Sed0019796 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAAGCTGGAAAACATCTCTGCTTCTACGGCACATCCGCAGTGTATGTATCTCTCTGGCAAAGAAAGCGCTTTCTTCTTCTTCTCTTCTTCAGAGTAAAGCAGACGCCATTAACAAGTACCAAATCAAGCTTCAGAGTGCTTTTGAAGCGAGCTCAAACCAGACAAAACCAAACCAGTTCTTCTCCAACTCCATTTCTCTATCATCATCTTCTTCTTCTTCTCTTTCTGCCTCTGCAAATCCCAATTCATTTCTTCGGCAATGGACAAAAGTACTCCTGTTCGGAAGCCTCACACCTCCACTGCAGATCTGCTCACTTGGCCTGAACTCCCGCCCGCCGATTCCCCTGCCCTTCCCTCTTCCGCTTCTCGTTCTGCTCCCAGGTCTCATCAGGTACTTTCTACTTTTTCCATCTCTTTTCCGCTTTCCTCTTTGCTTTCGTTTTCCTTTTCTTATTCTCTTTGTTTTTGCGTCTCTGTAGCCCTCCGATGGGATCAGTAAGGTCGTCTTTGGAGGCCAGGTTACGGACGAGGAGGTCGAGAGCTTGAACAAAAGGTGAGATCTATCCCTACTTTCTCTTCTTTCGAATTTTCATTATTCGATTCTGGTCATTTTGTTCTCTTTCTCATTCGGTTTTGTAGCTTCAGCCTTTGTTTTCCAGTGAGTTTTATGCCTCCGATCTGCTTCTTCAGTGTATATAAATTTGGTCAAATAATTCAAATTTCAATTCTCTTTCACTTTCTCCTCGCGTCTGTTTGCTTGAATGACCATTGGATCTCAAATTTGGTCAAATAATTAGCTCATTTTGGTTTGCCTTACATCAAATCTTCAAATCGCTGCTGTCATATAGTTTTGACTTTTAAATGATCTCCCACAATTGTTCAATTTGCCAACCCCAGGAAACCCTGTTCTGGATTTAAAATGAAGGAGATGACTGGAAGTGGCATTTTTGTTGCCAATGAAGGAGATGATGAACAAGAATCAGGAAATGCTAACCCTTCGCAGGGTAAAACGGGAATACGTATGTACCAGGTATCCATTGAAAATGATCATTTATTGCAGTTGTTTAGTGTAACTGTGAGAGCATTTGGGTTTGGTTGATATTTCTAACTGCTGGAGCTGGATCAACCGCAGCAAACCTTGGCTGGCATTAGTCATATTTCATTTGGTGAAGAAGGAAGTGTATCTCCTAAAAAGCCCACTACTGTACCTGAGGTTGCAAAGCAGCGCGAGCTGAGCGGGAACTTAGAGAGTGATGCCGATGCAAAGTTGAAGAAGCAGCTCTCTGATGCTAAATGCAAGGAGCTTAGTGGACATGACATATTCGCACCTCCTCCTGAGATGTTACCTCGACCAACAACTGCACGCACTTTGGATCTAAAAGGAAGCATCGACATTGGGGAGCCTGAAGATGTAAGTAGTACTGTAGCCAGATTTCTTTTCAGGATGGAGTTCTAGTTACTATAATTTCAAATACATCCATAAAGATGGCACACCCACATATGACACTCTCGTATGGGTTTTATTGACATCCAAAATGTTATAAGGTCAGGTGGTATGTTCCGTAAGAATAGTTTAAGTGTGTGTAAGTTTATCTAAACACTATCGGATATAAAAAAAGCTTAGAAATTACATAATTTAGTGTGAGTTTCTCGACCTTAGCCCGCTTTACGTGGTAATTATTTGGGCAGCATAGATAGAAGGGTGATGCATCAACCCATTCACCTTACTTGCTTGTTTGCATCATAGTTTCCTGATTGAGTCAGAAACTCTCAAGGATAGGAGGATTCCAATTGGTTAATATACGTGTAATAAATTAACCATTATGCAGTGGTCTAGAGGGCCTTGGAGAACTAAGATGTGAAGAGTTGAATCCATGGTGACCACCTACCTAAAAATTGATTTTCTACATTCTAAATGTTGTCGGGTTAGACGATATGTTCTGTAACAATAGTCGAGGTGAGGGCAAGCGGGCCCGAACAGTCACAGATATAAAGAAAAAGAAATATGTATACCTGCAACTAATTGATTGCTGATTATAAGGGTGGTGCACTAACTAGTTTATCTAATTCACACGTTCATTTGATCCATATTTTCTTGATGGGGTCAGAAGCTCACAATGATGGAATCCTAGGATTTCGGTTGGTTAGTGTCACGGTCATGCTTGTCCAGTGCGTGTTGCACATGGTTGCATGCCCGTTAGGACCCCTTTTTATCATGCTTTCATAGTATAGGATTTACTTCCATTGTCGTTGTCATTTCCTTATAGTTTTGTTAGCGTATGTCTCCTCGCCATTTTGACGTGCAAGCTAGCCACATAAAAAATGGTCCATTATGTACTATAGGGGGTATAACTTCTTAAAGCTTCCTTTCTACCAAGTTATATGAGCATGCAATATAGTTGATGTGGTCTTTATTGTAATGTTGTATAACCCTTCGAAAGACAAAAGCATTTCTTAAACCTTCTTTCTCCCTTTTTCGAAAACTTTTTCTCAAGTCCCGAGATAGAGGTTGCACCCAGTTGTGCCACCCGCTTTAGGTTTTTGTTTGGTTGACTTGCTCGCCGGGTTAGAGCAAGTGCCTCACGATCCCTTCGCAAAGGTCAACGAAGTCGGACCGTGACAGTTAGCATACTTTCAATCGTCACTAATTGCTCTATGGGGTTACTTTTTCTGAATAATTAAGCATGTCCTATCTGATAAGTTTCGGTAGCCGTTAGTTGTTGTTAGCTTTTATGCCTAGTTTTTTAGTTAACTTTTCTTCGAAGTTTTTCATAAGATCACCATCCTTCCTTCACACGGCGATCAGTAACATCAATAGTTTTCATTCATTCATCCTTTTATCTAATTATCTTTCTATTCTTCCAAAACAGAGAAATGTGATCCCAGGAGAAGAACCGTCAGTAAAGACAGCAAAGAAGATTTACGACAAGAAATTTTCGGAGTTATCAGGAAACAACATTTTCAAAGGCGATGTTCCTCCATCATCTGCAGAGAAACCGTTGAGCATTGCCAAACTGCGAGAGATGAATGGCAGTGACATATTTGCAGACGGGAAGGTAGAGGCCCGAGACTACTTAGGCGGAGTGCGCAAACCCCCGGGTGGAGAAAGCAGCATTGCCTTGGTTTAACTACCTAGATTCTAACCAAAACTCAAATACTTTTACTTGGTGGGGAGATTAAGAAAATTGTGATCTTGTTTGGGTAAAATTATGTTTTAGGTTTAACTATGGAGTCTGCTAATTGGGTTGTGCGCCAATATTGTGTTTTGTACTTGGTCGTGTGTCTGTCTAGTTCAGTTTTATGTTTGGTTGGTTGTCTTCTGCTTATTTACTTTCGATCACTTGGGATTTTCATTTATTTATCATTATATTGATTAATTGATTTAGTTATGATGCTGAAAGCTGAAACTGCTGCAATACTTAACAGTTAACATCATAGAGGCCATTGATTATATAC TTAAGCTGGAAAACATCTCTGCTTCTACGGCACATCCGCAGTGTATGTATCTCTCTGGCAAAGAAAGCGCTTTCTTCTTCTTCTCTTCTTCAGAGTAAAGCAGACGCCATTAACAAGTACCAAATCAAGCTTCAGAGTGCTTTTGAAGCGAGCTCAAACCAGACAAAACCAAACCAGTTCTTCTCCAACTCCATTTCTCTATCATCATCTTCTTCTTCTTCTCTTTCTGCCTCTGCAAATCCCAATTCATTTCTTCGGCAATGGACAAAAGTACTCCTGTTCGGAAGCCTCACACCTCCACTGCAGATCTGCTCACTTGGCCTGAACTCCCGCCCGCCGATTCCCCTGCCCTTCCCTCTTCCGCTTCTCGTTCTGCTCCCAGGTCTCATCAGCCCTCCGATGGGATCAGTAAGGTCGTCTTTGGAGGCCAGGTTACGGACGAGGAGGTCGAGAGCTTGAACAAAAGGAAACCCTGTTCTGGATTTAAAATGAAGGAGATGACTGGAAGTGGCATTTTTGTTGCCAATGAAGGAGATGATGAACAAGAATCAGGAAATGCTAACCCTTCGCAGGGTAAAACGGGAATACGTATGTACCAGCAAACCTTGGCTGGCATTAGTCATATTTCATTTGGTGAAGAAGGAAGTGTATCTCCTAAAAAGCCCACTACTGTACCTGAGGTTGCAAAGCAGCGCGAGCTGAGCGGGAACTTAGAGAGTGATGCCGATGCAAAGTTGAAGAAGCAGCTCTCTGATGCTAAATGCAAGGAGCTTAGTGGACATGACATATTCGCACCTCCTCCTGAGATGTTACCTCGACCAACAACTGCACGCACTTTGGATCTAAAAGGAAGCATCGACATTGGGGAGCCTGAAGATAGAAATGTGATCCCAGGAGAAGAACCGTCAGTAAAGACAGCAAAGAAGATTTACGACAAGAAATTTTCGGAGTTATCAGGAAACAACATTTTCAAAGGCGATGTTCCTCCATCATCTGCAGAGAAACCGTTGAGCATTGCCAAACTGCGAGAGATGAATGGCAGTGACATATTTGCAGACGGGAAGGTAGAGGCCCGAGACTACTTAGGCGGAGTGCGCAAACCCCCGGGTGGAGAAAGCAGCATTGCCTTGGTTTAACTACCTAGATTCTAACCAAAACTCAAATACTTTTACTTGGTGGGGAGATTAAGAAAATTGTGATCTTGTTTGGGTAAAATTATGTTTTAGGTTTAACTATGGAGTCTGCTAATTGGGTTGTGCGCCAATATTGTGTTTTGTACTTGGTCGTGTGTCTGTCTAGTTCAGTTTTATGTTTGGTTGGTTGTCTTCTGCTTATTTACTTTCGATCACTTGGGATTTTCATTTATTTATCATTATATTGATTAATTGATTTAGTTATGATGCTGAAAGCTGAAACTGCTGCAATACTTAACAGTTAACATCATAGAGGCCATTGATTATATAC ATGGACAAAAGTACTCCTGTTCGGAAGCCTCACACCTCCACTGCAGATCTGCTCACTTGGCCTGAACTCCCGCCCGCCGATTCCCCTGCCCTTCCCTCTTCCGCTTCTCGTTCTGCTCCCAGGTCTCATCAGCCCTCCGATGGGATCAGTAAGGTCGTCTTTGGAGGCCAGGTTACGGACGAGGAGGTCGAGAGCTTGAACAAAAGGAAACCCTGTTCTGGATTTAAAATGAAGGAGATGACTGGAAGTGGCATTTTTGTTGCCAATGAAGGAGATGATGAACAAGAATCAGGAAATGCTAACCCTTCGCAGGGTAAAACGGGAATACGTATGTACCAGCAAACCTTGGCTGGCATTAGTCATATTTCATTTGGTGAAGAAGGAAGTGTATCTCCTAAAAAGCCCACTACTGTACCTGAGGTTGCAAAGCAGCGCGAGCTGAGCGGGAACTTAGAGAGTGATGCCGATGCAAAGTTGAAGAAGCAGCTCTCTGATGCTAAATGCAAGGAGCTTAGTGGACATGACATATTCGCACCTCCTCCTGAGATGTTACCTCGACCAACAACTGCACGCACTTTGGATCTAAAAGGAAGCATCGACATTGGGGAGCCTGAAGATAGAAATGTGATCCCAGGAGAAGAACCGTCAGTAAAGACAGCAAAGAAGATTTACGACAAGAAATTTTCGGAGTTATCAGGAAACAACATTTTCAAAGGCGATGTTCCTCCATCATCTGCAGAGAAACCGTTGAGCATTGCCAAACTGCGAGAGATGAATGGCAGTGACATATTTGCAGACGGGAAGGTAGAGGCCCGAGACTACTTAGGCGGAGTGCGCAAACCCCCGGGTGGAGAAAGCAGCATTGCCTTGGTTTAA MDKSTPVRKPHTSTADLLTWPELPPADSPALPSSASRSAPRSHQPSDGISKVVFGGQVTDEEVESLNKRKPCSGFKMKEMTGSGIFVANEGDDEQESGNANPSQGKTGIRMYQQTLAGISHISFGEEGSVSPKKPTTVPEVAKQRELSGNLESDADAKLKKQLSDAKCKELSGHDIFAPPPEMLPRPTTARTLDLKGSIDIGEPEDRNVIPGEEPSVKTAKKIYDKKFSELSGNNIFKGDVPPSSAEKPLSIAKLREMNGSDIFADGKVEARDYLGGVRKPPGGESSIALV Homology
BLAST of Sed0019796 vs. NCBI nr
Match: XP_038884071.1 (uncharacterized protein LOC120075008 [Benincasa hispida]) HSP 1 Score: 548.1 bits (1411), Expect = 4.5e-152 Identity = 272/291 (93.47%), Postives = 287/291 (98.63%), Query Frame = 0
BLAST of Sed0019796 vs. NCBI nr
Match: XP_004142997.1 (uncharacterized protein LOC101215119 [Cucumis sativus] >KGN62250.1 hypothetical protein Csa_018791 [Cucumis sativus]) HSP 1 Score: 545.4 bits (1404), Expect = 2.9e-151 Identity = 271/291 (93.13%), Postives = 284/291 (97.59%), Query Frame = 0
BLAST of Sed0019796 vs. NCBI nr
Match: XP_008445341.1 (PREDICTED: uncharacterized protein LOC103488402 [Cucumis melo] >KAA0064833.1 uncharacterized protein E6C27_scaffold82G001450 [Cucumis melo var. makuwa]) HSP 1 Score: 543.1 bits (1398), Expect = 1.4e-150 Identity = 270/291 (92.78%), Postives = 284/291 (97.59%), Query Frame = 0
BLAST of Sed0019796 vs. NCBI nr
Match: XP_023547326.1 (uncharacterized protein LOC111806182 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 539.3 bits (1388), Expect = 2.1e-149 Identity = 270/291 (92.78%), Postives = 282/291 (96.91%), Query Frame = 0
BLAST of Sed0019796 vs. NCBI nr
Match: KAG6598681.1 (DNA oxidative demethylase ALKBH2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 537.7 bits (1384), Expect = 6.1e-149 Identity = 269/291 (92.44%), Postives = 282/291 (96.91%), Query Frame = 0
BLAST of Sed0019796 vs. ExPASy Swiss-Prot
Match: Q9SIE0 (DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana OX=3702 GN=ALKBH2 PE=2 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 1.7e-05 Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of Sed0019796 vs. ExPASy TrEMBL
Match: A0A0A0LK08 (DUF4057 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G345910 PE=4 SV=1) HSP 1 Score: 545.4 bits (1404), Expect = 1.4e-151 Identity = 271/291 (93.13%), Postives = 284/291 (97.59%), Query Frame = 0
BLAST of Sed0019796 vs. ExPASy TrEMBL
Match: A0A5A7V9J6 (DUF4057 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001450 PE=4 SV=1) HSP 1 Score: 543.1 bits (1398), Expect = 7.0e-151 Identity = 270/291 (92.78%), Postives = 284/291 (97.59%), Query Frame = 0
BLAST of Sed0019796 vs. ExPASy TrEMBL
Match: A0A1S3BD79 (uncharacterized protein LOC103488402 OS=Cucumis melo OX=3656 GN=LOC103488402 PE=4 SV=1) HSP 1 Score: 543.1 bits (1398), Expect = 7.0e-151 Identity = 270/291 (92.78%), Postives = 284/291 (97.59%), Query Frame = 0
BLAST of Sed0019796 vs. ExPASy TrEMBL
Match: A0A6J1KDA0 (uncharacterized protein LOC111492197 OS=Cucurbita maxima OX=3661 GN=LOC111492197 PE=4 SV=1) HSP 1 Score: 535.8 bits (1379), Expect = 1.1e-148 Identity = 269/291 (92.44%), Postives = 281/291 (96.56%), Query Frame = 0
BLAST of Sed0019796 vs. ExPASy TrEMBL
Match: A0A6J1HBT8 (uncharacterized protein LOC111462582 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462582 PE=4 SV=1) HSP 1 Score: 535.0 bits (1377), Expect = 1.9e-148 Identity = 268/291 (92.10%), Postives = 281/291 (96.56%), Query Frame = 0
BLAST of Sed0019796 vs. TAIR 10
Match: AT1G78150.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits to 146 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 370.2 bits (949), Expect = 1.6e-102 Identity = 199/291 (68.38%), Postives = 230/291 (79.04%), Query Frame = 0
BLAST of Sed0019796 vs. TAIR 10
Match: AT1G78150.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 370.2 bits (949), Expect = 1.6e-102 Identity = 199/291 (68.38%), Postives = 230/291 (79.04%), Query Frame = 0
BLAST of Sed0019796 vs. TAIR 10
Match: AT1G78150.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G35780.1). ) HSP 1 Score: 354.8 bits (909), Expect = 6.8e-98 Identity = 199/320 (62.19%), Postives = 230/320 (71.88%), Query Frame = 0
BLAST of Sed0019796 vs. TAIR 10
Match: AT1G35780.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78150.2); Has 145 Blast hits to 144 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 354.0 bits (907), Expect = 1.2e-97 Identity = 199/296 (67.23%), Postives = 231/296 (78.04%), Query Frame = 0
BLAST of Sed0019796 vs. TAIR 10
Match: AT4G39860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits to 146 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 340.9 bits (873), Expect = 1.0e-93 Identity = 180/307 (58.63%), Postives = 222/307 (72.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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