Sed0018875 (gene) Chayote v1

Overview
NameSed0018875
Typegene
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
LocationLG06: 3963279 .. 3966974 (-)
RNA-Seq ExpressionSed0018875
SyntenySed0018875
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCACCTTTAATCATATGAAGTCAAAATCCTCCATTGCTAGTTTTGAAGGTTCATCCTCCATTCACACAACATTCATTTCAATTACAGTTTTGCCCAATTCTTCTCTCTCTCTCTCTCTCTCATTGGTTTCTCTTTCCATTACAACTTTTCCACTCCCCTCAACAAATAACCCCAACAATCATCCTCTCTTTCCCACTTTTTCTCTGCTCCATTTCCCTCTCTCTCTAAAAACCCATTTCCAATCCTCCATTTTCAGTCCCTCATGATCAAAGTTTTATCAATCTAAGTGACAAACAATCAAAATCATTGATGGGTTCCTGCGTTTCGATCCACAGAAATTCCGATTCCGCCGTGAAATTCAAACTGAATGAAATGGCGATTCCGCCGTCGCCGATCAAAGATACCATCGCTCCGATCAACGGCGGCGCTGGCGGCGTCTTTGTCAAATCTCAGAAATCCCCTTCTCAAATGGGTATTGCTTGTTTCTTCTTCTTATTGACTCTGTTGCTGTGTAATCGGGGGTTTTTTTTTTGTTTTGTTCTTATGAGATATGCGTTTTGTTTCTGTTGAGTGATGAACTTTGATGCTTTGGAATCGGTTCTAAGCATGATTTTGGTTCGTTTTACTCTACTGATCTTTAGAAGCAAAGTTATGTGCGATCTAAAGTGTTTTTGGTTCTTGCGTGTTCCTTTGATTTGACTTTGATTGGTTTTATTTCTAAGCATATTTCCTTTTTTCTAATTCAGTGTCTTATTTAATCATTCACTTTTGGACATATTGTTTAGTTGGAATGATAAAGTTAATCTAGGTCCCATCTCTGTATTATATTATTATTTTAGACTGAGAAACCAATCTCTTTTCCAATGTAAATCTTCAGAGATTAATAATTGTTCATTAAAATTGGTGTAATCCCTGATTTCCTTTCTGTCTCTTGTGGCTTGATGATCAAATTTTGAGAAGGGATTGGGATTGTTCTGGGTACTGAAACAGAGAAATATTTTCTTTCTTCAGTGAAGTTTGTTGATGGTGCTTGATTTGAACTGTCTAATAGAGCTTTGTTACTTTTTATGGGTCAGATTTGTTTAATGATTATGGAAGGTTTGATCATATTGTAGCAATGATATCAAATAATTTTTCGATACCTTTGTGGCTTATTTTTAGTCCAACAATATTTGAAGTGGGAATTTGAACTCATGACCGGTAGATCGTAAGGACACATTTTGTTCATTATGCTCTTGTTAGCAACACCTTTATGCGATCCGGGTGTTCAACCATCAAATAAGGGATTGTTTCCTTTGAGGCAATGGGATTTTCAGGAATCAATTGCCTTGTATAGTCTTTGTTAGAGAAAGGAGAAAAGGATGGATGAAAGCAAGACTTCTCTACCCTCAAGGGGCAACTTCGTTGGTTAAGGGTTGAGTCTTTCAACGCATGTTTCTTTGGAGGTCTAAAGTTCAAGTCCCACGAGTTAGCTTAATTGTAAAATCCTTTGTTGTTTCCTTGATCCGAGTCTTGGGACTGGCGCGGGTGCCCCTTGCCGATTTTATAAAAAAAAAGACTTCTCTTCTCCATTCCTTCGATGTGTCCGGATGCCGGACTTGGGGATGGGCATGGTTACCCTGGTTATAGTGGAGTGAAATTCCGATTTCCCAGTTTAGAAAAAAGATCTCTTCATAGAATTTCTTAGCAGAAGTGCTTCCTGTTCTTGGACTTCTTTCATAACTTACAAGGATGTTGTAACTGAGTTCCATTGTGAACTTCACATATTTATTTACTCATCGTTTCTATGCTTGGAGTTTCAAACTTTACTAACATGATATGGTGACACAAATCCATTATTACTGAACTCAAATGGTCTAGGCTGTGAATTGTCTAGGCTGCTATTAGAACTTCTTCACATTTTTTTGTCTTTTTCTTATATTTTTTAGTATTCGATGACTATTCTCACAAGACAATTACTTATTCTTGTTACATTTAGTTGTTAAGATAACTTGTATGGTTTAAATCTAAGATATATAGTCATTATGACTTAGAACTTATTCGAGCTCTTTATGATTTATCTGGTTCTTCCTGATTACTAAGTCAACTCGTGATGATTATTTCTCGTATGTACTGGCATAGTGAGTTTTTTTTTTCTGTCCATGACTTTTTTGAAAGAGTTTTTCACAGAAGTCCAGGTGTTCTATACAAGTTCATTAACTCGTGAAACAGAACGTACATCGAAATCAAATTTTAGTACATCATTCTTTTGTTTTCCATCTCATTTCTTCGTATCGAATTTGAAATGGCTAATCAATGAAAGAAGCAAGTTGACAATGGAGCTGTTTTCATAGGTAGCAAAGATGAAGCGTTTTTTGATTCCCGAGGTTGGTTGGACTCAGATTGCGAAGATGATTTCTACAGTGTGGGTGGTAAGTAGATGTTTGAATTTTGAGTTAAATTTCAAGTTTAGTTCTTACACTTTAACGTCTCTATTCAGTAGATTCTTCAACTTAAAAAAGTATTTATTAAGCGCTTAAACTTTAAAAAGGCCTAATACATTTTTAAACTTCTAAAGAGTGTTGAACAAACTAGGGATCTATTAGGTTCAAAATAGAAAGTTGATTTTGAAGTTATGGGACCTATTAGATACAAATTGAATGATGAGAGATCTACCGGCTACTTTTTAAAGTTCAAGAGCCTATTCGACACGTCCCCGTGGAGTGGGTGTGGTGGTCGAAGATTTGGACTTTGAAAGTATGCTCCCTTTAAGGTCCTAGGTTCGACCACTTGTGACATTAATTTGTAGACACTTCTCGTGTCTTCATTCCTTCGATGTCTCCTGATGCCTGATCTAGGGACGTGCGTGGAACAAATATGAAAGTTTATGCTAATGGCTTTTTTATTTTATTTTTAATCTCCTCTCCGGAAGTATTTAATGACGATGCTTGCAGATTTCACCCCTTCACGGGAAAATACTCCGGTACACGGCAGTTTCACCTCCGGTACTCCACGAATCAACCAAGTTCATGTCATTGACGATCGAACTCCGGTCGCTATTCCGGAACCATCGCCTACTGGAAAGAAGAAGCTGGCTGAACTTTTCAGGGAGAGCTCCAGAAATGGCACAAGCATACAAGCCAAGCCAACTCTAAACGAACTCGCTCTGCAGTCGAATCCCGAAACGCCTTACATTTCGGGAACAAACTCCGTATGTAGTAGCGAGAGGACTCCAAATGGAAATGTCTGGATTGAGAAGGAGAGGGCATTGAGATCTACACCATGCTGCCTTCCAAACTTGGGATCATGTGGTAGCTTCGGCGACCGAAGGAAGAAGACGAGTCCCACCATAGCTGTATAAAGCAAGGTTCGATCAAACTCGCTGTAAGACTAAATTCGTTCTGATTCTGAGATTGTGAGGCTTCAAAGCTTATGGAACTCACATTTGTTCAGAAATGTGTAAAGTTCTGAAATATCAGATACAGATGCAGCATCAATAATCTCAAGAGATAATGTTGTTGATGAAGCCAATGGTTTCTCTCATATATATATATATTAGATTCTTACTTCATAGTACGTTGTCTCCTATCAAGATTAGTTTGTATTTGGTTTTACATTTGTAAGCCTATATCCTCTATAATATTAGTTTTTCTTAATTCTCGTTGTTATTTTGTAAGATGATTGTTAAATAGATAATAATAATAATAAAAATAAAT

mRNA sequence

TCCACCTTTAATCATATGAAGTCAAAATCCTCCATTGCTAGTTTTGAAGGTTCATCCTCCATTCACACAACATTCATTTCAATTACAGTTTTGCCCAATTCTTCTCTCTCTCTCTCTCTCTCATTGGTTTCTCTTTCCATTACAACTTTTCCACTCCCCTCAACAAATAACCCCAACAATCATCCTCTCTTTCCCACTTTTTCTCTGCTCCATTTCCCTCTCTCTCTAAAAACCCATTTCCAATCCTCCATTTTCAGTCCCTCATGATCAAAGTTTTATCAATCTAAGTGACAAACAATCAAAATCATTGATGGGTTCCTGCGTTTCGATCCACAGAAATTCCGATTCCGCCGTGAAATTCAAACTGAATGAAATGGCGATTCCGCCGTCGCCGATCAAAGATACCATCGCTCCGATCAACGGCGGCGCTGGCGGCGTCTTTGTCAAATCTCAGAAATCCCCTTCTCAAATGGGTAGCAAAGATGAAGCGTTTTTTGATTCCCGAGGTTGGTTGGACTCAGATTGCGAAGATGATTTCTACAGTGTGGGTGATTTCACCCCTTCACGGGAAAATACTCCGGTACACGGCAGTTTCACCTCCGGTACTCCACGAATCAACCAAGTTCATGTCATTGACGATCGAACTCCGGTCGCTATTCCGGAACCATCGCCTACTGGAAAGAAGAAGCTGGCTGAACTTTTCAGGGAGAGCTCCAGAAATGGCACAAGCATACAAGCCAAGCCAACTCTAAACGAACTCGCTCTGCAGTCGAATCCCGAAACGCCTTACATTTCGGGAACAAACTCCGTATGTAGTAGCGAGAGGACTCCAAATGGAAATGTCTGGATTGAGAAGGAGAGGGCATTGAGATCTACACCATGCTGCCTTCCAAACTTGGGATCATGTGGTAGCTTCGGCGACCGAAGGAAGAAGACGAGTCCCACCATAGCTGTATAAAGCAAGGTTCGATCAAACTCGCTGTAAGACTAAATTCGTTCTGATTCTGAGATTGTGAGGCTTCAAAGCTTATGGAACTCACATTTGTTCAGAAATGTGTAAAGTTCTGAAATATCAGATACAGATGCAGCATCAATAATCTCAAGAGATAATGTTGTTGATGAAGCCAATGGTTTCTCTCATATATATATATATTAGATTCTTACTTCATAGTACGTTGTCTCCTATCAAGATTAGTTTGTATTTGGTTTTACATTTGTAAGCCTATATCCTCTATAATATTAGTTTTTCTTAATTCTCGTTGTTATTTTGTAAGATGATTGTTAAATAGATAATAATAATAATAAAAATAAAT

Coding sequence (CDS)

ATGGGTTCCTGCGTTTCGATCCACAGAAATTCCGATTCCGCCGTGAAATTCAAACTGAATGAAATGGCGATTCCGCCGTCGCCGATCAAAGATACCATCGCTCCGATCAACGGCGGCGCTGGCGGCGTCTTTGTCAAATCTCAGAAATCCCCTTCTCAAATGGGTAGCAAAGATGAAGCGTTTTTTGATTCCCGAGGTTGGTTGGACTCAGATTGCGAAGATGATTTCTACAGTGTGGGTGATTTCACCCCTTCACGGGAAAATACTCCGGTACACGGCAGTTTCACCTCCGGTACTCCACGAATCAACCAAGTTCATGTCATTGACGATCGAACTCCGGTCGCTATTCCGGAACCATCGCCTACTGGAAAGAAGAAGCTGGCTGAACTTTTCAGGGAGAGCTCCAGAAATGGCACAAGCATACAAGCCAAGCCAACTCTAAACGAACTCGCTCTGCAGTCGAATCCCGAAACGCCTTACATTTCGGGAACAAACTCCGTATGTAGTAGCGAGAGGACTCCAAATGGAAATGTCTGGATTGAGAAGGAGAGGGCATTGAGATCTACACCATGCTGCCTTCCAAACTTGGGATCATGTGGTAGCTTCGGCGACCGAAGGAAGAAGACGAGTCCCACCATAGCTGTATAA

Protein sequence

MGSCVSIHRNSDSAVKFKLNEMAIPPSPIKDTIAPINGGAGGVFVKSQKSPSQMGSKDEAFFDSRGWLDSDCEDDFYSVGDFTPSRENTPVHGSFTSGTPRINQVHVIDDRTPVAIPEPSPTGKKKLAELFRESSRNGTSIQAKPTLNELALQSNPETPYISGTNSVCSSERTPNGNVWIEKERALRSTPCCLPNLGSCGSFGDRRKKTSPTIAV
Homology
BLAST of Sed0018875 vs. NCBI nr
Match: XP_038901054.1 (uncharacterized protein At3g27210-like [Benincasa hispida])

HSP 1 Score: 349.7 bits (896), Expect = 1.7e-92
Identity = 176/222 (79.28%), Postives = 188/222 (84.68%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAVKFKL------NEMAIPPSPIKDTIAPINGGAGGVFVKSQKSPSQM 60
           MGSC SIHRNSDSA+KF+L      N+M IPPSPIKD   PIN     +F KSQ SPS +
Sbjct: 1   MGSCASIHRNSDSAMKFRLSLASKTNDMPIPPSPIKDNNTPIN---ASLFPKSQTSPSHL 60

Query: 61  GSKDEAFFDSRGWLDSDCEDDFYSV-GDFTPSRENTPVHGSFTSGTPRINQVHVIDDRTP 120
           GSKDEAFFDSRGWLDSDCEDDFYSV GDFTPSR NTPVH SF+ GTPRINQVHV+DDRTP
Sbjct: 61  GSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSFGTPRINQVHVVDDRTP 120

Query: 121 VAIPEPSPTGKKKLAELFRESSRNGTSIQAKPTLNELALQSNPETPYISGTNSVCSSERT 180
           +AIPEPSPTGKKKLA+LFRESSRNGT IQAKPTLNELALQSNPETPY+SGTNSVCSSERT
Sbjct: 121 IAIPEPSPTGKKKLADLFRESSRNGTDIQAKPTLNELALQSNPETPYMSGTNSVCSSERT 180

Query: 181 PNGNVWIEKERALRSTPCCLPNLGSCGSFGDRRKKTSPTIAV 216
           PNG+V  EKER   S  CCLP+LGSC SFGDRRKK SP IAV
Sbjct: 181 PNGDVLSEKERPFGSVQCCLPSLGSCRSFGDRRKKASPAIAV 219

BLAST of Sed0018875 vs. NCBI nr
Match: XP_011651566.1 (uncharacterized protein At3g27210 isoform X1 [Cucumis sativus])

HSP 1 Score: 345.1 bits (884), Expect = 4.3e-91
Identity = 175/222 (78.83%), Postives = 186/222 (83.78%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAVKFKLN------EMAIPPSPIKDTIAPINGGAGGVFVKSQKSPSQM 60
           MGSC SIHRN DSA+KFKL+      +M IPPSPIK    PIN     VF+KSQ SPS +
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPIN---PTVFLKSQTSPSHL 60

Query: 61  GSKDEAFFDSRGWLDSDCEDDFYSV-GDFTPSRENTPVHGSFTSGTPRINQVHVIDDRTP 120
           GSKDEAFFDSRGWLDSDCEDDFYSV GDFTPSR NTPVH SF+SGTPRINQVH IDD+TP
Sbjct: 61  GSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTP 120

Query: 121 VAIPEPSPTGKKKLAELFRESSRNGTSIQAKPTLNELALQSNPETPYISGTNSVCSSERT 180
           + IPEPSPTGKK+LAELFRESSRNGT  QAKPTLNELALQSNPETPYISGTNSVCSSERT
Sbjct: 121 ITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERT 180

Query: 181 PNGNVWIEKERALRSTPCCLPNLGSCGSFGDRRKKTSPTIAV 216
           PNG+VW EKER   S  CCLP+LGSC SFGDRRKK SP IAV
Sbjct: 181 PNGDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219

BLAST of Sed0018875 vs. NCBI nr
Match: XP_008450086.1 (PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo])

HSP 1 Score: 343.6 bits (880), Expect = 1.2e-90
Identity = 174/222 (78.38%), Postives = 184/222 (82.88%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAVKFKL------NEMAIPPSPIKDTIAPINGGAGGVFVKSQKSPSQM 60
           MGSC SIHRN DSA+KFKL      N+MAIPPSPIK    PIN     VF KSQ SPS +
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTNDMAIPPSPIKQNNTPIN---PTVFHKSQTSPSHL 60

Query: 61  GSKDEAFFDSRGWLDSDCEDDFYSV-GDFTPSRENTPVHGSFTSGTPRINQVHVIDDRTP 120
           GSKDEAFFDSRGWLDSDCEDDFYSV GDFTPSR NTP H SF+SGTPRINQVH IDD+TP
Sbjct: 61  GSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPTHSSFSSGTPRINQVHGIDDQTP 120

Query: 121 VAIPEPSPTGKKKLAELFRESSRNGTSIQAKPTLNELALQSNPETPYISGTNSVCSSERT 180
           + IPEPSPTGKKKLA+LFRESSRNGT  QAKPTLNELALQSNPETPY+SGTNSVCSSERT
Sbjct: 121 ITIPEPSPTGKKKLADLFRESSRNGTDRQAKPTLNELALQSNPETPYVSGTNSVCSSERT 180

Query: 181 PNGNVWIEKERALRSTPCCLPNLGSCGSFGDRRKKTSPTIAV 216
           PNG+VW EKER   S  CCLP+L SC SFGDRRKK SP IAV
Sbjct: 181 PNGDVWAEKERPFGSVQCCLPSLRSCHSFGDRRKKASPAIAV 219

BLAST of Sed0018875 vs. NCBI nr
Match: KAG6581091.1 (hypothetical protein SDJN03_21093, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 341.7 bits (875), Expect = 4.7e-90
Identity = 174/225 (77.33%), Postives = 187/225 (83.11%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAVKFKL------NEMAIPPSPIKDTIAPINGGA---GGVFVKSQKSP 60
           MGSCVSIHRNSDSAVKF+L      N + IPPSPIKD   PI G     GGVFVKSQ SP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SQMGSKDEAFFDSRGWLDSDCEDDFYSV-GDFTPSRENTPVHGSFTSGTPRINQVHVIDD 120
           S  GSKDEAFF+SRGWLDSDCEDDFYSV GDFTPSR NTPV  SF+SGTPR+NQVHV+DD
Sbjct: 61  SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVVDD 120

Query: 121 RTPVAIPEPSPTGKKKLAELFRESSRNGTSIQAKPTLNELALQSNPETPYISGTNSVCSS 180
            TP+A+P+PSPTGKKKLAELFR+SSRNGT IQ KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTPNGNVWIEKERALRSTPCCLPNLGSCGSFGDRRKKTSPTIAV 216
           ERT NG+VWIEKER   S  CCLP+LGS  SF DRRKK SP IAV
Sbjct: 181 ERTSNGDVWIEKERRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV 225

BLAST of Sed0018875 vs. NCBI nr
Match: XP_023529186.1 (uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340.9 bits (873), Expect = 8.1e-90
Identity = 176/226 (77.88%), Postives = 188/226 (83.19%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAVKFKL------NEMAIPPSPIKDTIAPINGGA---GGVFVKSQKSP 60
           MGSCVSIHRNSDSAVKF+L      N + IPPSPIKD   PI G     GGVFVKSQ SP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SQMGSKDEAFFDSRGWLDSDCEDDFYSV-GDFTPSRENTPVHGSFTSGTPRINQVHVIDD 120
           S  GSKDEAFFDSRGWLDSDCEDDFYSV GDFTPSR NTPV  SF+SGTPRINQVHV+DD
Sbjct: 61  SHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVDD 120

Query: 121 RTPVAIPEPSPTGKKKLAELFRESSRNGTSIQAKPTLNELALQSNPETPYISGTNSVCSS 180
            TP+A+P+PSPTGKKKLAELFR+SSRNGT IQ KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTPN-GNVWIEKERALRSTPCCLPNLGSCGSFGDRRKKTSPTIAV 216
           ERT N G+VWIEKE+   S  CCLP+LGS  SFGDRRKK SP IAV
Sbjct: 181 ERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDRRKKASPAIAV 226

BLAST of Sed0018875 vs. ExPASy Swiss-Prot
Match: Q9LK32 (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-20
Identity = 85/203 (41.87%), Postives = 101/203 (49.75%), Query Frame = 0

Query: 27  SPIKDTIAPINGGAGGV-----FVKSQKSPSQMGSKDEAFFDSRGWLDSDCEDDFYSV-G 86
           SP K T  P N     V     F  S+KS    GSKDE FFDS+ WL SD +DDF+SV G
Sbjct: 49  SPRKSTSIPANNNLTPVKSRWSFSSSKKS---FGSKDETFFDSQPWLQSDSDDDFHSVNG 108

Query: 87  DFTPSRENTPVHGSFTSGTPRINQVHVIDDRTPVAIPEPSP-TGKKKLAELFRESSRNGT 146
           DFTPS  NTP   SF+   PR + +   + +       P+P   +KKL ELFR+S R   
Sbjct: 109 DFTPSLGNTP-KSSFSDRPPRFHNLIFHEKKPSRGSSSPAPLPRRKKLGELFRDSIRE-- 168

Query: 147 SIQAKPTLNELALQSNPETPYISGTNSVCSSERTPNGNVWIEKERALRST---PCCLPNL 206
                    E    S   TPY+SG NS     R  N    IEKE   +S      CLP  
Sbjct: 169 ------EREESGSSSAISTPYLSGANS-----REFNDTA-IEKEEKKKSNWHHHRCLPGF 228

Query: 207 GSC-GSFGDRRKKTS---PTIAV 216
            SC GSF +RRKK S   P +AV
Sbjct: 229 SSCGGSFMERRKKMSSETPVVAV 233

BLAST of Sed0018875 vs. ExPASy TrEMBL
Match: A0A0A0LB55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588480 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.1e-91
Identity = 175/222 (78.83%), Postives = 186/222 (83.78%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAVKFKLN------EMAIPPSPIKDTIAPINGGAGGVFVKSQKSPSQM 60
           MGSC SIHRN DSA+KFKL+      +M IPPSPIK    PIN     VF+KSQ SPS +
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPIN---PTVFLKSQTSPSHL 60

Query: 61  GSKDEAFFDSRGWLDSDCEDDFYSV-GDFTPSRENTPVHGSFTSGTPRINQVHVIDDRTP 120
           GSKDEAFFDSRGWLDSDCEDDFYSV GDFTPSR NTPVH SF+SGTPRINQVH IDD+TP
Sbjct: 61  GSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDDQTP 120

Query: 121 VAIPEPSPTGKKKLAELFRESSRNGTSIQAKPTLNELALQSNPETPYISGTNSVCSSERT 180
           + IPEPSPTGKK+LAELFRESSRNGT  QAKPTLNELALQSNPETPYISGTNSVCSSERT
Sbjct: 121 ITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSSERT 180

Query: 181 PNGNVWIEKERALRSTPCCLPNLGSCGSFGDRRKKTSPTIAV 216
           PNG+VW EKER   S  CCLP+LGSC SFGDRRKK SP IAV
Sbjct: 181 PNGDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219

BLAST of Sed0018875 vs. ExPASy TrEMBL
Match: A0A1S3BP47 (uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103491777 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 6.0e-91
Identity = 174/222 (78.38%), Postives = 184/222 (82.88%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAVKFKL------NEMAIPPSPIKDTIAPINGGAGGVFVKSQKSPSQM 60
           MGSC SIHRN DSA+KFKL      N+MAIPPSPIK    PIN     VF KSQ SPS +
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTNDMAIPPSPIKQNNTPIN---PTVFHKSQTSPSHL 60

Query: 61  GSKDEAFFDSRGWLDSDCEDDFYSV-GDFTPSRENTPVHGSFTSGTPRINQVHVIDDRTP 120
           GSKDEAFFDSRGWLDSDCEDDFYSV GDFTPSR NTP H SF+SGTPRINQVH IDD+TP
Sbjct: 61  GSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPTHSSFSSGTPRINQVHGIDDQTP 120

Query: 121 VAIPEPSPTGKKKLAELFRESSRNGTSIQAKPTLNELALQSNPETPYISGTNSVCSSERT 180
           + IPEPSPTGKKKLA+LFRESSRNGT  QAKPTLNELALQSNPETPY+SGTNSVCSSERT
Sbjct: 121 ITIPEPSPTGKKKLADLFRESSRNGTDRQAKPTLNELALQSNPETPYVSGTNSVCSSERT 180

Query: 181 PNGNVWIEKERALRSTPCCLPNLGSCGSFGDRRKKTSPTIAV 216
           PNG+VW EKER   S  CCLP+L SC SFGDRRKK SP IAV
Sbjct: 181 PNGDVWAEKERPFGSVQCCLPSLRSCHSFGDRRKKASPAIAV 219

BLAST of Sed0018875 vs. ExPASy TrEMBL
Match: A0A6J1EK04 (uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC111435186 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.9e-89
Identity = 174/234 (74.36%), Postives = 191/234 (81.62%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAVKFKL------NEMAIPPSPIKDTIAPIN-----------GGAGGV 60
           MGSCVSIHRNSDSA+KF+L      NEM IPPSPIKD  A I+           GG GGV
Sbjct: 1   MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAGGAGGVDGEGGVGGV 60

Query: 61  FVKSQKSPSQMGSKDEAFFDSRGWLDSDCEDDFYSV-GDFTPSRENTPVHGSFTSGTPRI 120
           FVKSQ+SPSQ+GSKDEAFFDSRGWLDSDCEDDFYSV GDFTPSR NTPVH SF+SGTPRI
Sbjct: 61  FVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSGTPRI 120

Query: 121 NQVHVIDDRTPVAIPEPSPTGKKKLAELFRESSRNGTSIQAKPTLNELALQSNPETPYIS 180
           NQVHVID++TP+A+PEPSPTGKKKLAELFR+SSR  + IQAKPTLNELALQSNPE P++S
Sbjct: 121 NQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKPHVS 180

Query: 181 GTNSVC-SSERTPNGNVWIEKERALRSTPCCLPNLGSCGSFGDRRKKTSPTIAV 216
            TNSVC SSERT NG+VW EKER + S  CCLP+LG C SFGDRRKK  P I V
Sbjct: 181 RTNSVCSSSERTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKARPAIVV 234

BLAST of Sed0018875 vs. ExPASy TrEMBL
Match: A0A6J1J5K2 (uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC111481493 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 4.3e-89
Identity = 174/226 (76.99%), Postives = 188/226 (83.19%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAVKFKL------NEMAIPPSPIKDTIAPINGGA---GGVFVKSQKSP 60
           MGSCVSIHRNSDSAVKF+L      N + IPPSPIKD   PI G     GGVFVKSQ SP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SQMGSKDEAFFDSRGWLDSDCEDDFYSV-GDFTPSRENTPVHGSFTSGTPRINQVHVIDD 120
           S  GSKD+AFFDSRGWLDSDCEDDFYSV GDFTPS+ NTPV  SF+SGTPRINQVHV++D
Sbjct: 61  SHFGSKDDAFFDSRGWLDSDCEDDFYSVNGDFTPSQGNTPVRTSFSSGTPRINQVHVVND 120

Query: 121 RTPVAIPEPSPTGKKKLAELFRESSRNGTSIQAKPTLNELALQSNPETPYISGTNSVCSS 180
            TP+A+P+PSPTGKKKLAELFR+SSRNGT IQ KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTEIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTPN-GNVWIEKERALRSTPCCLPNLGSCGSFGDRRKKTSPTIAV 216
           ERT N G+VWIEKER   S  CCLP+LGS  SFGDRRKK SP IAV
Sbjct: 181 ERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSFGDRRKKASPAIAV 226

BLAST of Sed0018875 vs. ExPASy TrEMBL
Match: A0A6J1F463 (uncharacterized protein At3g27210 OS=Cucurbita moschata OX=3662 GN=LOC111442001 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 4.8e-88
Identity = 172/226 (76.11%), Postives = 186/226 (82.30%), Query Frame = 0

Query: 1   MGSCVSIHRNSDSAVKFKL------NEMAIPPSPIKDTIAPINGGA---GGVFVKSQKSP 60
           MGSCVSIHRNSDSAVKF+L      N + IPPSPIKD   PI G     GGVFVKSQ SP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SQMGSKDEAFFDSRGWLDSDCEDDFYSV-GDFTPSRENTPVHGSFTSGTPRINQVHVIDD 120
           S  GSKDEAFF+SRGWLDSDCEDDFYSV GDFTPSR NTPV  SF+SGTPR+NQVHV+DD
Sbjct: 61  SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVLDD 120

Query: 121 RTPVAIPEPSPTGKKKLAELFRESSRNGTSIQAKPTLNELALQSNPETPYISGTNSVCSS 180
            TP+ +P+PSPTGKKKLAELFR+SSRNGT IQ KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 LTPIVMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTPN-GNVWIEKERALRSTPCCLPNLGSCGSFGDRRKKTSPTIAV 216
           ERT N G+VWIEKE+   S  CCLP+LGS  SF DRRKK SP IAV
Sbjct: 181 ERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV 226

BLAST of Sed0018875 vs. TAIR 10
Match: AT3G27210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). )

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-21
Identity = 85/203 (41.87%), Postives = 101/203 (49.75%), Query Frame = 0

Query: 27  SPIKDTIAPINGGAGGV-----FVKSQKSPSQMGSKDEAFFDSRGWLDSDCEDDFYSV-G 86
           SP K T  P N     V     F  S+KS    GSKDE FFDS+ WL SD +DDF+SV G
Sbjct: 49  SPRKSTSIPANNNLTPVKSRWSFSSSKKS---FGSKDETFFDSQPWLQSDSDDDFHSVNG 108

Query: 87  DFTPSRENTPVHGSFTSGTPRINQVHVIDDRTPVAIPEPSP-TGKKKLAELFRESSRNGT 146
           DFTPS  NTP   SF+   PR + +   + +       P+P   +KKL ELFR+S R   
Sbjct: 109 DFTPSLGNTP-KSSFSDRPPRFHNLIFHEKKPSRGSSSPAPLPRRKKLGELFRDSIRE-- 168

Query: 147 SIQAKPTLNELALQSNPETPYISGTNSVCSSERTPNGNVWIEKERALRST---PCCLPNL 206
                    E    S   TPY+SG NS     R  N    IEKE   +S      CLP  
Sbjct: 169 ------EREESGSSSAISTPYLSGANS-----REFNDTA-IEKEEKKKSNWHHHRCLPGF 228

Query: 207 GSC-GSFGDRRKKTS---PTIAV 216
            SC GSF +RRKK S   P +AV
Sbjct: 229 SSCGGSFMERRKKMSSETPVVAV 233

BLAST of Sed0018875 vs. TAIR 10
Match: AT3G01860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.7 bits (221), Expect = 3.0e-18
Identity = 83/233 (35.62%), Postives = 109/233 (46.78%), Query Frame = 0

Query: 1   MGSCVSIHRN-----SDSAVK---FKLNEMAIPP--SPIKDTIAPINGGAGGVFVKSQKS 60
           MGSCVS  ++     SDS VK   F     + PP  + +  T + ING      + S + 
Sbjct: 1   MGSCVSSSQSKSSSASDSVVKLASFISKPDSTPPLKTDVMITSSTINGNPP---IDSGRW 60

Query: 61  PSQMGSKDEAFFDSRGWLDSDCEDDFYSV-GDFTPSRENTPVHGSFTSGTPRINQVHVID 120
            S    +D  FFDSRGWLDSDC+DDF SV G+FTPSR  TPVH  F   TP   +    +
Sbjct: 61  DSG-NKEDMIFFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTPHQGE----E 120

Query: 121 DRTPVAIPEPSPT-GKKKLAELFRESSRNGTSIQAKPTLNELALQSNPETPYIS-GTNSV 180
           ++      E SPT  KK+L ELF+E+                  +   E  Y++ G    
Sbjct: 121 NKHGEEEEEASPTDNKKRLLELFKETQDE---------------EDEEEEDYVAEGKARA 180

Query: 181 CSSERTP-----------NGNVWIEKERALRSTPC--CLPNLGSCGSFGDRRK 208
           C   RTP           N     +K + +RS     C+P L SC SF DRR+
Sbjct: 181 CLWIRTPVRSSAPATPYNNNKERQQKFKRVRSAALGRCVPRLVSCSSFTDRRR 210

BLAST of Sed0018875 vs. TAIR 10
Match: AT3G01860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 2.8e-16
Identity = 62/163 (38.04%), Postives = 79/163 (48.47%), Query Frame = 0

Query: 61  FFDSRGWLDSDCEDDFYSV-GDFTPSRENTPVHGSFTSGTPRINQVHVIDDRTPVAIPEP 120
           FFDSRGWLDSDC+DDF SV G+FTPSR  TPVH  F   TP   +    +++      E 
Sbjct: 3   FFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTPHQGE----ENKHGEEEEEA 62

Query: 121 SPT-GKKKLAELFRESSRNGTSIQAKPTLNELALQSNPETPYIS-GTNSVCSSERTP--- 180
           SPT  KK+L ELF+E+                  +   E  Y++ G    C   RTP   
Sbjct: 63  SPTDNKKRLLELFKETQDE---------------EDEEEEDYVAEGKARACLWIRTPVRS 122

Query: 181 --------NGNVWIEKERALRSTPC--CLPNLGSCGSFGDRRK 208
                   N     +K + +RS     C+P L SC SF DRR+
Sbjct: 123 SAPATPYNNNKERQQKFKRVRSAALGRCVPRLVSCSSFTDRRR 146

BLAST of Sed0018875 vs. TAIR 10
Match: AT5G40860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-14
Identity = 69/204 (33.82%), Postives = 94/204 (46.08%), Query Frame = 0

Query: 24  IPPSPIKDTIAPI-------NGGAGGVFVKSQKSPSQM---GSKDEAFFDSRGWLDSDCE 83
           I  SP+K+ +AP+       NG +  V  +   S S+     SKDE +FDS  W  SD E
Sbjct: 47  ISESPVKENLAPVATPKTVDNGLSAQVKSRWSFSSSKRSFGSSKDETYFDSHQWQQSDSE 106

Query: 84  DDFYSV-GDFTPSRENTPVHGSFTSGTPRINQVHVIDDRTPVAIPEPSPTGKKKLAELFR 143
           DDFYSV GDFTPS  NTP   S +   PRI+      ++  V+        +KKL ELFR
Sbjct: 107 DDFYSVRGDFTPSVGNTP-RCSISEKLPRIHSPLFEGEKPRVSFSHSPAPRRKKLGELFR 166

Query: 144 ESSRNGTSIQAKPTLNELALQSNPETPYISGTNSVCSSERTPNGNVWIEKERALRSTPCC 203
           +S R   ++  + +    + +S   +   SG   V         N+    +  L     C
Sbjct: 167 DSIREERAVILEESSEYQSEKSKKSSCDNSGELKVIEESVKEKKNL----KSPLNYHHRC 226

Query: 204 LPNLGSC-GSFGDRRKKTSPTIAV 216
           LP   S  GS  D+RKK    I V
Sbjct: 227 LPRFSSFKGSLMDKRKKKKKKIHV 245

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038901054.11.7e-9279.28uncharacterized protein At3g27210-like [Benincasa hispida][more]
XP_011651566.14.3e-9178.83uncharacterized protein At3g27210 isoform X1 [Cucumis sativus][more]
XP_008450086.11.2e-9078.38PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo][more]
KAG6581091.14.7e-9077.33hypothetical protein SDJN03_21093, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023529186.18.1e-9077.88uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q9LK323.1e-2041.87Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV... [more]
Match NameE-valueIdentityDescription
A0A0A0LB552.1e-9178.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588480 PE=4 SV=1[more]
A0A1S3BP476.0e-9178.38uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103491777 P... [more]
A0A6J1EK041.9e-8974.36uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC11143... [more]
A0A6J1J5K24.3e-8976.99uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC1114814... [more]
A0A6J1F4634.8e-8876.11uncharacterized protein At3g27210 OS=Cucurbita moschata OX=3662 GN=LOC111442001 ... [more]
Match NameE-valueIdentityDescription
AT3G27210.12.2e-2141.87unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
AT3G01860.13.0e-1835.62unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
AT3G01860.22.8e-1638.04unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
AT5G40860.11.2e-1433.82unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038947At3g27210-likePANTHERPTHR34280OS01G0920100 PROTEINcoord: 1..212
NoneNo IPR availablePANTHERPTHR34280:SF2OS01G0920100 PROTEINcoord: 1..212

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0018875.1Sed0018875.1mRNA