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Sed0019699 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTTATTCATACAAACACCCATACAGTTGGTTTGTGTTTGGGCCCATGGTTTGGCAAATTACATGAAAGCAAAATCAGAATAAACCAAATCCTTATCCCTTCACAACCCACATCCACAAAATCCCCTCCTTCCATTTCTCCCCCAAACACACACACACACAAAAAAACAATGGCAACTCTTCATTTCGCCCCATCCGCTTTTTCTCTACCAAAGCAAACCCATCAACCCACCAAGCTCCGACCCACAATCCGGCTACCCTCACGGCGGCGCATGGTGGTCCGGTCGTACAAAGTGGTGGTGGAGCACGGCGGCAAAACCACCGAGCTGGAAGTGGATCCAGACGAGAGCATTTTGAGCACCGCATTGGACCATGGGCTGGACATTCCGCACGACTGCAAGCTGGGTGTGTGCATGACCTGCCCGGCTCGGCTGATCAGCGGCGCCGTGGACCAGAGCGAGGGCATGCTCAGCGACGACGTCGTCGACCGCGGCTACTCGCTTCTCTGCGTCGCTTATCCCCGCTCCGATTGCCACATCAAAACCATCCCCGAGGAGGAATTGTTGGCTCTTCAATTAGCCACTGCTAACGACTGATTCTGATCCCTTTTATTCTTTTTCTCAATTGGGTTTTTGCCTCAGGTTTGAATGGTTTTGTAGGTTTAATTCTGGTTTAGTTTAATTATATTGAAATCAATGGCTATGGGGCTCTGTTTAGTTTTCATGTTGTTTGATTGTTTGTGTTTATTGATAATTGCTAGTTGATATAGCTGTGAATTCAATCCACATTTAAGTAGGAATCAATTTTCAATTTGTTTTCTTGATACTCTAATATTGTAGCG ATTTATTCATACAAACACCCATACAGTTGGTTTGTGTTTGGGCCCATGGTTTGGCAAATTACATGAAAGCAAAATCAGAATAAACCAAATCCTTATCCCTTCACAACCCACATCCACAAAATCCCCTCCTTCCATTTCTCCCCCAAACACACACACACACAAAAAAACAATGGCAACTCTTCATTTCGCCCCATCCGCTTTTTCTCTACCAAAGCAAACCCATCAACCCACCAAGCTCCGACCCACAATCCGGCTACCCTCACGGCGGCGCATGGTGGTCCGGTCGTACAAAGTGGTGGTGGAGCACGGCGGCAAAACCACCGAGCTGGAAGTGGATCCAGACGAGAGCATTTTGAGCACCGCATTGGACCATGGGCTGGACATTCCGCACGACTGCAAGCTGGGTGTGTGCATGACCTGCCCGGCTCGGCTGATCAGCGGCGCCGTGGACCAGAGCGAGGGCATGCTCAGCGACGACGTCGTCGACCGCGGCTACTCGCTTCTCTGCGTCGCTTATCCCCGCTCCGATTGCCACATCAAAACCATCCCCGAGGAGGAATTGTTGGCTCTTCAATTAGCCACTGCTAACGACTGATTCTGATCCCTTTTATTCTTTTTCTCAATTGGGTTTTTGCCTCAGGTTTGAATGGTTTTGTAGGTTTAATTCTGGTTTAGTTTAATTATATTGAAATCAATGGCTATGGGGCTCTGTTTAGTTTTCATGTTGTTTGATTGTTTGTGTTTATTGATAATTGCTAGTTGATATAGCTGTGAATTCAATCCACATTTAAGTAGGAATCAATTTTCAATTTGTTTTCTTGATACTCTAATATTGTAGCG ATGGCAACTCTTCATTTCGCCCCATCCGCTTTTTCTCTACCAAAGCAAACCCATCAACCCACCAAGCTCCGACCCACAATCCGGCTACCCTCACGGCGGCGCATGGTGGTCCGGTCGTACAAAGTGGTGGTGGAGCACGGCGGCAAAACCACCGAGCTGGAAGTGGATCCAGACGAGAGCATTTTGAGCACCGCATTGGACCATGGGCTGGACATTCCGCACGACTGCAAGCTGGGTGTGTGCATGACCTGCCCGGCTCGGCTGATCAGCGGCGCCGTGGACCAGAGCGAGGGCATGCTCAGCGACGACGTCGTCGACCGCGGCTACTCGCTTCTCTGCGTCGCTTATCCCCGCTCCGATTGCCACATCAAAACCATCCCCGAGGAGGAATTGTTGGCTCTTCAATTAGCCACTGCTAACGACTGA MATLHFAPSAFSLPKQTHQPTKLRPTIRLPSRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQSEGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND Homology
BLAST of Sed0019699 vs. NCBI nr
Match: XP_038880925.1 (ferredoxin C 1, chloroplastic [Benincasa hispida]) HSP 1 Score: 241.1 bits (614), Expect = 5.7e-60 Identity = 121/143 (84.62%), Postives = 133/143 (93.01%), Query Frame = 0
BLAST of Sed0019699 vs. NCBI nr
Match: XP_004134137.1 (ferredoxin C 1, chloroplastic [Cucumis sativus] >KGN56985.1 hypothetical protein Csa_010907 [Cucumis sativus]) HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59 Identity = 122/145 (84.14%), Postives = 132/145 (91.03%), Query Frame = 0
BLAST of Sed0019699 vs. NCBI nr
Match: XP_008438679.1 (PREDICTED: ferredoxin-1 [Cucumis melo]) HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59 Identity = 121/145 (83.45%), Postives = 132/145 (91.03%), Query Frame = 0
BLAST of Sed0019699 vs. NCBI nr
Match: KAA0049364.1 (ferredoxin-1 [Cucumis melo var. makuwa] >TYK17194.1 ferredoxin-1 [Cucumis melo var. makuwa]) HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59 Identity = 121/145 (83.45%), Postives = 132/145 (91.03%), Query Frame = 0
BLAST of Sed0019699 vs. NCBI nr
Match: XP_022956084.1 (uncharacterized protein LOC111457884 [Cucurbita moschata] >KAG7018707.1 petF2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 237.7 bits (605), Expect = 6.3e-59 Identity = 122/148 (82.43%), Postives = 132/148 (89.19%), Query Frame = 0
BLAST of Sed0019699 vs. ExPASy Swiss-Prot
Match: O23344 (Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC1 PE=1 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 2.9e-46 Identity = 84/108 (77.78%), Postives = 98/108 (90.74%), Query Frame = 0
BLAST of Sed0019699 vs. ExPASy Swiss-Prot
Match: P0A3D0 (Ferredoxin-1 OS=Synechococcus elongatus OX=32046 GN=petF1 PE=3 SV=2) HSP 1 Score: 97.1 bits (240), Expect = 1.7e-19 Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of Sed0019699 vs. ExPASy Swiss-Prot
Match: P0A3C9 (Ferredoxin-1 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=petF1 PE=1 SV=2) HSP 1 Score: 97.1 bits (240), Expect = 1.7e-19 Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of Sed0019699 vs. ExPASy Swiss-Prot
Match: P0A3D1 (Ferredoxin-1 OS=Thermosynechococcus vulcanus OX=32053 GN=petF1 PE=3 SV=2) HSP 1 Score: 97.1 bits (240), Expect = 1.7e-19 Identity = 47/95 (49.47%), Postives = 61/95 (64.21%), Query Frame = 0
BLAST of Sed0019699 vs. ExPASy Swiss-Prot
Match: P00252 (Ferredoxin-1 OS=Desmonostoc muscorum OX=1179 PE=1 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 2.3e-19 Identity = 46/94 (48.94%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of Sed0019699 vs. ExPASy TrEMBL
Match: A0A5D3D1U0 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00400 PE=3 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 8.0e-60 Identity = 121/145 (83.45%), Postives = 132/145 (91.03%), Query Frame = 0
BLAST of Sed0019699 vs. ExPASy TrEMBL
Match: A0A0A0L4U6 (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G146700 PE=3 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 8.0e-60 Identity = 122/145 (84.14%), Postives = 132/145 (91.03%), Query Frame = 0
BLAST of Sed0019699 vs. ExPASy TrEMBL
Match: A0A1S3AX36 (Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103483712 PE=3 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 8.0e-60 Identity = 121/145 (83.45%), Postives = 132/145 (91.03%), Query Frame = 0
BLAST of Sed0019699 vs. ExPASy TrEMBL
Match: A0A6J1GY17 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111457884 PE=3 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 3.1e-59 Identity = 122/148 (82.43%), Postives = 132/148 (89.19%), Query Frame = 0
BLAST of Sed0019699 vs. ExPASy TrEMBL
Match: A0A6J1IWL8 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111479154 PE=3 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 1.2e-58 Identity = 119/148 (80.41%), Postives = 130/148 (87.84%), Query Frame = 0
BLAST of Sed0019699 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein ) HSP 1 Score: 186.0 bits (471), Expect = 2.0e-47 Identity = 84/108 (77.78%), Postives = 98/108 (90.74%), Query Frame = 0
BLAST of Sed0019699 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 ) HSP 1 Score: 90.5 bits (223), Expect = 1.2e-18 Identity = 44/94 (46.81%), Postives = 61/94 (64.89%), Query Frame = 0
BLAST of Sed0019699 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 ) HSP 1 Score: 78.6 bits (192), Expect = 4.6e-15 Identity = 38/101 (37.62%), Postives = 59/101 (58.42%), Query Frame = 0
BLAST of Sed0019699 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein ) HSP 1 Score: 78.2 bits (191), Expect = 6.0e-15 Identity = 37/101 (36.63%), Postives = 59/101 (58.42%), Query Frame = 0
BLAST of Sed0019699 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 ) HSP 1 Score: 75.1 bits (183), Expect = 5.0e-14 Identity = 34/86 (39.53%), Postives = 54/86 (62.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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