Sed0019144 (gene) Chayote v1

Overview


Name	Sed0019144
Type	gene
Organism	Sechium edule (Chayote v1)
Description	S-protein homolog
Location	LG04: 2215902 .. 2216333 (+)
RNA-Seq Expression	Sed0019144
Synteny	Sed0019144

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCAATTCCTATTATTATCAATAGGGCTCTTACTCGTCGCATCCCAAGCAACAGGGGCAAGGGAAATAAATCGACCGAATCGATCTCTTATCTTCACTACCAATTTTCGTGTTGAAATTCACAATGAACTAAACATGTTTATATTGGATAGTCATTGCAAATCAAAAGATAACGATTTAGGGTTGCATATACTTCTTCCGGGACAAAGCCAAAGTTGGTCTTTTGGAAGAAACTTTTGGAGAACAACCTTATTCCATTGTTCATTGAAGTGGGAAAAAGGATCTCGACAATTCGATGGATATTATGATCGTTATGAACAAACAGGCGAATGTCCCAAAAATAAGTGTGTTTGGATAGTCAAACAAAATGGGATTTACTATGTGGATAAAGCTGGCCAACATGTTTTTAAGTACCGTTGGAATGTTTAG

mRNA sequence

ATGTATCAATTCCTATTATTATCAATAGGGCTCTTACTCGTCGCATCCCAAGCAACAGGGGCAAGGGAAATAAATCGACCGAATCGATCTCTTATCTTCACTACCAATTTTCGTGTTGAAATTCACAATGAACTAAACATGTTTATATTGGATAGTCATTGCAAATCAAAAGATAACGATTTAGGGTTGCATATACTTCTTCCGGGACAAAGCCAAAGTTGGTCTTTTGGAAGAAACTTTTGGAGAACAACCTTATTCCATTGTTCATTGAAGTGGGAAAAAGGATCTCGACAATTCGATGGATATTATGATCGTTATGAACAAACAGGCGAATGTCCCAAAAATAAGTGTGTTTGGATAGTCAAACAAAATGGGATTTACTATGTGGATAAAGCTGGCCAACATGTTTTTAAGTACCGTTGGAATGTTTAG

Coding sequence (CDS)

ATGTATCAATTCCTATTATTATCAATAGGGCTCTTACTCGTCGCATCCCAAGCAACAGGGGCAAGGGAAATAAATCGACCGAATCGATCTCTTATCTTCACTACCAATTTTCGTGTTGAAATTCACAATGAACTAAACATGTTTATATTGGATAGTCATTGCAAATCAAAAGATAACGATTTAGGGTTGCATATACTTCTTCCGGGACAAAGCCAAAGTTGGTCTTTTGGAAGAAACTTTTGGAGAACAACCTTATTCCATTGTTCATTGAAGTGGGAAAAAGGATCTCGACAATTCGATGGATATTATGATCGTTATGAACAAACAGGCGAATGTCCCAAAAATAAGTGTGTTTGGATAGTCAAACAAAATGGGATTTACTATGTGGATAAAGCTGGCCAACATGTTTTTAAGTACCGTTGGAATGTTTAG

Protein sequence

MYQFLLLSIGLLLVASQATGAREINRPNRSLIFTTNFRVEIHNELNMFILDSHCKSKDNDLGLHILLPGQSQSWSFGRNFWRTTLFHCSLKWEKGSRQFDGYYDRYEQTGECPKNKCVWIVKQNGIYYVDKAGQHVFKYRWNV

Homology

[Close]

BLAST of Sed0019144 vs. NCBI nr
Match: KAG7031483.1 (S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149.4 bits (376), Expect = 2.3e-32
Identity = 76/148 (51.35%), Postives = 97/148 (65.54%), Query Frame = 0


Query: 1   MYQFLLLSIGLLLVAS-QATGARE---INRPNRSLIFTTNFRVEIHNELNMFILDSHCKS 60
           M + +LL +GLLL+ S   TGA E     +  RSL+    F VEI N L M+ILDSHC S
Sbjct: 183 MDRLVLLWLGLLLMMSCPTTGASEEQQQQQQERSLVDIPKFHVEIRNGLKMYILDSHCFS 242

Query: 61  KDNDLGLHILLPGQSQSWSFGRNFWRTTLFHCSLKWEKGSRQFDGYY-DRYEQTGECPKN 120
           KD+DLGLHIL P   QSWSF  NFW  TLFHC L+WE+G ++FD ++ D       C   
Sbjct: 243 KDDDLGLHILFPDDQQSWSFRDNFWGRTLFHCRLEWERGFKEFDAFFVDEVFFDEYCSNF 302

Query: 121 KCVWIVKQNGIYYVDKAGQHVFKYRWNV 144
           +C+WI KQ+GIY ++KAGQ VF +RW +
Sbjct: 303 RCIWIAKQDGIYMLNKAGQEVFYHRWKL 330

[Close]

BLAST of Sed0019144 vs. NCBI nr
Match: KAG6600849.1 (S-protein-like 74, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 145.6 bits (366), Expect = 3.3e-31
Identity = 68/133 (51.13%), Postives = 89/133 (66.92%), Query Frame = 0


Query: 13  LVASQATGA-REINRPNRSLIFTTNFRVEIHNELNMFILDSHCKSKDNDLGLHILLPGQS 72
           +++   TGA +E  +  RSL+    F VEI N L M+ILDSHC SKD+DLGLHIL P   
Sbjct: 1   MMSCPTTGASKEQQQQERSLVDIPKFHVEIRNGLKMYILDSHCFSKDDDLGLHILFPDDQ 60

Query: 73  QSWSFGRNFWRTTLFHCSLKWEKGSRQFDGYY-DRYEQTGECPKNKCVWIVKQNGIYYVD 132
           QSWSF  NFW  TLFHC L+WE+G ++FD ++ D       C   +C+WI KQ+GIY ++
Sbjct: 61  QSWSFRDNFWGRTLFHCRLEWERGFKEFDAFFVDEVFFDEYCSNFRCIWIAKQDGIYMLN 120

Query: 133 KAGQHVFKYRWNV 144
           KAGQ VF +RW +
Sbjct: 121 KAGQEVFYHRWKL 133

[Close]

BLAST of Sed0019144 vs. NCBI nr
Match: XP_023546939.1 (S-protein homolog 74-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144.4 bits (363), Expect = 7.4e-31
Identity = 69/127 (54.33%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 19  TGA-REINRPNRSLIFTTNFRVEIHNELNMFILDSHCKSKDNDLGLHILLPGQSQSWSFG 78
           TGA  E  +  RSLI    FRVEI N L M+ILDSHC SKD+DLGLHIL P   QSWSF 
Sbjct: 2   TGASEEQQQQERSLIDIPKFRVEIRNGLQMYILDSHCFSKDDDLGLHILFPDDQQSWSFR 61

Query: 79  RNFWRTTLFHCSLKWEKGSRQFDGYY-DRYEQTGECPKNKCVWIVKQNGIYYVDKAGQHV 138
            N W  TLFHC L+WE+G ++FD ++ D       C   +C+WI KQ+GIY ++KAGQ V
Sbjct: 62  DNIWGRTLFHCRLEWERGFKEFDAFFVDEVFFDEYCSNFRCIWIAKQDGIYMLNKAGQEV 121

Query: 139 FKYRWNV 144
           F +RW +
Sbjct: 122 FYHRWKL 128

[Close]

BLAST of Sed0019144 vs. NCBI nr
Match: KAE8648167.1 (hypothetical protein Csa_018435 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 6.0e-25
Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 23  EINRPNRSLIFTTNFRVEIHNELNMFILDSHCKSKDNDLGLHILLPGQSQSWSFGRNFWR 82
           +++ PN  ++    F VEIHN+L MFILDSHC SKD+DLGLHIL P + Q WSF  N+  
Sbjct: 34  KLSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDEKQDWSFKGNWIA 93

Query: 83  TTLFHCSLKWEKGSRQFDGYYDRYE-QTGECPKNKCVWIVKQNGIYYVDKAGQHVFKYRW 142
           TT FHC L+WE G  +FD +    +  T  C    C+W  +Q+G+Y  + AG+ VF   W
Sbjct: 94  TTSFHCRLEWEVGYLEFDSFKSAPDFVTNYCGNQTCIWSARQDGVYLNNAAGEQVFYNYW 153

Query: 143 NV 144
            +
Sbjct: 154 EM 155

[Close]

BLAST of Sed0019144 vs. NCBI nr
Match: XP_008453055.1 (PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo])

HSP 1 Score: 122.5 bits (306), Expect = 3.0e-24
Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 0


Query: 14  VASQATGAREINRPNRSLIFTTNFRVEIHNELNMFILDSHCKSKDNDLGLHILLPGQSQS 73
           + SQ TG  E+ +P+  L+    F + I+NEL M++LDSHC SKD+DLG  +L P   QS
Sbjct: 8   IKSQETGP-ELPKPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQS 67

Query: 74  WSFGRNFWRTTLFHCSLKWEKGSRQFDGYYDRYE-QTGECPKNKCVWIVKQNGIYYVDKA 133
           WSF  N+  TT FHC L+WE G  +FD + +  +  T  C K+ C W  +Q+G+Y  ++ 
Sbjct: 68  WSFRGNWLGTTNFHCKLEWENGYLEFDAFSNDVKFLTNFCAKSSCCWSARQDGVYLTNQN 127

Query: 134 GQHVFKYRWNV 144
           GQ VF   W +
Sbjct: 128 GQVVFNQNWEM 137

[Close]

BLAST of Sed0019144 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-19
Identity = 60/152 (39.47%), Postives = 83/152 (54.61%), Query Frame = 0


Query: 3   QFLLLSIGLLLVA---SQATGAREINRPN-----RSLIFTTNFRVEIHNEL-NMFILDSH 62
           Q+L L I ++ +    SQA    +I  PN      S+  T+   VEI+N+L N   L  H
Sbjct: 6   QYLSLFILIIFITTKLSQADHKNDIPVPNDPSSTNSVFPTSKRTVEINNDLGNQLTLLYH 65

Query: 63  CKSKDNDLGLHILLPGQSQSWSFGRNFWRTTLFHCSLKWEKGSRQFDGYYDRYEQTGE-- 122
           CKSKD+DLG   L PG+S S+SFGR F+  TL+ CS  W   S  FD Y D  +  G+  
Sbjct: 66  CKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDSGGDNK 125

Query: 123 CPKNKCVWIVKQNG-IYYVDKAGQHVFKYRWN 143
           C  ++CVW +++NG   + D+  Q    Y WN
Sbjct: 126 CESDRCVWKIRRNGPCRFNDETKQFDLCYPWN 157

[Close]

BLAST of Sed0019144 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-10
Identity = 36/105 (34.29%), Postives = 53/105 (50.48%), Query Frame = 0


Query: 38  RVEIHNELNMFILDSHCKSKDNDLGLHILLPGQSQSWSFGRNFWRTTLFHCSLKWEKGSR 97
           RV I+N+ N ++L  HCKS+D+D G HIL  G    W F  NF  +TL+ C    E+  +
Sbjct: 33  RVVIYND-NDYLLGVHCKSRDDDHGFHILQKGGLYGWMFYVNFMNSTLYFCGFSQEQVKK 92

Query: 98  QFDGYYDRYEQTGECPKNKCVWIVKQNGIY-YVDKAGQHVFKYRW 142
                Y     +  C    C W  K++GIY Y +   ++   Y+W
Sbjct: 93  GVFDIYKAVRDSSRC--RNCTWEAKEDGIYGYGEIPKKNPLFYKW 134

[Close]

BLAST of Sed0019144 vs. ExPASy Swiss-Prot
Match: Q40975 (Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.5e-10
Identity = 30/83 (36.14%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 53  HCKSKDNDLGLHILLPGQSQSWSFGRNFWRTTLFHCSLKWEKGSR-QFDGYYDRYEQTGE 112
           HC+SKDNDL    +  G   S+SF  +F+ TT F+C L+W+K ++  F  Y  + +  G 
Sbjct: 41  HCRSKDNDLQNQTVTSGHDMSFSFREDFFHTTHFYCDLQWDKETKFGFYSYQAKRDDDGR 100

Query: 113 CPKNKCVWIVKQNGIYYVDKAGQ 135
           C  ++C+W +  +G+Y  D+  Q
Sbjct: 101 C-SSQCLWKIMDDGLYGFDQEHQ 122

[Close]

BLAST of Sed0019144 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.4e-10
Identity = 42/139 (30.22%), Postives = 65/139 (46.76%), Query Frame = 0


Query: 4   FLLLSIGLLLVASQATGAREINRPNRSLIFTTNFRVEIHNELNMFILDSHCKSKDNDLGL 63
           F++  + + L+ S+A   +E   P R  +     RV I N+ N ++L  HCKS+D+DLG 
Sbjct: 17  FIVSIVVISLICSEALQIQEAKEPIRGHL----TRVTIQND-NDYLLGIHCKSRDDDLGF 76

Query: 64  HILLPGQSQSWSFGRNFWRTTLFHCSLKWEKGSRQFDGYYDRYEQTGECPKNKCVWIVKQ 123
           HIL  G+   W F  NF  +TL+ C     +  +     Y        C    C W  ++
Sbjct: 77  HILAKGELFGWKFHVNFCYSTLYFCGFSQGQMKKGVFEIYRANRDFYRCA--NCTWKAEK 136

Query: 124 NGIY-YVDKAGQHVFKYRW 142
           +GIY Y +   +    Y W
Sbjct: 137 DGIYGYSEDPVKGYLFYNW 148

[Close]

BLAST of Sed0019144 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.4e-10
Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 50  LDSHCKSKDNDLGLHILLPGQSQSWSFGRNFWRTTLFHCSLKWEKGSRQFDGYYDRYEQT 109
           L  HCKSK +DLG+H++   Q   + F  N W++TLF CS +W+   + FD  YD     
Sbjct: 42  LTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKSFD-IYDAQRDQ 101

Query: 110 GECPKNKCVWIVKQNG 126
           G C  + C W +K +G
Sbjct: 102 GIC--DDCQWEIKPDG 114

[Close]

BLAST of Sed0019144 vs. ExPASy TrEMBL
Match: A0A0A0KL79 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.9e-25
Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 0


Query: 23  EINRPNRSLIFTTNFRVEIHNELNMFILDSHCKSKDNDLGLHILLPGQSQSWSFGRNFWR 82
           +++ PN  ++    F VEIHN+L MFILDSHC SKD+DLGLHIL P + Q WSF  N+  
Sbjct: 14  KLSVPNNPVVMFERFTVEIHNDLRMFILDSHCYSKDDDLGLHILFPDEKQDWSFKGNWIA 73

Query: 83  TTLFHCSLKWEKGSRQFDGYYDRYE-QTGECPKNKCVWIVKQNGIYYVDKAGQHVFKYRW 142
           TT FHC L+WE G  +FD +    +  T  C    C+W  +Q+G+Y  + AG+ VF   W
Sbjct: 74  TTSFHCRLEWEVGYLEFDSFKSAPDFVTNYCGNQTCIWSARQDGVYLNNAAGEQVFYNYW 133

Query: 143 NV 144
            +
Sbjct: 134 EM 135

[Close]

BLAST of Sed0019144 vs. ExPASy TrEMBL
Match: A0A1S3BUQ9 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.5e-24
Identity = 56/131 (42.75%), Postives = 80/131 (61.07%), Query Frame = 0


Query: 14  VASQATGAREINRPNRSLIFTTNFRVEIHNELNMFILDSHCKSKDNDLGLHILLPGQSQS 73
           + SQ TG  E+ +P+  L+    F + I+NEL M++LDSHC SKD+DLG  +L P   QS
Sbjct: 8   IKSQETGP-ELPKPHEPLVTFHKFNIRIYNELQMYLLDSHCYSKDDDLGTKVLYPNDEQS 67

Query: 74  WSFGRNFWRTTLFHCSLKWEKGSRQFDGYYDRYE-QTGECPKNKCVWIVKQNGIYYVDKA 133
           WSF  N+  TT FHC L+WE G  +FD + +  +  T  C K+ C W  +Q+G+Y  ++ 
Sbjct: 68  WSFRGNWLGTTNFHCKLEWENGYLEFDAFSNDVKFLTNFCAKSSCCWSARQDGVYLTNQN 127

Query: 134 GQHVFKYRWNV 144
           GQ VF   W +
Sbjct: 128 GQVVFNQNWEM 137

[Close]

BLAST of Sed0019144 vs. ExPASy TrEMBL
Match: A0A0A0KSN2 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G538550 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 6.1e-23
Identity = 58/141 (41.13%), Postives = 85/141 (60.28%), Query Frame = 0


Query: 5   LLLSIGLLLVASQATGAREINRPNR-SLIFTTNFRVEIHNELNMFILDSHCKSKDNDLGL 64
           +LL    L+V    + AR    P + S+I   ++++EIHN+L M++LDSHC SKDNDLGL
Sbjct: 7   VLLIFLFLIVLFDMSMARFSFAPQKSSIIQLHHYQIEIHNDLEMYLLDSHCFSKDNDLGL 66

Query: 65  HILLPGQSQSWSFGRNFWRTTLFHCSLKWEKGSRQFDGYYDRYEQTGE-CPKNKCVWIVK 124
           HIL PG+ Q WSF  N + TT F C L+WE G  +FD +   +      C    C W  +
Sbjct: 67  HILFPGELQDWSFQDNDFETTKFRCILEWENGLLEFDSFKTNHNFLNNFCGNLTCSWSAR 126

Query: 125 QNGIYYVDKAGQHVFKYRWNV 144
           Q+G+Y  +  G++VF+  W++
Sbjct: 127 QDGVYLTNVKGEYVFQDYWDM 147

[Close]

BLAST of Sed0019144 vs. ExPASy TrEMBL
Match: A0A6J1F5H5 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 1.5e-21
Identity = 51/120 (42.50%), Postives = 71/120 (59.17%), Query Frame = 0


Query: 26  RPNRSLIFTTNFRVEIHNELNMFILDSHCKSKDNDLGLHILLPGQSQSWSFGRNFWRTTL 85
           +PN        F VEIHN+L MFILD+HC SKD+DLGLHIL P + Q WSF  N+  TT 
Sbjct: 44  KPNNPNPAFERFTVEIHNDLRMFILDAHCSSKDDDLGLHILFPDEEQDWSFHDNWLGTTE 103

Query: 86  FHCSLKWEKGSRQFDGYYDRYEQ--TGECPKNKCVWIVKQNGIYYVDKAGQHVFKYRWNV 144
           FHC L+W+ G  +FD ++   +      C    C+W  +Q+G+Y  ++    VF   W++
Sbjct: 104 FHCRLEWQYGLLEFDAFHSNTDNLLIDYCANATCIWSARQDGVYLNNQDDDLVFYEYWDM 163

[Close]

BLAST of Sed0019144 vs. ExPASy TrEMBL
Match: A0A6J1FMU2 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111447244 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 2.6e-21
Identity = 52/118 (44.07%), Postives = 69/118 (58.47%), Query Frame = 0


Query: 27  PNRSLIFTTNFRVEIHNELNMFILDSHCKSKDNDLGLHILLPGQSQSWSFGRNFWRTTLF 86
           PN+  I    F V I N L M++LDSHC SKD+DLG+ ++ P   Q WSF  N+  +T F
Sbjct: 42  PNQPAIALRKFDVHIRNGLRMYLLDSHCCSKDDDLGVRVIYPDDEQRWSFRGNWLGSTNF 101

Query: 87  HCSLKWEKGSRQFDGYYDRYE-QTGECPKNKCVWIVKQNGIYYVDKAGQHVFKYRWNV 144
           HC L+W  G  +FD + D     T  C  + CVW  KQ+G+Y  D+ GQ VFK  W +
Sbjct: 102 HCKLEWAYGFVEFDAFADDLNFVTSFCGDSSCVWTAKQDGLYLADQNGQLVFKDHWEL 159

[Close]

BLAST of Sed0019144 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-20
Identity = 60/152 (39.47%), Postives = 83/152 (54.61%), Query Frame = 0


Query: 3   QFLLLSIGLLLVA---SQATGAREINRPN-----RSLIFTTNFRVEIHNEL-NMFILDSH 62
           Q+L L I ++ +    SQA    +I  PN      S+  T+   VEI+N+L N   L  H
Sbjct: 6   QYLSLFILIIFITTKLSQADHKNDIPVPNDPSSTNSVFPTSKRTVEINNDLGNQLTLLYH 65

Query: 63  CKSKDNDLGLHILLPGQSQSWSFGRNFWRTTLFHCSLKWEKGSRQFDGYYDRYEQTGE-- 122
           CKSKD+DLG   L PG+S S+SFGR F+  TL+ CS  W   S  FD Y D  +  G+  
Sbjct: 66  CKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHRDSGGDNK 125

Query: 123 CPKNKCVWIVKQNG-IYYVDKAGQHVFKYRWN 143
           C  ++CVW +++NG   + D+  Q    Y WN
Sbjct: 126 CESDRCVWKIRRNGPCRFNDETKQFDLCYPWN 157

[Close]

BLAST of Sed0019144 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 65.9 bits (159), Expect = 3.1e-11
Identity = 30/76 (39.47%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 50  LDSHCKSKDNDLGLHILLPGQSQSWSFGRNFWRTTLFHCSLKWEKGSRQFDGYYDRYEQT 109
           L  HCKSK +DLG+H++   Q   + F  N W++TLF CS +W+   + FD  YD     
Sbjct: 42  LTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWDSQFKSFD-IYDAQRDQ 101

Query: 110 GECPKNKCVWIVKQNG 126
           G C  + C W +K +G
Sbjct: 102 GIC--DDCQWEIKPDG 114

[Close]

BLAST of Sed0019144 vs. TAIR 10
Match: AT5G04347.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 64.7 bits (156), Expect = 6.9e-11
Identity = 34/89 (38.20%), Postives = 50/89 (56.18%), Query Frame = 0


Query: 41  IHNELNMFILDSHCKSKDNDLGLHILLPGQSQSWSFGRNFWRTTLFHCSLKWEKGSRQFD 100
           + NELN  +L   C+SKD++LG HIL  GQ    +F  N WR TLF C+L W+    +  
Sbjct: 26  VKNELNNKVLGVRCRSKDDNLGDHILRVGQMTKNNFDDNVWRRTLFWCNL-WKGPDFKLH 85

Query: 101 GYYDRYEQTGECPKN-KCVWIVKQNGIYY 129
             +D Y    +     + +WI +++GIYY
Sbjct: 86  VAFDAYRSQWKADIGPRYLWIAREDGIYY 113

[Close]

BLAST of Sed0019144 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 64.3 bits (155), Expect = 9.0e-11
Identity = 38/107 (35.51%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 39  VEIHNELNMFI-LDSHCKSKDNDLGLHILLPGQSQSWSFGRNFWRTTLFHCSLKWEKGSR 98
           V I+N+L   + L  HCKS+++DLG   L PG+S S+ F  + +  TLF+C   W   S 
Sbjct: 28  VVIYNDLGGGLPLRHHCKSREDDLGYQSLAPGRSWSFGFTPDIFGRTLFYCRFSWGAESH 87

Query: 99  QFDGY-YDRYEQTGECPKNKCVWIVKQNG-IYYVDKAGQHVFKYRWN 143
            FD Y   R ++  E    KC W +++NG   +  K G     Y W+
Sbjct: 88  IFDIYKQSRDKEFQEFGCKKCEWKIRKNGPCKFYKKTGMFDHCYSWD 134

[Close]

BLAST of Sed0019144 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10
Identity = 33/104 (31.73%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 38  RVEIHNEL-NMFILDSHCKSKDNDLGLHILLPGQSQSWSFGRNFWRTTLFHCSLKWEKGS 97
           +V + N+L +  +L  HC+SKD+DLG HIL  GQ   ++FG N W+TT F C +      
Sbjct: 28  KVVLSNQLEHSKLLKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNF 87

Query: 98  RQFDGYYDRYEQTGECPKNKCVWIVKQNGIYYVDKAGQHVFKYR 141
           +    +        +  +  C WI +++GIY+         KY+
Sbjct: 88  KHHLDFVAYETSWSKALEASCKWIGREDGIYFSQDGVPPTKKYQ 131

The following BLAST results are available for this feature:

BLAST of Sed0019144 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031483.1	2.3e-32	51.35	S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6600849.1	3.3e-31	51.13	S-protein-like 74, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023546939.1	7.4e-31	54.33	S-protein homolog 74-like [Cucurbita pepo subsp. pepo]	[more]
KAE8648167.1	6.0e-25	45.90	hypothetical protein Csa_018435 [Cucumis sativus]	[more]
XP_008453055.1	3.0e-24	42.75	PREDICTED: uncharacterized protein LOC103493877 [Cucumis melo]	[more]

BLAST of Sed0019144 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLQ5	2.3e-19	39.47	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
F2Q9V4	1.1e-10	34.29	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]
Q40975	1.5e-10	36.14	Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1	[more]
P0DN92	4.4e-10	30.22	S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1	[more]
O23020	4.4e-10	39.47	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]

BLAST of Sed0019144 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KL79	2.9e-25	45.90	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G016040 PE=3 SV=1	[more]
A0A1S3BUQ9	1.5e-24	42.75	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103493877 PE=3 SV=1	[more]
A0A0A0KSN2	6.1e-23	41.13	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_5G538550 PE=3 SV=1	[more]
A0A6J1F5H5	1.5e-21	42.50	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111441018 PE=3 SV=1	[more]
A0A6J1FMU2	2.6e-21	44.07	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111447244 PE=3 SV=1	[more]

BLAST of Sed0019144 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16195.1	1.6e-20	39.47	Plant self-incompatibility protein S1 family	[more]
AT1G04645.1	3.1e-11	39.47	Plant self-incompatibility protein S1 family	[more]
AT5G04347.1	6.9e-11	38.20	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	9.0e-11	35.51	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	1.2e-10	31.73	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 38..141 e-value: 6.3E-26 score: 90.9
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 22..134
None	No IPR available	PANTHER	PTHR31232:SF47	SUBFAMILY NOT NAMED	coord: 22..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0019144.1	Sed0019144.1	mRNA