Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCAAAAAGAGAAAAAAACATCCTTTAACAAAATCAATCCCCATTTTCATTCTCCACTCCAACGAAATCCCATTTTCTCATGGCAGAAACCAAGGATTCAAGCACCCACATAGTCGAAATCCCATTAGAACAAAATGAGCAAAACCAAATGCTTACGATCTCTGCAATCCAACAACACCCACTGCGGCAAATCTCCGAAAGCTCGGGCCATCTATTGCTGTTGAAACTCTGGCAGCGCGACGAGCATCTCTTCGGCCTCCGAATCGGCCGCCGAGAGACCAAATTGGAGTCTCTAAAGCAACAGATCTTCCAACTCTGCTGCTACTTCTTCCTCTTCCACGCCCTCTCCCTCACCCTCTTGTTCACTTCCTCCGATCCCAACGCTTGCCGCAAATGGTGGGTTCCCGCGGTGCCGGTGGCCGCAACGTCGGGCGTGTTCCTGATGGCGGTGCAGCTGAAGCTGTGGCTGCATTGGAAGGCGGCACGGCGGCTGCAGAGGGAGCGGAGCGAGAGCCGAGCGCTTACGAGATGCGTTCAAGAGCTGAGAATGAAAGGGTCTTGTTTTAATTTGGGTAAAGAGCCTCATGTTGGGAACAGGATGAAGAGCTCTAGTGTGGAGATTAAATGGGGGCTTCTCACTTGGCTTTCTAGGAATTTTGTTGCTATTTCTCTTGCTTGCTTTTCAGGGCTTGTTTTTGCTGCTTCAAAGTTCATTCTTTGTGGGGTTTGAAGTGTTGTACGTAATTTTTGTCAATTTGGAAACTTATTGTCTAAATGGATCCAATTTAGAAGGAAATGTCAAAATGGGTTGTGATCAGCCTAATTT
mRNA sequence
GCCAAAAAGAGAAAAAAACATCCTTTAACAAAATCAATCCCCATTTTCATTCTCCACTCCAACGAAATCCCATTTTCTCATGGCAGAAACCAAGGATTCAAGCACCCACATAGTCGAAATCCCATTAGAACAAAATGAGCAAAACCAAATGCTTACGATCTCTGCAATCCAACAACACCCACTGCGGCAAATCTCCGAAAGCTCGGGCCATCTATTGCTGTTGAAACTCTGGCAGCGCGACGAGCATCTCTTCGGCCTCCGAATCGGCCGCCGAGAGACCAAATTGGAGTCTCTAAAGCAACAGATCTTCCAACTCTGCTGCTACTTCTTCCTCTTCCACGCCCTCTCCCTCACCCTCTTGTTCACTTCCTCCGATCCCAACGCTTGCCGCAAATGGTGGGTTCCCGCGGTGCCGGTGGCCGCAACGTCGGGCGTGTTCCTGATGGCGGTGCAGCTGAAGCTGTGGCTGCATTGGAAGGCGGCACGGCGGCTGCAGAGGGAGCGGAGCGAGAGCCGAGCGCTTACGAGATGCGTTCAAGAGCTGAGAATGAAAGGGTCTTGTTTTAATTTGGGTAAAGAGCCTCATGTTGGGAACAGGATGAAGAGCTCTAGTGTGGAGATTAAATGGGGGCTTCTCACTTGGCTTTCTAGGAATTTTGTTGCTATTTCTCTTGCTTGCTTTTCAGGGCTTGTTTTTGCTGCTTCAAAGTTCATTCTTTGTGGGGTTTGAAGTGTTGTACGTAATTTTTGTCAATTTGGAAACTTATTGTCTAAATGGATCCAATTTAGAAGGAAATGTCAAAATGGGTTGTGATCAGCCTAATTT
Coding sequence (CDS)
ATGGCAGAAACCAAGGATTCAAGCACCCACATAGTCGAAATCCCATTAGAACAAAATGAGCAAAACCAAATGCTTACGATCTCTGCAATCCAACAACACCCACTGCGGCAAATCTCCGAAAGCTCGGGCCATCTATTGCTGTTGAAACTCTGGCAGCGCGACGAGCATCTCTTCGGCCTCCGAATCGGCCGCCGAGAGACCAAATTGGAGTCTCTAAAGCAACAGATCTTCCAACTCTGCTGCTACTTCTTCCTCTTCCACGCCCTCTCCCTCACCCTCTTGTTCACTTCCTCCGATCCCAACGCTTGCCGCAAATGGTGGGTTCCCGCGGTGCCGGTGGCCGCAACGTCGGGCGTGTTCCTGATGGCGGTGCAGCTGAAGCTGTGGCTGCATTGGAAGGCGGCACGGCGGCTGCAGAGGGAGCGGAGCGAGAGCCGAGCGCTTACGAGATGCGTTCAAGAGCTGAGAATGAAAGGGTCTTGTTTTAATTTGGGTAAAGAGCCTCATGTTGGGAACAGGATGAAGAGCTCTAGTGTGGAGATTAAATGGGGGCTTCTCACTTGGCTTTCTAGGAATTTTGTTGCTATTTCTCTTGCTTGCTTTTCAGGGCTTGTTTTTGCTGCTTCAAAGTTCATTCTTTGTGGGGTTTGA
Protein sequence
MAETKDSSTHIVEIPLEQNEQNQMLTISAIQQHPLRQISESSGHLLLLKLWQRDEHLFGLRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNACRKWWVPAVPVAATSGVFLMAVQLKLWLHWKAARRLQRERSESRALTRCVQELRMKGSCFNLGKEPHVGNRMKSSSVEIKWGLLTWLSRNFVAISLACFSGLVFAASKFILCGV
Homology
BLAST of Sed0019904 vs. NCBI nr
Match:
XP_038905570.1 (uncharacterized protein LOC120091553 [Benincasa hispida] >XP_038905571.1 uncharacterized protein LOC120091553 [Benincasa hispida])
HSP 1 Score: 350.1 bits (897), Expect = 1.3e-92
Identity = 174/216 (80.56%), Postives = 192/216 (88.89%), Query Frame = 0
Query: 1 MAETKDSSTHIVEIPLEQ--NEQNQMLTISAIQQHPLRQISESSGHLLLLKLWQRDEHLF 60
MAETKDS HIVEIP+EQ + QNQ IS IQ HPLRQISESSGHLLLLKLWQRDEHLF
Sbjct: 1 MAETKDSGAHIVEIPVEQENHTQNQNPMISVIQHHPLRQISESSGHLLLLKLWQRDEHLF 60
Query: 61 GLRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNACRKWWVPAVPVAATSG 120
GLRIGRRETK+ESLKQQIFQLCC+FFLFHALSLTLL+TSSDPN C+KWWVPAV + ATSG
Sbjct: 61 GLRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPNVCKKWWVPAVAMGATSG 120
Query: 121 VFLMAVQLKLWLHWKAARRLQRERSESRALTRCVQELRMKGSCFNLGKEPHVGNRMKSSS 180
VF++ VQLKLWL+WKA+ +LQRE++E+RALTRCVQELRMKGSCFNL KEP +GNRMKSSS
Sbjct: 121 VFVIVVQLKLWLYWKASGQLQREKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSS 180
Query: 181 VEIKWGLLTWLSRNFVAISLACFSGLVFAASKFILC 215
VEIKWG LTW SRNF+ I L FS +VFAASKFILC
Sbjct: 181 VEIKWGPLTWFSRNFITIFLLGFSAIVFAASKFILC 216
BLAST of Sed0019904 vs. NCBI nr
Match:
XP_008449068.1 (PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo] >XP_008449069.1 PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo])
HSP 1 Score: 349.7 bits (896), Expect = 1.7e-92
Identity = 173/216 (80.09%), Postives = 191/216 (88.43%), Query Frame = 0
Query: 1 MAETKDS-STHIVEIPLEQNEQNQMLTISAIQQHPLRQISESSGHLLLLKLWQRDEHLFG 60
MA+TKDS + HIVEIP+EQ Q L IS IQ HPLRQISESSGHLLLLKLWQRDEHLFG
Sbjct: 1 MAQTKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60
Query: 61 LRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNACRKWWVPAVPVAATSGV 120
LRIGRRETK+ESLKQQIFQLCC+FFLFHALSLTLL+TSSDP C+KWWVPAV + ATSGV
Sbjct: 61 LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATSGV 120
Query: 121 FLMAVQLKLWLHWKAARRLQRERSESRALTRCVQELRMKGSCFNLGKEPHVGNRMKSSSV 180
F++ VQLKLW++WKA +LQRE+SE+RALTRC QELRMKGSCFNL KEP +GNRMKSSSV
Sbjct: 121 FVIVVQLKLWMYWKARGQLQREKSENRALTRCAQELRMKGSCFNLSKEPQIGNRMKSSSV 180
Query: 181 EIKWGLLTWLSRNFVAISLACFSGLVFAASKFILCG 216
EIKWG LTW SRNF+AISL FS +VFAASKFILCG
Sbjct: 181 EIKWGPLTWFSRNFIAISLLGFSAIVFAASKFILCG 216
BLAST of Sed0019904 vs. NCBI nr
Match:
KAG7015562.1 (hypothetical protein SDJN02_23198, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 348.6 bits (893), Expect = 3.9e-92
Identity = 174/216 (80.56%), Postives = 191/216 (88.43%), Query Frame = 0
Query: 3 ETKDS--STHIVEIPLEQNEQNQMLTISAIQQHPLRQISESSGHLLLLKLWQRDEHLFGL 62
ETKDS + H+VEIP E NQ + IS I+QHPLRQISESSGHLLLLKLWQR+EHLFGL
Sbjct: 4 ETKDSGAAAHVVEIPAE----NQNVMISVIEQHPLRQISESSGHLLLLKLWQREEHLFGL 63
Query: 63 RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNACRKWWVPAVPVAATSGVF 122
RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPN C KWWVP V + ATSGVF
Sbjct: 64 RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGATSGVF 123
Query: 123 LMAVQLKLWLHWKAARRLQRERSESRALTRCVQELRMKGSCFNLGKEPHVGNRMKSSSVE 182
++ VQLKLWL+WKA+ +LQRE+SE+RALTRCVQELRMKGSCFNL KEP +G+RMKSSSVE
Sbjct: 124 VIVVQLKLWLYWKASAQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGHRMKSSSVE 183
Query: 183 IKWGLLTWLSRNFVAISLACFSGLVFAASKFILCGV 217
IKWG LTWLSRNFV I L CFSG+VF ASKFILCG+
Sbjct: 184 IKWGPLTWLSRNFVTIFLLCFSGIVFGASKFILCGL 215
BLAST of Sed0019904 vs. NCBI nr
Match:
XP_022965180.1 (uncharacterized protein LOC111465114 [Cucurbita maxima])
HSP 1 Score: 347.4 bits (890), Expect = 8.7e-92
Identity = 175/216 (81.02%), Postives = 191/216 (88.43%), Query Frame = 0
Query: 3 ETKDS--STHIVEIPLEQNEQNQMLTISAIQQHPLRQISESSGHLLLLKLWQRDEHLFGL 62
ETKDS +THIVEIP E NQ + IS I+QHPLRQISESSGHLLLLKLWQR+EHLFGL
Sbjct: 4 ETKDSGAATHIVEIPAE----NQNIMISVIEQHPLRQISESSGHLLLLKLWQREEHLFGL 63
Query: 63 RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNACRKWWVPAVPVAATSGVF 122
RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPN C KWWVP V + ATSGVF
Sbjct: 64 RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGATSGVF 123
Query: 123 LMAVQLKLWLHWKAARRLQRERSESRALTRCVQELRMKGSCFNLGKEPHVGNRMKSSSVE 182
++ VQLKLWL+WKA+ +LQRE+SE+RALTR VQELRMKGSCFNL KEP +G+RMKSSSVE
Sbjct: 124 VIVVQLKLWLYWKASAQLQREKSENRALTRIVQELRMKGSCFNLSKEPQIGHRMKSSSVE 183
Query: 183 IKWGLLTWLSRNFVAISLACFSGLVFAASKFILCGV 217
IKWG LTWLSRNFV I L CFSG+VF ASKFILCG+
Sbjct: 184 IKWGPLTWLSRNFVTIFLLCFSGIVFGASKFILCGL 215
BLAST of Sed0019904 vs. NCBI nr
Match:
XP_023553388.1 (uncharacterized protein LOC111810817 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 346.7 bits (888), Expect = 1.5e-91
Identity = 171/215 (79.53%), Postives = 191/215 (88.84%), Query Frame = 0
Query: 3 ETKDS-STHIVEIPLEQNEQNQMLTISAIQQHPLRQISESSGHLLLLKLWQRDEHLFGLR 62
ET+DS + H+VEIP E NQ + IS I+QHPLRQISESSGHLLLLKLWQR+EHLFGLR
Sbjct: 4 ETRDSGAAHVVEIPAE----NQNVMISVIEQHPLRQISESSGHLLLLKLWQREEHLFGLR 63
Query: 63 IGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNACRKWWVPAVPVAATSGVFL 122
+GRRETK+ESLKQQIFQLCCYFFLFHALSLTLLFTSSDPN C KWWVP V + ATSGVF+
Sbjct: 64 VGRRETKMESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGATSGVFV 123
Query: 123 MAVQLKLWLHWKAARRLQRERSESRALTRCVQELRMKGSCFNLGKEPHVGNRMKSSSVEI 182
+ VQLKLWL+WKA+ +LQRE+SE+RALTRCVQELRMKGSCFNL KEP +G+RMKSSSVEI
Sbjct: 124 IVVQLKLWLYWKASAQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGHRMKSSSVEI 183
Query: 183 KWGLLTWLSRNFVAISLACFSGLVFAASKFILCGV 217
KWG LTWLSRNFV I L CFSG+VF ASKFILCG+
Sbjct: 184 KWGPLTWLSRNFVTIVLLCFSGIVFGASKFILCGL 214
BLAST of Sed0019904 vs. ExPASy TrEMBL
Match:
A0A1S3BL81 (uncharacterized protein LOC103491049 OS=Cucumis melo OX=3656 GN=LOC103491049 PE=4 SV=1)
HSP 1 Score: 349.7 bits (896), Expect = 8.4e-93
Identity = 173/216 (80.09%), Postives = 191/216 (88.43%), Query Frame = 0
Query: 1 MAETKDS-STHIVEIPLEQNEQNQMLTISAIQQHPLRQISESSGHLLLLKLWQRDEHLFG 60
MA+TKDS + HIVEIP+EQ Q L IS IQ HPLRQISESSGHLLLLKLWQRDEHLFG
Sbjct: 1 MAQTKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60
Query: 61 LRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNACRKWWVPAVPVAATSGV 120
LRIGRRETK+ESLKQQIFQLCC+FFLFHALSLTLL+TSSDP C+KWWVPAV + ATSGV
Sbjct: 61 LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATSGV 120
Query: 121 FLMAVQLKLWLHWKAARRLQRERSESRALTRCVQELRMKGSCFNLGKEPHVGNRMKSSSV 180
F++ VQLKLW++WKA +LQRE+SE+RALTRC QELRMKGSCFNL KEP +GNRMKSSSV
Sbjct: 121 FVIVVQLKLWMYWKARGQLQREKSENRALTRCAQELRMKGSCFNLSKEPQIGNRMKSSSV 180
Query: 181 EIKWGLLTWLSRNFVAISLACFSGLVFAASKFILCG 216
EIKWG LTW SRNF+AISL FS +VFAASKFILCG
Sbjct: 181 EIKWGPLTWFSRNFIAISLLGFSAIVFAASKFILCG 216
BLAST of Sed0019904 vs. ExPASy TrEMBL
Match:
A0A6J1HN07 (uncharacterized protein LOC111465114 OS=Cucurbita maxima OX=3661 GN=LOC111465114 PE=4 SV=1)
HSP 1 Score: 347.4 bits (890), Expect = 4.2e-92
Identity = 175/216 (81.02%), Postives = 191/216 (88.43%), Query Frame = 0
Query: 3 ETKDS--STHIVEIPLEQNEQNQMLTISAIQQHPLRQISESSGHLLLLKLWQRDEHLFGL 62
ETKDS +THIVEIP E NQ + IS I+QHPLRQISESSGHLLLLKLWQR+EHLFGL
Sbjct: 4 ETKDSGAATHIVEIPAE----NQNIMISVIEQHPLRQISESSGHLLLLKLWQREEHLFGL 63
Query: 63 RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNACRKWWVPAVPVAATSGVF 122
RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPN C KWWVP V + ATSGVF
Sbjct: 64 RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGATSGVF 123
Query: 123 LMAVQLKLWLHWKAARRLQRERSESRALTRCVQELRMKGSCFNLGKEPHVGNRMKSSSVE 182
++ VQLKLWL+WKA+ +LQRE+SE+RALTR VQELRMKGSCFNL KEP +G+RMKSSSVE
Sbjct: 124 VIVVQLKLWLYWKASAQLQREKSENRALTRIVQELRMKGSCFNLSKEPQIGHRMKSSSVE 183
Query: 183 IKWGLLTWLSRNFVAISLACFSGLVFAASKFILCGV 217
IKWG LTWLSRNFV I L CFSG+VF ASKFILCG+
Sbjct: 184 IKWGPLTWLSRNFVTIFLLCFSGIVFGASKFILCGL 215
BLAST of Sed0019904 vs. ExPASy TrEMBL
Match:
A0A0A0L2U7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061020 PE=4 SV=1)
HSP 1 Score: 345.1 bits (884), Expect = 2.1e-91
Identity = 169/216 (78.24%), Postives = 189/216 (87.50%), Query Frame = 0
Query: 1 MAETKDS-STHIVEIPLEQNEQNQMLTISAIQQHPLRQISESSGHLLLLKLWQRDEHLFG 60
MAETKDS + HIVEIP+EQ Q L IS IQ HPLRQISESSGHLLLLKLWQRDEHLFG
Sbjct: 1 MAETKDSTAAHIVEIPVEQENHTQNLMISVIQHHPLRQISESSGHLLLLKLWQRDEHLFG 60
Query: 61 LRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNACRKWWVPAVPVAATSGV 120
LRIGRRETK+ESLKQQIFQLCC+FFLFHALSLTLL+TSSDP C+KWWVPAV + ATSGV
Sbjct: 61 LRIGRRETKMESLKQQIFQLCCFFFLFHALSLTLLYTSSDPIVCKKWWVPAVVIGATSGV 120
Query: 121 FLMAVQLKLWLHWKAARRLQRERSESRALTRCVQELRMKGSCFNLGKEPHVGNRMKSSSV 180
F++ VQLKLW++WKA +LQ+E++E+RALTRCVQELRMKGSCFNL KEP +GNRMKSSSV
Sbjct: 121 FVIVVQLKLWMYWKARGQLQKEKTENRALTRCVQELRMKGSCFNLSKEPQIGNRMKSSSV 180
Query: 181 EIKWGLLTWLSRNFVAISLACFSGLVFAASKFILCG 216
EIKWG LTW SRNF+ ISL FS ++F SKFILCG
Sbjct: 181 EIKWGPLTWFSRNFITISLLGFSAIIFVTSKFILCG 216
BLAST of Sed0019904 vs. ExPASy TrEMBL
Match:
A0A6J1EWB5 (uncharacterized protein LOC111438709 OS=Cucurbita moschata OX=3662 GN=LOC111438709 PE=4 SV=1)
HSP 1 Score: 343.6 bits (880), Expect = 6.1e-91
Identity = 173/216 (80.09%), Postives = 190/216 (87.96%), Query Frame = 0
Query: 3 ETKDS--STHIVEIPLEQNEQNQMLTISAIQQHPLRQISESSGHLLLLKLWQRDEHLFGL 62
ETKDS + H+VEIP E NQ + IS I+QHPLRQISESSGHLLLLKLWQR+EHLFGL
Sbjct: 4 ETKDSGAAAHVVEIPAE----NQNVMISVIEQHPLRQISESSGHLLLLKLWQREEHLFGL 63
Query: 63 RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNACRKWWVPAVPVAATSGVF 122
RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPN C KWWVP V + ATSGVF
Sbjct: 64 RIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPNVCHKWWVPGVAMGATSGVF 123
Query: 123 LMAVQLKLWLHWKAARRLQRERSESRALTRCVQELRMKGSCFNLGKEPHVGNRMKSSSVE 182
++ VQLKLWL+WKA+ +LQRE+SE+RALTRCVQELRMKGSCFNL KEP +G+RMKSSSVE
Sbjct: 124 VIVVQLKLWLYWKASAQLQREKSENRALTRCVQELRMKGSCFNLSKEPQIGHRMKSSSVE 183
Query: 183 IKWGLLTWLSRNFVAISLACFSGLVFAASKFILCGV 217
IKWG LT LSRNFV I L CFSG+VF ASKFILCG+
Sbjct: 184 IKWGPLTLLSRNFVTIVLLCFSGIVFGASKFILCGL 215
BLAST of Sed0019904 vs. ExPASy TrEMBL
Match:
A0A5N6RKR8 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016951 PE=4 SV=1)
HSP 1 Score: 263.1 bits (671), Expect = 1.0e-66
Identity = 134/227 (59.03%), Postives = 173/227 (76.21%), Query Frame = 0
Query: 1 MAETKDSSTHIVEIPLEQNEQNQML----TIS-AIQQHPLRQISESSGHLLLLKLWQRDE 60
MAE KD+ HIVEIP+++ +Q+++L TIS AIQ HPL +ISES GHLLLLKLWQR+E
Sbjct: 1 MAEMKDA--HIVEIPVDEEQQHKLLSAMNTISAAIQHHPLMEISESPGHLLLLKLWQREE 60
Query: 61 HLFGLRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSS-------DPNACRKWWV 120
LFG RI +ET+L+S+K+++FQLCC+FF+FH LT+LF SS + C+KWW+
Sbjct: 61 DLFGRRIALKETRLDSIKRELFQLCCFFFIFHGFFLTILFNSSVDSQEEDTSHTCKKWWI 120
Query: 121 PAVPVAATSGVFLMAVQLKLWLHWKAARRLQRERSESRALTRCVQELRMKGSCFNLGKEP 180
P + +TS V + VQ+KLW WK ++LQRER++SRA+TRC+QELRMKG+ F+L KEP
Sbjct: 121 PGLLSVSTSLVLVFLVQVKLWRFWKVWKQLQRERTDSRAVTRCIQELRMKGASFDLSKEP 180
Query: 181 HVGNRMKSSSVEIKWGLLTWLSRNFVAISLACFSGLVFAASKFILCG 216
H G RMKSSSVEIKW LTW S+ + I+L CF+GLVF ASKFILCG
Sbjct: 181 HGGKRMKSSSVEIKWKPLTWFSQYLITIALVCFAGLVFPASKFILCG 225
BLAST of Sed0019904 vs. TAIR 10
Match:
AT5G56120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12870.1); Has 77 Blast hits to 75 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 226.9 bits (577), Expect = 1.6e-59
Identity = 123/237 (51.90%), Postives = 160/237 (67.51%), Query Frame = 0
Query: 1 MAETKDSSTHIVEIPL-----EQNEQNQMLTIS--------AIQQHPLRQISESSGHLLL 60
MA TKDS H+VEIP+ E+ +Q Q++ +S IQQHPL +ISES GHLLL
Sbjct: 1 MAGTKDS--HVVEIPVDEEHKERQQQQQLVAVSNPGMGILKVIQQHPLSEISESPGHLLL 60
Query: 61 LKLWQRDEHLFGLRIGRRETKLESLKQQIFQLCCYFFLFHALSLTLLFTSSDPN------ 120
LKLWQR+E LF R+ +E++LES+K++IFQLCC+F +FH TL+++SS +
Sbjct: 61 LKLWQREEDLFCRRVLLKESRLESIKREIFQLCCFFLVFHGFFFTLVYSSSCSDDADVVK 120
Query: 121 ---ACRKWWVPAVPVAATSGVFLMAVQLKLWLHWKAARRLQRERSESRALTRCVQELRMK 180
C+KWW+P+ ATS V + VQ KL++ WK R + RER+++R LTRCV ELRMK
Sbjct: 121 SNAVCKKWWIPSAVSLATSLVLVFLVQAKLFVFWKVYRGVNRERNDNRTLTRCVLELRMK 180
Query: 181 GSCFNLGKEPHVGNRMKSSSVEIKWGLLTWLSRNFVAISLACFSGLVFAASKFILCG 216
GS F+L KEP G RMKSSSVEIKW +TW S+ + I L C +GL F SKFILCG
Sbjct: 181 GSSFDLSKEPMSGKRMKSSSVEIKWKPVTWFSQYLITIVLLCSAGLFFPVSKFILCG 235
BLAST of Sed0019904 vs. TAIR 10
Match:
AT3G12870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G56120.1); Has 70 Blast hits to 70 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 118.2 bits (295), Expect = 8.0e-27
Identity = 70/195 (35.90%), Postives = 117/195 (60.00%), Query Frame = 0
Query: 27 ISAIQQHPLRQISESSGHLLLLKLWQRDEHLFGLRIGRRETKLESLKQQIFQLCCYFFLF 86
+ A +HPL QI+++ H LLLK W ++E L R+ +E++++S++++I QL +FFLF
Sbjct: 12 MEAKTRHPLHQIADTPTHKLLLKQWLKEEELILSRVSHKESQIDSVRREITQLYIFFFLF 71
Query: 87 HALSLTLLF-------TSSDPNACRKWWVPAVPVAATSGVFLMAVQLKLWLHWKAARRLQ 146
H++SL LLF +S+ +AC++ W+P++ +S + AV+ K + + L+
Sbjct: 72 HSISLLLLFHASSSSSSSASSSACKRSWIPSLCALLSSLGIIWAVRYKSEVESHLEKLLE 131
Query: 147 RERSESRALTRCVQELRMKGSCFNLGKEPHVGNRMKSSSVEIKWGLLTWLSRNFVAISLA 206
RE+ +++ L +CV+EL+ KG F+L KE R KS VE K + W +R+FV +
Sbjct: 132 REKEDAKLLRKCVEELKKKGIEFDLLKEVDALRRAKSLRVESK-PVKKWSARDFVTLFFF 191
Query: 207 CFSGLVFAASKFILC 215
S LV A + ILC
Sbjct: 192 SVSCLVLAMIRLILC 205
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038905570.1 | 1.3e-92 | 80.56 | uncharacterized protein LOC120091553 [Benincasa hispida] >XP_038905571.1 unchara... | [more] |
XP_008449068.1 | 1.7e-92 | 80.09 | PREDICTED: uncharacterized protein LOC103491049 [Cucumis melo] >XP_008449069.1 P... | [more] |
KAG7015562.1 | 3.9e-92 | 80.56 | hypothetical protein SDJN02_23198, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022965180.1 | 8.7e-92 | 81.02 | uncharacterized protein LOC111465114 [Cucurbita maxima] | [more] |
XP_023553388.1 | 1.5e-91 | 79.53 | uncharacterized protein LOC111810817 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A1S3BL81 | 8.4e-93 | 80.09 | uncharacterized protein LOC103491049 OS=Cucumis melo OX=3656 GN=LOC103491049 PE=... | [more] |
A0A6J1HN07 | 4.2e-92 | 81.02 | uncharacterized protein LOC111465114 OS=Cucurbita maxima OX=3661 GN=LOC111465114... | [more] |
A0A0A0L2U7 | 2.1e-91 | 78.24 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G061020 PE=4 SV=1 | [more] |
A0A6J1EWB5 | 6.1e-91 | 80.09 | uncharacterized protein LOC111438709 OS=Cucurbita moschata OX=3662 GN=LOC1114387... | [more] |
A0A5N6RKR8 | 1.0e-66 | 59.03 | Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_016951 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT5G56120.1 | 1.6e-59 | 51.90 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT3G12870.1 | 8.0e-27 | 35.90 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |