Homology
BLAST of Sed0019546 vs. NCBI nr
Match:
XP_038901728.1 (pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Benincasa hispida])
HSP 1 Score: 918.3 bits (2372), Expect = 2.9e-263
Identity = 454/510 (89.02%), Postives = 482/510 (94.51%), Query Frame = 0
Query: 1 MVCAQGSTTLTQFGFSFSLSSGLKTERHGFFTPRLYRRSPVKFSFMVPLITCNHQNSTFS 60
MVCAQG T LTQFGFSFSLSS LKT+RHGF TP+LY PVKF FMV I+CN+Q+STFS
Sbjct: 1 MVCAQGFTPLTQFGFSFSLSSALKTDRHGFSTPQLYSPPPVKFCFMVSRISCNYQDSTFS 60
Query: 61 GSKAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLGEMNDRLS 120
S+AGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVL EMNDRLS
Sbjct: 61 VSRAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120
Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGDHNV 180
AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEG HNV
Sbjct: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGQHNV 180
Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKIISLYWEMDEKEKAISFVKEVLGRKLAFMKDDWEGH 240
GDVVDLLVDMDCVGLKPHFSMIEK+ISLYWEM EKEKAISFVKEVLGR LAFMKDDWEGH
Sbjct: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAISFVKEVLGRNLAFMKDDWEGH 240
Query: 241 KGGPSGYLAWKMMVGGDYKGAVKMVLHLRESGLKPEVYSYLVAMTAVVKELNELAKALRK 300
KGGPSGYLAWKMMV GDY+GAVKMVLHLRESGLKPEVY YL+AMTAVVKELNE AKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
Query: 301 LKSYAKNGVVAELDKDSVKLVERYQTELVADGVQLSRWVLEEGNSSIHGVVHERLLAMYI 360
LKSYA++G+VAELDK++V+LVE+YQTEL+ADGV+LS WVLEEG+ SIHGVVHERLLAMYI
Sbjct: 301 LKSYARDGIVAELDKNNVELVEKYQTELLADGVRLSNWVLEEGSFSIHGVVHERLLAMYI 360
Query: 361 CAGQGVEAERQLWEMKLVGKEADADLYDIVLAICASQKQTRAMSRLLTRIEITSPLLKKK 420
CAGQG+EAERQLWEMKLVGKEADADLYDIVLAICASQK+T+AM RLLTRIEITSP+ KKK
Sbjct: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMRKKK 420
Query: 421 SMTWLLRGYIKGSHFHDAAETLVKMVSLGFLPEYLDRVAVLQGLRKQIWEPENVETYFKL 480
S+TWLLRGYIKG HFHDAAETLVKM+ LGFLPEYLDRVAVLQGLRKQI EPENV+TY L
Sbjct: 421 SLTWLLRGYIKGGHFHDAAETLVKMIDLGFLPEYLDRVAVLQGLRKQIREPENVDTYLDL 480
Query: 481 CKCLSDANLIGPSLVYLHIQKSKLWVIKML 511
CKCLSDANLIGPSLVYLH+QK KLWV+KML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKHKLWVVKML 510
BLAST of Sed0019546 vs. NCBI nr
Match:
KAG7010495.1 (Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 907.1 bits (2343), Expect = 6.7e-260
Identity = 452/510 (88.63%), Postives = 481/510 (94.31%), Query Frame = 0
Query: 1 MVCAQGSTTLTQFGFSFSLSSGLKTERHGFFTPRLYRRSPVKFSFMVPLITCNHQNSTFS 60
M+CAQG + LTQFGFSFSLSSGLK+ER GF P+L RSPV F FMV ITCNHQNSTFS
Sbjct: 1 MICAQGFSPLTQFGFSFSLSSGLKSERLGFSAPQLCSRSPVNFCFMVSRITCNHQNSTFS 60
Query: 61 GSKAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLGEMNDRLS 120
S+AGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTR+PSDVL EMNDRLS
Sbjct: 61 VSRAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTRDPSDVLEEMNDRLS 120
Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGDHNV 180
AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEG HNV
Sbjct: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGQHNV 180
Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKIISLYWEMDEKEKAISFVKEVLGRKLAFMKDDWEGH 240
GDVVDLLVDMDCVGLKPHFSMIEK+ISLYW+M EKEKAISFVKEVLGRKL FMKD+WEGH
Sbjct: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISLYWDMGEKEKAISFVKEVLGRKLDFMKDNWEGH 240
Query: 241 KGGPSGYLAWKMMVGGDYKGAVKMVLHLRESGLKPEVYSYLVAMTAVVKELNELAKALRK 300
KGGPSGYLAWKMMV GDY+GAVKMVL+LRESGLKPEVY YL+AMTAVVKELNE AKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLNLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
Query: 301 LKSYAKNGVVAELDKDSVKLVERYQTELVADGVQLSRWVLEEGNSSIHGVVHERLLAMYI 360
LKSYA++G+VAELDKD+V+LV+RYQ+EL+ADGV+LS WVL+EG SS HGVVHERLLAMYI
Sbjct: 301 LKSYARDGMVAELDKDNVELVKRYQSELLADGVRLSNWVLDEGGSSSHGVVHERLLAMYI 360
Query: 361 CAGQGVEAERQLWEMKLVGKEADADLYDIVLAICASQKQTRAMSRLLTRIEITSPLLKKK 420
CAGQG+EAERQLWEMKLVGKEADADLYDIVLAICASQK+TRAM+RLLTRIEITSP LKKK
Sbjct: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETRAMNRLLTRIEITSPRLKKK 420
Query: 421 SMTWLLRGYIKGSHFHDAAETLVKMVSLGFLPEYLDRVAVLQGLRKQIWEPENVETYFKL 480
S+TWLLRGYIKG HF DAAETLVKMV+LGFLPEYLDRVAVLQGLRK+I EPENVETY L
Sbjct: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVLQGLRKRIREPENVETYLDL 480
Query: 481 CKCLSDANLIGPSLVYLHIQKSKLWVIKML 511
CKCLSDANLIGPSLVYLH+QK KLWVIKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKYKLWVIKML 510
BLAST of Sed0019546 vs. NCBI nr
Match:
XP_023512972.1 (pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 905.6 bits (2339), Expect = 1.9e-259
Identity = 452/510 (88.63%), Postives = 480/510 (94.12%), Query Frame = 0
Query: 1 MVCAQGSTTLTQFGFSFSLSSGLKTERHGFFTPRLYRRSPVKFSFMVPLITCNHQNSTFS 60
M+CAQG T LTQFGFSFSLSSGLK+ER GF P+L RSPV F FMV ITCNHQNSTFS
Sbjct: 1 MICAQGFTPLTQFGFSFSLSSGLKSERLGFSAPQLCSRSPVNFCFMVSRITCNHQNSTFS 60
Query: 61 GSKAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLGEMNDRLS 120
S+AGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTR+PSDVL EMNDRLS
Sbjct: 61 VSRAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTRDPSDVLEEMNDRLS 120
Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGDHNV 180
AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEG HNV
Sbjct: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGQHNV 180
Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKIISLYWEMDEKEKAISFVKEVLGRKLAFMKDDWEGH 240
GDVVDLLVDMDCVGLKPHFSMIEK+ISLYW+M EKEKAISFVKEVLGRKL FMKD+WEGH
Sbjct: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISLYWDMGEKEKAISFVKEVLGRKLDFMKDNWEGH 240
Query: 241 KGGPSGYLAWKMMVGGDYKGAVKMVLHLRESGLKPEVYSYLVAMTAVVKELNELAKALRK 300
KGGPSGYLAWKMMV GDY+GAVKMVL+LRESGLKPEVY YL+AMTAVVKELNE AKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLNLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
Query: 301 LKSYAKNGVVAELDKDSVKLVERYQTELVADGVQLSRWVLEEGNSSIHGVVHERLLAMYI 360
LKSYA++G+VAELDKD+V+LV+RYQ+EL+ADGV+LS WVL+EG SS H VVHERLLAMYI
Sbjct: 301 LKSYARDGMVAELDKDNVELVKRYQSELLADGVRLSNWVLDEGGSSSHRVVHERLLAMYI 360
Query: 361 CAGQGVEAERQLWEMKLVGKEADADLYDIVLAICASQKQTRAMSRLLTRIEITSPLLKKK 420
CAGQG+EAERQLWEMKLVGKEADADLYDIVLAICASQK+TRAM+RLLTRIEITSP LKKK
Sbjct: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETRAMNRLLTRIEITSPRLKKK 420
Query: 421 SMTWLLRGYIKGSHFHDAAETLVKMVSLGFLPEYLDRVAVLQGLRKQIWEPENVETYFKL 480
S+TWLLRGYIKG HF DAAETLVKMV+LGFLPEYLDRVAVLQGLRK+I EPENVETY L
Sbjct: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVLQGLRKRIREPENVETYLDL 480
Query: 481 CKCLSDANLIGPSLVYLHIQKSKLWVIKML 511
CKCLSDANLIGPSLVYLH+QK KLWVIKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKYKLWVIKML 510
BLAST of Sed0019546 vs. NCBI nr
Match:
XP_022944005.1 (pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Cucurbita moschata])
HSP 1 Score: 905.6 bits (2339), Expect = 1.9e-259
Identity = 452/510 (88.63%), Postives = 480/510 (94.12%), Query Frame = 0
Query: 1 MVCAQGSTTLTQFGFSFSLSSGLKTERHGFFTPRLYRRSPVKFSFMVPLITCNHQNSTFS 60
M+CAQG T LTQFGFSFSLSSGLK+ER GF P+L RSPV F FMV ITCNHQNSTFS
Sbjct: 1 MICAQGFTPLTQFGFSFSLSSGLKSERLGFSAPQLCSRSPVNFCFMVSRITCNHQNSTFS 60
Query: 61 GSKAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLGEMNDRLS 120
S+AGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTR+PSDVL EMNDRLS
Sbjct: 61 VSRAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTRDPSDVLEEMNDRLS 120
Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGDHNV 180
AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEG HNV
Sbjct: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGQHNV 180
Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKIISLYWEMDEKEKAISFVKEVLGRKLAFMKDDWEGH 240
DVVDLLVDMDCVGLKPHFSMIEK+ISLYW+M EKEKAISFVKEVLGRKL FMKD+WEGH
Sbjct: 181 RDVVDLLVDMDCVGLKPHFSMIEKVISLYWDMGEKEKAISFVKEVLGRKLDFMKDNWEGH 240
Query: 241 KGGPSGYLAWKMMVGGDYKGAVKMVLHLRESGLKPEVYSYLVAMTAVVKELNELAKALRK 300
KGGPSGYLAWKMMV GDY+GAVKMVL+LRESGLKPEVY YL+AMTAVVKELNE AKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLNLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
Query: 301 LKSYAKNGVVAELDKDSVKLVERYQTELVADGVQLSRWVLEEGNSSIHGVVHERLLAMYI 360
LKSYA++G+VAELDKD+V+LV+RYQ+EL+ADGV+LS WVL+EG SS HGVVHERLLAMYI
Sbjct: 301 LKSYARDGMVAELDKDNVELVKRYQSELLADGVRLSNWVLDEGGSSSHGVVHERLLAMYI 360
Query: 361 CAGQGVEAERQLWEMKLVGKEADADLYDIVLAICASQKQTRAMSRLLTRIEITSPLLKKK 420
CAGQG+EAERQLWEMKLVGKEADADLYDIVLAICASQK+TRAM+RLLTRIEITSP LKKK
Sbjct: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETRAMNRLLTRIEITSPRLKKK 420
Query: 421 SMTWLLRGYIKGSHFHDAAETLVKMVSLGFLPEYLDRVAVLQGLRKQIWEPENVETYFKL 480
S+TWLLRGYIKG HF DAAETLVKMV+LGFLPEYLDRVAVLQGLRK+I EPENVETY L
Sbjct: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVLQGLRKRIREPENVETYLDL 480
Query: 481 CKCLSDANLIGPSLVYLHIQKSKLWVIKML 511
CKCLSDANLIGPSLVYLH+QK KLWVIKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKYKLWVIKML 510
BLAST of Sed0019546 vs. NCBI nr
Match:
KAG6570645.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 905.2 bits (2338), Expect = 2.5e-259
Identity = 451/510 (88.43%), Postives = 480/510 (94.12%), Query Frame = 0
Query: 1 MVCAQGSTTLTQFGFSFSLSSGLKTERHGFFTPRLYRRSPVKFSFMVPLITCNHQNSTFS 60
M+CAQG + LTQFGFSFSLSSGLK+ER GF P+L RSPV F FMV ITCNHQNSTFS
Sbjct: 1 MICAQGFSPLTQFGFSFSLSSGLKSERLGFSAPQLCSRSPVNFCFMVSRITCNHQNSTFS 60
Query: 61 GSKAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLGEMNDRLS 120
S+AGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERM R+PSDVL EMNDRLS
Sbjct: 61 VSRAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMARDPSDVLEEMNDRLS 120
Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGDHNV 180
AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEG HNV
Sbjct: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGQHNV 180
Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKIISLYWEMDEKEKAISFVKEVLGRKLAFMKDDWEGH 240
GDVVDLLVDMDCVGLKPHFSMIEK+ISLYW+M EKEKAISFVKEVLGRKL FMKD+WEGH
Sbjct: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISLYWDMGEKEKAISFVKEVLGRKLDFMKDNWEGH 240
Query: 241 KGGPSGYLAWKMMVGGDYKGAVKMVLHLRESGLKPEVYSYLVAMTAVVKELNELAKALRK 300
KGGPSGYLAWKMMV GDY+GAVKMVL+LRESGLKPEVY YL+AMTAVVKELNE AKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLNLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
Query: 301 LKSYAKNGVVAELDKDSVKLVERYQTELVADGVQLSRWVLEEGNSSIHGVVHERLLAMYI 360
LKSYA++G+VAELDKD+V+LV+RYQ+EL+ADGV+LS WVL+EG SS HGVVHERLLAMYI
Sbjct: 301 LKSYARDGMVAELDKDNVELVKRYQSELLADGVRLSNWVLDEGGSSSHGVVHERLLAMYI 360
Query: 361 CAGQGVEAERQLWEMKLVGKEADADLYDIVLAICASQKQTRAMSRLLTRIEITSPLLKKK 420
CAGQG+EAERQLWEMKLVGKEADADLYDIVLAICASQK+TRAM+RLLTRIEITSP LKKK
Sbjct: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETRAMNRLLTRIEITSPRLKKK 420
Query: 421 SMTWLLRGYIKGSHFHDAAETLVKMVSLGFLPEYLDRVAVLQGLRKQIWEPENVETYFKL 480
S+TWLLRGYIKG HF DAAETLVKMV+LGFLPEYLDRVAVLQGLRK+I EPENVETY L
Sbjct: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVLQGLRKRIREPENVETYLDL 480
Query: 481 CKCLSDANLIGPSLVYLHIQKSKLWVIKML 511
CKCLSDANLIGPSLVYLH+QK KLWVIKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKYKLWVIKML 510
BLAST of Sed0019546 vs. ExPASy Swiss-Prot
Match:
Q0WNN7 (Pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g30100 PE=2 SV=2)
HSP 1 Score: 595.5 bits (1534), Expect = 5.7e-169
Identity = 303/491 (61.71%), Postives = 376/491 (76.58%), Query Frame = 0
Query: 31 FTPRLYRRSPVKFSFMVPLITCNHQNSTFSGSKAGKFRDLRLFKSVELDQFITSDDE--- 90
F PRL+R VK + I CN + AGKFR++ L +SVELDQFITS++E
Sbjct: 20 FLPRLHRNHSVKPN---SRIICNLK----LNYSAGKFREMGLSRSVELDQFITSEEEEGE 79
Query: 91 -DEMGDGFFEAIEELERMTREPSDVLGEMNDRLSAREFQLVLVYFSQEGRDSWCALEVFE 150
+E+G+GFFEAIEELERMTREPSD+L EMN RLS+RE QL+LVYF+QEGRDSWC LEVFE
Sbjct: 80 AEEIGEGFFEAIEELERMTREPSDILEEMNHRLSSRELQLMLVYFAQEGRDSWCTLEVFE 139
Query: 151 WLQKENRVDKETMELMVSIMCSWIKKLVEGDHNVGDVVDLLVDMDCVGLKPHFSMIEKII 210
WL+KENRVD+E MELMVSIMC W+KKL+E + N V DLL++MDCVGLKP FSM++K+I
Sbjct: 140 WLKKENRVDEEIMELMVSIMCGWVKKLIEDECNAHQVFDLLIEMDCVGLKPGFSMMDKVI 199
Query: 211 SLYWEMDEKEKAISFVKEVLGRKLAFMKD-----DWEGHKGGPSGYLAWKMMVGGDYKGA 270
+LY EM +KE A+ FVKEVL R+ F EG KGGP GYLAWK MV GDY+ A
Sbjct: 200 ALYCEMGKKESAVLFVKEVLRRRDGFGYSVVGGGGSEGRKGGPVGYLAWKFMVDGDYRKA 259
Query: 271 VKMVLHLRESGLKPEVYSYLVAMTAVVKELNELAKALRKLKSYAKNGVVAELDKDSVKLV 330
V MV+ LR SGLKPE YSYL+AMTA+VKELN L K LR+LK +A+ G VAE+D L+
Sbjct: 260 VDMVMELRLSGLKPEAYSYLIAMTAIVKELNSLGKTLRELKRFARAGFVAEIDDHDRVLI 319
Query: 331 ERYQTELVADGVQLSRWVLEEG--NSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLVG 390
E+YQ+E ++ G+QL+ W +EEG N SI GVVHERLLAMYICAG+G EAE+QLW+MKL G
Sbjct: 320 EKYQSETLSRGLQLATWAVEEGQENDSIIGVVHERLLAMYICAGRGPEAEKQLWKMKLAG 379
Query: 391 KEADADLYDIVLAICASQKQTRAMSRLLTRIEITSPLLKKKSMTWLLRGYIKGSHFHDAA 450
+E +ADL+DIV+AICASQK+ A+SRLLTR+E KKK+++WLLRGY+KG HF +AA
Sbjct: 380 REPEADLHDIVMAICASQKEVNAVSRLLTRVEFMGSQRKKKTLSWLLRGYVKGGHFEEAA 439
Query: 451 ETLVKMVSLGFLPEYLDRVAVLQGLRKQIWEPENVETYFKLCKCLSDANLIGPSLVYLHI 510
ETLV M+ G PEY+DRVAV+QG+ ++I P +VE Y LCK L DA L+GP LVY++I
Sbjct: 440 ETLVSMIDSGLHPEYIDRVAVMQGMTRKIQRPRDVEAYMSLCKRLFDAGLVGPCLVYMYI 499
BLAST of Sed0019546 vs. ExPASy Swiss-Prot
Match:
Q0WVV0 (Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g10910 PE=2 SV=1)
HSP 1 Score: 52.4 bits (124), Expect = 1.8e-05
Identity = 45/215 (20.93%), Postives = 84/215 (39.07%), Query Frame = 0
Query: 252 MMVGGDYKGAVKMVLHLRESGLKPEVYSYLVAMTAVVKELNELAKALRKLKSYAKNGVVA 311
++ G +K+ ++ GLKP+V +Y + +K N KA+ + NG+
Sbjct: 176 LVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGI-- 235
Query: 312 ELDKDSVKLVERYQTELVADGVQLSRWVLEEGNSSIHGVVHERLLAMYICAGQGVEAERQ 371
+ V++ +LA+ G+ EAE
Sbjct: 236 ----------------------------------QMDSVMYGTVLAICASNGRSEEAENF 295
Query: 372 LWEMKLVGKEADADLYDIVLAICASQKQTRAMSRLLTRIEITSPLLKKKSMTWLLRGYIK 431
+ +MK+ G + Y +L + + + L+T ++ + K MT LL+ YIK
Sbjct: 296 IQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIK 354
Query: 432 GSHFHDAAETLVKMVSLGFLPEYLDRVAVLQGLRK 467
G F + E L ++ S G+ + ++ GL K
Sbjct: 356 GGLFDRSRELLSELESAGYAENEMPYCMLMDGLSK 354
BLAST of Sed0019546 vs. ExPASy TrEMBL
Match:
A0A6J1FYE9 (pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111448564 PE=4 SV=1)
HSP 1 Score: 905.6 bits (2339), Expect = 9.4e-260
Identity = 452/510 (88.63%), Postives = 480/510 (94.12%), Query Frame = 0
Query: 1 MVCAQGSTTLTQFGFSFSLSSGLKTERHGFFTPRLYRRSPVKFSFMVPLITCNHQNSTFS 60
M+CAQG T LTQFGFSFSLSSGLK+ER GF P+L RSPV F FMV ITCNHQNSTFS
Sbjct: 1 MICAQGFTPLTQFGFSFSLSSGLKSERLGFSAPQLCSRSPVNFCFMVSRITCNHQNSTFS 60
Query: 61 GSKAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLGEMNDRLS 120
S+AGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTR+PSDVL EMNDRLS
Sbjct: 61 VSRAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTRDPSDVLEEMNDRLS 120
Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGDHNV 180
AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEG HNV
Sbjct: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGQHNV 180
Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKIISLYWEMDEKEKAISFVKEVLGRKLAFMKDDWEGH 240
DVVDLLVDMDCVGLKPHFSMIEK+ISLYW+M EKEKAISFVKEVLGRKL FMKD+WEGH
Sbjct: 181 RDVVDLLVDMDCVGLKPHFSMIEKVISLYWDMGEKEKAISFVKEVLGRKLDFMKDNWEGH 240
Query: 241 KGGPSGYLAWKMMVGGDYKGAVKMVLHLRESGLKPEVYSYLVAMTAVVKELNELAKALRK 300
KGGPSGYLAWKMMV GDY+GAVKMVL+LRESGLKPEVY YL+AMTAVVKELNE AKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLNLRESGLKPEVYCYLIAMTAVVKELNEFAKALRK 300
Query: 301 LKSYAKNGVVAELDKDSVKLVERYQTELVADGVQLSRWVLEEGNSSIHGVVHERLLAMYI 360
LKSYA++G+VAELDKD+V+LV+RYQ+EL+ADGV+LS WVL+EG SS HGVVHERLLAMYI
Sbjct: 301 LKSYARDGMVAELDKDNVELVKRYQSELLADGVRLSNWVLDEGGSSSHGVVHERLLAMYI 360
Query: 361 CAGQGVEAERQLWEMKLVGKEADADLYDIVLAICASQKQTRAMSRLLTRIEITSPLLKKK 420
CAGQG+EAERQLWEMKLVGKEADADLYDIVLAICASQK+TRAM+RLLTRIEITSP LKKK
Sbjct: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETRAMNRLLTRIEITSPRLKKK 420
Query: 421 SMTWLLRGYIKGSHFHDAAETLVKMVSLGFLPEYLDRVAVLQGLRKQIWEPENVETYFKL 480
S+TWLLRGYIKG HF DAAETLVKMV+LGFLPEYLDRVAVLQGLRK+I EPENVETY L
Sbjct: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVLQGLRKRIREPENVETYLDL 480
Query: 481 CKCLSDANLIGPSLVYLHIQKSKLWVIKML 511
CKCLSDANLIGPSLVYLH+QK KLWVIKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKYKLWVIKML 510
BLAST of Sed0019546 vs. ExPASy TrEMBL
Match:
A0A6J1JH85 (pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111484464 PE=4 SV=1)
HSP 1 Score: 899.0 bits (2322), Expect = 8.8e-258
Identity = 447/510 (87.65%), Postives = 481/510 (94.31%), Query Frame = 0
Query: 1 MVCAQGSTTLTQFGFSFSLSSGLKTERHGFFTPRLYRRSPVKFSFMVPLITCNHQNSTFS 60
M+CA G T LT+FGFSFSLSSGLK++R GF P+L RSPV F F+V ITCNHQNSTFS
Sbjct: 1 MICAPGFTPLTKFGFSFSLSSGLKSKRLGFSAPQLCSRSPVNFCFIVSRITCNHQNSTFS 60
Query: 61 GSKAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLGEMNDRLS 120
S+AGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTR+PSDVL EMNDRLS
Sbjct: 61 VSRAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTRDPSDVLEEMNDRLS 120
Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGDHNV 180
AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEG HNV
Sbjct: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGQHNV 180
Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKIISLYWEMDEKEKAISFVKEVLGRKLAFMKDDWEGH 240
GDVVDLLVDMDCVGLKPHFSMIEK+ISLYW+M EKEKAISFVKEVLGRKL FMKD+WEGH
Sbjct: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISLYWDMGEKEKAISFVKEVLGRKLDFMKDNWEGH 240
Query: 241 KGGPSGYLAWKMMVGGDYKGAVKMVLHLRESGLKPEVYSYLVAMTAVVKELNELAKALRK 300
KGGPSGYLAWKMMV GDY+GAVKMVL+LRESGLKPEVY +L+AMTAVVKELNE AKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLNLRESGLKPEVYCFLIAMTAVVKELNEFAKALRK 300
Query: 301 LKSYAKNGVVAELDKDSVKLVERYQTELVADGVQLSRWVLEEGNSSIHGVVHERLLAMYI 360
LKSYA++G+VAELDKD+V+LV+RYQ+EL+ADGV+LS WVL+EG+SS HGVVHERLLAMYI
Sbjct: 301 LKSYARDGMVAELDKDNVELVKRYQSELLADGVRLSNWVLDEGSSSSHGVVHERLLAMYI 360
Query: 361 CAGQGVEAERQLWEMKLVGKEADADLYDIVLAICASQKQTRAMSRLLTRIEITSPLLKKK 420
CAGQG+EAERQLWEMKLVGKEADADLYDIVLAICASQK+TRAM+RLL+RIEITSP LKKK
Sbjct: 361 CAGQGLEAERQLWEMKLVGKEADADLYDIVLAICASQKETRAMNRLLSRIEITSPRLKKK 420
Query: 421 SMTWLLRGYIKGSHFHDAAETLVKMVSLGFLPEYLDRVAVLQGLRKQIWEPENVETYFKL 480
S+TWLLRGYIKG HF DAAETLVKMV+LGFLPEYLDRVAVLQGLRK+I EPENVETY L
Sbjct: 421 SLTWLLRGYIKGGHFRDAAETLVKMVNLGFLPEYLDRVAVLQGLRKRIREPENVETYLDL 480
Query: 481 CKCLSDANLIGPSLVYLHIQKSKLWVIKML 511
CKCLSDANLIGPSLVYLH+QK KLWVIKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKYKLWVIKML 510
BLAST of Sed0019546 vs. ExPASy TrEMBL
Match:
A0A6J1D3T2 (pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111017036 PE=4 SV=1)
HSP 1 Score: 899.0 bits (2322), Expect = 8.8e-258
Identity = 449/511 (87.87%), Postives = 478/511 (93.54%), Query Frame = 0
Query: 1 MVCAQGSTTLTQFGFSFSLSSGLKTERHGFF-TPRLYRRSPVKFSFMVPLITCNHQNSTF 60
M+CAQG T +TQFGFSFSLSS LKT+R FF TP+LY SPV F FM+ ITCNH+NSTF
Sbjct: 1 MICAQGFTPVTQFGFSFSLSSALKTQRQRFFSTPQLYCHSPVNFCFMISCITCNHRNSTF 60
Query: 61 SGSKAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLGEMNDRL 120
S KAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVL EMNDRL
Sbjct: 61 SVLKAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRL 120
Query: 121 SAREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGDHN 180
SAREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGDHN
Sbjct: 121 SAREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGDHN 180
Query: 181 VGDVVDLLVDMDCVGLKPHFSMIEKIISLYWEMDEKEKAISFVKEVLGRKLAFMKDDWEG 240
VGDVVDLLVDMDCVGLKPHFSMIEK+ISLYWEM EKE+AISFVKEVLGRK+AFMKDD EG
Sbjct: 181 VGDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEQAISFVKEVLGRKIAFMKDDREG 240
Query: 241 HKGGPSGYLAWKMMVGGDYKGAVKMVLHLRESGLKPEVYSYLVAMTAVVKELNELAKALR 300
HKGGPSGYLAWKMMV GDY+GAVK+VLHLRESGL PEVYSYL+AMTAVVKELNE AKALR
Sbjct: 241 HKGGPSGYLAWKMMVDGDYRGAVKLVLHLRESGLNPEVYSYLIAMTAVVKELNEFAKALR 300
Query: 301 KLKSYAKNGVVAELDKDSVKLVERYQTELVADGVQLSRWVLEEGNSSIHGVVHERLLAMY 360
KLKSY ++G+VAELDKD+V LVE YQTEL+ADGV+LS WVLEEG+SSIHGV HERLLAMY
Sbjct: 301 KLKSYTRDGIVAELDKDNVGLVEIYQTELLADGVRLSNWVLEEGSSSIHGVAHERLLAMY 360
Query: 361 ICAGQGVEAERQLWEMKLVGKEADADLYDIVLAICASQKQTRAMSRLLTRIEITSPLLKK 420
ICAG+G+EAERQLWEMKLVGKEAD+DLYDIVLAICASQK+TRAM+RLLTRIEI SPLLKK
Sbjct: 361 ICAGRGLEAERQLWEMKLVGKEADSDLYDIVLAICASQKETRAMNRLLTRIEIISPLLKK 420
Query: 421 KSMTWLLRGYIKGSHFHDAAETLVKMVSLGFLPEYLDRVAVLQGLRKQIWEPENVETYFK 480
KS++WLLRGYIKG HF DAAETLVKMV LGFLPEYLDRVAVLQGLRK+I EP +VETYFK
Sbjct: 421 KSLSWLLRGYIKGGHFSDAAETLVKMVDLGFLPEYLDRVAVLQGLRKRIREPGSVETYFK 480
Query: 481 LCKCLSDANLIGPSLVYLHIQKSKLWVIKML 511
LCKCLSDANLIGP LVYLH+QK KLWVIKML
Sbjct: 481 LCKCLSDANLIGPGLVYLHLQKHKLWVIKML 511
BLAST of Sed0019546 vs. ExPASy TrEMBL
Match:
A0A0A0KC35 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G182120 PE=4 SV=1)
HSP 1 Score: 876.3 bits (2263), Expect = 6.1e-251
Identity = 438/510 (85.88%), Postives = 470/510 (92.16%), Query Frame = 0
Query: 1 MVCAQGSTTLTQFGFSFSLSSGLKTERHGFFTPRLYRRSPVKFSFMVPLITCNHQNSTFS 60
M+CAQG T LTQFGFSFSLSS L+++R GF TPRLY SP I+CN+Q+STFS
Sbjct: 1 MICAQGFTPLTQFGFSFSLSSPLESQRCGFSTPRLYMVSP---------ISCNYQDSTFS 60
Query: 61 GSKAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLGEMNDRLS 120
S+A KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVL EMNDRLS
Sbjct: 61 VSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120
Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGDHNV 180
ARE QLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEG HNV
Sbjct: 121 AREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGRHNV 180
Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKIISLYWEMDEKEKAISFVKEVLGRKLAFMKDDWEGH 240
GDVVDLLVDMDCVGLKPHFSMIEK+ISLYWEM EKEKA+ FVKEVLGR LAFMKDDWEGH
Sbjct: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAVFFVKEVLGRNLAFMKDDWEGH 240
Query: 241 KGGPSGYLAWKMMVGGDYKGAVKMVLHLRESGLKPEVYSYLVAMTAVVKELNELAKALRK 300
KGGPSGYLAWKMMV GDY+GAVKMVLHLRESGL+PEVYSYL+AMTAVVKELNE AKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRK 300
Query: 301 LKSYAKNGVVAELDKDSVKLVERYQTELVADGVQLSRWVLEEGNSSIHGVVHERLLAMYI 360
LK YA++G VAELDK++V+LV +YQTEL+ADGVQLS WVLEEG+SSI GVVHERLLAMYI
Sbjct: 301 LKGYARDGFVAELDKNNVELVAKYQTELLADGVQLSNWVLEEGSSSIRGVVHERLLAMYI 360
Query: 361 CAGQGVEAERQLWEMKLVGKEADADLYDIVLAICASQKQTRAMSRLLTRIEITSPLLKKK 420
CAGQGVEAERQLWEMKLVGKEADADLYDIVLAICASQK+T+AM RLLTRIEITSP++KKK
Sbjct: 361 CAGQGVEAERQLWEMKLVGKEADADLYDIVLAICASQKETKAMKRLLTRIEITSPMIKKK 420
Query: 421 SMTWLLRGYIKGSHFHDAAETLVKMVSLGFLPEYLDRVAVLQGLRKQIWEPENVETYFKL 480
S+TWLLRGYIKG HF DAA TLVKM++LGFLPEYLDRVAVLQGLRK+I EPE+V TY L
Sbjct: 421 SLTWLLRGYIKGGHFRDAAGTLVKMINLGFLPEYLDRVAVLQGLRKEIREPESVHTYLDL 480
Query: 481 CKCLSDANLIGPSLVYLHIQKSKLWVIKML 511
CKCLSDANLIGPSLVYLH+QK KLW+IKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKHKLWIIKML 501
BLAST of Sed0019546 vs. ExPASy TrEMBL
Match:
A0A1S3CNE0 (pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103502924 PE=4 SV=1)
HSP 1 Score: 873.6 bits (2256), Expect = 4.0e-250
Identity = 437/510 (85.69%), Postives = 469/510 (91.96%), Query Frame = 0
Query: 1 MVCAQGSTTLTQFGFSFSLSSGLKTERHGFFTPRLYRRSPVKFSFMVPLITCNHQNSTFS 60
M+CAQG T LTQFGFSFSLSS L+T+R+GF TPRLY SP I+CN+Q+STFS
Sbjct: 1 MICAQGFTPLTQFGFSFSLSSPLETQRYGFSTPRLYMVSP---------ISCNYQDSTFS 60
Query: 61 GSKAGKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLGEMNDRLS 120
S+A KFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVL EMNDRLS
Sbjct: 61 VSRAAKFRDLRLFKSVELDQFITSDDEDEMGDGFFEAIEELERMTREPSDVLEEMNDRLS 120
Query: 121 AREFQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWIKKLVEGDHNV 180
ARE QLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWI KLVEG HNV
Sbjct: 121 AREIQLVLVYFSQEGRDSWCALEVFEWLQKENRVDKETMELMVSIMCSWINKLVEGRHNV 180
Query: 181 GDVVDLLVDMDCVGLKPHFSMIEKIISLYWEMDEKEKAISFVKEVLGRKLAFMKDDWEGH 240
GDVVDLLVDMDCVGLKPHFSMIEK+ISLYWEM EKEKAI FVKEVLGR LAFMKDDWEGH
Sbjct: 181 GDVVDLLVDMDCVGLKPHFSMIEKVISLYWEMGEKEKAIFFVKEVLGRNLAFMKDDWEGH 240
Query: 241 KGGPSGYLAWKMMVGGDYKGAVKMVLHLRESGLKPEVYSYLVAMTAVVKELNELAKALRK 300
KGGPSGYLAWKMMV GDY+GAVKMVLHLRESGL+PEVYSYL+AMTAVVKELNE AKALRK
Sbjct: 241 KGGPSGYLAWKMMVDGDYRGAVKMVLHLRESGLRPEVYSYLIAMTAVVKELNEFAKALRK 300
Query: 301 LKSYAKNGVVAELDKDSVKLVERYQTELVADGVQLSRWVLEEGNSSIHGVVHERLLAMYI 360
LKSYA++G VAELDK++V+LV +YQTEL+ADGV+LS WVLEEG+SSIHGVVHERLLAMYI
Sbjct: 301 LKSYARDGYVAELDKNNVELVAKYQTELLADGVRLSNWVLEEGSSSIHGVVHERLLAMYI 360
Query: 361 CAGQGVEAERQLWEMKLVGKEADADLYDIVLAICASQKQTRAMSRLLTRIEITSPLLKKK 420
CAGQGVEAERQLWEMKL+GKEADADLYDIVLAICASQK+ +AM RLLTRIEITSP++KKK
Sbjct: 361 CAGQGVEAERQLWEMKLLGKEADADLYDIVLAICASQKEIKAMKRLLTRIEITSPMIKKK 420
Query: 421 SMTWLLRGYIKGSHFHDAAETLVKMVSLGFLPEYLDRVAVLQGLRKQIWEPENVETYFKL 480
S+TWLLRGYIKG HF DAA T+VKM++LGFLPEYLDRVAVLQGLRK I EPE V TY L
Sbjct: 421 SLTWLLRGYIKGGHFRDAAGTVVKMINLGFLPEYLDRVAVLQGLRKGIREPEIVHTYLDL 480
Query: 481 CKCLSDANLIGPSLVYLHIQKSKLWVIKML 511
CKCLSDANLIGPSLVYLH+QK KLW+IKML
Sbjct: 481 CKCLSDANLIGPSLVYLHLQKHKLWIIKML 501
BLAST of Sed0019546 vs. TAIR 10
Match:
AT2G30100.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 595.5 bits (1534), Expect = 4.0e-170
Identity = 303/491 (61.71%), Postives = 376/491 (76.58%), Query Frame = 0
Query: 31 FTPRLYRRSPVKFSFMVPLITCNHQNSTFSGSKAGKFRDLRLFKSVELDQFITSDDE--- 90
F PRL+R VK + I CN + AGKFR++ L +SVELDQFITS++E
Sbjct: 20 FLPRLHRNHSVKPN---SRIICNLK----LNYSAGKFREMGLSRSVELDQFITSEEEEGE 79
Query: 91 -DEMGDGFFEAIEELERMTREPSDVLGEMNDRLSAREFQLVLVYFSQEGRDSWCALEVFE 150
+E+G+GFFEAIEELERMTREPSD+L EMN RLS+RE QL+LVYF+QEGRDSWC LEVFE
Sbjct: 80 AEEIGEGFFEAIEELERMTREPSDILEEMNHRLSSRELQLMLVYFAQEGRDSWCTLEVFE 139
Query: 151 WLQKENRVDKETMELMVSIMCSWIKKLVEGDHNVGDVVDLLVDMDCVGLKPHFSMIEKII 210
WL+KENRVD+E MELMVSIMC W+KKL+E + N V DLL++MDCVGLKP FSM++K+I
Sbjct: 140 WLKKENRVDEEIMELMVSIMCGWVKKLIEDECNAHQVFDLLIEMDCVGLKPGFSMMDKVI 199
Query: 211 SLYWEMDEKEKAISFVKEVLGRKLAFMKD-----DWEGHKGGPSGYLAWKMMVGGDYKGA 270
+LY EM +KE A+ FVKEVL R+ F EG KGGP GYLAWK MV GDY+ A
Sbjct: 200 ALYCEMGKKESAVLFVKEVLRRRDGFGYSVVGGGGSEGRKGGPVGYLAWKFMVDGDYRKA 259
Query: 271 VKMVLHLRESGLKPEVYSYLVAMTAVVKELNELAKALRKLKSYAKNGVVAELDKDSVKLV 330
V MV+ LR SGLKPE YSYL+AMTA+VKELN L K LR+LK +A+ G VAE+D L+
Sbjct: 260 VDMVMELRLSGLKPEAYSYLIAMTAIVKELNSLGKTLRELKRFARAGFVAEIDDHDRVLI 319
Query: 331 ERYQTELVADGVQLSRWVLEEG--NSSIHGVVHERLLAMYICAGQGVEAERQLWEMKLVG 390
E+YQ+E ++ G+QL+ W +EEG N SI GVVHERLLAMYICAG+G EAE+QLW+MKL G
Sbjct: 320 EKYQSETLSRGLQLATWAVEEGQENDSIIGVVHERLLAMYICAGRGPEAEKQLWKMKLAG 379
Query: 391 KEADADLYDIVLAICASQKQTRAMSRLLTRIEITSPLLKKKSMTWLLRGYIKGSHFHDAA 450
+E +ADL+DIV+AICASQK+ A+SRLLTR+E KKK+++WLLRGY+KG HF +AA
Sbjct: 380 REPEADLHDIVMAICASQKEVNAVSRLLTRVEFMGSQRKKKTLSWLLRGYVKGGHFEEAA 439
Query: 451 ETLVKMVSLGFLPEYLDRVAVLQGLRKQIWEPENVETYFKLCKCLSDANLIGPSLVYLHI 510
ETLV M+ G PEY+DRVAV+QG+ ++I P +VE Y LCK L DA L+GP LVY++I
Sbjct: 440 ETLVSMIDSGLHPEYIDRVAVMQGMTRKIQRPRDVEAYMSLCKRLFDAGLVGPCLVYMYI 499
BLAST of Sed0019546 vs. TAIR 10
Match:
AT1G10910.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 52.4 bits (124), Expect = 1.3e-06
Identity = 45/215 (20.93%), Postives = 84/215 (39.07%), Query Frame = 0
Query: 252 MMVGGDYKGAVKMVLHLRESGLKPEVYSYLVAMTAVVKELNELAKALRKLKSYAKNGVVA 311
++ G +K+ ++ GLKP+V +Y + +K N KA+ + NG+
Sbjct: 176 LVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGI-- 235
Query: 312 ELDKDSVKLVERYQTELVADGVQLSRWVLEEGNSSIHGVVHERLLAMYICAGQGVEAERQ 371
+ V++ +LA+ G+ EAE
Sbjct: 236 ----------------------------------QMDSVMYGTVLAICASNGRSEEAENF 295
Query: 372 LWEMKLVGKEADADLYDIVLAICASQKQTRAMSRLLTRIEITSPLLKKKSMTWLLRGYIK 431
+ +MK+ G + Y +L + + + L+T ++ + K MT LL+ YIK
Sbjct: 296 IQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIK 354
Query: 432 GSHFHDAAETLVKMVSLGFLPEYLDRVAVLQGLRK 467
G F + E L ++ S G+ + ++ GL K
Sbjct: 356 GGLFDRSRELLSELESAGYAENEMPYCMLMDGLSK 354
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038901728.1 | 2.9e-263 | 89.02 | pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Benincasa ... | [more] |
KAG7010495.1 | 6.7e-260 | 88.63 | Pentatricopeptide repeat-containing protein, chloroplastic [Cucurbita argyrosper... | [more] |
XP_023512972.1 | 1.9e-259 | 88.63 | pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Cucurbita ... | [more] |
XP_022944005.1 | 1.9e-259 | 88.63 | pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Cucurbita ... | [more] |
KAG6570645.1 | 2.5e-259 | 88.43 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
Q0WNN7 | 5.7e-169 | 61.71 | Pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Arabidop... | [more] |
Q0WVV0 | 1.8e-05 | 20.93 | Pentatricopeptide repeat-containing protein At1g10910, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FYE9 | 9.4e-260 | 88.63 | pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Cucurbit... | [more] |
A0A6J1JH85 | 8.8e-258 | 87.65 | pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Cucurbit... | [more] |
A0A6J1D3T2 | 8.8e-258 | 87.87 | pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Momordic... | [more] |
A0A0A0KC35 | 6.1e-251 | 85.88 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G182120 PE=4 SV=1 | [more] |
A0A1S3CNE0 | 4.0e-250 | 85.69 | pentatricopeptide repeat-containing protein At2g30100, chloroplastic OS=Cucumis ... | [more] |
Match Name | E-value | Identity | Description | |
AT2G30100.1 | 4.0e-170 | 61.71 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT1G10910.1 | 1.3e-06 | 20.93 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |