Sed0019538 (gene) Chayote v1

Overview
NameSed0019538
Typegene
OrganismSechium edule (Chayote v1)
Descriptionmajor pollen allergen Lol p 11-like
LocationLG13: 7073412 .. 7075456 (-)
RNA-Seq ExpressionSed0019538
SyntenySed0019538
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCTGCTCCTAAACTTTTATGTCTATTGATTGGCATTTCTTTCGTGGTTGCGGCGACCGCCGTCGTCTCGGACGAGCCTGACTTACCTTTCGTCGTCAATGGCTACGTCTACTGCGACACTTGCCGCTGTGGCTTCGAGACCAACGCCTCCATCCCCATCTCTGGTATGTCCATGGTTCCTTCTCCATTCCCATTTCACATACTGGTTCTTGAAATTAGAGTTATAGCTTACTTGAGTTTGAGTCATAAATTTCACCGTTTTTGAAAATTAAGCATGTTTTACACTATTATTTCTTTTTGTTATCAAACGATTTAATTATTTTTTTAAAGATGAATTTGTATCTTGCTTGATGATTATTTCGTTTCTAAAATTAAGCAGATGAATTATTGTTTAATTATTTTTTAATGTTCTTTTAACTTTGAGTTTGTTTAGTTATATACTTTTTACATAAATTTTCAAAATTTATGCTAAGTTTTGAAAACTAAACAAAAATAATAAATTTGAAACTCTTCGGAGTGAAATGGTTAGAAAATATGTACAAATTTCAATACACATTTATGCTTTAATATCTTTTTTTTTTTTTGAAGAAAACCGACAGATATTTCTTTAGCTTGCGAGATTCCTTTATCATTTTTTTTAAACCAATTTAGTGAAGTTTTGAAAACTAAAAGATTAGGTTCAAGAATAAGAAATCATGTATTATTGTAGTAGTGTAAACACTTAGAAAAGTACATTAAAAAAAAACACTTTGAAAACTATGCTTAAATTGGTTTTGCTATAACTTCTGTTTCCGACGTTGGATTGACTACCAATTTATTACATTGAGATATGTCGATACATTTTCCCATACATCAATGTTAAGATTAACTTAGTGGGTATTTAAAAGGCACCAAATTTAGGTTTGAGAAAGATTTGGATGGAGTTTAGACGGTAACCAAATCATATGTCACTCTTTTAATGATCATAAATTTCTTTTTTCTTTTTTTAATAATTATTTTTTATTTATAAGAGATTTTTTTTATGGTCTATAAAAAGGTAGCATGTGATTTCTGAACTCCACCCAAATCTTCCTCTTTAGGTTCTAGTGCAAAAGTGCACGTTCATAATCCACTTCCAACTTTATTTTATTAAGATTATTATTATTTTATCTTTTGGTACGAAATTGAATCATTTTTCCATAAAATTTATTAATCAATTACTTAATGTTTGTCGAATAGTATATGAAGCTTCGATTTTATACCATCAAATTTCGGACTACTGAGTTGGTCTAAGACGCCAAATAAAGGTTTTGGTTCGAAAGGGCATCGGCTTAGCCGAGTTGGTAGCGTCACATTAAGATTCTAGTCTGAAATAGTATGGGTTTAAATCCCACTTCACTTAGAGTTTCATAACGAGTATATACAATTTCAAATTTGTATCAATAAAGTTGAGATGGCCGAGTTGGTCTAAGGCGCCAGATTAAGGTTCTGGTCCGAAAGGGCGTGGGTTCAAATCCCACTCTCAACAATTTTCTTTTTATTTTTTTGCAAATAGTATATACAATTTCAAGTTTAAATTTTAGGCACAAAAGTGCTCAATTGAAGGTGATATTGGACTTTTCTTTCTTTCTTTTTTTTTTTTTTTTAAATATTGGATTTTTCTTTTAGTACAAGAATAAAGTTGAGAAATTCCACTAGAAGATACATGGTTAAAAGGTAAAATGAAATGAAACAGGTGCAAAAGTGAGACTAGAGTGCAGAGATAGAGCCAAATGGGTGTTGAAATTCAGAAAAGAAGCCATCACCAACTCTGAAGGAAAATACACCATTGATGTCTATGAAGACCACAAGGATGATAGCTGCAAGGTGGTTCTTGTGAGCAGCCCTCACCCTACCTGCAACCAGCCCGACCACGGCCGAAACAGCGCCACCGTCATCCTCACCAACTACAACGGTCTCACCAACAATGTTCGCTTTGCCAATGCCATGGGGTTCTTAATCGAACGCCCTCTCACTTTTTGCTCCTCACTCCTCAAACAATATCTTGACTTTGACGAGTGA

mRNA sequence

ATGGCTGCTGCTCCTAAACTTTTATGTCTATTGATTGGCATTTCTTTCGTGGTTGCGGCGACCGCCGTCGTCTCGGACGAGCCTGACTTACCTTTCGTCGTCAATGGCTACGTCTACTGCGACACTTGCCGCTGTGGCTTCGAGACCAACGCCTCCATCCCCATCTCTGGTGCAAAAGTGAGACTAGAGTGCAGAGATAGAGCCAAATGGGTGTTGAAATTCAGAAAAGAAGCCATCACCAACTCTGAAGGAAAATACACCATTGATGTCTATGAAGACCACAAGGATGATAGCTGCAAGGTGGTTCTTGTGAGCAGCCCTCACCCTACCTGCAACCAGCCCGACCACGGCCGAAACAGCGCCACCGTCATCCTCACCAACTACAACGGTCTCACCAACAATGTTCGCTTTGCCAATGCCATGGGGTTCTTAATCGAACGCCCTCTCACTTTTTGCTCCTCACTCCTCAAACAATATCTTGACTTTGACGAGTGA

Coding sequence (CDS)

ATGGCTGCTGCTCCTAAACTTTTATGTCTATTGATTGGCATTTCTTTCGTGGTTGCGGCGACCGCCGTCGTCTCGGACGAGCCTGACTTACCTTTCGTCGTCAATGGCTACGTCTACTGCGACACTTGCCGCTGTGGCTTCGAGACCAACGCCTCCATCCCCATCTCTGGTGCAAAAGTGAGACTAGAGTGCAGAGATAGAGCCAAATGGGTGTTGAAATTCAGAAAAGAAGCCATCACCAACTCTGAAGGAAAATACACCATTGATGTCTATGAAGACCACAAGGATGATAGCTGCAAGGTGGTTCTTGTGAGCAGCCCTCACCCTACCTGCAACCAGCCCGACCACGGCCGAAACAGCGCCACCGTCATCCTCACCAACTACAACGGTCTCACCAACAATGTTCGCTTTGCCAATGCCATGGGGTTCTTAATCGAACGCCCTCTCACTTTTTGCTCCTCACTCCTCAAACAATATCTTGACTTTGACGAGTGA

Protein sequence

MAAAPKLLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVRLECRDRAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSATVILTNYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYLDFDE
Homology
BLAST of Sed0019538 vs. NCBI nr
Match: XP_023525170.1 (protein DOWNSTREAM OF FLC-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 252.7 bits (644), Expect = 2.2e-63
Identity = 125/162 (77.16%), Postives = 137/162 (84.57%), Query Frame = 0

Query: 3   AAPKLLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVRL 62
           AA  L+ +LIG+ FVVAA+A    +   PF+VNG VYCDTCRCGFETNAS PISGA VRL
Sbjct: 2   AAANLVWILIGVCFVVAASAQPLQK---PFIVNGCVYCDTCRCGFETNASTPISGAIVRL 61

Query: 63  ECRDRAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSAT 122
           ECRDRAKWVLKF K+AITNSEGKYTI V  DHKD+SCK+VLVSSPHPTCNQPD GRNSAT
Sbjct: 62  ECRDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSAT 121

Query: 123 VILTNYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYLDFDE 165
           VILTN NGLTNNVR+ANAMGF  +RPL  C SLLKQYLD+DE
Sbjct: 122 VILTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 160

BLAST of Sed0019538 vs. NCBI nr
Match: KAG6600638.1 (Protein DOWNSTREAM OF FLC, partial [Cucurbita argyrosperma subsp. sororia] >KAG7031274.1 Protein DOWNSTREAM OF FLC, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 251.9 bits (642), Expect = 3.8e-63
Identity = 125/163 (76.69%), Postives = 136/163 (83.44%), Query Frame = 0

Query: 2   AAAPKLLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVR 61
           AA   L  +LIG+ FVVAA+A    +   PF+VNG VYCDTCRCGFETNAS PISGA VR
Sbjct: 27  AAVANLFWILIGVCFVVAASAQPLQK---PFIVNGCVYCDTCRCGFETNASTPISGAIVR 86

Query: 62  LECRDRAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSA 121
           LECRDRAKWVLKF K+AITNSEGKYTI V  DHKD+SCK+VLVSSPHPTCNQPD GRNSA
Sbjct: 87  LECRDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSA 146

Query: 122 TVILTNYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYLDFDE 165
           TVILTN NGLTNNVR+ANAMGF  +RPL  C SLLKQYLD+DE
Sbjct: 147 TVILTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 186

BLAST of Sed0019538 vs. NCBI nr
Match: XP_022941733.1 (protein DOWNSTREAM OF FLC-like [Cucurbita moschata])

HSP 1 Score: 251.9 bits (642), Expect = 3.8e-63
Identity = 125/163 (76.69%), Postives = 136/163 (83.44%), Query Frame = 0

Query: 2   AAAPKLLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVR 61
           AA   L  +LIG+ FVVAA+A    +   PF+VNG VYCDTCRCGFETNAS PISGA VR
Sbjct: 3   AAVANLFWILIGVCFVVAASAQPLQK---PFIVNGCVYCDTCRCGFETNASTPISGAIVR 62

Query: 62  LECRDRAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSA 121
           LECRDRAKWVLKF K+AITNSEGKYTI V  DHKD+SCK+VLVSSPHPTCNQPD GRNSA
Sbjct: 63  LECRDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSA 122

Query: 122 TVILTNYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYLDFDE 165
           TVILTN NGLTNNVR+ANAMGF  +RPL  C SLLKQYLD+DE
Sbjct: 123 TVILTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 162

BLAST of Sed0019538 vs. NCBI nr
Match: XP_022983080.1 (major pollen allergen Lol p 11-like [Cucurbita maxima])

HSP 1 Score: 249.6 bits (636), Expect = 1.9e-62
Identity = 124/163 (76.07%), Postives = 135/163 (82.82%), Query Frame = 0

Query: 2   AAAPKLLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVR 61
           AA   L  +LIG+ FVVAA+A    +   PF+VNG VYCDTCRCGFETNAS PISGA VR
Sbjct: 3   AAVANLFWILIGVCFVVAASAQPLQK---PFIVNGCVYCDTCRCGFETNASTPISGAIVR 62

Query: 62  LECRDRAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSA 121
           LECRDR KWVLKF K+AITNSEGKYTI V  DHKD+SCK+VLVSSPHPTCNQPD GRNSA
Sbjct: 63  LECRDRDKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSA 122

Query: 122 TVILTNYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYLDFDE 165
           TVILTN NGLTNNVR+ANAMGF  +RPL  C SLLKQYLD+DE
Sbjct: 123 TVILTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 162

BLAST of Sed0019538 vs. NCBI nr
Match: XP_022136800.1 (protein DOWNSTREAM OF FLC [Momordica charantia])

HSP 1 Score: 243.4 bits (620), Expect = 1.3e-60
Identity = 115/162 (70.99%), Postives = 134/162 (82.72%), Query Frame = 0

Query: 3   AAPKLLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVRL 62
           AA  L+ +LIG+  ++      +     P+VVNG VYCDTCRCGFET+AS P+SGA+VRL
Sbjct: 2   AASNLIPILIGVCVLLLPALAPAQLLQKPYVVNGCVYCDTCRCGFETSASTPVSGARVRL 61

Query: 63  ECRDRAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSAT 122
           ECRDRAKWVL F KEAITNSEGKY+I V EDHKD+SCKVVLVSSPHPTC++PD GRNSAT
Sbjct: 62  ECRDRAKWVLTFSKEAITNSEGKYSIVVTEDHKDESCKVVLVSSPHPTCSEPDRGRNSAT 121

Query: 123 VILTNYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYLDFDE 165
           VILTN NGLTNN+R+ANAMGFL ERPL  C +LLKQYLD+D+
Sbjct: 122 VILTNNNGLTNNIRYANAMGFLTERPLALCPALLKQYLDYDQ 163

BLAST of Sed0019538 vs. ExPASy Swiss-Prot
Match: P33050 (Pollen-specific protein C13 OS=Zea mays OX=4577 GN=MGS1 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.1e-28
Identity = 68/162 (41.98%), Postives = 105/162 (64.81%), Query Frame = 0

Query: 4   APKLLCLLIGISFVVAATAVVSDEPDLP-FVVNGYVYCDTCRCGFETNASIPISGAKVRL 63
           A  +LCL + +S   A      D+P+LP +V+ G VYCDTCR GF TN +  I+GAKVRL
Sbjct: 12  AAVILCLCVVLSCAAA------DDPNLPDYVIQGRVYCDTCRAGFVTNVTEYIAGAKVRL 71

Query: 64  ECRDRAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSAT 123
           EC+      L+   + +T++ G YTI++ + H++D C+VVLV+SP   C++    R+ A 
Sbjct: 72  ECKHFGTGKLERAIDGVTDATGTYTIELKDSHEEDICQVVLVASPRKDCDEVQALRDRAG 131

Query: 124 VILTNYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYLDFDE 165
           V+LT   G+++++R AN +G+  + PL  C++LLKQ LD D+
Sbjct: 132 VLLTRNVGISDSLRPANPLGYFKDVPLPVCAALLKQ-LDSDD 166

BLAST of Sed0019538 vs. ExPASy Swiss-Prot
Match: Q9LX15 (Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=DFC PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-26
Identity = 68/154 (44.16%), Postives = 91/154 (59.09%), Query Frame = 0

Query: 7   LLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVRLECRD 66
           +LC+L+     +AA AV       PF + G VYCDTCR GFET A+  I GA+VR+ C+D
Sbjct: 11  VLCVLV---LPLAAMAV-----GTPFHIEGSVYCDTCRFGFETIATQYIRGARVRIVCKD 70

Query: 67  RAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSATVILT 126
           R     +    A+T  +GKY + V  D +D  C   LV SP   C + D GR++ATVILT
Sbjct: 71  RVTLKSELVGVAVTGPDGKYKVAVRGDRQDQQCLAELVHSPLSRCQEADPGRSTATVILT 130

Query: 127 NYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYL 161
             NG  +   +ANAMGF  + PL  C++L K+YL
Sbjct: 131 RSNGAASTRHYANAMGFFRDEPLRGCAALRKRYL 156

BLAST of Sed0019538 vs. ExPASy Swiss-Prot
Match: Q29W25 (Pollen allergen Cro s 1 OS=Crocus sativus OX=82528 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.5e-25
Identity = 62/152 (40.79%), Postives = 93/152 (61.18%), Query Frame = 0

Query: 10  LLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVRLECRDRAK 69
           LL+G +  V + A V++  +  F V G VYCDTCR  F T  S  + GA V+LECR+   
Sbjct: 9   LLVG-ALCVLSLAGVANAAENHFKVQGMVYCDTCRIQFMTRVSTIMEGATVKLECRNITA 68

Query: 70  WVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDH---GRNSATVILT 129
               F+ EA+T+  G+Y+I V+ D +DD C++ LV SP+  C++  H    + SA V LT
Sbjct: 69  GTQTFKAEAVTDKVGQYSIPVHGDFQDDICEIELVKSPNSECSEVSHDVYAKQSAKVSLT 128

Query: 130 NYNGLTNNVRFANAMGFLIERPLTFCSSLLKQ 159
           + NG  +++R ANA+GF+ + PL  C  +LK+
Sbjct: 129 SNNGEASDIRSANALGFMRKEPLKECPEVLKE 159

BLAST of Sed0019538 vs. ExPASy Swiss-Prot
Match: Q8LGR0 (Pollen allergen Che a 1 OS=Chenopodium album OX=3559 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 9.4e-25
Identity = 62/152 (40.79%), Postives = 92/152 (60.53%), Query Frame = 0

Query: 10  LLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVRLECRDRAK 69
           LL+G +  V + A V++  +  F V G VYCDTCR  F T  S  + GA V+LECR+   
Sbjct: 9   LLVG-ALCVLSLAGVANAAENHFKVQGMVYCDTCRIQFMTRISTIMEGATVKLECRNITA 68

Query: 70  WVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDH---GRNSATVILT 129
               F+ EA+T+  G+Y+I V  D +DD C++ LV SP+  C++  H    + SA V LT
Sbjct: 69  GTQTFKAEAVTDKVGQYSIPVNGDFEDDICEIELVKSPNSECSEVSHDVYAKQSAKVSLT 128

Query: 130 NYNGLTNNVRFANAMGFLIERPLTFCSSLLKQ 159
           + NG  +++R ANA+GF+ + PL  C  +LK+
Sbjct: 129 SNNGEASDIRSANALGFMRKEPLKECPEVLKE 159

BLAST of Sed0019538 vs. ExPASy Swiss-Prot
Match: Q8H6L7 (Pollen allergen Phl p 11 OS=Phleum pratense OX=15957 PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.0e-23
Identity = 54/129 (41.86%), Postives = 78/129 (60.47%), Query Frame = 0

Query: 32  FVVNGYVYCDTCRCGFETNASIPISGAKVRLECRDRAKWVLKFRKEAITNSEGKYTIDVY 91
           FVV G VYCD CR GFETN S  + GA V ++CR       K + EA T+  G Y I++ 
Sbjct: 6   FVVTGRVYCDPCRAGFETNVSHNVQGATVAVDCRPFNGGESKLKAEATTDGLGWYKIEID 65

Query: 92  EDHKDDSCKVVLVSSPHPTCNQPDHGRNSATVILTNYNGL-TNNVRFANAMGFLIERPLT 151
           +DH+++ C+VVL  SP  TC++ +  R+ A V LT+ NG+    +R+AN + F  + PL 
Sbjct: 66  QDHQEEICEVVLAKSPDTTCSEIEEFRDRARVPLTSNNGIKQQGIRYANPIAFFRKEPLK 125

Query: 152 FCSSLLKQY 160
            C  +L+ Y
Sbjct: 126 ECGGILQAY 134

BLAST of Sed0019538 vs. ExPASy TrEMBL
Match: A0A6J1FSY1 (protein DOWNSTREAM OF FLC-like OS=Cucurbita moschata OX=3662 GN=LOC111447011 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.8e-63
Identity = 125/163 (76.69%), Postives = 136/163 (83.44%), Query Frame = 0

Query: 2   AAAPKLLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVR 61
           AA   L  +LIG+ FVVAA+A    +   PF+VNG VYCDTCRCGFETNAS PISGA VR
Sbjct: 3   AAVANLFWILIGVCFVVAASAQPLQK---PFIVNGCVYCDTCRCGFETNASTPISGAIVR 62

Query: 62  LECRDRAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSA 121
           LECRDRAKWVLKF K+AITNSEGKYTI V  DHKD+SCK+VLVSSPHPTCNQPD GRNSA
Sbjct: 63  LECRDRAKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSA 122

Query: 122 TVILTNYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYLDFDE 165
           TVILTN NGLTNNVR+ANAMGF  +RPL  C SLLKQYLD+DE
Sbjct: 123 TVILTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 162

BLAST of Sed0019538 vs. ExPASy TrEMBL
Match: A0A6J1J4Q1 (major pollen allergen Lol p 11-like OS=Cucurbita maxima OX=3661 GN=LOC111481731 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 9.0e-63
Identity = 124/163 (76.07%), Postives = 135/163 (82.82%), Query Frame = 0

Query: 2   AAAPKLLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVR 61
           AA   L  +LIG+ FVVAA+A    +   PF+VNG VYCDTCRCGFETNAS PISGA VR
Sbjct: 3   AAVANLFWILIGVCFVVAASAQPLQK---PFIVNGCVYCDTCRCGFETNASTPISGAIVR 62

Query: 62  LECRDRAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSA 121
           LECRDR KWVLKF K+AITNSEGKYTI V  DHKD+SCK+VLVSSPHPTCNQPD GRNSA
Sbjct: 63  LECRDRDKWVLKFSKKAITNSEGKYTIPVSYDHKDESCKMVLVSSPHPTCNQPDLGRNSA 122

Query: 122 TVILTNYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYLDFDE 165
           TVILTN NGLTNNVR+ANAMGF  +RPL  C SLLKQYLD+DE
Sbjct: 123 TVILTNNNGLTNNVRYANAMGFFTQRPLALCPSLLKQYLDYDE 162

BLAST of Sed0019538 vs. ExPASy TrEMBL
Match: A0A6J1C4Z4 (protein DOWNSTREAM OF FLC OS=Momordica charantia OX=3673 GN=LOC111008410 PE=3 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 6.5e-61
Identity = 115/162 (70.99%), Postives = 134/162 (82.72%), Query Frame = 0

Query: 3   AAPKLLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVRL 62
           AA  L+ +LIG+  ++      +     P+VVNG VYCDTCRCGFET+AS P+SGA+VRL
Sbjct: 2   AASNLIPILIGVCVLLLPALAPAQLLQKPYVVNGCVYCDTCRCGFETSASTPVSGARVRL 61

Query: 63  ECRDRAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSAT 122
           ECRDRAKWVL F KEAITNSEGKY+I V EDHKD+SCKVVLVSSPHPTC++PD GRNSAT
Sbjct: 62  ECRDRAKWVLTFSKEAITNSEGKYSIVVTEDHKDESCKVVLVSSPHPTCSEPDRGRNSAT 121

Query: 123 VILTNYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYLDFDE 165
           VILTN NGLTNN+R+ANAMGFL ERPL  C +LLKQYLD+D+
Sbjct: 122 VILTNNNGLTNNIRYANAMGFLTERPLALCPALLKQYLDYDQ 163

BLAST of Sed0019538 vs. ExPASy TrEMBL
Match: A0A5A7SZE2 (Major pollen allergen Lol p 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G005880 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 8.7e-58
Identity = 116/162 (71.60%), Postives = 129/162 (79.63%), Query Frame = 0

Query: 3   AAPKLLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVRL 62
           A   L  LLIG+ F+V    + +      FVVNG VYCDTCRCGFETN S P+SGAKVRL
Sbjct: 2   ATSNLFKLLIGVCFLVLLHGLPASAQ--LFVVNGCVYCDTCRCGFETNVSTPVSGAKVRL 61

Query: 63  ECRDRAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSAT 122
           ECRDRA WVLKF KEA TNS+GKY IDVYEDHKD+SCKVVLVSSPH  C++PD GRNSAT
Sbjct: 62  ECRDRATWVLKFTKEATTNSKGKYKIDVYEDHKDESCKVVLVSSPHRGCDRPDIGRNSAT 121

Query: 123 VILTNYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYLDFDE 165
           VILTN NGLT+  R+ANAMGFLI RPL FC ++LKQYLDFDE
Sbjct: 122 VILTNNNGLTSISRYANAMGFLIRRPLAFCPTILKQYLDFDE 161

BLAST of Sed0019538 vs. ExPASy TrEMBL
Match: A0A1S3BYB8 (major pollen allergen Lol p 11-like OS=Cucumis melo OX=3656 GN=LOC103494419 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 8.7e-58
Identity = 116/162 (71.60%), Postives = 129/162 (79.63%), Query Frame = 0

Query: 3   AAPKLLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVRL 62
           A   L  LLIG+ F+V    + +      FVVNG VYCDTCRCGFETN S P+SGAKVRL
Sbjct: 2   ATSNLFKLLIGVCFLVLLHGLPASAQ--LFVVNGCVYCDTCRCGFETNVSTPVSGAKVRL 61

Query: 63  ECRDRAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSAT 122
           ECRDRA WVLKF KEA TNS+GKY IDVYEDHKD+SCKVVLVSSPH  C++PD GRNSAT
Sbjct: 62  ECRDRATWVLKFTKEATTNSKGKYKIDVYEDHKDESCKVVLVSSPHRGCDRPDIGRNSAT 121

Query: 123 VILTNYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYLDFDE 165
           VILTN NGLT+  R+ANAMGFLI RPL FC ++LKQYLDFDE
Sbjct: 122 VILTNNNGLTSISRYANAMGFLIRRPLAFCPTILKQYLDFDE 161

BLAST of Sed0019538 vs. TAIR 10
Match: AT4G08685.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.7e-29
Identity = 68/155 (43.87%), Postives = 92/155 (59.35%), Query Frame = 0

Query: 10  LLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVRLECRDRAK 69
           LL+ + F + A A+ +     PFVV G VYCDTC  GFET AS  ISGA VRLEC+DR  
Sbjct: 6   LLVALCF-LPALAIAARPNKNPFVVRGRVYCDTCLAGFETPASTYISGAVVRLECKDRRT 65

Query: 70  WVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSATVILTNYN 129
             L +  EA T+S G Y I V EDH +  C  +LV S    C+    G + A V LT +N
Sbjct: 66  MELTYSHEARTDSTGSYKILVNEDHDEQFCDAMLVRSSQLRCSNVSPGHDRARVTLTRFN 125

Query: 130 GLTNNVRFANAMGFLIERPLTFCSSLLKQYLDFDE 165
           G+ ++ RFAN MGFL +  +  C+ ++K Y + ++
Sbjct: 126 GIASDDRFANNMGFLRDAAMPGCADIMKLYQETED 159

BLAST of Sed0019538 vs. TAIR 10
Match: AT5G10130.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 121.3 bits (303), Expect = 7.1e-28
Identity = 68/154 (44.16%), Postives = 91/154 (59.09%), Query Frame = 0

Query: 7   LLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVRLECRD 66
           +LC+L+     +AA AV       PF + G VYCDTCR GFET A+  I GA+VR+ C+D
Sbjct: 11  VLCVLV---LPLAAMAV-----GTPFHIEGSVYCDTCRFGFETIATQYIRGARVRIVCKD 70

Query: 67  RAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSATVILT 126
           R     +    A+T  +GKY + V  D +D  C   LV SP   C + D GR++ATVILT
Sbjct: 71  RVTLKSELVGVAVTGPDGKYKVAVRGDRQDQQCLAELVHSPLSRCQEADPGRSTATVILT 130

Query: 127 NYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYL 161
             NG  +   +ANAMGF  + PL  C++L K+YL
Sbjct: 131 RSNGAASTRHYANAMGFFRDEPLRGCAALRKRYL 156

BLAST of Sed0019538 vs. TAIR 10
Match: AT1G78040.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 110.9 bits (276), Expect = 9.6e-25
Identity = 62/160 (38.75%), Postives = 92/160 (57.50%), Query Frame = 0

Query: 7   LLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFET-NASIPISGAKVRLECR 66
           +LC+L  I+       +  +      VV G  YCD C+ GFET  +S  I GA V+L C+
Sbjct: 9   VLCILPAIAMAARRGNIGKN----TMVVQGSTYCDICKFGFETPESSYFIPGATVKLSCK 68

Query: 67  DRAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSATVIL 126
           DR      +  +A+++ EGKY   V++DH+D  C V+LV S   TC++   GR  + VIL
Sbjct: 69  DRKTMEEVYTDKAVSDKEGKYKFIVHDDHRDQMCDVLLVKSSDKTCSKISVGREKSRVIL 128

Query: 127 TNYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYL-DFDE 165
            +Y+G+ + +R AN MGF  E    FCS+L ++Y+ D DE
Sbjct: 129 NHYSGIASQIRHANNMGFEKEVSDVFCSALFQKYMVDEDE 164

BLAST of Sed0019538 vs. TAIR 10
Match: AT1G78040.2 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 110.9 bits (276), Expect = 9.6e-25
Identity = 62/160 (38.75%), Postives = 92/160 (57.50%), Query Frame = 0

Query: 7   LLCLLIGISFVVAATAVVSDEPDLPFVVNGYVYCDTCRCGFET-NASIPISGAKVRLECR 66
           +LC+L  I+       +  +      VV G  YCD C+ GFET  +S  I GA V+L C+
Sbjct: 9   VLCILPAIAMAARRGNIGKN----TMVVQGSTYCDICKFGFETPESSYFIPGATVKLSCK 68

Query: 67  DRAKWVLKFRKEAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTCNQPDHGRNSATVIL 126
           DR      +  +A+++ EGKY   V++DH+D  C V+LV S   TC++   GR  + VIL
Sbjct: 69  DRKTMEEVYTDKAVSDKEGKYKFIVHDDHRDQMCDVLLVKSSDKTCSKISVGREKSRVIL 128

Query: 127 TNYNGLTNNVRFANAMGFLIERPLTFCSSLLKQYL-DFDE 165
            +Y+G+ + +R AN MGF  E    FCS+L ++Y+ D DE
Sbjct: 129 NHYSGIASQIRHANNMGFEKEVSDVFCSALFQKYMVDEDE 164

BLAST of Sed0019538 vs. TAIR 10
Match: AT1G29140.1 (Pollen Ole e 1 allergen and extensin family protein )

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23
Identity = 57/146 (39.04%), Postives = 87/146 (59.59%), Query Frame = 0

Query: 17  VVAATAVVSDEPDLPFVVNGYVYCDTCRCGFETNASIPISGAKVRLECRDRAKWVLKFRK 76
           +V  TA  +D+ D  F + G VYCDTCR  F T  S  + GAKV+LEC+ R    +   K
Sbjct: 18  LVHFTAADADDFD-KFHIKGSVYCDTCRVQFITRISKFLEGAKVKLECKGRENQTVTLTK 77

Query: 77  EAITNSEGKYTIDVYEDHKDDSCKVVLVSSPHPTC---NQPDHGRNSATVILTNYNGL-T 136
           EA+T++ G Y ++V  DH+++ C++VL+ SP P C   N  +  RN+A + LT  +G+ +
Sbjct: 78  EAVTDNAGNYQMEVMGDHEEEVCEIVLLQSPDPECGDVNNQEFLRNAARISLTANDGIVS 137

Query: 137 NNVRFANAMGFLIERPLTFCSSLLKQ 159
           N  R  N +GF+ + PL  C  + K+
Sbjct: 138 NETRTINPLGFMRKTPLAECPQVFKE 162

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023525170.12.2e-6377.16protein DOWNSTREAM OF FLC-like isoform X2 [Cucurbita pepo subsp. pepo][more]
KAG6600638.13.8e-6376.69Protein DOWNSTREAM OF FLC, partial [Cucurbita argyrosperma subsp. sororia] >KAG7... [more]
XP_022941733.13.8e-6376.69protein DOWNSTREAM OF FLC-like [Cucurbita moschata][more]
XP_022983080.11.9e-6276.07major pollen allergen Lol p 11-like [Cucurbita maxima][more]
XP_022136800.11.3e-6070.99protein DOWNSTREAM OF FLC [Momordica charantia][more]
Match NameE-valueIdentityDescription
P330503.1e-2841.98Pollen-specific protein C13 OS=Zea mays OX=4577 GN=MGS1 PE=2 SV=1[more]
Q9LX151.0e-2644.16Protein DOWNSTREAM OF FLC OS=Arabidopsis thaliana OX=3702 GN=DFC PE=2 SV=1[more]
Q29W252.5e-2540.79Pollen allergen Cro s 1 OS=Crocus sativus OX=82528 PE=1 SV=1[more]
Q8LGR09.4e-2540.79Pollen allergen Che a 1 OS=Chenopodium album OX=3559 PE=1 SV=1[more]
Q8H6L74.0e-2341.86Pollen allergen Phl p 11 OS=Phleum pratense OX=15957 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A6J1FSY11.8e-6376.69protein DOWNSTREAM OF FLC-like OS=Cucurbita moschata OX=3662 GN=LOC111447011 PE=... [more]
A0A6J1J4Q19.0e-6376.07major pollen allergen Lol p 11-like OS=Cucurbita maxima OX=3661 GN=LOC111481731 ... [more]
A0A6J1C4Z46.5e-6170.99protein DOWNSTREAM OF FLC OS=Momordica charantia OX=3673 GN=LOC111008410 PE=3 SV... [more]
A0A5A7SZE28.7e-5871.60Major pollen allergen Lol p 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A1S3BYB88.7e-5871.60major pollen allergen Lol p 11-like OS=Cucumis melo OX=3656 GN=LOC103494419 PE=3... [more]
Match NameE-valueIdentityDescription
AT4G08685.11.7e-2943.87Pollen Ole e 1 allergen and extensin family protein [more]
AT5G10130.17.1e-2844.16Pollen Ole e 1 allergen and extensin family protein [more]
AT1G78040.19.6e-2538.75Pollen Ole e 1 allergen and extensin family protein [more]
AT1G78040.29.6e-2538.75Pollen Ole e 1 allergen and extensin family protein [more]
AT1G29140.11.4e-2339.04Pollen Ole e 1 allergen and extensin family protein [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF01190Pollen_Ole_e_1coord: 34..119
e-value: 1.0E-18
score: 67.5
NoneNo IPR availablePANTHERPTHR31614:SF5ALLERGEN-LIKE PROTEIN BRSN20coord: 9..163
IPR006041Pollen allergen Ole e 1 familyPANTHERPTHR31614PROTEIN DOWNSTREAM OF FLC-RELATEDcoord: 9..163

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0019538.1Sed0019538.1mRNA