Sed0019902 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGATCGAATCAAGAACATCAGCGCATACTCCAGCGGCGCCGGCGACCGTGAAAAGAATCAAAAGAGAAAGCGATGTCTGGCGCCGGCGCCGGCGACGAAGAAACAGAGCAAGAAGAAAACAGAGTCGCCGTTGATTCCTGAAATCCCGACGGCCGATAAAGATCGGAATGAGAAAAAAGTCACCCACTACGGCGGCGGCGACGACCGTGAGAGGAATCGAAATAGAAGGAGAGGACCGGCGCCGGGGACGAAGAACCATAGCAAGAAGAAAACAGAGCCGCCGTCGGTTTCTGAAATGCCGACGGCGATGAGAAATCGAATTGAGAAAATGGGTGGTTCCAATTTCGAACTGGTAATCGAAAAACAACTTGTCGACACGGATTTGAACAAGAATCACGGGCGATTATCTCTTCCACCGCAAATGGTAAGAACAGAATTCGTAACAGAGGAGGAAAAGCAACTGTTGGATGAAAATGAGGGGAAGAAAAAGAAAGGGATGAATGTTGCGATAATGGATGATGTAATTGGAGAAAGATCGATTCGTTTGAAGAAATGGAAGATTGGGAGTGAAGATGTGTATTGTTTGATGACACAGTGGAATTCGTTTGTGAAAGAAAGTGGGCTTAGAACTGGAGATTTGATCCAACTTTGGAGTTTTAGAAGAGATTGTTTCGATGAAGAAAAAGAGGCCAATGTTTCGAAGCTCTGTTTCGCCATGGTTAAGCTTGAGGTTGAAGATTAA ATGAAAGATCGAATCAAGAACATCAGCGCATACTCCAGCGGCGCCGGCGACCGTGAAAAGAATCAAAAGAGAAAGCGATGTCTGGCGCCGGCGCCGGCGACGAAGAAACAGAGCAAGAAGAAAACAGAGTCGCCGTTGATTCCTGAAATCCCGACGGCCGATAAAGATCGGAATGAGAAAAAAGTCACCCACTACGGCGGCGGCGACGACCGTGAGAGGAATCGAAATAGAAGGAGAGGACCGGCGCCGGGGACGAAGAACCATAGCAAGAAGAAAACAGAGCCGCCGTCGGTTTCTGAAATGCCGACGGCGATGAGAAATCGAATTGAGAAAATGGGTGGTTCCAATTTCGAACTGGTAATCGAAAAACAACTTGTCGACACGGATTTGAACAAGAATCACGGGCGATTATCTCTTCCACCGCAAATGGTAAGAACAGAATTCGTAACAGAGGAGGAAAAGCAACTGTTGGATGAAAATGAGGGGAAGAAAAAGAAAGGGATGAATGTTGCGATAATGGATGATGTAATTGGAGAAAGATCGATTCGTTTGAAGAAATGGAAGATTGGGAGTGAAGATGTGTATTGTTTGATGACACAGTGGAATTCGTTTGTGAAAGAAAGTGGGCTTAGAACTGGAGATTTGATCCAACTTTGGAGTTTTAGAAGAGATTGTTTCGATGAAGAAAAAGAGGCCAATGTTTCGAAGCTCTGTTTCGCCATGGTTAAGCTTGAGGTTGAAGATTAA ATGAAAGATCGAATCAAGAACATCAGCGCATACTCCAGCGGCGCCGGCGACCGTGAAAAGAATCAAAAGAGAAAGCGATGTCTGGCGCCGGCGCCGGCGACGAAGAAACAGAGCAAGAAGAAAACAGAGTCGCCGTTGATTCCTGAAATCCCGACGGCCGATAAAGATCGGAATGAGAAAAAAGTCACCCACTACGGCGGCGGCGACGACCGTGAGAGGAATCGAAATAGAAGGAGAGGACCGGCGCCGGGGACGAAGAACCATAGCAAGAAGAAAACAGAGCCGCCGTCGGTTTCTGAAATGCCGACGGCGATGAGAAATCGAATTGAGAAAATGGGTGGTTCCAATTTCGAACTGGTAATCGAAAAACAACTTGTCGACACGGATTTGAACAAGAATCACGGGCGATTATCTCTTCCACCGCAAATGGTAAGAACAGAATTCGTAACAGAGGAGGAAAAGCAACTGTTGGATGAAAATGAGGGGAAGAAAAAGAAAGGGATGAATGTTGCGATAATGGATGATGTAATTGGAGAAAGATCGATTCGTTTGAAGAAATGGAAGATTGGGAGTGAAGATGTGTATTGTTTGATGACACAGTGGAATTCGTTTGTGAAAGAAAGTGGGCTTAGAACTGGAGATTTGATCCAACTTTGGAGTTTTAGAAGAGATTGTTTCGATGAAGAAAAAGAGGCCAATGTTTCGAAGCTCTGTTTCGCCATGGTTAAGCTTGAGGTTGAAGATTAA MKDRIKNISAYSSGAGDREKNQKRKRCLAPAPATKKQSKKKTESPLIPEIPTADKDRNEKKVTHYGGGDDRERNRNRRRGPAPGTKNHSKKKTEPPSVSEMPTAMRNRIEKMGGSNFELVIEKQLVDTDLNKNHGRLSLPPQMVRTEFVTEEEKQLLDENEGKKKKGMNVAIMDDVIGERSIRLKKWKIGSEDVYCLMTQWNSFVKESGLRTGDLIQLWSFRRDCFDEEKEANVSKLCFAMVKLEVED Homology
BLAST of Sed0019902 vs. NCBI nr
Match: XP_038874960.1 (B3 domain-containing protein At2g31420-like [Benincasa hispida]) HSP 1 Score: 192.2 bits (487), Expect = 5.3e-45 Identity = 103/179 (57.54%), Postives = 125/179 (69.83%), Query Frame = 0
BLAST of Sed0019902 vs. NCBI nr
Match: XP_038875653.1 (B3 domain-containing protein At1g05920-like [Benincasa hispida]) HSP 1 Score: 190.3 bits (482), Expect = 2.0e-44 Identity = 104/177 (58.76%), Postives = 129/177 (72.88%), Query Frame = 0
BLAST of Sed0019902 vs. NCBI nr
Match: XP_038874962.1 (putative B3 domain-containing protein At5g35780 [Benincasa hispida]) HSP 1 Score: 188.0 bits (476), Expect = 1.0e-43 Identity = 102/180 (56.67%), Postives = 123/180 (68.33%), Query Frame = 0
BLAST of Sed0019902 vs. NCBI nr
Match: XP_023540870.1 (putative B3 domain-containing protein At3g24850 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 186.0 bits (471), Expect = 3.8e-43 Identity = 95/176 (53.98%), Postives = 125/176 (71.02%), Query Frame = 0
BLAST of Sed0019902 vs. NCBI nr
Match: XP_022959448.1 (putative B3 domain-containing protein At3g24850 [Cucurbita moschata]) HSP 1 Score: 185.7 bits (470), Expect = 5.0e-43 Identity = 87/155 (56.13%), Postives = 117/155 (75.48%), Query Frame = 0
BLAST of Sed0019902 vs. ExPASy Swiss-Prot
Match: Q9SJ98 (B3 domain-containing protein At2g24670 OS=Arabidopsis thaliana OX=3702 GN=At2g24670 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.4e-08 Identity = 56/230 (24.35%), Postives = 110/230 (47.83%), Query Frame = 0
BLAST of Sed0019902 vs. ExPASy Swiss-Prot
Match: Q9FFX2 (B3 domain-containing protein At5g38490 OS=Arabidopsis thaliana OX=3702 GN=At5g38490 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 6.0e-07 Identity = 45/164 (27.44%), Postives = 76/164 (46.34%), Query Frame = 0
BLAST of Sed0019902 vs. ExPASy Swiss-Prot
Match: F4I8U3 (Putative B3 domain-containing protein At1g05615 OS=Arabidopsis thaliana OX=3702 GN=At1g05615 PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 5.6e-05 Identity = 23/84 (27.38%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of Sed0019902 vs. ExPASy TrEMBL
Match: A0A6J1H5Z0 (putative B3 domain-containing protein At3g24850 OS=Cucurbita moschata OX=3662 GN=LOC111460418 PE=4 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 2.4e-43 Identity = 87/155 (56.13%), Postives = 117/155 (75.48%), Query Frame = 0
BLAST of Sed0019902 vs. ExPASy TrEMBL
Match: A0A6J1JKC5 (B3 domain-containing protein At2g32645-like OS=Cucurbita maxima OX=3661 GN=LOC111487692 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 3.2e-43 Identity = 87/155 (56.13%), Postives = 117/155 (75.48%), Query Frame = 0
BLAST of Sed0019902 vs. ExPASy TrEMBL
Match: A0A6J1CX35 (putative B3 domain-containing protein At2g27410 OS=Momordica charantia OX=3673 GN=LOC111015593 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 2.7e-42 Identity = 103/187 (55.08%), Postives = 134/187 (71.66%), Query Frame = 0
BLAST of Sed0019902 vs. ExPASy TrEMBL
Match: A0A6J1FLW9 (B3 domain-containing protein At2g31420-like OS=Cucurbita moschata OX=3662 GN=LOC111445161 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 1.3e-41 Identity = 97/179 (54.19%), Postives = 122/179 (68.16%), Query Frame = 0
BLAST of Sed0019902 vs. ExPASy TrEMBL
Match: A0A6J1FG19 (B3 domain-containing protein At2g31420-like OS=Cucurbita moschata OX=3662 GN=LOC111445162 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 3.9e-41 Identity = 96/180 (53.33%), Postives = 122/180 (67.78%), Query Frame = 0
BLAST of Sed0019902 vs. TAIR 10
Match: AT2G24670.1 (Domain of unknown function (DUF313) ) HSP 1 Score: 61.6 bits (148), Expect = 1.0e-09 Identity = 56/230 (24.35%), Postives = 110/230 (47.83%), Query Frame = 0
BLAST of Sed0019902 vs. TAIR 10
Match: AT5G38490.1 (Domain of unknown function (DUF313) ) HSP 1 Score: 56.2 bits (134), Expect = 4.3e-08 Identity = 45/164 (27.44%), Postives = 76/164 (46.34%), Query Frame = 0
BLAST of Sed0019902 vs. TAIR 10
Match: AT1G05615.1 (Domain of unknown function (DUF313) ) HSP 1 Score: 49.7 bits (117), Expect = 4.0e-06 Identity = 23/84 (27.38%), Postives = 54/84 (64.29%), Query Frame = 0
BLAST of Sed0019902 vs. TAIR 10
Match: AT5G38500.1 (Domain of unknown function (DUF313) ) HSP 1 Score: 43.5 bits (101), Expect = 2.9e-04 Identity = 61/250 (24.40%), Postives = 108/250 (43.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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