Sed0018949 (gene) Chayote v1

Overview


Name	Sed0018949
Type	gene
Organism	Sechium edule (Chayote v1)
Description	E3 ubiquitin-protein ligase SDIR1
Location	LG03: 4508525 .. 4512977 (-)
RNA-Seq Expression	Sed0018949
Synteny	Sed0018949

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTGAGAATATACCAAATTCTAAATTTTGTATCTATAGGAAATAAATTCAAAATCTCATCCAACCATTCTGTCCAAACAAACGGTAGATGTTAGGGAAGCAAAAGCAGACGCAGGCGTTAGAATTTGACCAAACAAAACCAAACGAAATCAAAATCAAATACTACGTCGTTTAATGCCCATTCACTCGCCCCGATAGAAATCGAAGCCAAGGCCGAGTCGCAAATCAAACTCAACGCGGCCGAGTCGCCTCCCCCATCTTCGCCGTCGCCGACGCCGGGTTTTCATTTTCACATAGTTTTAAGATACCCCATTATCTTATCTCTTCGATTTTGATGTTTTTGGACATTCAAAATCAACCCCATTTACTCGATTCTCTTCTGTAAGTCTACGATTTCTCTCAAGGGTCATTCTAATTCGATTGTTTATTTACTGATTCGTATATTCTTGTTTCAATTTCGATTGTTTTACTGTCATCGAAGCTTACGGGGCTGTACAATTGCTGTGTCTGTTTGACTAATGTTCTCGCTACGTTTAGTTGTCTATGGGGGTTGGTTTGAAATTTGGAGAATTGGGAGTTTTGACGAAACGGATTCGAAACTCATCTGGTACAATCGATCGCAAATTTTGATTTTCTAAGTCGAGCATTAGCATTTGAATGGATTGTGGAGACCTCATTCTTTTGATTTTGGATGGATATGGATGCCTATATGCACTTGAGTTTGAAGGCAGTGATCTTAGGGTCTTTGCCCATGAATCTCTTCTCTCTTTTTTTAATCAGGGTAACCACGCCCGTCCTTTGCCCAGGTACCGGAGACATCGAAGGAGTAATGTTACAAGTGAGTCTCGAACTCAAGACCTCGAGGGAAGCATACCCTCAAAGCTCAAGTCTTCAACCACTGTGCCATCCCTCGGGGACGAATCTCTTTTTTTATATATATATATATCCGCGATGGTCCGCACGTCTCGACTAACTCTACGACATTTTGATGTCAAGGAAACCCCTAAGAAAATAATTCCTACCCTCTTTGAGCACTAGATCACTCTATGATGGTTAATGTCTTTTCACGTAGTCTCATTTCTTTGAGGGTTTTTAGGGTCAAGACATTGTCGTCTATGTTCTCTGAAAGAATCATTCAACTTGAGTTATCTAATCTTCGCGAAGCTGATGATCAATCAGCTCATGAACATGGCTTATACATTGAATTTGACTGATAAGATAACAATTAATTGGTGTATTGTTTGTGAACATGCCAGCAATTAAAAGATCTCAAACTCTTTGAAATTATTCATGATTATATTTTGTTATATATGAGTAGTTTTATTGTTTAGTCATGGACATTACATCTTTACATTTTTAAGGTTAAGGTATGACAAAGCTTAGGCTTTTATGAGTTTTTGATGCGCCAAACTTCGTTTCTTATGTCATTTGTCGCTTGGATATGAGAATTATGAATGATGGGTTAGCTGAGTGAGGACTAAAGAGATGTGGGCATCTTTTTGTTTCTGTATATTATTAAGTTACTGGAGCTTCTTTTCAGTGTGATTTCTGCAAAATAGTGCCATAAGTTCATTAAATTTTACATTCTGCAGGTTCACATTTCTCTGACTTCAACTAGCTGTTGCAAGTGCTTCAGACATGAGTTTTGTTTTCCGTGGAACAAGAGTTCCAGACATTGAAAATGGTCTATCTGGATTTATACCAGAGCGGCGTGCAATGGTGTGCTCGATATTTCACAGACTTTACTCTTTCAATTACCAATGCTCAGAAATTTTAAGCAATTGCACTTGTTATGATTTTTGTTTTATTTATTTATTTTTGCTTCCAATCAGCGAGTTCATCCAACACGTTCTGTTAATTCAAACTCACTTGCCTTTCTTGTCACAGGTATCCTTTAACCGATTTCTGTTCATGTGATAATTTTGATCTATTGGATTGCTTTAACTTAATGACTTCCTTGCAGTCCTTTTGCTATTTATGATATTAAACTCTCACCAGATGTCACCAAATTTTCTGGTAAGTTTCATATTTCACACTGTGAATGTCTAGTAGACTGGTCTTACTTTCTCACCCTTGATGCAAATCTTTATATTTTATTCGTCTGAACATGCATATTTAGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTATGCAACTTGTCAACAACTTCAAGCCCAAGCCCAAGCTAGAGCTATGGCAGCTAGTGGGCTTCTTGGCCACACTGAATTGAGGTTACAGATGCCACCATCAATAGCACTTGCAACAAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTTGATAGGGAATTCGATGATTTAGGTGCGGTTCAAATCTATTCAATGCAATTACTTAGCTTATAATTAGTTTGATATTCTTCTAGTCTAGTGTACCGATTTCAGCTATTTTTCAGCAAACTTCTTCAGTGGCACAAACTCTTCTTCATTTCACCATTCTCTCTCTTGTGTGTGTTGGGCTGAAATACACTTTGTTCATGGAAAATTTGGGGAAAATTTATCGATCAGATTCTTAGACAAGAAGTTGATGTGGGTTTTTGAAAATGCAAGAAATCCACTCCTTTCCTGGCCAAATTTAGGAATCACAAGTTTCTGACGTCATAAGTTTGCCCGCAAATGCAAGAAGTGGAAAAGGGTAAAAGTAGTGATTTTCATGCTGTCAATTGTTGAAAAGAAAATACCCTGAACGTACATCTAAAAGTGTGGCTAAGTTCTAAATTTGTGGGGGTTCTTTTTTTGGAAAATGGGAAATCGGAGCTTCGCTCCACTATACTCAGGTAACCACACTTATCTCTAGGCCAGACACAGGAAGCATTGAAGGAATGATTGGGTATTCTTATTGTGACGTCTCTATCTCTATCTCTGTTTTAGCTCATCTTATCTTGTCGTTGTGCTAAGGTACCAATGTTTCTTATATATTCTTGTCTGTGATACTGTATTAATTGACGTACCATTTTGCTTCAGACTATGAAACTTTGAGAGCATTGGATTCCGACAATGTTCCAACAACACCTTCAATGAGTGAGGAACAAATAAATGCTCTTCCAGTGCATAAATACAAGGTTTCTGGTCCTCAAAGGTAAAGCAACCCCATATTAGTCTACAATCCGGAGTTAGCTCGCGCATTCTTCTAGCTTTATTTTTAAGTTTTTTGCTAATAGATTGTTTTCAATGATGAAATTCACTCCAGCTTATCCCCAAATAATAATAATAATAAAATAAATTTAAAAAAAAAAAACTAAAATCAAGTTTTCTTTAAATTATCTGCAGTGACCCTGCTGTGAACCAGCAGGCTTCATCTTCAGAATCTAATGAGGTATCTATCAAATTTCTTTTTCCTTTCTTGCATGTTTGATTCTCTTATCTTGCCCTAAATGCCAAATGGTGTGTGTACACATAGAATAATTACTCATTCGTAAATACATTTCAGAACAGACAAAAAAGGGCATTTTGTTTTAAGTATTCTTGATTCTTATTTGATACCACCTATTCTACTCAATAATTATCATTTCAAGTACGTATTTTTAAATATTTTATTGCAGAAGAGACAAGATTTAGTTAAAGCAGTAGGCGGTACCAAGTCCTTAGAGGATGAACTTACATGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCGTACGTAGTTTGCCATGTTTGCATCAGGTTTATCTCTATCTCTTTGTCTGAACAAATGGTCGTGGATATTTTCTGTTGAAAATTCATGAAATTTTGTCTTCAAAGGGTGACACAGTGGTTGAAGACTTGGTCTTTGAGGTTATGCTCCCTTCAAAGTCCTAAGTTCGAGACTCAGTTGTGACATTACTCCTTCGATGTCTCTCGGTGCCTGGCCTAGGGACGGGCGTGGTTACCCTTATTTCAAAAAAAAAATTCATGGACTTTTCCTTAAAGATTGGCATACATTTTCTATCTGCTTGAGTTCCAATTTTTCATTTAATTTTATCTTGTAGTTCCATGACAACTGCATAGATCCATGGCTGCGACAGCAGGGAACGTGCCCTGTATGTAAATTCAGAGCAGTGCCCGGGTGGTCGGAACAGGGGCAAGAGGAAACGGATGCTTATATGGTCTAATTGGATGCAAAGCAATTGATCAAAGAAGTTTTGATGCTTGACAGACGTGGTGTGATTAGGTTGAGGGTAGGAATTAAAGGGATTGCAGTTGCCCTTCTGTATCTTTTTACTTTGGACGAACCATTTGATTGTATTCTTGAAGTTCATCATTTGTGATGATAAAGTCTCTGACCGTTGTGACAGAATTTTGTTCTTTGTACTATTCCAACTCTTACTAGTGTATTTAGACACAACAACAACAACAAAAATTGTTCGAGCCTTGATTTGCTCATTTTTTGTGTAACTTTTTTATATTTTTGAGTATCAATTTATG

mRNA sequence

TTTTTGAGAATATACCAAATTCTAAATTTTGTATCTATAGGAAATAAATTCAAAATCTCATCCAACCATTCTGTCCAAACAAACGGTAGATGTTAGGGAAGCAAAAGCAGACGCAGGCGTTAGAATTTGACCAAACAAAACCAAACGAAATCAAAATCAAATACTACGTCGTTTAATGCCCATTCACTCGCCCCGATAGAAATCGAAGCCAAGGCCGAGTCGCAAATCAAACTCAACGCGGCCGAGTCGCCTCCCCCATCTTCGCCGTCGCCGACGCCGGGTTTTCATTTTCACATAGTTTTAAGATACCCCATTATCTTATCTCTTCGATTTTGATGTTTTTGGACATTCAAAATCAACCCCATTTACTCGATTCTCTTCTGTTCACATTTCTCTGACTTCAACTAGCTGTTGCAAGTGCTTCAGACATGAGTTTTGTTTTCCGTGGAACAAGAGTTCCAGACATTGAAAATGGTCTATCTGGATTTATACCAGAGCGGCGTGCAATGCGAGTTCATCCAACACGTTCTGTTAATTCAAACTCACTTGCCTTTCTTGTCACAGTCCTTTTGCTATTTATGATATTAAACTCTCACCAGATGTCACCAAATTTTCTGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTATGCAACTTGTCAACAACTTCAAGCCCAAGCCCAAGCTAGAGCTATGGCAGCTAGTGGGCTTCTTGGCCACACTGAATTGAGGTTACAGATGCCACCATCAATAGCACTTGCAACAAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTTGATAGGGAATTCGATGATTTAGACTATGAAACTTTGAGAGCATTGGATTCCGACAATGTTCCAACAACACCTTCAATGAGTGAGGAACAAATAAATGCTCTTCCAGTGCATAAATACAAGGTTTCTGGTCCTCAAAGTGACCCTGCTGTGAACCAGCAGGCTTCATCTTCAGAATCTAATGAGAAGAGACAAGATTTAGTTAAAGCAGTAGGCGGTACCAAGTCCTTAGAGGATGAACTTACATGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCGTACGTAGTTTGCCATGTTTGCATCAGTTCCATGACAACTGCATAGATCCATGGCTGCGACAGCAGGGAACGTGCCCTGTATGTAAATTCAGAGCAGTGCCCGGGTGGTCGGAACAGGGGCAAGAGGAAACGGATGCTTATATGGTCTAATTGGATGCAAAGCAATTGATCAAAGAAGTTTTGATGCTTGACAGACGTGGTGTGATTAGGTTGAGGGTAGGAATTAAAGGGATTGCAGTTGCCCTTCTGTATCTTTTTACTTTGGACGAACCATTTGATTGTATTCTTGAAGTTCATCATTTGTGATGATAAAGTCTCTGACCGTTGTGACAGAATTTTGTTCTTTGTACTATTCCAACTCTTACTAGTGTATTTAGACACAACAACAACAACAAAAATTGTTCGAGCCTTGATTTGCTCATTTTTTGTGTAACTTTTTTATATTTTTGAGTATCAATTTATG

Coding sequence (CDS)

ATGAGTTTTGTTTTCCGTGGAACAAGAGTTCCAGACATTGAAAATGGTCTATCTGGATTTATACCAGAGCGGCGTGCAATGCGAGTTCATCCAACACGTTCTGTTAATTCAAACTCACTTGCCTTTCTTGTCACAGTCCTTTTGCTATTTATGATATTAAACTCTCACCAGATGTCACCAAATTTTCTGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTATGCAACTTGTCAACAACTTCAAGCCCAAGCCCAAGCTAGAGCTATGGCAGCTAGTGGGCTTCTTGGCCACACTGAATTGAGGTTACAGATGCCACCATCAATAGCACTTGCAACAAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTTGATAGGGAATTCGATGATTTAGACTATGAAACTTTGAGAGCATTGGATTCCGACAATGTTCCAACAACACCTTCAATGAGTGAGGAACAAATAAATGCTCTTCCAGTGCATAAATACAAGGTTTCTGGTCCTCAAAGTGACCCTGCTGTGAACCAGCAGGCTTCATCTTCAGAATCTAATGAGAAGAGACAAGATTTAGTTAAAGCAGTAGGCGGTACCAAGTCCTTAGAGGATGAACTTACATGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCGTACGTAGTTTGCCATGTTTGCATCAGTTCCATGACAACTGCATAGATCCATGGCTGCGACAGCAGGGAACGTGCCCTGTATGTAAATTCAGAGCAGTGCCCGGGTGGTCGGAACAGGGGCAAGAGGAAACGGATGCTTATATGGTCTAA

Protein sequence

MSFVFRGTRVPDIENGLSGFIPERRAMRVHPTRSVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLQMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDPAVNQQASSSESNEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNCIDPWLRQQGTCPVCKFRAVPGWSEQGQEETDAYMV

Homology

[Close]

BLAST of Sed0018949 vs. NCBI nr
Match: XP_038885371.1 (E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida] >XP_038885372.1 E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida] >XP_038885373.1 E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida] >XP_038885374.1 E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida])

HSP 1 Score: 511.9 bits (1317), Expect = 3.4e-141
Identity = 260/275 (94.55%), Postives = 263/275 (95.64%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHPTRSVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVH  R VNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLQMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRL MPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKV GPQSDP
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVPGPQSDP 180

Query: 181 AVNQQASSSESNEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNC 240
           +VNQQASSSESNEKRQDLV AVG TK+ EDELTCSVCLEQVNVGEL+RSLPCLHQFH NC
Sbjct: 181 SVNQQASSSESNEKRQDLVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVPGWSEQGQEETDAYMV 276
           IDPWLRQQGTCPVCKFRAV GWSEQGQ ETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

[Close]

BLAST of Sed0018949 vs. NCBI nr
Match: XP_023540467.1 (E3 ubiquitin-protein ligase SDIR1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 511.1 bits (1315), Expect = 5.8e-141
Identity = 260/275 (94.55%), Postives = 262/275 (95.27%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHPTRSVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGL GFIPERRAMRVH  R VNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLPGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLQMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRL MPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180

Query: 181 AVNQQASSSESNEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNC 240
           A NQQASSSESNEKR D V AVGGTKSL+DELTCSVCLEQVNVGEL+RSLPCLHQFH NC
Sbjct: 181 AANQQASSSESNEKRPDSVNAVGGTKSLQDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVPGWSEQGQEETDAYMV 276
           IDPWL QQGTCPVCKFRAVP WSEQGQ ETDAYMV
Sbjct: 241 IDPWLGQQGTCPVCKFRAVPAWSEQGQGETDAYMV 275

[Close]

BLAST of Sed0018949 vs. NCBI nr
Match: XP_022133780.1 (E3 ubiquitin-protein ligase SDIR1 [Momordica charantia] >XP_022133781.1 E3 ubiquitin-protein ligase SDIR1 [Momordica charantia])

HSP 1 Score: 511.1 bits (1315), Expect = 5.8e-141
Identity = 260/275 (94.55%), Postives = 263/275 (95.64%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHPTRSVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVH  R VNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLQMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRL MPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSD 
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 181 AVNQQASSSESNEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNC 240
           A+NQQASSSESNEKRQD V AVGGTK+LEDELTCSVCLEQVNVGEL+RSLPCLHQFH NC
Sbjct: 181 AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC 240

Query: 241 IDPWLRQQGTCPVCKFRAVPGWSEQGQEETDAYMV 276
           IDPWLRQQGTCPVCKFRAV GWSE G  ETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV 275

[Close]

BLAST of Sed0018949 vs. NCBI nr
Match: XP_022955456.1 (E3 ubiquitin-protein ligase SDIR1-like isoform X2 [Cucurbita moschata] >KAG6602657.1 E3 ubiquitin-protein ligase SDIR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 511.1 bits (1315), Expect = 5.8e-141
Identity = 260/275 (94.55%), Postives = 262/275 (95.27%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHPTRSVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGL GFIPERRAMRVH  R VNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLPGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLQMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRL MPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180

Query: 181 AVNQQASSSESNEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNC 240
           A NQQASSSESNEKR D V AV GTKSL+DELTCSVCLEQVNVGEL+RSLPCLHQFH NC
Sbjct: 181 AANQQASSSESNEKRPDSVNAVSGTKSLQDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVPGWSEQGQEETDAYMV 276
           IDPWL QQGTCPVCKFRAVPGWSEQGQ ETDAYMV
Sbjct: 241 IDPWLGQQGTCPVCKFRAVPGWSEQGQGETDAYMV 275

[Close]

BLAST of Sed0018949 vs. NCBI nr
Match: XP_022991089.1 (E3 ubiquitin-protein ligase SDIR1-like [Cucurbita maxima] >XP_022991090.1 E3 ubiquitin-protein ligase SDIR1-like [Cucurbita maxima] >XP_022991091.1 E3 ubiquitin-protein ligase SDIR1-like [Cucurbita maxima] >XP_022991092.1 E3 ubiquitin-protein ligase SDIR1-like [Cucurbita maxima] >XP_022991093.1 E3 ubiquitin-protein ligase SDIR1-like [Cucurbita maxima])

HSP 1 Score: 510.0 bits (1312), Expect = 1.3e-140
Identity = 259/275 (94.18%), Postives = 262/275 (95.27%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHPTRSVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGL GFIPERRAMRVH  R VNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLPGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLQMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRL MPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180

Query: 181 AVNQQASSSESNEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNC 240
           A NQQASSSESNEKR D V AV GTKSL+DELTCSVCLEQVNVGEL+RSLPCLHQFH NC
Sbjct: 181 AANQQASSSESNEKRPDSVNAVSGTKSLQDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVPGWSEQGQEETDAYMV 276
           IDPWL QQGTCPVCKFRAVPGWSEQGQ +TDAYMV
Sbjct: 241 IDPWLGQQGTCPVCKFRAVPGWSEQGQGQTDAYMV 275

[Close]

BLAST of Sed0018949 vs. ExPASy Swiss-Prot
Match: Q9M2S6 (E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana OX=3702 GN=SDIR1 PE=1 SV=1)

HSP 1 Score: 397.5 bits (1020), Expect = 1.2e-109
Identity = 214/273 (78.39%), Postives = 231/273 (84.62%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLS-GFIPERRAMRVHPTRSVNSNSLAFLVTVLLLFMILNSHQMS 60
           MSFVFRG+R  D+E+G S GF+PERRAMRVH  R VNSNSLAFLVTVLLLFMILNSHQM 
Sbjct: 1   MSFVFRGSR-GDLESGFSGGFLPERRAMRVHGARPVNSNSLAFLVTVLLLFMILNSHQMP 60

Query: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLQMPPSIALATR 120
           PNFLLWLVLGVFLMATTLRMYATCQQLQA AQA+A AASGL  HTELRL +PPSIALATR
Sbjct: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAHAQAQAAAASGLFSHTELRLHVPPSIALATR 120

Query: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSD 180
           GRLQGLRLQLALLDREFDDLDYETLRALDSDNV TT SMSEE+INALPVHKYKV  P++ 
Sbjct: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTT-SMSEEEINALPVHKYKVLDPENG 180

Query: 181 PAVNQQASSSESNEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDN 240
            ++ +QAS+S S EK  D   A    K  EDELTCSVCLEQV VGE+VR+LPCLHQFH  
Sbjct: 181 CSLAKQASTSSSAEKMLD--SANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAG 240

Query: 241 CIDPWLRQQGTCPVCKFRAVPGWSEQGQEETDA 273
           CIDPWLRQQGTCPVCKFRA  GW EQ + + DA
Sbjct: 241 CIDPWLRQQGTCPVCKFRAHSGWQEQDEIDDDA 269

[Close]

BLAST of Sed0018949 vs. ExPASy Swiss-Prot
Match: Q9C1X4 (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP32A8.03c PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.5e-11
Identity = 25/65 (38.46%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 208 LEDELTCSVCLEQVNVGELVRSLPCLHQFHDNCIDPWLRQQGTCPVCKFRAVPGWSEQGQ 267
           +++E  C++C+E   + + V  LPC H FH+NCI PWLR  GTC +C+    P   ++  
Sbjct: 390 IDEEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRAPVDPNSQQRNN 449

Query: 268 EETDA 273
             TD+
Sbjct: 450 TSTDS 454

[Close]

BLAST of Sed0018949 vs. ExPASy Swiss-Prot
Match: Q5NCP0 (E3 ubiquitin-protein ligase RNF43 OS=Mus musculus OX=10090 GN=Rnf43 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.9e-11
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 214 CSVCLEQVNVGELVRSLPCLHQFHDNCIDPWLRQQGTCPVCKFRAVPG 262
           C++CLE+ + G+ +R + CLH+FH  C+DPWL Q  TCP+C F  V G
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHRTCPLCMFNIVEG 319

[Close]

BLAST of Sed0018949 vs. ExPASy Swiss-Prot
Match: Q68DV7 (E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens OX=9606 GN=RNF43 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.3e-10
Identity = 30/81 (37.04%), Postives = 44/81 (54.32%), Query Frame = 0


Query: 181 AVNQQASSSESNEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNC 240
           A++Q A+       RQ   +      S      C++CLE+ + G+ +R + CLH+FH NC
Sbjct: 239 AISQLATRRYQASCRQARGEWPDSGSSCSSAPVCAICLEEFSEGQELRVISCLHEFHRNC 298

Query: 241 IDPWLRQQGTCPVCKFRAVPG 262
           +DPWL Q  TCP+C F    G
Sbjct: 299 VDPWLHQHRTCPLCMFNITEG 319

[Close]

BLAST of Sed0018949 vs. ExPASy Swiss-Prot
Match: Q7T0Q3 (E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis OX=8355 GN=rnf126-a PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 32/64 (50.00%), Postives = 37/64 (57.81%), Query Frame = 0


Query: 192 NEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNCIDPWLRQQGTC 251
           NEK Q L       + +   L C VC E   VGE VR LPC H FH++CI PWL Q  TC
Sbjct: 206 NEKIQALPTIQITEEHVGSGLECPVCKEDYTVGECVRQLPCNHLFHNDCIIPWLEQHDTC 265

Query: 252 PVCK 256
           PVC+
Sbjct: 266 PVCR 269

[Close]

BLAST of Sed0018949 vs. ExPASy TrEMBL
Match: A0A6J1BW51 (E3 ubiquitin-protein ligase SDIR1 OS=Momordica charantia OX=3673 GN=LOC111006265 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 2.8e-141
Identity = 260/275 (94.55%), Postives = 263/275 (95.64%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHPTRSVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVH  R VNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLQMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRL MPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSD 
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 181 AVNQQASSSESNEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNC 240
           A+NQQASSSESNEKRQD V AVGGTK+LEDELTCSVCLEQVNVGEL+RSLPCLHQFH NC
Sbjct: 181 AMNQQASSSESNEKRQDSVSAVGGTKTLEDELTCSVCLEQVNVGELIRSLPCLHQFHTNC 240

Query: 241 IDPWLRQQGTCPVCKFRAVPGWSEQGQEETDAYMV 276
           IDPWLRQQGTCPVCKFRAV GWSE G  ETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVTGWSEHGHGETDAYMV 275

[Close]

BLAST of Sed0018949 vs. ExPASy TrEMBL
Match: A0A6J1GTU0 (E3 ubiquitin-protein ligase SDIR1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457441 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 2.8e-141
Identity = 260/275 (94.55%), Postives = 262/275 (95.27%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHPTRSVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGL GFIPERRAMRVH  R VNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLPGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLQMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRL MPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180

Query: 181 AVNQQASSSESNEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNC 240
           A NQQASSSESNEKR D V AV GTKSL+DELTCSVCLEQVNVGEL+RSLPCLHQFH NC
Sbjct: 181 AANQQASSSESNEKRPDSVNAVSGTKSLQDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVPGWSEQGQEETDAYMV 276
           IDPWL QQGTCPVCKFRAVPGWSEQGQ ETDAYMV
Sbjct: 241 IDPWLGQQGTCPVCKFRAVPGWSEQGQGETDAYMV 275

[Close]

BLAST of Sed0018949 vs. ExPASy TrEMBL
Match: A0A6J1JV67 (E3 ubiquitin-protein ligase SDIR1-like OS=Cucurbita maxima OX=3661 GN=LOC111487789 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 6.2e-141
Identity = 259/275 (94.18%), Postives = 262/275 (95.27%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHPTRSVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGL GFIPERRAMRVH  R VNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLPGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLQMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRL MPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180

Query: 181 AVNQQASSSESNEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNC 240
           A NQQASSSESNEKR D V AV GTKSL+DELTCSVCLEQVNVGEL+RSLPCLHQFH NC
Sbjct: 181 AANQQASSSESNEKRPDSVNAVSGTKSLQDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVPGWSEQGQEETDAYMV 276
           IDPWL QQGTCPVCKFRAVPGWSEQGQ +TDAYMV
Sbjct: 241 IDPWLGQQGTCPVCKFRAVPGWSEQGQGQTDAYMV 275

[Close]

BLAST of Sed0018949 vs. ExPASy TrEMBL
Match: E5GC70 (Protein binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 1.8e-140
Identity = 259/275 (94.18%), Postives = 262/275 (95.27%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHPTRSVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVH  R VNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLQMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRL MPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKVSGPQSD 
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 181 AVNQQASSSESNEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNC 240
           +VNQQASSSESNEKRQD V AVG TK+ EDELTCSVCLEQVNVGEL+RSLPCLHQFH NC
Sbjct: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVPGWSEQGQEETDAYMV 276
           IDPWLRQQGTCPVCKFRAV GWSEQGQ ETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

[Close]

BLAST of Sed0018949 vs. ExPASy TrEMBL
Match: A0A1S3B3A3 (E3 ubiquitin-protein ligase SDIR1 OS=Cucumis melo OX=3656 GN=LOC103485511 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 1.8e-140
Identity = 259/275 (94.18%), Postives = 262/275 (95.27%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHPTRSVNSNSLAFLVTVLLLFMILNSHQMSP 60
           MSFVFRGTRVPDIENGLSGFIPERRAMRVH  R VNSNSLAFLVTVLLLFMILNSHQMSP
Sbjct: 1   MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSP 60

Query: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLQMPPSIALATRG 120
           NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRL MPPSIALATRG
Sbjct: 61  NFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRG 120

Query: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDP 180
           RLQGLRLQLALLDREFDDLDYETLRALDSDN PTTPSMSEEQINALPVHKYKVSGPQSD 
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDS 180

Query: 181 AVNQQASSSESNEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNC 240
           +VNQQASSSESNEKRQD V AVG TK+ EDELTCSVCLEQVNVGEL+RSLPCLHQFH NC
Sbjct: 181 SVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQFHANC 240

Query: 241 IDPWLRQQGTCPVCKFRAVPGWSEQGQEETDAYMV 276
           IDPWLRQQGTCPVCKFRAV GWSEQGQ ETDAYMV
Sbjct: 241 IDPWLRQQGTCPVCKFRAVSGWSEQGQGETDAYMV 275

[Close]

BLAST of Sed0018949 vs. TAIR 10
Match: AT3G55530.1 (RING/U-box superfamily protein )

HSP 1 Score: 397.5 bits (1020), Expect = 8.7e-111
Identity = 214/273 (78.39%), Postives = 231/273 (84.62%), Query Frame = 0


Query: 1   MSFVFRGTRVPDIENGLS-GFIPERRAMRVHPTRSVNSNSLAFLVTVLLLFMILNSHQMS 60
           MSFVFRG+R  D+E+G S GF+PERRAMRVH  R VNSNSLAFLVTVLLLFMILNSHQM 
Sbjct: 1   MSFVFRGSR-GDLESGFSGGFLPERRAMRVHGARPVNSNSLAFLVTVLLLFMILNSHQMP 60

Query: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLQMPPSIALATR 120
           PNFLLWLVLGVFLMATTLRMYATCQQLQA AQA+A AASGL  HTELRL +PPSIALATR
Sbjct: 61  PNFLLWLVLGVFLMATTLRMYATCQQLQAHAQAQAAAASGLFSHTELRLHVPPSIALATR 120

Query: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSD 180
           GRLQGLRLQLALLDREFDDLDYETLRALDSDNV TT SMSEE+INALPVHKYKV  P++ 
Sbjct: 121 GRLQGLRLQLALLDREFDDLDYETLRALDSDNVSTT-SMSEEEINALPVHKYKVLDPENG 180

Query: 181 PAVNQQASSSESNEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDN 240
            ++ +QAS+S S EK  D   A    K  EDELTCSVCLEQV VGE+VR+LPCLHQFH  
Sbjct: 181 CSLAKQASTSSSAEKMLD--SANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAG 240

Query: 241 CIDPWLRQQGTCPVCKFRAVPGWSEQGQEETDA 273
           CIDPWLRQQGTCPVCKFRA  GW EQ + + DA
Sbjct: 241 CIDPWLRQQGTCPVCKFRAHSGWQEQDEIDDDA 269

[Close]

BLAST of Sed0018949 vs. TAIR 10
Match: AT1G04790.1 (RING/U-box superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-13
Identity = 42/124 (33.87%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 132 LDREFDDLDYETLRALDSDNVPTTPSMSEEQINALPVHKYKVSGPQSDPAVNQQASSSES 191
           +DR+F + DYE L ALD +N                 H++   G  S   +N    S+  
Sbjct: 542 MDRDFTEDDYELLLALDENN-----------------HRH---GGASANRINNLPESTVQ 601

Query: 192 NEKRQDLVKAVGGTKSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNCIDPWLRQQGTC 251
            +  Q+               TC +CLE   +G+ +R LPCLH+FH +CIDPWL +  +C
Sbjct: 602 TDNFQE---------------TCVICLETPKIGDTIRHLPCLHKFHKDCIDPWLGRSKSC 630

Query: 252 PVCK 256
           PVCK
Sbjct: 662 PVCK 630

[Close]

BLAST of Sed0018949 vs. TAIR 10
Match: AT4G32600.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 9.2e-12
Identity = 40/113 (35.40%), Postives = 60/113 (53.10%), Query Frame = 0


Query: 161 EQINALPVHKYKVSGPQSDPAVNQQASSSESN--EKRQDLVKAVGGTKSLEDELTCSVCL 220
           E INALP HK+K+   +S+   N  +S+SE        D  +A+ G     ++  C +CL
Sbjct: 314 ESINALPTHKFKLKKSRSNGDDN-GSSTSEGGVVAAGTDNERAISG-----EDAVCCICL 373

Query: 221 EQVNVGELVRSLPCLHQFHDNCIDPWLRQQGTCPVCKFRAVPGWSEQGQEETD 272
            +    E +R LPC H FH  C+D WL+   +CP+CK       SE G++ +D
Sbjct: 374 AKYANNEELRELPCSHFFHKECVDKWLKINASCPLCK-------SEVGEKNSD 413

[Close]

BLAST of Sed0018949 vs. TAIR 10
Match: AT1G68180.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 3.5e-11
Identity = 27/70 (38.57%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 206 KSLEDELTCSVCLEQVNVGELVRSLPCLHQFHDNCIDPWLRQQGTCPVCKFRAVPGWSEQ 265
           + L  E  C++C E+  VGE  + L CLH +H +CI  WL    TCP+C+F    G SE 
Sbjct: 130 EDLVKEKVCAICKEEFEVGEEGKELKCLHLYHSSCIVSWLNIHNTCPICRFEVNLGVSES 189

Query: 266 GQEETDAYMV 276
             +E  +Y +
Sbjct: 190 NVDEGGSYNI 199

[Close]

BLAST of Sed0018949 vs. TAIR 10
Match: AT3G61180.1 (RING/U-box superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 4.6e-11
Identity = 26/62 (41.94%), Postives = 34/62 (54.84%), Query Frame = 0


Query: 208 LEDELTCSVCLEQVNVGELVRSLPCLHQFHDNCIDPWLRQQGTCPVCKFRAVPGWSEQGQ 267
           L ++  CS+CL     G  +R LPC H FH  C+D WLR   TCP+CKF  +      G 
Sbjct: 317 LSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCKFNILKNGEPSGS 376

Query: 268 EE 270
           E+
Sbjct: 377 EQ 378

The following BLAST results are available for this feature:

BLAST of Sed0018949 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885371.1	3.4e-141	94.55	E3 ubiquitin-protein ligase SDIR1 isoform X1 [Benincasa hispida] >XP_038885372.1...	[more]
XP_023540467.1	5.8e-141	94.55	E3 ubiquitin-protein ligase SDIR1-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022133780.1	5.8e-141	94.55	E3 ubiquitin-protein ligase SDIR1 [Momordica charantia] >XP_022133781.1 E3 ubiqu...	[more]
XP_022955456.1	5.8e-141	94.55	E3 ubiquitin-protein ligase SDIR1-like isoform X2 [Cucurbita moschata] >KAG66026...	[more]
XP_022991089.1	1.3e-140	94.18	E3 ubiquitin-protein ligase SDIR1-like [Cucurbita maxima] >XP_022991090.1 E3 ubi...	[more]

BLAST of Sed0018949 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2S6	1.2e-109	78.39	E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana OX=3702 GN=SDIR1 PE=1 ...	[more]
Q9C1X4	4.5e-11	38.46	Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (stra...	[more]
Q5NCP0	9.9e-11	50.00	E3 ubiquitin-protein ligase RNF43 OS=Mus musculus OX=10090 GN=Rnf43 PE=1 SV=1	[more]
Q68DV7	1.3e-10	37.04	E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens OX=9606 GN=RNF43 PE=1 SV=1	[more]
Q7T0Q3	1.7e-10	50.00	E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis OX=8355 GN=rnf126-a PE=2 ...	[more]

BLAST of Sed0018949 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BW51	2.8e-141	94.55	E3 ubiquitin-protein ligase SDIR1 OS=Momordica charantia OX=3673 GN=LOC111006265...	[more]
A0A6J1GTU0	2.8e-141	94.55	E3 ubiquitin-protein ligase SDIR1-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JV67	6.2e-141	94.18	E3 ubiquitin-protein ligase SDIR1-like OS=Cucurbita maxima OX=3661 GN=LOC1114877...	[more]
E5GC70	1.8e-140	94.18	Protein binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A1S3B3A3	1.8e-140	94.18	E3 ubiquitin-protein ligase SDIR1 OS=Cucumis melo OX=3656 GN=LOC103485511 PE=4 S...	[more]

BLAST of Sed0018949 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55530.1	8.7e-111	78.39	RING/U-box superfamily protein	[more]
AT1G04790.1	2.2e-13	33.87	RING/U-box superfamily protein	[more]
AT4G32600.1	9.2e-12	35.40	RING/U-box superfamily protein	[more]
AT1G68180.1	3.5e-11	38.57	RING/U-box superfamily protein	[more]
AT3G61180.1	4.6e-11	41.94	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 214..254 e-value: 7.2E-9 score: 45.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 213..255 e-value: 2.3E-12 score: 47.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 214..255 score: 12.312242
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 188..260 e-value: 1.5E-19 score: 71.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..197
None	No IPR available	PANTHER	PTHR45977	TARGET OF ERK KINASE MPK-1	coord: 1..274
None	No IPR available	PANTHER	PTHR45977:SF4	E3 UBIQUITIN-PROTEIN LIGASE SDIR1	coord: 1..274
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 213..255 e-value: 6.88236E-25 score: 91.9797
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 206..261

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018949.1	Sed0018949.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009789	positive regulation of abscisic acid-activated signaling pathway
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0009651	response to salt stress
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0061630	ubiquitin protein ligase activity