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Sed0020034 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGCCGACCTCTGCAAAATACTCACGAAATTGAAGAATTGGGTGGAAGGGGTTGGTGTAGAAATGGAAATTACAGAGCTGAAAAGAGAATTTGAGGAGCTGAAGGATGATGCTGAGAAGCAAGAGTTGAGAGTGCGGTACCATGAGACATGAGCTTACTACATAGCCATGGCTTACCTTATCTGGGAAAGGTTCCTTATTGCTTTTGGTACTTCTAATTCTAATTCCCTCAATTATTATTGCTCTCATTTGTGGATGCTTTTGGGGTTCAATCTTTCTTGTAGCCTTTTCTACATTTTGTTCTTCCTTGAGGCTGTTACCATGATATATCGCTCTCAAAACCATTTGGACATTATTTCCCGAACACTTGATGAAATCTCCCAACACATTCTTAACCAAGTTACTAACCCAGATGCTGGCCATCATTTGGAGTCTGGAGATTCGGTTTCACACACTGGGTTCGATTTCAGTTTTCGGGTGCCGGCACTTGATCAGTACCATCCCTATACAATTCTTCACAGGAAACTTTATTTTGCATCCATTCTCTGTGCTCTCCTTGCTCTTACTGCTTTCCAGCTTTGTATGACCTTCAACTCTTCCATGTGCAACTGAATGAGATATTAGTATACAAATAATTCCACCGTCCCAATAGAACTAATTAGGTGTCTGTGTTTTGTGTTCGTAGTAGTAGTTATTGACAGTGTCTTGGTTTTGTCTTCTGTTTCCTATGTAAGGTCTGTATCCTTTAT GGCCGACCTCTGCAAAATACTCACGAAATTGAAGAATTGGGTGGAAGGGGTTGGTGTAGAAATGGAAATTACAGAGCTGAAAAGAGAATTTGAGGAGCTGAAGGATGATGCTGAGAAGCAAGAGTTGAGAGTGCGGTACCATGAGACATGAGCTTACTACATAGCCATGGCTTACCTTATCTGGGAAAGGTTCCTTATTGCTTTTGGTACTTCTAATTCTAATTCCCTCAATTATTATTGCTCTCATTTGTGGATGCTTTTGGGGTTCAATCTTTCTTGTAGCCTTTTCTACATTTTGTTCTTCCTTGAGGCTGTTACCATGATATATCGCTCTCAAAACCATTTGGACATTATTTCCCGAACACTTGATGAAATCTCCCAACACATTCTTAACCAAGTTACTAACCCAGATGCTGGCCATCATTTGGAGTCTGGAGATTCGGTTTCACACACTGGGTTCGATTTCAGTTTTCGGGTGCCGGCACTTGATCAGTACCATCCCTATACAATTCTTCACAGGAAACTTTATTTTGCATCCATTCTCTGTGCTCTCCTTGCTCTTACTGCTTTCCAGCTTTGTATGACCTTCAACTCTTCCATGTGCAACTGAATGAGATATTAGTATACAAATAATTCCACCGTCCCAATAGAACTAATTAGGTGTCTGTGTTTTGTGTTCGTAGTAGTAGTTATTGACAGTGTCTTGGTTTTGTCTTCTGTTTCCTATGTAAGGTCTGTATCCTTTAT ATGGCTTACCTTATCTGGGAAAGGTTCCTTATTGCTTTTGGTACTTCTAATTCTAATTCCCTCAATTATTATTGCTCTCATTTGTGGATGCTTTTGGGGTTCAATCTTTCTTGTAGCCTTTTCTACATTTTGTTCTTCCTTGAGGCTGTTACCATGATATATCGCTCTCAAAACCATTTGGACATTATTTCCCGAACACTTGATGAAATCTCCCAACACATTCTTAACCAAGTTACTAACCCAGATGCTGGCCATCATTTGGAGTCTGGAGATTCGGTTTCACACACTGGGTTCGATTTCAGTTTTCGGGTGCCGGCACTTGATCAGTACCATCCCTATACAATTCTTCACAGGAAACTTTATTTTGCATCCATTCTCTGTGCTCTCCTTGCTCTTACTGCTTTCCAGCTTTGTATGACCTTCAACTCTTCCATGTGCAACTGA MAYLIWERFLIAFGTSNSNSLNYYCSHLWMLLGFNLSCSLFYILFFLEAVTMIYRSQNHLDIISRTLDEISQHILNQVTNPDAGHHLESGDSVSHTGFDFSFRVPALDQYHPYTILHRKLYFASILCALLALTAFQLCMTFNSSMCN Homology
BLAST of Sed0020034 vs. NCBI nr
Match: ADN33782.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 106.3 bits (264), Expect = 2.3e-19 Identity = 70/151 (46.36%), Postives = 98/151 (64.90%), Query Frame = 0
BLAST of Sed0020034 vs. NCBI nr
Match: KAA0042580.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05984.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 105.9 bits (263), Expect = 3.0e-19 Identity = 70/151 (46.36%), Postives = 97/151 (64.24%), Query Frame = 0
BLAST of Sed0020034 vs. NCBI nr
Match: KAA0042578.1 (WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa] >TYK05982.1 WD repeat-containing protein 91-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 101.3 bits (251), Expect = 7.4e-18 Identity = 69/153 (45.10%), Postives = 94/153 (61.44%), Query Frame = 0
BLAST of Sed0020034 vs. NCBI nr
Match: XP_022157130.1 (uncharacterized protein LOC111023927 [Momordica charantia]) HSP 1 Score: 95.9 bits (237), Expect = 3.1e-16 Identity = 64/140 (45.71%), Postives = 86/140 (61.43%), Query Frame = 0
BLAST of Sed0020034 vs. NCBI nr
Match: XP_022157172.1 (uncharacterized protein LOC111023951 [Momordica charantia]) HSP 1 Score: 92.4 bits (228), Expect = 3.4e-15 Identity = 54/138 (39.13%), Postives = 82/138 (59.42%), Query Frame = 0
BLAST of Sed0020034 vs. ExPASy TrEMBL
Match: E5GBE1 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.1e-19 Identity = 70/151 (46.36%), Postives = 98/151 (64.90%), Query Frame = 0
BLAST of Sed0020034 vs. ExPASy TrEMBL
Match: A0A5A7TGW8 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00800 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19 Identity = 70/151 (46.36%), Postives = 97/151 (64.24%), Query Frame = 0
BLAST of Sed0020034 vs. ExPASy TrEMBL
Match: A0A5D3C430 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00780 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 3.6e-18 Identity = 69/153 (45.10%), Postives = 94/153 (61.44%), Query Frame = 0
BLAST of Sed0020034 vs. ExPASy TrEMBL
Match: A0A0A0KM15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139820 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.0e-17 Identity = 70/151 (46.36%), Postives = 93/151 (61.59%), Query Frame = 0
BLAST of Sed0020034 vs. ExPASy TrEMBL
Match: A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16 Identity = 64/140 (45.71%), Postives = 86/140 (61.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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