDSLIEPKSEDNSDILDAAEKVRRLRDSAASLTSS 209

Query: 183 HS 185
           HS
Sbjct: 210 HS 211

The following BLAST results are available for this feature:

BLAST of Sed0020276 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022970619.1	1.7e-96	81.43	uncharacterized protein LOC111469552 isoform X1 [Cucurbita maxima]	[more]
XP_022970621.1	1.7e-96	81.43	uncharacterized protein LOC111469552 isoform X2 [Cucurbita maxima]	[more]
XP_023520164.1	1.1e-95	80.59	uncharacterized protein LOC111783465 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023520165.1	1.1e-95	80.59	uncharacterized protein LOC111783465 isoform X2 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022964954.1	1.2e-94	80.17	uncharacterized protein LOC111464906 isoform X1 [Cucurbita moschata]	[more]

BLAST of Sed0020276 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RX33	1.3e-33	44.51	Protein DOUBLE-STRAND BREAK FORMATION OS=Arabidopsis thaliana OX=3702 GN=DFO PE=...	[more]

BLAST of Sed0020276 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I645	8.3e-97	81.43	uncharacterized protein LOC111469552 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1I136	8.3e-97	81.43	uncharacterized protein LOC111469552 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HPP0	6.0e-95	80.17	uncharacterized protein LOC111464906 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HMC3	6.0e-95	80.17	uncharacterized protein LOC111464906 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3CL48	4.4e-90	77.73	uncharacterized protein LOC103502216 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Sed0020276 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07060.1	8.9e-35	44.51	unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044969	Protein DOUBLE-STRAND BREAK FORMATION	PANTHER	PTHR37176	F10K1.23	coord: 1..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0020276.1	Sed0020276.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042138	meiotic DNA double-strand break formation