Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAATATCACGAGAGAATTGCATTGGCAAAAGATGATCTTCAAGCTACTATTCGTTTGAACAATGAGGTTCAAGAACCGAGAAGAAGGTTGGAGCAAATCCTTAATGAGGAGGAAATGTATTGGAGACAACGATCAAGGGTGGATTGGCTTCAATGAGGAGACCGTAATTTTAAATGGTTTCACCAATGTGCATCGCAAAGAAGGCACTCTAATATGATTACTCATTTACAGTCTCAAGAGGGAACCTGGATTGAGGATGCTTAAGGAATTGAGAGGGAGATTTGTAGTTATTTCCAAAAACTGTTCACTACAAATGGATTCCAACATCATCAGTTTGGTTCCGAATTTTTTGGAAAGGTACACCAATCTTATCCTGCTGATTTACTTTCTTTAATGAGCTCCCCCTTTTCCGAAGAGGAAGTTATTCAAGCATTGAAACAAATGAGCTCGTCTAAGGCTCTTGGCGTGGATGGTTTTACAGTTTCTTTTTATAAAAATTTTTGGGGAAATATGGGGAGGGAGGTTTTGGATTTTTGTATGCAAGTTTTGAATGAAGGAAAGTCGTTAGAGGAGGTTAATGTTACTGCTATTTCTTTGATTCCAAAATCACCTTGCTCGAAGGGAGTTAATGGCTTTCGACCGATTAGTTTATGCAACGTTTGTATAAACTTATTTTGAAAACCATAGCTAACCGTCTTAAGGAAATTCTTAAAGTAATAATCTCCCCTACACAAAGTGCATTCGTACCAGGCAGGAGTATCACTGATAATGCTATTCTGGGTTTTGAGTGCCTTCATTATGTCAAACGAAGAACTAGAGGTAAAAATGGAGTTGTTGCTTTGAAAATTGATATGAGCAAGGCATATGATAGGGTAGAGTGGCATTTTCTTGAGAATTTCATTCATGCGCTTGGGTTCCACTACACTTTTGTGAACTTGATTATAAGGTGTGTCTCGACTGTGAGTTTCACCTTTAATATCAATGGGGAAAGGGTGGGATCTGTAAAGCCCACAAGAGGCTTGAGACAAGGAGATCCTCTTTCCCCTTATTTATTCTTGTTATGTACCGAAAGCCTTTCTAGACTATTAGCTCAAAAAGAGATGGATCATAGTATTACACCATTGAAGGTGGCAAAAAGGGCCCTACTTATCTCCCATCTTTTTTTTTTTTTTTTTTGCAGATGATTGCTTATTATTTTGTCAGGCCAATGTTAAGGAAGCTCAAATTGTGGATGATATTTTATGGAGATACACGGTTATAACAAGCCAGGAAGTGAATTTTGCTAAGTCTGCTATTTGTTTTAGTCCAAATACTATACTTCTTATACAAGATCAAATTGTTGACCTTTTGAAGGTGGTTCGTGTACAAGTTCATGGAAAGTACCTAGACGTTCCGGTATCTCTTGAACACTCTAAGTCGACTTCCTTTAAATATATTAAGGATCGATTATGAGGTTATATTATGAAGTAGAGACATAAGTTTTTTTTTCCGAAGGTGGCAAAGAAGTGCTAATTAAAGTTGTTTTACAAGCTTTACCGACGTATTCTATGAATTATTTTCGGCTACCAAAAGCCATTATTCTGGAGTGTCATAGAATTATGTAAAGGTTTTGGTGGCGTGGTCCCGAGTTACAACATAAAATCCATTGGGTGTCTTGGAAGAAGGCATGCACTTCAAAGTTTAAAAAGGGTCTTGGTTTTCTTGATTTGGAGTTGTTTAACCAAGCACTTCTAGCCAAACAAGGGTGGAGGTTAATTAATAAACCTAAATCCTTAATGGCTAAAGTGCTAAAGGCTAAATATTATCATTCTAACTCATTTCTTACTGCTAATTGCCCAAGTTTTGCCTCATATATTTGGAGGAGTATTTGTTGGGGGAAAAGACTTTTAACAGAAGGATTGAGATGGAGGATAGGGGGAGGAAAAAATGTGAATGTCTTAAATGATTAGTGGCTGAATCGATCAGGGAATATGTGCATTCTTAATTCAGTTGGCATAAATCCAGATCTTAGGGTGTGTGATATTTTGAATGATGATGGGCAATGGAATGTGCATATGGTGAAATACCTATTTTGTGATGAGGATGCTAAAGAAATTCTCAAACTACCAAAACATACCGTAACTCAACTAGATGAAGATTCTTTAATTTGGCAGTTTGAAAAAAAATGGGTTTTATACCGTGAAATCTGGTTATGTTCTGGCTTATAAGATGCGGGACTTTCCTACGTCTTCAAATGATGGAAACCAAGTTAAATGGTGGAAGAGACTTTGGAATTGTAATGTTCCTAGAATTTTTTTTTTTTGTTTTGGCGACTTTATAATAATCTTGTCCCAACTTATGCTAACCTGCATAAAAGGGGGATTGATTTGAATGAGAGTTGCCCTAGATGTGGAAAATGGCCTGAATCAACATACCATACTATGTGGGAGTGTAAAGGGGCAAAGAAGCTATGGGTGACAACTCCTTGGCAGGAACTTAAGTGTCCTAAGGGAATCACTACTTTTGCTGATTTGGTTCATTGGGTTTTTGATTCTGCACAACAAAAACATTTTGAAGAGTTTCTAATCATGTGTTGGTGTGTGTGGCGATATCGAAATAAGGAGGTGAGGGGTGGAGGAAGTGATTATGATGGTTTGCCTATGGATTGGAATTTATGTCAATCCTGTATTAATGAGTTTAGGGAGACAAATGCAAAGGTTTTCTCTACTCATCGTGAGTATACACAACAGAACAGTTTCAACAAGAAAGAGTGGAATCCCCTTAATTATCCTAATTTCAAAATGAATACTGATGCTGCTATTCGAGAGGAAATGGGAAGTAGTGGAATGGGCATGGTGATTCGAAATGAAAAAGGTGAAGCTATGATTTCCATGGCCAAACCTGTTTATGGAGTTACAGATGTGCAACTAGTTGAGGTATGGCAGTTCTAGCTGGTTTATTGATGGCAGAGGCGATGAGCTTTCAGCGTGTTGAGGTCGAGTTGGATTCGACTTCAATTGTGAATCTTCTACAACGAACAATGAAATGCATCACTGAATTGGGCAAAATCGTGAAGGAAATTTGGAAAATTTCAAGCCGCCTTACTTTTGTGTCGTTCTATTGGTGTGGTCGAAAGATGAATAAATTAGCACATGCTCTAGCAAAATTGGCAATTCCCATGGATGAAGAAACAATTTGGGTGGAGGAAGTCCTGATGACCGTGGAAGAGCTTTACAATTGA
mRNA sequence
ATGGGGAAATATCACGAGAGAATTGCATTGGCAAAAGATGATCTTCAAGCTACTATTCGTTTGAACAATGAGGTTCAAGAACCGAGAAGAAGTCTCAAGAGGGAACCTGGATTGAGGATGCTTAAGGAATTGAGAGGGAGATTTGTAGTTATTTCCAAAAACTGTTCACTACAAATGGATTCCAACATCATCAGTTTGGTTCCGAATTTTTTGGAAAGGGGGATTGATTTGAATGAGAGTTGCCCTAGATGTGGAAAATGGCCTGAATCAACATACCATACTATGTGGGAGTGTAAAGGGGCAAAGAAGCTATGGGTGACAACTCCTTGGCAGGAACTTAAGTGTCCTAAGGGAATCACTACTTTTGCTGATTTGGTTCATTGGGTTTTTGATTCTGCACAACAAAAACATTTTGAAGAGTTTCTAATCATGTGTTGGTGTGTGTGGCGATATCGAAATAAGGAGGTGAGGGGTGGAGGAAGTGATTATGATGGTTTGCCTATGGATTGGAATTTATGTCAATCCTGTATTAATGAGTTTAGGGAGACAAATGCAAAGGTTTTCTCTACTCATCGTGAGTATACACAACAGAACAGTTTCAACAAGAAAGAGTGGAATCCCCTTAATTATCCTAATTTCAAAATGAATACTGATGCTGCTATTCGAGAGGAAATGGGAAGTAGTGGAATGGGCATGGTGATTCGAAATGAAAAAGAGGCGATGAGCTTTCAGCGTGTTGAGGTCGAGTTGGATTCGACTTCAATTGTGAATCTTCTACAACGAACAATGAAATGCATCACTGAATTGGGCAAAATCGTGAAGGAAATTTGGAAAATTTCAAGCCGCCTTACTTTTGTGTCGTTCTATTGGTGTGGTCGAAAGATGAATAAATTAGCACATGCTCTAGCAAAATTGGCAATTCCCATGGATGAAGAAACAATTTGGGTGGAGGAAGTCCTGATGACCGTGGAAGAGCTTTACAATTGA
Coding sequence (CDS)
ATGGGGAAATATCACGAGAGAATTGCATTGGCAAAAGATGATCTTCAAGCTACTATTCGTTTGAACAATGAGGTTCAAGAACCGAGAAGAAGTCTCAAGAGGGAACCTGGATTGAGGATGCTTAAGGAATTGAGAGGGAGATTTGTAGTTATTTCCAAAAACTGTTCACTACAAATGGATTCCAACATCATCAGTTTGGTTCCGAATTTTTTGGAAAGGGGGATTGATTTGAATGAGAGTTGCCCTAGATGTGGAAAATGGCCTGAATCAACATACCATACTATGTGGGAGTGTAAAGGGGCAAAGAAGCTATGGGTGACAACTCCTTGGCAGGAACTTAAGTGTCCTAAGGGAATCACTACTTTTGCTGATTTGGTTCATTGGGTTTTTGATTCTGCACAACAAAAACATTTTGAAGAGTTTCTAATCATGTGTTGGTGTGTGTGGCGATATCGAAATAAGGAGGTGAGGGGTGGAGGAAGTGATTATGATGGTTTGCCTATGGATTGGAATTTATGTCAATCCTGTATTAATGAGTTTAGGGAGACAAATGCAAAGGTTTTCTCTACTCATCGTGAGTATACACAACAGAACAGTTTCAACAAGAAAGAGTGGAATCCCCTTAATTATCCTAATTTCAAAATGAATACTGATGCTGCTATTCGAGAGGAAATGGGAAGTAGTGGAATGGGCATGGTGATTCGAAATGAAAAAGAGGCGATGAGCTTTCAGCGTGTTGAGGTCGAGTTGGATTCGACTTCAATTGTGAATCTTCTACAACGAACAATGAAATGCATCACTGAATTGGGCAAAATCGTGAAGGAAATTTGGAAAATTTCAAGCCGCCTTACTTTTGTGTCGTTCTATTGGTGTGGTCGAAAGATGAATAAATTAGCACATGCTCTAGCAAAATTGGCAATTCCCATGGATGAAGAAACAATTTGGGTGGAGGAAGTCCTGATGACCGTGGAAGAGCTTTACAATTGA
Protein sequence
MGKYHERIALAKDDLQATIRLNNEVQEPRRSLKREPGLRMLKELRGRFVVISKNCSLQMDSNIISLVPNFLERGIDLNESCPRCGKWPESTYHTMWECKGAKKLWVTTPWQELKCPKGITTFADLVHWVFDSAQQKHFEEFLIMCWCVWRYRNKEVRGGGSDYDGLPMDWNLCQSCINEFRETNAKVFSTHREYTQQNSFNKKEWNPLNYPNFKMNTDAAIREEMGSSGMGMVIRNEKEAMSFQRVEVELDSTSIVNLLQRTMKCITELGKIVKEIWKISSRLTFVSFYWCGRKMNKLAHALAKLAIPMDEETIWVEEVLMTVEELYN
Homology
BLAST of Sed0019631 vs. NCBI nr
Match:
XP_023904177.1 (uncharacterized protein LOC112015942 [Quercus suber])
HSP 1 Score: 120.9 bits (302), Expect = 2.0e-23
Identity = 80/286 (27.97%), Postives = 126/286 (44.06%), Query Frame = 0
Query: 69 NFLERGIDLNESCPRCGKWPESTYHTMWECKGAKKLWVTTPWQELKCPKGITTFADLVHW 128
N +R I CP C + PE+ H +WEC A+ +W + + KCP G L +
Sbjct: 221 NLAKRKIIAETFCPICLQSPENEMHVIWECPVAQDVWAGSRIKLQKCPLGQPDMVQLFLY 280
Query: 129 VFDSAQQKHFEEFLIMCWCVWRYRNKEVRGGGSDYDG----LPMDWNLCQSCINEFRETN 188
+ + + FL+ W +W RN + GG G ++W + EF +
Sbjct: 281 LLHRLEPEDMALFLVQAWMLWSQRNSVLHGGKLKEPGWLNKRDVEW------LEEFAQVQ 340
Query: 189 AKVFSTHREYTQQNSFNKKEWNPLNYPNFKMNTDAAIREEMGSSGMGMVIRNE------- 248
++ + Q + W P +P FKMN DAAI + G SG G VIRNE
Sbjct: 341 DQL-----DVLQPRATVGNVWRPPAHPFFKMNFDAAIFNDSGRSGFGAVIRNELGEVMAA 400
Query: 249 -------------------KEAM------SFQRVEVELDSTSIVNLLQRTMKCITELGKI 308
++AM F + +E DS +++ L + ++ +G +
Sbjct: 401 LSAIGPSVSSSDEAETLACRKAMEFAVDAGFNELIIEGDSINVIKALSSSSPDLSVVGNV 460
Query: 309 VKEIWKISSRLTFVSFYWCGRKMNKLAHALAKLAIPMDEETIWVEE 319
V +I + S L VSF W R N++AHALAK A ++E+ W+E+
Sbjct: 461 VADIKCLISGLRRVSFSWVNRDCNRVAHALAKFANSLEEDLYWMED 495
BLAST of Sed0019631 vs. NCBI nr
Match:
XP_023915286.1 (uncharacterized protein LOC112026812 [Quercus suber])
HSP 1 Score: 108.6 bits (270), Expect = 1.0e-19
Identity = 76/292 (26.03%), Postives = 134/292 (45.89%), Query Frame = 0
Query: 62 NIISLVPNFLERGIDLNESCPRCGKWPESTYHTMWECKGAKKLWVTTPWQELKCPKGITT 121
NI+ + +R I NE CP C P++ H +WECK A+ +W + L+ KG+T
Sbjct: 767 NILPTLEKLRQRRIVENELCPICKLVPKTILHALWECKAAQDVWAGCSQRVLQ--KGLTV 826
Query: 122 FADLVHWVFDSAQQKH---FEEFLIMCWCVWRYRNKEVRGGGSDYDGLPMDWNLCQSCIN 181
+ ++ D + FE FL++CW +W RN+ V GG G + C +
Sbjct: 827 QSSMLQLTEDMWHKMPLDVFEFFLVLCWLLWHRRNRVVFGGLLQEPGALIGRARC--LLA 886
Query: 182 EFRETNAKVFSTHREYTQQNSFNKKEWNPLNYPNFKMNTDAAIREEMGSSGMGMVIRN-- 241
EF E TH + + +++ W P +K+N D A+ ++ +SG+G++IRN
Sbjct: 887 EFVEAR-----THLAIPESLAHSQR-WQPPVGSRYKLNFDVAVFSDISASGVGVIIRNGD 946
Query: 242 ------------------EKEAMSFQR------------VEVELDSTSIVNLLQRTMKCI 301
E E ++ +R + VE D+ +++ +
Sbjct: 947 GQVMAALSARGPAVTDGDEAEVLACRRGLEFAMEAGFGDLIVEGDNLNVMQAVASNRSDW 1006
Query: 302 TELGKIVKEIWKISSRLTFVSFYWCGRKMNKLAHALAKLAIPMDEETIWVEE 319
+ LG +V ++ ++ RL V F R N +AH+LA+ A + E+ +W+E+
Sbjct: 1007 SRLGNLVDDVRHLAGRLRLVDFQCIRRSANGVAHSLARFARNISEDCVWLED 1048
BLAST of Sed0019631 vs. NCBI nr
Match:
XP_024190234.1 (uncharacterized protein LOC112194221 [Rosa chinensis])
HSP 1 Score: 108.2 bits (269), Expect = 1.3e-19
Identity = 76/288 (26.39%), Postives = 132/288 (45.83%), Query Frame = 0
Query: 69 NFLERGIDLNESCPRCGKWPESTYHTMWECKGAKKLW-------VTTPWQELKCPKGITT 128
N R + + C RCG+ E+T H MW C +KK+W V W+E +
Sbjct: 928 NLFRRHVGNSSLCCRCGREEETTIHCMWSCPWSKKVWKFSFLNGVYKQWRE-------PS 987
Query: 129 FADLVHWVFDSAQQKHFEEFLIMCWCVWRYRNKEVRGGGSDYDGLPMDWNLCQSCINEFR 188
F DL V ++ ++ E F ++CW +W+ RN+ + G + + W+ +N F+
Sbjct: 988 FIDLFAHVVKTSSKEEVELFSVICWLLWKSRNR-FKHEGVVEESKHIVWS-ANEWLNNFQ 1047
Query: 189 ETNAKVFSTHREYTQQNSFNKKEWNPLNYPNFKMNTDAAIREEMGSSGMGMVIRNEK--- 248
+ + ++ TQ+ K +W P P K+NTDAAI + + +GMV+R+ +
Sbjct: 1048 DAQRSNENVTKDATQKRV--KVKWRPPTAPKLKLNTDAAIDYKKKKADLGMVVRDGEGKL 1107
Query: 249 -----------------EAMS------------FQRVEVELDSTSIVNLLQRTMKCITEL 308
EA++ FQ + VE DST +++ L +T ++
Sbjct: 1108 KCAGHKVLPGNPSIVAIEALAVYHGLLLYREAGFQNLVVESDSTIVIDALNKTELDLSVE 1167
Query: 309 GKIVKEIWKISSRLTFVSFYWCGRKMNKLAHALAKLAIPMDEETIWVE 318
G ++ +I ++S V + R+ N AH +AK A+ DE+ +W E
Sbjct: 1168 GGVLDDIKCLASTFESVPWKKVNREGNIAAHKMAKHALMADEDRLWQE 1204
BLAST of Sed0019631 vs. NCBI nr
Match:
XP_015385738.1 (uncharacterized protein LOC107177034 [Citrus sinensis])
HSP 1 Score: 106.7 bits (265), Expect = 3.9e-19
Identity = 76/301 (25.25%), Postives = 132/301 (43.85%), Query Frame = 0
Query: 62 NIISLVPNFLERGIDLNESCPRCGKWPESTYHTMWECKGAKKLWVTTPWQELKCPKGITT 121
N++ N R I L +C C + E+T HT+ CK AKK+W P++
Sbjct: 7 NLLPTADNLWRREILLEPTCQICKQGKETTAHTLLLCKAAKKVWRYAPFETCFLDAVNQD 66
Query: 122 FADLVHWVFDSAQQKHFEEFLIMCWCVWRYRNKEVRGGGSDYDGLPMDWNL----CQSCI 181
+++ + + E + +CW +W RNK + ++G M+ L ++ +
Sbjct: 67 MLEIMVEMAKKLTKSDIEVMVAICWTIWYGRNKFL------FEGKKMEPLLTISRAEAVV 126
Query: 182 NEFRETNAKVFSTHREYTQQNSFNKKEWNPLNYPNFKMNTDAAIREEMGSSGMGMVIRN- 241
+R +Y +S N++ W+P FK+N DAA+ + +G+G+VIR+
Sbjct: 127 EAYRRVKQPTLDPEAKY---SSKNQQVWSPPPDNTFKVNVDAAVNFDRQKAGLGVVIRDS 186
Query: 242 ---------------------EKEAM----------SFQRVEVELDSTSIVNLLQRTMKC 301
E EA+ +FQ + VE D +V L+
Sbjct: 187 SNKVKVAAVKSTLFTGDVQTAEAEAVEWGLVVAKSAAFQCIMVESDCQEVVKLINNNEGS 246
Query: 302 ITELGKIVKEIWKISSRLTFVSFYWCGRKMNKLAHALAKLAIPMDEETIWVEEVLMTVEE 327
TE+ ++ EI +S +S+Y R N AH+LAKLA+ +E +W+E + + VE
Sbjct: 247 RTEIMWVISEIQSLSKDFQNISYYHTPRSCNTHAHSLAKLALRNNETVVWLEPIPVEVES 298
BLAST of Sed0019631 vs. NCBI nr
Match:
XP_030964861.1 (uncharacterized protein LOC115986145 [Quercus lobata])
HSP 1 Score: 101.3 bits (251), Expect = 1.6e-17
Identity = 72/288 (25.00%), Postives = 123/288 (42.71%), Query Frame = 0
Query: 62 NIISLVPNFLERGIDLNESCPRCGKWPESTYHTMWECKGAKKLWVTTPWQELKCPKGITT 121
NI+ N + R I ++ C C + E+ H +WEC AK +W + + KC +
Sbjct: 881 NILPTRDNLVRRKILEDDGCMLCSRMAETGVHALWECAVAKDVWSSNMIRLQKCGQDQQD 940
Query: 122 FADLVHWVFDSAQQKHFEEFLIMCWCVWRYRNKEVRGGGSDYDGLPMDW--NLCQSCINE 181
L + + FE FL+ W +W RN + GG W + + +
Sbjct: 941 VLQLFQELMERLSTAKFEAFLVQSWLIWNQRNTVMHGGKLK----DPSWLNKRAKDYLED 1000
Query: 182 FRETNAKVFSTHREYTQQNSFNKKEWNPLNYPNFKMNTDAAIREEMGSSGMGMVIRNEKE 241
F + ++ + +S W P P +K+N DAAI ++G SG+G VIRN +
Sbjct: 1001 FHQAQGQL-----QIPVTSSSGHDTWFPPPEPIYKLNFDAAIFSKLGCSGVGAVIRNVHD 1060
Query: 242 ----AMS----------------------------FQRVEVELDSTSIVNLLQRTMKCIT 301
AMS F + +E D+ +++ + + ++
Sbjct: 1061 EVMAAMSARGPPVIDNSEAEILACRKALEFAVDAGFTDLVIEGDNENVMRSVSASGADLS 1120
Query: 302 ELGKIVKEIWKISSRLTFVSFYWCGRKMNKLAHALAKLAIPMDEETIW 316
LG I+++I ++ L +VSF R N +AH++A+ A +DEE W
Sbjct: 1121 RLGHIIQDIKWLAHGLRWVSFSSIKRGANSVAHSIARYAKTVDEELYW 1159
BLAST of Sed0019631 vs. ExPASy TrEMBL
Match:
A0A2N9EEC8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5198 PE=4 SV=1)
HSP 1 Score: 110.2 bits (274), Expect = 1.7e-20
Identity = 71/261 (27.20%), Postives = 119/261 (45.59%), Query Frame = 0
Query: 69 NFLERGIDLNESCPRCGKWPESTYHTMWECKGAKKLWVTTPWQELKCPKGITTFADLVHW 128
N R + ++ +C C PE H +W C +W W + + FADL
Sbjct: 1090 NLCRRRLPIDPTCENCRNSPEDVLHAVWTCPSIHLVWAQEDWTQGIRASPVMDFADLFSK 1149
Query: 129 VFDSAQQKHFEEFLIMCWCVWRYRNKEVRGGGSDYDGLPMDWNLCQSCINEFRETNAKVF 188
V +A Q++ E F+++ W +W+ RNK + G D + N ++ + EF F
Sbjct: 1150 VLATAYQQNSEVFIVISWLLWQRRNK--KRLGQDVLDIDQVGNKARAYLTEF----VSSF 1209
Query: 189 STHREYTQQNSFNKKEWNPLNYPNFKMNTDAAIREEMGSSGMGMVIRNEKEAMS--FQRV 248
T + N K W P FK+N D A+ +E +G+G+++RN+
Sbjct: 1210 ETPPPTELIPAVNIK-WQPSRDFVFKVNYDGAVFQETNEAGIGVIVRNQAGQGDGYVSPE 1269
Query: 249 EVELDSTSIVNLLQRTMKCITELGKIVKEIWKISSRLTFVSFYWCGRKMNKLAHALAKLA 308
E E DS ++V L + G ++ + ++ LT F R+ N LAHALA++A
Sbjct: 1270 EFEGDSKTVVAALNVSHPSAAPYGHLIADAQSLARALTSFCFSHVKRQGNALAHALARMA 1329
Query: 309 IPMDEETIWVEEVLMTVEELY 328
+D+ +W+E+V + LY
Sbjct: 1330 KTIDDIEVWMEDVPPPTKRLY 1343
BLAST of Sed0019631 vs. ExPASy TrEMBL
Match:
A0A2N9INY3 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53772 PE=4 SV=1)
HSP 1 Score: 107.1 bits (266), Expect = 1.4e-19
Identity = 74/291 (25.43%), Postives = 119/291 (40.89%), Query Frame = 0
Query: 69 NFLERGIDLNESCPRCGKWPESTYHTMWECKGAKKLWVTTPWQELKCPKGITTFADLVHW 128
N R I ++ +C C PE H +W C K W W + + FADL
Sbjct: 1328 NLCRRRIPIDPTCENCRNSPEDALHAVWNCPSIKSAWNQEAWIQGLRASPVMDFADLFSK 1387
Query: 129 VFDSAQQKHFEEFLIMCWCVWRYRNKEVRGGGSDYDGLPMDWNLCQSCINEFRETNAKVF 188
V +A Q++ E F++ W +W+ RNK+ D +D N + + F
Sbjct: 1388 VLATASQQNSEVFIVTSWFLWQRRNKK------RLDQAVLDINQVTNKARAYLNEFVSSF 1447
Query: 189 STHREYTQQNSFNKKEWNPLNYPNFKMNTDAAIREEMGSSGMGMVIRNE----------- 248
T+ N +W P Y NFK+N D A+ +E +G+G+++RN
Sbjct: 1448 EIPPP-TELNPAVNIKWQPSRYNNFKVNYDGAVFKETNKAGIGVIVRNRAGKVMATLVQK 1507
Query: 249 ---------------KEAMSF------QRVEVELDSTSIVNLLQRTMKCITELGKIVKEI 308
K A+ F E E DS ++V L + + G ++ +
Sbjct: 1508 VRYPQSVESIEAWAAKRAVQFVSEIGLSEAEFEGDSKTVVAALNSSHSSSSPYGHLIADA 1567
Query: 309 WKISSRLTFVSFYWCGRKMNKLAHALAKLAIPMDEETIWVEEVLMTVEELY 328
++S L F + N LAHALA++A +D +W+E+V + LY
Sbjct: 1568 KSLASALASYCFTHVKCQGNALAHALARMANTIDSIEVWMEDVPPPTKRLY 1611
BLAST of Sed0019631 vs. ExPASy TrEMBL
Match:
A0A2N9FR17 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS17540 PE=4 SV=1)
HSP 1 Score: 106.7 bits (265), Expect = 1.9e-19
Identity = 76/299 (25.42%), Postives = 126/299 (42.14%), Query Frame = 0
Query: 69 NFLERGIDLNESCPRCGKWPESTYHTMWECKGAKKLWVTTPWQELKCPKGITTFADLVHW 128
N +R I + +C CGK E T H +W CK + +W W + + FADL+
Sbjct: 1189 NLQKRHIPIGTTCELCGKKDEDTIHALWSCKQLQSVWDAEVWIQPLRNSSMVDFADLLCK 1248
Query: 129 VFDSAQQKHFEEFLIMCWCVWRYRNKEVRGGGSDYDGLPMDWNLCQSCINEFRETNAKVF 188
V + E F+I+CW +W+ RNK +R Q ++ + + KV
Sbjct: 1249 VLHLGRDSEPETFIIICWALWQRRNK-IR---------------LQQEVDSINQVDPKVK 1308
Query: 189 STHREYTQQNSFNKKE--------WNPLNYPNFKMNTDAAIREEMGSSGMGMVIRNE--- 248
EYT++ K + W P +K+N D A+ +E +G+ +++R+
Sbjct: 1309 CYLEEYTRETEQTKPQPQPAMTVKWQPPRKLRYKVNFDGAVFKETNEAGIRVIVRDSHGL 1368
Query: 249 -----------------------KEAMSF------QRVEVELDSTSIVNLLQRTMKCITE 308
K A+ F E E DS IV+ L + +
Sbjct: 1369 VMASLTQKVRFPHSVPSIEAWAVKRAIQFVLEIGLTEAEFEGDSQIIVSALNNSHPSLAS 1428
Query: 309 LGKIVKEIWKISSRLTFVSFYWCGRKMNKLAHALAKLAIPMDEETIWVEEVLMTVEELY 328
G ++ + ++S+L SF R+ N+LAHALA+ A+ + +W+E V +E LY
Sbjct: 1429 YGLLITDAKVLASKLQNFSFSHVKRQGNQLAHALARKALSCNSLEVWMESVPPDLELLY 1471
BLAST of Sed0019631 vs. ExPASy TrEMBL
Match:
A0A2N9IV57 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55813 PE=4 SV=1)
HSP 1 Score: 105.1 bits (261), Expect = 5.5e-19
Identity = 74/291 (25.43%), Postives = 123/291 (42.27%), Query Frame = 0
Query: 69 NFLERGIDLNESCPRCGKWPESTYHTMWECKGAKKLWVTTPWQELKCPKGITTFADLVHW 128
N R + ++ +C C PE H +W C +W W + + FADL
Sbjct: 199 NLCRRRLPIDPTCENCRNSPEDVLHAVWTCPSIHLVWAQEDWTQGIRASPVMDFADLFSK 258
Query: 129 VFDSAQQKHFEEFLIMCWCVWRYRNKEVRGGGSDYDGLPMDWNLCQSCINEFRETNAKVF 188
V +A Q++ E F+++ W +W+ RNK + G D + N ++ + EF F
Sbjct: 259 VLATAYQQNSEVFIVISWLLWQRRNK--KRLGQDVLDIDQVGNKARAYLTEF----VSSF 318
Query: 189 STHREYTQQNSFNKKEWNPLNYPNFKMNTDAAIREEMGSSGMGMVIRNE----------- 248
T + N K W P FK+N D A+ +E +G+G+++RN+
Sbjct: 319 ETPPPTELIPAVNIK-WQPSRDFVFKVNYDGAVFQETNEAGIGVIVRNQAGKVMATLVQK 378
Query: 249 ---------------KEAMSF------QRVEVELDSTSIVNLLQRTMKCITELGKIVKEI 308
K A+ F E E DS ++V L + G ++ +
Sbjct: 379 VRYPQSVECIEAWAAKRAVQFISEIGLSEAEFEGDSKTVVAALNVSHPSAAPYGHLIADA 438
Query: 309 WKISSRLTFVSFYWCGRKMNKLAHALAKLAIPMDEETIWVEEVLMTVEELY 328
++ LT F R+ N LAHALA++A +D+ +W+E+V + LY
Sbjct: 439 QSLARALTSFCFSHVKRQGNALAHALARMAKTIDDIEVWMEDVPPPTKRLY 482
BLAST of Sed0019631 vs. ExPASy TrEMBL
Match:
A0A2N9HSI4 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42491 PE=4 SV=1)
HSP 1 Score: 105.1 bits (261), Expect = 5.5e-19
Identity = 74/291 (25.43%), Postives = 123/291 (42.27%), Query Frame = 0
Query: 69 NFLERGIDLNESCPRCGKWPESTYHTMWECKGAKKLWVTTPWQELKCPKGITTFADLVHW 128
N R + ++ +C C PE H +W C +W W + + FADL
Sbjct: 197 NLCRRRLPIDPTCENCRNSPEDVLHAVWTCPSIHLVWAQEDWTQGIRASPVMDFADLFSK 256
Query: 129 VFDSAQQKHFEEFLIMCWCVWRYRNKEVRGGGSDYDGLPMDWNLCQSCINEFRETNAKVF 188
V +A Q++ E F+++ W +W+ RNK + G D + N ++ + EF F
Sbjct: 257 VLATAYQQNSEVFIVISWLLWQRRNK--KRLGQDVLDIDQVGNKARAYLTEF----VSSF 316
Query: 189 STHREYTQQNSFNKKEWNPLNYPNFKMNTDAAIREEMGSSGMGMVIRNE----------- 248
T + N K W P FK+N D A+ +E +G+G+++RN+
Sbjct: 317 ETPPPTELIPAVNIK-WQPSRDFVFKVNYDGAVFQETNEAGIGVIVRNQAGKVMATLVQK 376
Query: 249 ---------------KEAMSF------QRVEVELDSTSIVNLLQRTMKCITELGKIVKEI 308
K A+ F E E DS ++V L + G ++ +
Sbjct: 377 VRYPQSVECIEAWAAKRAVQFISEIGLSEAEFEGDSKTVVAALNVSHPSAAPYGHLIADA 436
Query: 309 WKISSRLTFVSFYWCGRKMNKLAHALAKLAIPMDEETIWVEEVLMTVEELY 328
++ LT F R+ N LAHALA++A +D+ +W+E+V + LY
Sbjct: 437 QSLARALTSFCFSHVKRQGNALAHALARMAKTIDDIEVWMEDVPPPTKRLY 480
BLAST of Sed0019631 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 53.1 bits (126), Expect = 4.8e-07
Identity = 62/298 (20.81%), Postives = 112/298 (37.58%), Query Frame = 0
Query: 61 SNIISLVPNFLERGIDLNESCPRCGKWPESTYHTMWECKGAKKLWVTTPWQELKCPKGIT 120
S ++ RG+ ++ SCPRC + ES H ++ C A W + ++
Sbjct: 180 SQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSN 239
Query: 121 TFADLVHWVFDSAQQKHFEEF-----LIMCWCVWRYRNKEVRGGGSDYDGLPMDWNLCQS 180
F + + + + Q +F + + W +W+ RN V
Sbjct: 240 DFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVV------------------- 299
Query: 181 CINEFRETNAKVF--------------STHREY---TQQNSFNKKEWNPLNYPNFKMNTD 240
N+FRE+ +K +H++ T+Q + NK EW K N D
Sbjct: 300 -FNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYVKCNFD 359
Query: 241 AAIREEMGSSGMGMVIRN----------------------EKEAM----------SFQRV 300
A + + G +IRN E +A+ + +V
Sbjct: 360 AGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGYTQV 419
Query: 301 EVELDSTSIVNLLQRTMKCITELGKIVKEIWKISSRLTFVSFYWCGRKMNKLAHALAK 305
+E D +++NL+ + + L +++I +++ + F + RK NKLAH LAK
Sbjct: 420 FMEGDCQTLINLI-NGISFHSSLANHLEDISFWANKFASIQFGFIRRKGNKLAHVLAK 456
BLAST of Sed0019631 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 52.8 bits (125), Expect = 6.2e-07
Identity = 64/286 (22.38%), Postives = 114/286 (39.86%), Query Frame = 0
Query: 61 SNIISLVPNFLERGIDLNESCPRCGKWPESTYHTMWECKGAKKLWVTTPWQELKCPKGIT 120
SN + + R + +C RC E+ H +++C A+ W + + P G
Sbjct: 275 SNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAIS---SIPIPLG-G 334
Query: 121 TFADLV----HWVFDSAQ-----QKHFEEFLIMCWCVWRYRNKEVRGGGSDYDGLPMDWN 180
+AD + +WVF+ +K + + W +W+ RN E+ G +++ +
Sbjct: 335 EWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRN-ELVFRGREFNAQEV-LR 394
Query: 181 LCQSCINEFR-ETNAKVFSTHREYTQQNSFNKKEWNPLNYPNFKMNTDAAIREEMGSSGM 240
+ + E+R T A+ T Q N + W P + K NTDA + G+
Sbjct: 395 RAEDDLEEWRIRTEAESCGTK---PQVNRSSCGRWRPPPHQWVKCNTDATWNRDNERCGI 454
Query: 241 GMVIRNEK----------------------EAM----------SFQRVEVELDSTSIVNL 300
G V+RNEK EAM + V E DS ++ +
Sbjct: 455 GWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRFQYNYVIFESDSQVLIEI 514
Query: 301 LQRTMKCITELGKIVKEIWKISSRLTFVSFYWCGRKMNKLAHALAK 305
L + L ++++ ++ S+ T V F + R+ N LA +A+
Sbjct: 515 LNND-EIWPSLKPTIQDLQRLLSQFTEVKFVFIPREGNTLAERVAR 550
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2N9EEC8 | 1.7e-20 | 27.20 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2N9INY3 | 1.4e-19 | 25.43 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2N9FR17 | 1.9e-19 | 25.42 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2N9IV57 | 5.5e-19 | 25.43 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55813 PE=4 SV=1 | [more] |
A0A2N9HSI4 | 5.5e-19 | 25.43 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42491 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G09510.1 | 4.8e-07 | 20.81 | Ribonuclease H-like superfamily protein | [more] |
AT4G29090.1 | 6.2e-07 | 22.38 | Ribonuclease H-like superfamily protein | [more] |