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Sed0020045 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCGGGGAGCCCCCCCTCCCATCAGTCTCGCAAGAACACAGAAACTTGCCAATGCCGTGTCTCGATTTTCGTCCCAAATCCCTAGCCCTTCCCTCAAATTTCCCCCTTTTTAATGACAATTTCTCTTCCATTTCCCAACCCTAAGAACCCCAATTGCAAGTATCGCAAACCCTAAAGCGAATCATCCACTCCCAAACTCGTGTATCTCGAATCATCGACCTCGGCTTTGTATCTTCATCAACGGGCTATTTGAGGTATAGCGTATTGAGATTGGACGGGTTTTGTGATTTTTTAACTGGGTATTTTGATTTTTGTTGTTTAATCTTGGTTTCGGTCTCTGGGTGTTTGATTTTGTTCATCCGGGGTTTTGAAGACTTTGATGTTCTTGTTTGCTTTGTTGGGAAAAACGATCCGGTGGAGTTTGGAAAGGGGTTTTGATGATCGGTTGTGGATTTTGTGGTTTTTATTGTCAGGTCTTGTGATTAATCGGTGGATTTTATGGTTTTTTGATTCGGGTGTTGTTACTGATTTGGTGGTTTGCTGCTACCTAAAAGAATGTTTGCGGAGAAACGGGTAGTGGTTGACCATAAGAGTGGGTTTTGTGAAGAATGTGGGGTTTTTCTTTTTAATTGTAAATCTGGGAACTGCTTCTGTTGGTTGAAAATTTTATAGGTGTCTGGGTTTATGAACTTCTGAGTTCGATGGTGTGTTTCCTGTGTAATTTGCTTTCTGTGAATCTCCTTGTGTTTATTGCATGACTAAACTTTAAGCTCATGGGGTTTTTGTTGGGAATAAGTCAGATGATTGATGATACTGTGTTTTCAATTTGTGTGGTTGATTATTGATGATTGATGTACTGTAAGGGTCCCTGGCGTGTTAGTTTAGTTGTTTGGTTGTAAACCAGTTCAACTCTACCGTTACGGGTTCGATTATGAAAATCTGATTTTACTCACCTTAATTGAGTGCAGATGTATTTTCTTTTGAGTTTTGGTGTTTTTTGTGATTTTGAGATCAAGATCGTTGGTAGCTTTTAGGTTTTCTCATTCAAACTTTTATAATTGGTAGGATTGTAACAAGGCTTAAACTATAGAAAAAAAATTGTAATCTAGCCTAAATCATGTAAGTTACCTGAGATTTTTAAATGGTCACCATTAAAATGGTGACTATGGAATGAACACATTCCTTGAACTTTTTATTTTTCTGAGGTTTTTTGAGCTCTTATTGATGTATACCTTAATTATAGCTAATCTTACTTTGGACTAGAGTTAGATTATGTATACCTTAGTTTATTTGTTTGGTTGTAAATCGGTTTAACTCCGCAGTTACGGGTTTAATTATGTATACCTTAAAGTTCTGTGCATGTTAGTTAATGATTGATTGGTAACCGAAGTTTTTTAGGGTTTTCTCATCCAAGCTTCAAAGTTTGTATTTGAGTGGTGGGTGTTGTTGTTTTGGCTTTGTTGGAAGCTTTCTTTCTCGAAATTTCCTTTTTTCACTTTATCTGATATCAATTGGATTTTTATTTGCATAACTTTTTTTTAATATAATGAAGGCATGTATAGCAGGCTGTTGAGGAGCTCCAAAATATATGAGTACTCAGGCAATGAGGGGACATACTGCAAGAGGCTATCATCGTCGAAAATCATTGGACTTAGACCTAAACATCATGCCACCAACTGAGAACCGAGATCAAGGGGAAACATCTCGATTGGTGGTTCAGGAAGCACAAGTTAATCAACAACCGTCAGGACAGCCACAGATGATCGACATTGAGGCCATTGACGATGATGTTGTTGAATCATCCCCTAGAGCTTTTGCTGAAGTATGCTTCCTCTGGCTTTACTTTATTGTTTAGTACTTATGAAGTTATGATTCTTCCATCCACTTTTTATTCTTGTTTTATTGATTAATTCTGATATCATTTTGTCAGGCTAGAAATAAATCCAGACGGAATCCTATGAATAATATAGTTGATGTGGAAGCAGGTATGTTTATTTCAGCTGGTGGAAGACTATAGTTAGGCAGTTTTTTTTGCGTTATTTACCCCCCTTTTTTAATTGGGGAAGAAAATGGTAGCATGTTGGTCTGTCTATTTTAATGCACCTTACAATACAATTTAATTTTTGTACATTTTATTCTCTATTTAGTTTCTATAAATTATAAAGGTGTTAGTTTGCTGCTTGTTCATTACAAAAGGAAGCTAAGAAATTAGATATATTCGAATATTGAACATTGGTGTAATTATTTGGGTAGTTATTCATTGGGATTATGGTCTCAGAAGCAGAAATCGAAACAGCCTTTAGATTTGGGGATTCATGTTCTTTTTTTGATGGGAAACAATACTTTTCATTGATATATGAAAAATTTGGGGATTCATGTTCTCAAACATTTAGATTATTTAAGGAGCTAGACATCTTTAAGCGGGGATTCATGTTCTCAAACATTTAGATTATTTAAGGAGCTAGACATCTTTAAGCATTAAATACTTGGGAATAAGAATGTCGCAAACTGCAGATGAGATAATTCTAAGTTATTTTTTTTTTAGATATTCTTGATTTTCTGGGGCAGCTTCAACAATTTTCTCAGGGACAACCATCTGACCCTACTACATTTGGTTGTCAAGGTAACTAGTATGATATTAATTTCTAAATAGGTGACCACTTGAGTTGAATCCATAATCTCTAAGCATTTATTTGACCACTCTGCTACTCGGCTAGGCCACACATGATGGTTAATACCCAGCTAATGGTTATGATAGTCTTTAACTTGGAGATTTGTAACCTCGACCTACTATTGATTGTCTAGATTTTCTATTAGCAAATCACCGCCATTGCATAATCTTTTGCTATGACTCAGACATCACTTTCAATGTGTACCTTTATAACTGTTTAGTTATAAATAAAATTTCTGTTGTCTTTAGCTAGCTTCTTATTGAATCTTTCAACTTCATCATTAAGACATGATCAAACCATTCATAGATGACTAGAAGGCGAGCTATTGCGACTTCCTATTTTTTGGGGTTTAGGGTTGTAGGGTCGGACGGTCCGTCTTGTGAGAATAGTCAAGGTGTGCATAAATTGATTTAGACACTCAGGGATGAAGAAAAGAATTTTTTTGTCTGCTAACCAGATCGTCAAATTGTTGTGATGCTTGCACAATCATTCCCTCGTCTTTTATTTGTTGCAGAGAACATGGTGTCAAATAATAACCGGAGCAAGCGTCGGAGAGAAGTCTCAAGTCAAAAAACTCTGAATTCCGATTTACTAATCAATTTGGAAGCCAGCAACAGCTCTGTGGTACTGGGACAACTTATATCTTTGTTCCTCTTATTTTTGTGCAAGTTTTTTCTTGCGTCTTTTGATGTAGTGTATAGATGATATAATATCTGTTTTTGAGACTGGAGTTTTTGCTTTTCTCCCGTAACTTATATCTGTATCTTTCTCCTGGCATATTCCTGATTGCTATTTCTTGCATGTCCAACTTATCATTATTTTTTAAATGATTAAACATACAAAAAAAGTTGTGTGAAAAAAATGGTTGGGTGAACTTGCCATTGGAGTCAGAAGCACATCCACTTTAGTTTGGCGTGCATATCTGTAGGTCCAACAATTGCTAGACATATGCAGGAACATTTGTAATAAAAAGATATCCAAACTAAAGTGTCACTAGTAAACTAAAAAATTCTTCACCAGATATAATGGTCACTAGTTTAATGATAGAATTTGGATCTATCTATTAGCAAATCATCGTGAAGATATGCGATAAACCAAGTGATTCGAGTTACTTGGACCCTCCCTAGACTCTTGAGATCTCTGAAGCCTTAATTCTCATACAATTCAAAGATACTTCCTCACTAAGCAAACCTCCCTATTTATAACCACCATATACAACTCATACTCTAACTAATTGCATAATGGCCCTTATACTATTCTTTAATATTCCTAAGGCCCAAACCTATCATTTAACTTTTGTCTTATGACTAAACTCTTTAACCTCAGGCACCATCACTCTTTAACCTCAGGCACCATCACTCTTTTAACCTCAGGCACCATCACTCTTTAACCTCAGGCACCATCTTGGTGGTCTTTATTTGTAGTTGTAGCATCTTGGTAACTGTTGGTGTTCAAAATGTGATTTTGCAATAAATTTAGATTCTTAGAAGAAAAGAAAGCCTTGGTGTTAAAGCGGTTTTTGTGTTAAATTTGGAAGAAATAAATATTGACTTCTGAAAATACTTCTAAGTCTTTTTTTGGGGGTAGGAAACAATCTTATTGATATAGAAGAGTCCTAAGGAATTTGTCATCTTCTCCCCCTTTCCTCTGGCTTTATCCGATGGAGATTCTTTGGCATACGTGTAAATCCTCTCAATGAGTAGCTGATTCATGAGATAATCTCTTAGATGTGCAAGTCCTCCCTTCTTAGGATTAGTTCAACTTCTTTAGAGTTATTGACTTGTTTTATTCTTGAATCTGGCTCCATCCTTTGTAACACTTTCATTTCATCAATTAAGATGTTTATAGTTTCGTAACATAAAAAAGCCATAAGATCATTACACGCGGCCTCTCCAATTAGACTATTACATGAGACCTCTCCCATTAGTAAGGTGGGTAGAAAAAGAGTAATCAAGAAAACACGTCCAAGTATTATAATGAAAAAACGTTGAGATCAGTTGCTAACCTTGGAAATGATGGTCAGTAAATGAAAAACTACTTTTTGGTGGTGTACAAACCCAATAAGTGGTTTTGTAATTACGGGATTTTGAATGATTGGAGGCCTTTGTTGTCTTAGTCTTTAGGCTGTCCTATTTCTTTTATTTGTAATACAGCCCTCAAGTGTTGAAAATGTGATTACATCTCTAGTGCTTAATCTTGAACCAACATGTGATTTATGTCTTATTGGCAGAAAGAGAAGCCTGCTCCACCAAAGGAGCCCAAATTCAGTTGTCCAATATGCATGGGTCCATTAGTGGAGGAAACATCTACAAGGTGTGGTCATATTTTCTGCAAATCATGCATTAAGTCTGCAATAGCTGTCCAGTGTAAATGCCCAACCTGCAGGAAGAGAGTGACTGCCAAAGAACTCATTAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGAGGCTTATATGTAAGTTGCTTAATTGCTTGTACACATGGTACAATAGATTTTCAATATGCATTTTTTTAATTGGCCTAGACCTGAGATTTCTTTCATAAATAACCTTGTCTCAATGGTTATGAGTGAGATGCGTTTTTTGAGCGTTATCGCTTACGGTTTAGGGGTGTTATGCAGCTGTGATTCGGGCCTGGAGCAATTACAGTTATCGTAAGGGTATTGGCACTATTGCACGTGTTTGATTAAAGATACATTTGAATTAGAGTGTATTTTTAATATAGCGAAAATGAGCATAGCTAAATTGCCCTATTGAATGTGTTAAGGAGTCTGTGTTTTTTAATATCGGATAATTCAGGCATTTTTGATAACCATCTAGGCCCCATTTGATAACCATTTGGTTTTAGGTTTTATGTTTTTGAAATTTACACCTATTCTTACTCAAATTTCTTACAACGTATTCCAACTTTACTATAATGTATCCATTTTTTCTTAAGAAAGTAGGTGAATACTAACCAACTTTTAAAAACAAAACAGACTTTTGAAAGATACTTTTTTTTTTCTTCCAAATTTTGGTTTGGTTTCTACAAATATAGAGGTAGATATCCAAGTAAGATGAAACATATGGTAAAATAATTGTTGTAGGCTTAAATTTCAAAAACCAAAAACAAAAGATCAAATGGTTATCAAATGAGATCTTAATTTTTAGTTTTTGTTTCTGAAATTTAAACCTATATTCTTACTTGGATATCTATCTCTTACCAATATTTTTAAAAACCAAATCAAAATTTGGAAACAAAAAATAGTAGCTTCCAAAAATTTGTTTTTGTTTTTAAAATTTGGTTAACATTCACATTCTTTCTTAAGGAAAGATGGATATATTGTAAGAAAGATGAAACACATGGTAGGAAATTTGAGTAAAAATAAGCTTAAATTTAAAAAACAAAAGCAAAAAACCAAATGATTATCAAATAAGACCTTAGATTTGATTTTGTATACAGGGGATGTGTGTGTATATTTTTTTTTGATATTCAGGGGAGGTGTATATTAAATCCACTGAGTTCAGTTTTTCTATGCTTTTTTGTATTATTTTGTTTATTCTCAATGAACATCAAATTCTATTAATTATTGGCATTTTGTCCTCTGTGCTGGACAGATGTCCTCGTAGAACCTGAAAATTACGAAATTCTATTTTTAAAATACTTAGTTTCTATTGTCCCTAAGGGAGTGTTTGGGATTTGGTGTTGAGGAGAGGAGGGGAAGGAGAAATTTCAACTCTTTGTTTGTTTTTAGGACATCATCCTCTCCCCAACTTCTCCTCAACCTCTCCCCTAATATCACATCAAACCTTTTATTTTATCTTTTAAATGTCACATCAAACGTTTTTTTAATTTTTAACCATATAATACAATATAAAATATCTTTTATCTAATCTTATCAAATATTGCATCAAACTTTCTTTAATTTTCAACCACACAATAAAAAATAAAATATATTATATTTATCCATCAATCCAAAATCTACGATCATTACATTATAAAAAATCAATATAAAATAAATATTTTTATAACATCTCCTCTCCAAGACATCAATCTCCAAACAACTACTTCATATCTTCAAATCATTCTACTTCCTCTTTCTCTTCAACCTTCTTTTCCCTCCTCTTTTCAACACCAAAATCCAATCACCCCCTAAGGGATGACACAGTGGTTGAAGACGTAGGGTTTGAAGGTATACTCTCTTCAAGGTCTCAGGTTCGAAACTCACATGTGACATTGTCTCCCGGTGCCTGGCCTAGACACGTGCGTGGTTACCCTTGTTTAAAAAAAAAACTTAGTTTCAATTAAGATTATATAAATCAACCATATTTTGAGGAGATATGGTGTAGATGAAAATTTAAGGCTTCGTTTGATAACCATTTTGTTTTTAGTTTTTGGGTTTCGAAATTTAAGCCTACAACAACTACCTTATCATTTGTTTTTTTCTTACTTGGATGCTTACCTCTTACCTATATTTTTAGAAACCAAACTAAATTTGGAAACAAAAAAAGTAGTTTTCAAAACTTGTTTTTATTTTTGAAATTTGATTAACATTCACATACTTTCTCAAGGAGAGATGGACACATTGTAGGAAAGATAAAATGCATCATAAAAAATATAAGTAAAAATAAGCTTTGAAGTTCCAAAAACCAAAAACAAAAAATCAAATGGTTATCGCACGGGATTTAAATTTTCTGGATTCAAAATTGCGGATAATTAGAAAACAAAGTAGGCATCTTATGTGATTGAACACATTGATCATTCTCCATTTTATGCCTGACTGCAATCAGAGCCTTATTTTCTAAATTGGTCTTTTAATATGGTAAAATTACATCTCACAGGATTTTGTTTGTCGAAGACTTCGAAGGGAAATGGTCGAAGTTTTCTTGCAAGTAAGAAAAGCTAATTTTTAGATGGAAATTTTCGGTGCATTCTGCAGATGACTGTTGCTGCTTGATGATATCAGAGTTGCAATAAAAATAAATTTACCGACAAATAAACAAATAGTAATGCTGGTTATATTCATATTATGATGTAGCAGGATTAAATTTGAATAGAAATGGGTGTTCCAAATCTCCCATGTTTAAAGACTATAACATTGCTTCCAT TTTCGGGGAGCCCCCCCTCCCATCAGTCTCGCAAGAACACAGAAACTTGCCAATGCCGTGTCTCGATTTTCGTCCCAAATCCCTAGCCCTTCCCTCAAATTTCCCCCTTTTTAATGACAATTTCTCTTCCATTTCCCAACCCTAAGAACCCCAATTGCAAGTATCGCAAACCCTAAAGCGAATCATCCACTCCCAAACTCGTGTATCTCGAATCATCGACCTCGGCTTTGTATCTTCATCAACGGGCTATTTGAGCAGGCTGTTGAGGAGCTCCAAAATATATGAGTACTCAGGCAATGAGGGGACATACTGCAAGAGGCTATCATCGTCGAAAATCATTGGACTTAGACCTAAACATCATGCCACCAACTGAGAACCGAGATCAAGGGGAAACATCTCGATTGGTGGTTCAGGAAGCACAAGTTAATCAACAACCGTCAGGACAGCCACAGATGATCGACATTGAGGCCATTGACGATGATGTTGTTGAATCATCCCCTAGAGCTTTTGCTGAAGCTAGAAATAAATCCAGACGGAATCCTATGAATAATATAGTTGATGTGGAAGCAGATATTCTTGATTTTCTGGGGCAGCTTCAACAATTTTCTCAGGGACAACCATCTGACCCTACTACATTTGGTTGTCAAGAGAACATGGTGTCAAATAATAACCGGAGCAAGCGTCGGAGAGAAGTCTCAAGTCAAAAAACTCTGAATTCCGATTTACTAATCAATTTGGAAGCCAGCAACAGCTCTGTGAAAGAGAAGCCTGCTCCACCAAAGGAGCCCAAATTCAGTTGTCCAATATGCATGGGTCCATTAGTGGAGGAAACATCTACAAGGTGTGGTCATATTTTCTGCAAATCATGCATTAAGTCTGCAATAGCTGTCCAGTGTAAATGCCCAACCTGCAGGAAGAGAGTGACTGCCAAAGAACTCATTAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGAGGCTTATATGATTTTGTTTGTCGAAGACTTCGAAGGGAAATGGTCGAAGTTTTCTTGCAAGTAAGAAAAGCTAATTTTTAGATGGAAATTTTCGGTGCATTCTGCAGATGACTGTTGCTGCTTGATGATATCAGAGTTGCAATAAAAATAAATTTACCGACAAATAAACAAATAGTAATGCTGGTTATATTCATATTATGATGTAGCAGGATTAAATTTGAATAGAAATGGGTGTTCCAAATCTCCCATGTTTAAAGACTATAACATTGCTTCCAT ATGAGTACTCAGGCAATGAGGGGACATACTGCAAGAGGCTATCATCGTCGAAAATCATTGGACTTAGACCTAAACATCATGCCACCAACTGAGAACCGAGATCAAGGGGAAACATCTCGATTGGTGGTTCAGGAAGCACAAGTTAATCAACAACCGTCAGGACAGCCACAGATGATCGACATTGAGGCCATTGACGATGATGTTGTTGAATCATCCCCTAGAGCTTTTGCTGAAGCTAGAAATAAATCCAGACGGAATCCTATGAATAATATAGTTGATGTGGAAGCAGATATTCTTGATTTTCTGGGGCAGCTTCAACAATTTTCTCAGGGACAACCATCTGACCCTACTACATTTGGTTGTCAAGAGAACATGGTGTCAAATAATAACCGGAGCAAGCGTCGGAGAGAAGTCTCAAGTCAAAAAACTCTGAATTCCGATTTACTAATCAATTTGGAAGCCAGCAACAGCTCTGTGAAAGAGAAGCCTGCTCCACCAAAGGAGCCCAAATTCAGTTGTCCAATATGCATGGGTCCATTAGTGGAGGAAACATCTACAAGGTGTGGTCATATTTTCTGCAAATCATGCATTAAGTCTGCAATAGCTGTCCAGTGTAAATGCCCAACCTGCAGGAAGAGAGTGACTGCCAAAGAACTCATTAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGA MSTQAMRGHTARGYHRRKSLDLDLNIMPPTENRDQGETSRLVVQEAQVNQQPSGQPQMIDIEAIDDDVVESSPRAFAEARNKSRRNPMNNIVDVEADILDFLGQLQQFSQGQPSDPTTFGCQENMVSNNNRSKRRREVSSQKTLNSDLLINLEASNSSVKEKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKSCIKSAIAVQCKCPTCRKRVTAKELIRVFLPGTSLE Homology
BLAST of Sed0020045 vs. NCBI nr
Match: XP_038888129.1 (E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888130.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888131.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888132.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888133.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888134.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888135.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida]) HSP 1 Score: 329.7 bits (844), Expect = 2.0e-86 Identity = 175/230 (76.09%), Postives = 189/230 (82.17%), Query Frame = 0
BLAST of Sed0020045 vs. NCBI nr
Match: XP_022967334.1 (E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967335.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967336.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967337.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967338.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967339.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima]) HSP 1 Score: 328.6 bits (841), Expect = 4.4e-86 Identity = 173/230 (75.22%), Postives = 188/230 (81.74%), Query Frame = 0
BLAST of Sed0020045 vs. NCBI nr
Match: KAG7011333.1 (RING finger protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 328.6 bits (841), Expect = 4.4e-86 Identity = 177/249 (71.08%), Postives = 193/249 (77.51%), Query Frame = 0
BLAST of Sed0020045 vs. NCBI nr
Match: XP_004144388.1 (E3 ubiquitin-protein ligase RNF4 [Cucumis sativus] >XP_031738436.1 E3 ubiquitin-protein ligase RNF4 [Cucumis sativus] >KAE8650852.1 hypothetical protein Csa_000772 [Cucumis sativus]) HSP 1 Score: 326.6 bits (836), Expect = 1.7e-85 Identity = 170/230 (73.91%), Postives = 189/230 (82.17%), Query Frame = 0
BLAST of Sed0020045 vs. NCBI nr
Match: XP_022963653.1 (E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata] >XP_022963654.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata] >XP_022963655.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata] >XP_022963656.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata] >XP_022963657.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata]) HSP 1 Score: 326.2 bits (835), Expect = 2.2e-85 Identity = 172/230 (74.78%), Postives = 186/230 (80.87%), Query Frame = 0
BLAST of Sed0020045 vs. ExPASy Swiss-Prot
Match: Q9CQ29 (RING finger protein 151 OS=Mus musculus OX=10090 GN=Rnf151 PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.1e-07 Identity = 27/59 (45.76%), Postives = 34/59 (57.63%), Query Frame = 0
BLAST of Sed0020045 vs. ExPASy Swiss-Prot
Match: P78317 (E3 ubiquitin-protein ligase RNF4 OS=Homo sapiens OX=9606 GN=RNF4 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.1e-05 Identity = 22/60 (36.67%), Postives = 32/60 (53.33%), Query Frame = 0
BLAST of Sed0020045 vs. ExPASy Swiss-Prot
Match: O88846 (E3 ubiquitin-protein ligase RNF4 OS=Rattus norvegicus OX=10116 GN=Rnf4 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.1e-05 Identity = 22/60 (36.67%), Postives = 32/60 (53.33%), Query Frame = 0
BLAST of Sed0020045 vs. ExPASy Swiss-Prot
Match: Q3MV19 (TNF receptor-associated factor 6-A OS=Xenopus laevis OX=8355 GN=traf6-a PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.1e-05 Identity = 26/56 (46.43%), Postives = 32/56 (57.14%), Query Frame = 0
BLAST of Sed0020045 vs. ExPASy Swiss-Prot
Match: Q9QZS2 (E3 ubiquitin-protein ligase RNF4 OS=Mus musculus OX=10090 GN=Rnf4 PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 5.2e-05 Identity = 26/76 (34.21%), Postives = 37/76 (48.68%), Query Frame = 0
BLAST of Sed0020045 vs. ExPASy TrEMBL
Match: A0A6J1HQI7 (E3 ubiquitin-protein ligase RNF4-like OS=Cucurbita maxima OX=3661 GN=LOC111466888 PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 2.1e-86 Identity = 173/230 (75.22%), Postives = 188/230 (81.74%), Query Frame = 0
BLAST of Sed0020045 vs. ExPASy TrEMBL
Match: A0A6J1HFU4 (E3 ubiquitin-protein ligase RNF4-like OS=Cucurbita moschata OX=3662 GN=LOC111463920 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 1.1e-85 Identity = 172/230 (74.78%), Postives = 186/230 (80.87%), Query Frame = 0
BLAST of Sed0020045 vs. ExPASy TrEMBL
Match: A0A1S3CCB4 (E3 ubiquitin-protein ligase RNF4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499213 PE=4 SV=1) HSP 1 Score: 323.6 bits (828), Expect = 6.9e-85 Identity = 168/230 (73.04%), Postives = 188/230 (81.74%), Query Frame = 0
BLAST of Sed0020045 vs. ExPASy TrEMBL
Match: A0A1S3CBW2 (E3 ubiquitin-protein ligase RNF4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499213 PE=4 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 1.2e-84 Identity = 168/230 (73.04%), Postives = 187/230 (81.30%), Query Frame = 0
BLAST of Sed0020045 vs. ExPASy TrEMBL
Match: A0A6J1E010 (E3 ubiquitin-protein ligase RNF4 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024653 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 3.4e-84 Identity = 171/230 (74.35%), Postives = 187/230 (81.30%), Query Frame = 0
BLAST of Sed0020045 vs. TAIR 10
Match: AT5G48655.2 (RING/U-box superfamily protein ) HSP 1 Score: 149.8 bits (377), Expect = 2.6e-36 Identity = 104/235 (44.26%), Postives = 133/235 (56.60%), Query Frame = 0
BLAST of Sed0020045 vs. TAIR 10
Match: AT5G48655.1 (RING/U-box superfamily protein ) HSP 1 Score: 149.8 bits (377), Expect = 2.6e-36 Identity = 104/235 (44.26%), Postives = 133/235 (56.60%), Query Frame = 0
BLAST of Sed0020045 vs. TAIR 10
Match: AT5G48655.3 (RING/U-box superfamily protein ) HSP 1 Score: 149.8 bits (377), Expect = 2.6e-36 Identity = 104/235 (44.26%), Postives = 133/235 (56.60%), Query Frame = 0
BLAST of Sed0020045 vs. TAIR 10
Match: AT3G07200.1 (RING/U-box superfamily protein ) HSP 1 Score: 125.9 bits (315), Expect = 4.1e-29 Identity = 85/202 (42.08%), Postives = 115/202 (56.93%), Query Frame = 0
BLAST of Sed0020045 vs. TAIR 10
Match: AT3G07200.2 (RING/U-box superfamily protein ) HSP 1 Score: 125.9 bits (315), Expect = 4.1e-29 Identity = 85/202 (42.08%), Postives = 115/202 (56.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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