Sed0019428 (gene) Chayote v1

Overview
NameSed0019428
Typegene
OrganismSechium edule (Chayote v1)
Description54S ribosomal protein L37, mitochondrial-like
LocationLG06: 4043828 .. 4048014 (-)
RNA-Seq ExpressionSed0019428
SyntenySed0019428
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAATGAAAATGGAAAAAAAAAAAAAAAAAAGGGGGAAAAAGGAGTTGTGAGCCGAAACCCTAACAGGCACATCATTTTCCTTTTCTGCCATTGCCGAACTTTTGACGCTCCATTCTCAGTCTCAAACTACAGGTATCTTCATCGTCGTCATCTTTTTCCTTTCTCTAATCTAACTGTGTTGATTTCGTTATCATGTTTAGAATCGAAGTTTTTTCTCCACAAACATGGATTATCCTCTTTCTGAAATGTTATGTATTTTTCTTTCAAATTATGCATTGAATCCCAATTTTCCTCGTGTAATGAATCAATCGCTATGTGAAATTAGCACATTATTTGCTAATTTGGGTTAATTTTGAAATTTTGTTTTGGCTCTGGGAATTGGTTTAAGATTCAACGTGGTTTGATTTCCCTAATTTTAGTCGCCTGTAGACTCCAAAAGCTTGAGTTTGTTAAGCCAGACCAGATATTCTTAGCACTTAGGATATTTGTTTGATTTACCAGGTTAAACTTGTAGAATATGATATAAAAGAAGGGTAGTGTCATGTTTTAAAAGGCTATTGAGGATTACGCCTTGAGGCTCGCCTCGAGGAAAGGCTCTAACTTTTAGCCTCGAGTCTTACGCCTTTGTTGGATCATAAGAGGCCTACGCCTCACACCAGAGAAGCTTACACCTCGATGATTGCGCCCTGAGGCTTAAAATCATTATGCCTCATAGAATAACTAGACGAATAGTGTTAATAGTTTACTTGCTTATAATATAAAGGTTTGAACCAATATAGATTTTCTCTATGGATTCTTATGTTAGAAAGACACAACTGTTTCAGAATTGTAATTTAATTTTATCATTTGTTGGCTTATTTTCCCCTATCATGTCCTTTTAGAGTTCTTTGTTGTTTTCACTATAGGTGCTTGGAGAATTCACTTATATTTCTCCAAACAAATTCAATAACTATTAGTGTTGGTGTTATGTTTTATGTATTTTTGCATAAGTATTATATTTTACCATACATGTTCACACAAGCTTAGATTTTTTATAATATTTTTAATTAAAATTGATGCTTACACTTCATACCGCCTCAAGACTTACACCTCGCCTTTTCAAGAGAAAAAGCCTTGAGGCCGCCTTTAGCCTTTTAAAACGTTGGGTAGTGTTTCAGAAATTTTGAACCTTGGATCTCTTCTTGTTATACTTGTTGATGCAGGGGTTTTATAGTTAAATCAATCTAATTTGTTAAGGTCTCGTTTGGTAACCATTTTTTTGTTTTGTTTTTTTTAGTTGTCGATAATTTAGCTTACTACAGCTACTCCAATCTCTGACTTTCCTTACATTGATATCCTTGTTTTACCTATTTTTTAAAAACCAGCCTAAATTTGAAACCTAAAAAATAACTTCAAAACACTTGATTTGGTTGGTAAGGTAGCTTGCTTCTTTCCTCTCCCTAACGGTCGAGTTGCTATTTGGGAGAAATATGAAATCCTTTGTAGAGATTTTGAATGAAAACAAGCTTAAACTACAAACAAGAAACTAAGGTCCAATTTGATAACCATTTAACCTCGTTTGATAACCATTGTGATTTTAATTTTTGGTTTTTGAGATTTAAGCCTACAACAACTACTTTATCATATAGTTTTTCTTACTTGGATGCCTACATCTTACCTATATTTTTAGAAACCAAACCAAAATTTGAAAACAAAAAAAAGTAGCTTCCAAAAACTTGTTTTTGTTTTTGAAATTTGTTTGACATTCACATACTTTCTCAAGGAGAGATGGATACATCGTAGGAAAGATGGAACACATTGTGGGAAATATGAGTAAAAATAAGTTTAAATTTTAAAAACCAAAAACAAAAAACTAAATAGTCATCAAACGAGGTCTTAGTTTTGTGTTTTTTTTTTTTGAAATTTAAATTTATGACTACTACTCTAACGTACGGTTTTCATCACTTTGATATCTACTCATGTTTTTAAAAACCAAACCAAAATTTGAAAACCAAAAAAGTAGTTTCCAAATACTTAGTTTTTGTTTTTGGAATTTTGTTAGTATCCCCATACTTCATTAAGGAAAGATGAAACAATTATGTAGAGAATTTGAGTAAATACAAACTTAAATTTCAACAACCCAAAAAGTAAAAACAAATAGTTATCAAACGAGGCTAAATGGTGTCAAACGGATCTAAACTATCAGTTGAAGGCTAATCTATTTTTAGTTAGTTGTAAGTTGTTAGTACTAGTAGAAATAGTATTTCATCTGTAAACAAGAAGATCCTGAATAATAAAAGATATGTTTACTGTTTATTTGCATTACTTTCATTAACTGTTTAATTAGGAATTTCAGCACCTAACACGTCATAGAAGTTAGTTCATCAGAATTAATCAATATGTCTATTTCATGATAATACATTTGCTACAGAATTCTAAAATGGCTATGAGTCAAATTAGATTGTTTAGAAGAAGCCTTGTGAATACCAAAGATCTAATAAAACTGACAACTGTGCGAACATTTGCTGCTGGAGGCAAAAAGAAGGGCTCTAAAGGGGGTGCAGCTGCTGATGGTCCTAAAGCATCAATCCTAAGTAAAGAGGTCAAGTCGACAACTGTAGTTGGTGCCAATGCTCTCAAGGAAGGTGCAGATCCAAAAATCATGGCGGACTCCGAGTACCCTGACTGGCTGTGGCGTTTGATCGATAAACATCCACCTCTGAGTGAACTACGAAGGAAGAGTGTCGAAACCCTTCCCTATGATGATCTCAGACGCTTTGTTAAATTGGATACTCGAGCAAAGATTAAGGAAAACAACTCGATGAAGGCGAAGAATTGATGTAAGAATCTAGCTGAGGCTCTATTATTGCTGCTTTTGTTAATTTAATGCATATCATTATTTCCTATAGTCATATGGTTAAGGTGTTTGGCCTAAGGACGGGCGTGGTTATCTTATGTCAAAAAAATATATAGTCATATGGTTAATGTTAAATTACAAATTTAGTCTTTTGGGTTGGAGAATTTCGAACTTGTAATCTTGATTACTAAGTCGTACAAGATGTCACTGCAGTTTTGCTCTTTTTGGTTCATAAATTTTTTGCCTTGATAGGCTCTAGTATATTCAACAATTTTTTTTTTTAAATTAATGAATTTATTTGAAGTAAAATTTATTGTTGTCTAATAAGACTTTAAGACTCTAAACTTTCAATGTTGTATACAATAGATTTGTGAATTTAAAAAATGTCCAATAAGTGAAGGACTTTTGAAAGTTTAGACATTGAAAGTTTAGAAATTTATTTGGATTTTTTTTTTAAAAGTTCTACCCAAACCTAAAATTCAATTCATCATGAAGTGACCTAGAGGTCAAAGAGGGTCTTGAGAAGTTAAGAAGTGGTGAGTTTAATCTATGGTGATCACTTACCTGAGAATTAATTTTCTAGTTTCTTTGATATCAAAATATTGTAGGAACAACTGTGACATAAGTCGAGGTACATGGAAGTTGATAAGATAGTCACTAATATATATAAAAAAATTTTAAAAAAAGGCTAACTTTTAATTTAACCTATGGTTAACTTCAGTCTACTTTTGGTGGACTTGGACTTGGACTTGGACTTGATCCTTGAACACTAGATTATTTATATATACATGGCATGTAATCATGATAAGGAGATGTAGACTATGGAACGATAATTGATATCAATTACTAACAAGTCTCGTATGTGATCTGTCTTGCTATCACCTTTTCTCATTTTTCATCACTGCTATCTTCAAAGTCCAATTTGATGTCTACTTTCTGTTAGTTTCTACAAGCAATCAAGCATTTCAAACCCGACCAGCACGGCGCGAGTTGATAGAATTGTGATAAACACTAACCATTATTGTTACAAACTTTTCTTTTTGCAGAAAATAAGAGAATTAGAATCAAGTCAAATCTCCATATTGAAGGAAGAACAAGCAAAAGCTTACAACAGGGGCATGACATTTCAGGTCTGTAAGCTATCATCTTATTGTCAAAAAGTGCTGAACTTTTTATTTTACTTCACATTCTTTAGTTGAATAAAAACAAGGAAGATAATGGTTTTTTTTCATAATCAAAACCTTTGAATTATTAAAAAAAAAATGAATGTGTACGGAATATTTTCATTATCCACTATGATTTTATATTCCACTTTTATAATACAAATGAAATATTCAACTTGGTTAGGT

mRNA sequence

CAAAATGAAAATGGAAAAAAAAAAAAAAAAAAGGGGGAAAAAGGAGTTGTGAGCCGAAACCCTAACAGGCACATCATTTTCCTTTTCTGCCATTGCCGAACTTTTGACGCTCCATTCTCAGTCTCAAACTACAGAATTCTAAAATGGCTATGAGTCAAATTAGATTGTTTAGAAGAAGCCTTGTGAATACCAAAGATCTAATAAAACTGACAACTGTGCGAACATTTGCTGCTGGAGGCAAAAAGAAGGGCTCTAAAGGGGGTGCAGCTGCTGATGGTCCTAAAGCATCAATCCTAAGTAAAGAGGTCAAGTCGACAACTGTAGTTGGTGCCAATGCTCTCAAGGAAGGTGCAGATCCAAAAATCATGGCGGACTCCGAGTACCCTGACTGGCTGTGGCGTTTGATCGATAAACATCCACCTCTGAGTGAACTACGAAGGAAGAGTGTCGAAACCCTTCCCTATGATGATCTCAGACGCTTTGTTAAATTGGATACTCGAGCAAAGATTAAGGAAAACAACTCGATGAAGGCGAAGAATTGATAAAATAAGAGAATTAGAATCAAGTCAAATCTCCATATTGAAGGAAGAACAAGCAAAAGCTTACAACAGGGGCATGACATTTCAGGTCTGTAAGCTATCATCTTATTGTCAAAAAGTGCTGAACTTTTTATTTTACTTCACATTCTTTAGTTGAATAAAAACAAGGAAGATAATGGTTTTTTTTCATAATCAAAACCTTTGAATTATTAAAAAAAAAATGAATGTGTACGGAATATTTTCATTATCCACTATGATTTTATATTCCACTTTTATAATACAAATGAAATATTCAACTTGGTTAGGT

Coding sequence (CDS)

ATGGCTATGAGTCAAATTAGATTGTTTAGAAGAAGCCTTGTGAATACCAAAGATCTAATAAAACTGACAACTGTGCGAACATTTGCTGCTGGAGGCAAAAAGAAGGGCTCTAAAGGGGGTGCAGCTGCTGATGGTCCTAAAGCATCAATCCTAAGTAAAGAGGTCAAGTCGACAACTGTAGTTGGTGCCAATGCTCTCAAGGAAGGTGCAGATCCAAAAATCATGGCGGACTCCGAGTACCCTGACTGGCTGTGGCGTTTGATCGATAAACATCCACCTCTGAGTGAACTACGAAGGAAGAGTGTCGAAACCCTTCCCTATGATGATCTCAGACGCTTTGTTAAATTGGATACTCGAGCAAAGATTAAGGAAAACAACTCGATGAAGGCGAAGAATTGA

Protein sequence

MAMSQIRLFRRSLVNTKDLIKLTTVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSTTVVGANALKEGADPKIMADSEYPDWLWRLIDKHPPLSELRRKSVETLPYDDLRRFVKLDTRAKIKENNSMKAKN
Homology
[Close]
BLAST of Sed0019428 vs. NCBI nr
Match: XP_022989738.1 (54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima] >XP_022989739.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 228.8 bits (582), Expect = 2.7e-56
Identity = 117/132 (88.64%), Postives = 123/132 (93.18%), Query Frame = 0 

Query: 1   MAMSQIRLFRRSLVNTKDLIKLTTVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSTTV 60
           MAMSQIRLFRRSL+NTKDLIKLT VRTFAAGGKKKGSKGGAA D PKASILSKEVKSTTV
Sbjct: 1   MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSKGGAATDAPKASILSKEVKSTTV 60

Query: 61  VGANALKEGADPKIMADSEYPDWLWRLIDKHPPLSELRRKSVETLPYDDLRRFVKLDTRA 120
           VGAN LKEGADPK+MADSEYPDWLWRLIDK P LSELRRK  +TLPY+DL+RFVKLDTRA
Sbjct: 61  VGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRKDAKTLPYEDLKRFVKLDTRA 120

Query: 121 KIKENNSMKAKN 133
           +IKENNS KAKN
Sbjct: 121 RIKENNSSKAKN 132

[Close]
BLAST of Sed0019428 vs. NCBI nr
Match: XP_038883607.1 (54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida] >XP_038883608.1 54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida])

HSP 1 Score: 223.0 bits (567), Expect = 1.5e-54
Identity = 117/133 (87.97%), Postives = 124/133 (93.23%), Query Frame = 0 

Query: 1   MAMSQIRLFRRSLVNTKDLIKLTTVRTFAAGGK-KKGSKGGAAADGPKASILSKEVKSTT 60
           M MSQIRLFRRS+VN+KDLI+LT+VRTFAAGGK KKGSKGGAAAD PKAS LSKEVKSTT
Sbjct: 1   MVMSQIRLFRRSIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASTLSKEVKSTT 60

Query: 61  VVGANALKEGADPKIMADSEYPDWLWRLIDKHPPLSELRRKSVETLPYDDLRRFVKLDTR 120
           VVGAN LKEGADPKIMADSEYP WLW L+DKHPPLSELRRK+VETLPY DL+RFVKLDTR
Sbjct: 61  VVGANILKEGADPKIMADSEYPVWLWHLLDKHPPLSELRRKNVETLPYVDLKRFVKLDTR 120

Query: 121 AKIKENNSMKAKN 133
           AKIKENNS KAKN
Sbjct: 121 AKIKENNSTKAKN 133

[Close]
BLAST of Sed0019428 vs. NCBI nr
Match: XP_038883606.1 (39S ribosomal protein L54, mitochondrial isoform X1 [Benincasa hispida])

HSP 1 Score: 223.0 bits (567), Expect = 1.5e-54
Identity = 117/133 (87.97%), Postives = 124/133 (93.23%), Query Frame = 0 

Query: 1   MAMSQIRLFRRSLVNTKDLIKLTTVRTFAAGGK-KKGSKGGAAADGPKASILSKEVKSTT 60
           M MSQIRLFRRS+VN+KDLI+LT+VRTFAAGGK KKGSKGGAAAD PKAS LSKEVKSTT
Sbjct: 9   MVMSQIRLFRRSIVNSKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASTLSKEVKSTT 68

Query: 61  VVGANALKEGADPKIMADSEYPDWLWRLIDKHPPLSELRRKSVETLPYDDLRRFVKLDTR 120
           VVGAN LKEGADPKIMADSEYP WLW L+DKHPPLSELRRK+VETLPY DL+RFVKLDTR
Sbjct: 69  VVGANILKEGADPKIMADSEYPVWLWHLLDKHPPLSELRRKNVETLPYVDLKRFVKLDTR 128

Query: 121 AKIKENNSMKAKN 133
           AKIKENNS KAKN
Sbjct: 129 AKIKENNSTKAKN 141

[Close]
BLAST of Sed0019428 vs. NCBI nr
Match: XP_022154133.1 (54S ribosomal protein L37, mitochondrial-like [Momordica charantia])

HSP 1 Score: 220.3 bits (560), Expect = 9.8e-54
Identity = 113/132 (85.61%), Postives = 123/132 (93.18%), Query Frame = 0 

Query: 1   MAMSQIRLFRRSLVNTKDLIKLTTVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSTTV 60
           MAMSQ RLF RS++N KD IK+T+VRTFAAGGKKKGSKGGAAADGPKASILSKEVKS+TV
Sbjct: 1   MAMSQSRLF-RSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTV 60

Query: 61  VGANALKEGADPKIMADSEYPDWLWRLIDKHPPLSELRRKSVETLPYDDLRRFVKLDTRA 120
           VGAN LKEGADPK+MADSEYPDWLWRLIDKHP LSELRRK+VE LPY+DL+RFVKLD RA
Sbjct: 61  VGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKNVEALPYEDLKRFVKLDNRA 120

Query: 121 KIKENNSMKAKN 133
            IKENNS+KAKN
Sbjct: 121 SIKENNSIKAKN 131

[Close]
BLAST of Sed0019428 vs. NCBI nr
Match: XP_022928329.1 (54S ribosomal protein L37, mitochondrial-like [Cucurbita moschata] >XP_022928331.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53
Identity = 115/133 (86.47%), Postives = 122/133 (91.73%), Query Frame = 0 

Query: 1   MAMSQIRLFRRSLVNTKDLIKLTTVRTFAAGGKKKGSK-GGAAADGPKASILSKEVKSTT 60
           MAMSQIRL RRSL+NTKDLIKLT VRTFAAGGKKKGSK GGAA D PKASILSKEVKSTT
Sbjct: 1   MAMSQIRLVRRSLLNTKDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTT 60

Query: 61  VVGANALKEGADPKIMADSEYPDWLWRLIDKHPPLSELRRKSVETLPYDDLRRFVKLDTR 120
           VVGAN LKEGADPK+MADSEYPDWLWRLIDK P LSEL+RK  +TLPY+DL+RFVKLDTR
Sbjct: 61  VVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELQRKDAKTLPYEDLKRFVKLDTR 120

Query: 121 AKIKENNSMKAKN 133
           A+IKENNS KAKN
Sbjct: 121 ARIKENNSSKAKN 133

[Close]
BLAST of Sed0019428 vs. ExPASy Swiss-Prot
Match: Q9CPW3 (39S ribosomal protein L54, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl54 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-04
Identity = 33/84 (39.29%), Postives = 47/84 (55.95%), Query Frame = 0 

Query: 24  TVRTFAAGGKKKGSKGGAAADGPK-ASILSKEVKSTT-VVGANALKEGADPKIMADSEYP 83
           ++R +A     KG KGG AA+  K   + +   + TT  +G N  KEG D  + ADSEYP
Sbjct: 31  SIREYAKKPVGKGGKGGVAAEALKDPEVCTDPTQLTTHAMGVNIYKEGQDVALKADSEYP 90

Query: 84  DWLWRLIDKHPP--LSELRRKSVE 104
            WL++ ++  PP  L EL  +S E
Sbjct: 91  TWLFQ-VNLGPPKKLEELEPESRE 113

[Close]
BLAST of Sed0019428 vs. ExPASy TrEMBL
Match: A0A6J1JQ61 (54S ribosomal protein L37, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111486735 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 117/132 (88.64%), Postives = 123/132 (93.18%), Query Frame = 0 

Query: 1   MAMSQIRLFRRSLVNTKDLIKLTTVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSTTV 60
           MAMSQIRLFRRSL+NTKDLIKLT VRTFAAGGKKKGSKGGAA D PKASILSKEVKSTTV
Sbjct: 1   MAMSQIRLFRRSLLNTKDLIKLTNVRTFAAGGKKKGSKGGAATDAPKASILSKEVKSTTV 60

Query: 61  VGANALKEGADPKIMADSEYPDWLWRLIDKHPPLSELRRKSVETLPYDDLRRFVKLDTRA 120
           VGAN LKEGADPK+MADSEYPDWLWRLIDK P LSELRRK  +TLPY+DL+RFVKLDTRA
Sbjct: 61  VGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELRRKDAKTLPYEDLKRFVKLDTRA 120

Query: 121 KIKENNSMKAKN 133
           +IKENNS KAKN
Sbjct: 121 RIKENNSSKAKN 132

[Close]
BLAST of Sed0019428 vs. ExPASy TrEMBL
Match: A0A6J1DJG1 (54S ribosomal protein L37, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111021461 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.7e-54
Identity = 113/132 (85.61%), Postives = 123/132 (93.18%), Query Frame = 0 

Query: 1   MAMSQIRLFRRSLVNTKDLIKLTTVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSTTV 60
           MAMSQ RLF RS++N KD IK+T+VRTFAAGGKKKGSKGGAAADGPKASILSKEVKS+TV
Sbjct: 1   MAMSQSRLF-RSIINAKDAIKVTSVRTFAAGGKKKGSKGGAAADGPKASILSKEVKSSTV 60

Query: 61  VGANALKEGADPKIMADSEYPDWLWRLIDKHPPLSELRRKSVETLPYDDLRRFVKLDTRA 120
           VGAN LKEGADPK+MADSEYPDWLWRLIDKHP LSELRRK+VE LPY+DL+RFVKLD RA
Sbjct: 61  VGANILKEGADPKVMADSEYPDWLWRLIDKHPALSELRRKNVEALPYEDLKRFVKLDNRA 120

Query: 121 KIKENNSMKAKN 133
            IKENNS+KAKN
Sbjct: 121 SIKENNSIKAKN 131

[Close]
BLAST of Sed0019428 vs. ExPASy TrEMBL
Match: A0A6J1EKI4 (54S ribosomal protein L37, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111435190 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.2e-54
Identity = 115/133 (86.47%), Postives = 122/133 (91.73%), Query Frame = 0 

Query: 1   MAMSQIRLFRRSLVNTKDLIKLTTVRTFAAGGKKKGSK-GGAAADGPKASILSKEVKSTT 60
           MAMSQIRL RRSL+NTKDLIKLT VRTFAAGGKKKGSK GGAA D PKASILSKEVKSTT
Sbjct: 1   MAMSQIRLVRRSLLNTKDLIKLTNVRTFAAGGKKKGSKGGGAATDAPKASILSKEVKSTT 60

Query: 61  VVGANALKEGADPKIMADSEYPDWLWRLIDKHPPLSELRRKSVETLPYDDLRRFVKLDTR 120
           VVGAN LKEGADPK+MADSEYPDWLWRLIDK P LSEL+RK  +TLPY+DL+RFVKLDTR
Sbjct: 61  VVGANILKEGADPKVMADSEYPDWLWRLIDKRPALSELQRKDAKTLPYEDLKRFVKLDTR 120

Query: 121 AKIKENNSMKAKN 133
           A+IKENNS KAKN
Sbjct: 121 ARIKENNSSKAKN 133

[Close]
BLAST of Sed0019428 vs. ExPASy TrEMBL
Match: A0A5D3CXE8 (39S ribosomal protein L54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00130 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 8.3e-51
Identity = 110/133 (82.71%), Postives = 123/133 (92.48%), Query Frame = 0 

Query: 1   MAMSQIRLFRRS-LVNTKDLIKLTTVRTFAAGGK-KKGSKGGAAADGPKASILSKEVKST 60
           M +SQIR FRR+ +V++KDLI+LT+VR+FAAGGK KKGSKGGAAAD PKASILSKEVKST
Sbjct: 28  MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 87

Query: 61  TVVGANALKEGADPKIMADSEYPDWLWRLIDKHPPLSELRRKSVETLPYDDLRRFVKLDT 120
           TVVGAN LKEGADPKIMADSEYP WLW L+DKHPPLSELRRK+ E+LPY DLRRFVKLDT
Sbjct: 88  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 147

Query: 121 RAKIKENNSMKAK 132
           RA+IKENNS+KAK
Sbjct: 148 RARIKENNSIKAK 160

[Close]
BLAST of Sed0019428 vs. ExPASy TrEMBL
Match: A0A1S3B544 (54S ribosomal protein L37, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486119 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 8.3e-51
Identity = 110/133 (82.71%), Postives = 123/133 (92.48%), Query Frame = 0 

Query: 1   MAMSQIRLFRRS-LVNTKDLIKLTTVRTFAAGGK-KKGSKGGAAADGPKASILSKEVKST 60
           M +SQIR FRR+ +V++KDLI+LT+VR+FAAGGK KKGSKGGAAAD PKASILSKEVKST
Sbjct: 1   MGLSQIRFFRRNIIVSSKDLIQLTSVRSFAAGGKSKKGSKGGAAADAPKASILSKEVKST 60

Query: 61  TVVGANALKEGADPKIMADSEYPDWLWRLIDKHPPLSELRRKSVETLPYDDLRRFVKLDT 120
           TVVGAN LKEGADPKIMADSEYP WLW L+DKHPPLSELRRK+ E+LPY DLRRFVKLDT
Sbjct: 61  TVVGANILKEGADPKIMADSEYPAWLWHLLDKHPPLSELRRKNAESLPYADLRRFVKLDT 120

Query: 121 RAKIKENNSMKAK 132
           RA+IKENNS+KAK
Sbjct: 121 RARIKENNSIKAK 133

[Close]
BLAST of Sed0019428 vs. TAIR 10
Match: AT3G01740.1 (Mitochondrial ribosomal protein L37 )

HSP 1 Score: 168.7 bits (426), Expect = 3.1e-42
Identity = 89/132 (67.42%), Postives = 107/132 (81.06%), Query Frame = 0 

Query: 3   MSQIRLFRRSLVNTKDLIKLTTVRTFAAGGK--KKGSKGGAAADGPKASILSKEVKSTTV 62
           M++I L R S  ++KD+++    RTFAA     KKG KGG A+D PK S L+KE+KSTTV
Sbjct: 1   MNRIGLIRGS--SSKDVVR----RTFAAAASKAKKGGKGGGASDAPKGSSLTKEIKSTTV 60

Query: 63  VGANALKEGADPKIMADSEYPDWLWRLIDKHPPLSELRRKSVETLPYDDLRRFVKLDTRA 122
           VGAN LK+G+DPKI+ DS+YPDWLW L+DK P LSELRRK+VETLPYDDL+RFVKLDTR 
Sbjct: 61  VGANTLKDGSDPKILPDSDYPDWLWHLLDKRPALSELRRKNVETLPYDDLKRFVKLDTRG 120

Query: 123 KIKENNSMKAKN 133
           KIKENNS+KAKN
Sbjct: 121 KIKENNSIKAKN 126

[Close]
BLAST of Sed0019428 vs. TAIR 10
Match: AT5G14290.1 (Mitochondrial ribosomal protein L37 )

HSP 1 Score: 150.2 bits (378), Expect = 1.2e-36
Identity = 79/132 (59.85%), Postives = 102/132 (77.27%), Query Frame = 0 

Query: 3   MSQIRLFRRSLVNTKDLIKLTTVRTF--AAGGKKKGSKGGAAADGPKASILSKEVKSTTV 62
           M+ IR+F  S+  +KD+++    RTF  AAG  KK  +G    D PKAS LSKE+KS+ V
Sbjct: 1   MNLIRMFGDSISRSKDVMRFVCQRTFATAAGKAKKVGRGDGGNDAPKASNLSKEIKSSMV 60

Query: 63  VGANALKEGADPKIMADSEYPDWLWRLIDKHPPLSELRRKSVETLPYDDLRRFVKLDTRA 122
           V AN LK+G DPKI+ +S++PD+LW L+DK P LSELRRK+VETL +DDL+RFVKLDTRA
Sbjct: 61  VSANTLKDGLDPKILPNSDHPDYLWHLLDKRPALSELRRKNVETLSFDDLKRFVKLDTRA 120

Query: 123 KIKENNSMKAKN 133
           +IKEN+S+KAKN
Sbjct: 121 RIKENHSIKAKN 132

The following BLAST results are available for this feature:
BLAST of Sed0019428 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022989738.12.7e-5688.6454S ribosomal protein L37, mitochondrial-like [Cucurbita maxima] >XP_022989739.1... [more]
XP_038883607.11.5e-5487.9754S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida] >XP_0388... [more]
XP_038883606.11.5e-5487.9739S ribosomal protein L54, mitochondrial isoform X1 [Benincasa hispida][more]
XP_022154133.19.8e-5485.6154S ribosomal protein L37, mitochondrial-like [Momordica charantia][more]
XP_022928329.11.3e-5386.4754S ribosomal protein L37, mitochondrial-like [Cucurbita moschata] >XP_022928331... [more]
BLAST of Sed0019428 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9CPW32.5e-0439.2939S ribosomal protein L54, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl54 PE=1... [more]
BLAST of Sed0019428 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JQ611.3e-5688.6454S ribosomal protein L37, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1DJG14.7e-5485.6154S ribosomal protein L37, mitochondrial-like OS=Momordica charantia OX=3673 GN=... [more]
A0A6J1EKI46.2e-5486.4754S ribosomal protein L37, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A5D3CXE88.3e-5182.7139S ribosomal protein L54 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3B5448.3e-5182.7154S ribosomal protein L37, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=L... [more]
BLAST of Sed0019428 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G01740.13.1e-4267.42Mitochondrial ribosomal protein L37 [more]
AT5G14290.11.2e-3659.85Mitochondrial ribosomal protein L37 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013870Ribosomal protein L37, mitochondrialPFAMPF08561Ribosomal_L37coord: 51..91
e-value: 2.2E-12
score: 47.6
IPR013870Ribosomal protein L37, mitochondrialPANTHERPTHR2859539S RIBOSOMAL PROTEIN L54, MITOCHONDRIALcoord: 1..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0019428.1Sed0019428.1mRNA
Sed0019428.2Sed0019428.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005762 mitochondrial large ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome