Sed0018875 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCACCTTTAATCATATGAAGTCAAAATCCTCCATTGCTAGTTTTGAAGGTTCATCCTCCATTCACACAACATTCATTTCAATTACAGTTTTGCCCAATTCTTCTCTCTCTCTCTCTCTCTCATTGGTTTCTCTTTCCATTACAACTTTTCCACTCCCCTCAACAAATAACCCCAACAATCATCCTCTCTTTCCCACTTTTTCTCTGCTCCATTTCCCTCTCTCTCTAAAAACCCATTTCCAATCCTCCATTTTCAGTCCCTCATGATCAAAGTTTTATCAATCTAAGTGACAAACAATCAAAATCATTGATGGGTTCCTGCGTTTCGATCCACAGAAATTCCGATTCCGCCGTGAAATTCAAACTGAATGAAATGGCGATTCCGCCGTCGCCGATCAAAGATACCATCGCTCCGATCAACGGCGGCGCTGGCGGCGTCTTTGTCAAATCTCAGAAATCCCCTTCTCAAATGGGTATTGCTTGTTTCTTCTTCTTATTGACTCTGTTGCTGTGTAATCGGGGGTTTTTTTTTTGTTTTGTTCTTATGAGATATGCGTTTTGTTTCTGTTGAGTGATGAACTTTGATGCTTTGGAATCGGTTCTAAGCATGATTTTGGTTCGTTTTACTCTACTGATCTTTAGAAGCAAAGTTATGTGCGATCTAAAGTGTTTTTGGTTCTTGCGTGTTCCTTTGATTTGACTTTGATTGGTTTTATTTCTAAGCATATTTCCTTTTTTCTAATTCAGTGTCTTATTTAATCATTCACTTTTGGACATATTGTTTAGTTGGAATGATAAAGTTAATCTAGGTCCCATCTCTGTATTATATTATTATTTTAGACTGAGAAACCAATCTCTTTTCCAATGTAAATCTTCAGAGATTAATAATTGTTCATTAAAATTGGTGTAATCCCTGATTTCCTTTCTGTCTCTTGTGGCTTGATGATCAAATTTTGAGAAGGGATTGGGATTGTTCTGGGTACTGAAACAGAGAAATATTTTCTTTCTTCAGTGAAGTTTGTTGATGGTGCTTGATTTGAACTGTCTAATAGAGCTTTGTTACTTTTTATGGGTCAGATTTGTTTAATGATTATGGAAGGTTTGATCATATTGTAGCAATGATATCAAATAATTTTTCGATACCTTTGTGGCTTATTTTTAGTCCAACAATATTTGAAGTGGGAATTTGAACTCATGACCGGTAGATCGTAAGGACACATTTTGTTCATTATGCTCTTGTTAGCAACACCTTTATGCGATCCGGGTGTTCAACCATCAAATAAGGGATTGTTTCCTTTGAGGCAATGGGATTTTCAGGAATCAATTGCCTTGTATAGTCTTTGTTAGAGAAAGGAGAAAAGGATGGATGAAAGCAAGACTTCTCTACCCTCAAGGGGCAACTTCGTTGGTTAAGGGTTGAGTCTTTCAACGCATGTTTCTTTGGAGGTCTAAAGTTCAAGTCCCACGAGTTAGCTTAATTGTAAAATCCTTTGTTGTTTCCTTGATCCGAGTCTTGGGACTGGCGCGGGTGCCCCTTGCCGATTTTATAAAAAAAAAGACTTCTCTTCTCCATTCCTTCGATGTGTCCGGATGCCGGACTTGGGGATGGGCATGGTTACCCTGGTTATAGTGGAGTGAAATTCCGATTTCCCAGTTTAGAAAAAAGATCTCTTCATAGAATTTCTTAGCAGAAGTGCTTCCTGTTCTTGGACTTCTTTCATAACTTACAAGGATGTTGTAACTGAGTTCCATTGTGAACTTCACATATTTATTTACTCATCGTTTCTATGCTTGGAGTTTCAAACTTTACTAACATGATATGGTGACACAAATCCATTATTACTGAACTCAAATGGTCTAGGCTGTGAATTGTCTAGGCTGCTATTAGAACTTCTTCACATTTTTTTGTCTTTTTCTTATATTTTTTAGTATTCGATGACTATTCTCACAAGACAATTACTTATTCTTGTTACATTTAGTTGTTAAGATAACTTGTATGGTTTAAATCTAAGATATATAGTCATTATGACTTAGAACTTATTCGAGCTCTTTATGATTTATCTGGTTCTTCCTGATTACTAAGTCAACTCGTGATGATTATTTCTCGTATGTACTGGCATAGTGAGTTTTTTTTTTCTGTCCATGACTTTTTTGAAAGAGTTTTTCACAGAAGTCCAGGTGTTCTATACAAGTTCATTAACTCGTGAAACAGAACGTACATCGAAATCAAATTTTAGTACATCATTCTTTTGTTTTCCATCTCATTTCTTCGTATCGAATTTGAAATGGCTAATCAATGAAAGAAGCAAGTTGACAATGGAGCTGTTTTCATAGGTAGCAAAGATGAAGCGTTTTTTGATTCCCGAGGTTGGTTGGACTCAGATTGCGAAGATGATTTCTACAGTGTGGGTGGTAAGTAGATGTTTGAATTTTGAGTTAAATTTCAAGTTTAGTTCTTACACTTTAACGTCTCTATTCAGTAGATTCTTCAACTTAAAAAAGTATTTATTAAGCGCTTAAACTTTAAAAAGGCCTAATACATTTTTAAACTTCTAAAGAGTGTTGAACAAACTAGGGATCTATTAGGTTCAAAATAGAAAGTTGATTTTGAAGTTATGGGACCTATTAGATACAAATTGAATGATGAGAGATCTACCGGCTACTTTTTAAAGTTCAAGAGCCTATTCGACACGTCCCCGTGGAGTGGGTGTGGTGGTCGAAGATTTGGACTTTGAAAGTATGCTCCCTTTAAGGTCCTAGGTTCGACCACTTGTGACATTAATTTGTAGACACTTCTCGTGTCTTCATTCCTTCGATGTCTCCTGATGCCTGATCTAGGGACGTGCGTGGAACAAATATGAAAGTTTATGCTAATGGCTTTTTTATTTTATTTTTAATCTCCTCTCCGGAAGTATTTAATGACGATGCTTGCAGATTTCACCCCTTCACGGGAAAATACTCCGGTACACGGCAGTTTCACCTCCGGTACTCCACGAATCAACCAAGTTCATGTCATTGACGATCGAACTCCGGTCGCTATTCCGGAACCATCGCCTACTGGAAAGAAGAAGCTGGCTGAACTTTTCAGGGAGAGCTCCAGAAATGGCACAAGCATACAAGCCAAGCCAACTCTAAACGAACTCGCTCTGCAGTCGAATCCCGAAACGCCTTACATTTCGGGAACAAACTCCGTATGTAGTAGCGAGAGGACTCCAAATGGAAATGTCTGGATTGAGAAGGAGAGGGCATTGAGATCTACACCATGCTGCCTTCCAAACTTGGGATCATGTGGTAGCTTCGGCGACCGAAGGAAGAAGACGAGTCCCACCATAGCTGTATAAAGCAAGGTTCGATCAAACTCGCTGTAAGACTAAATTCGTTCTGATTCTGAGATTGTGAGGCTTCAAAGCTTATGGAACTCACATTTGTTCAGAAATGTGTAAAGTTCTGAAATATCAGATACAGATGCAGCATCAATAATCTCAAGAGATAATGTTGTTGATGAAGCCAATGGTTTCTCTCATATATATATATATTAGATTCTTACTTCATAGTACGTTGTCTCCTATCAAGATTAGTTTGTATTTGGTTTTACATTTGTAAGCCTATATCCTCTATAATATTAGTTTTTCTTAATTCTCGTTGTTATTTTGTAAGATGATTGTTAAATAGATAATAATAATAATAAAAATAAAT TCCACCTTTAATCATATGAAGTCAAAATCCTCCATTGCTAGTTTTGAAGGTTCATCCTCCATTCACACAACATTCATTTCAATTACAGTTTTGCCCAATTCTTCTCTCTCTCTCTCTCTCTCATTGGTTTCTCTTTCCATTACAACTTTTCCACTCCCCTCAACAAATAACCCCAACAATCATCCTCTCTTTCCCACTTTTTCTCTGCTCCATTTCCCTCTCTCTCTAAAAACCCATTTCCAATCCTCCATTTTCAGTCCCTCATGATCAAAGTTTTATCAATCTAAGTGACAAACAATCAAAATCATTGATGGGTTCCTGCGTTTCGATCCACAGAAATTCCGATTCCGCCGTGAAATTCAAACTGAATGAAATGGCGATTCCGCCGTCGCCGATCAAAGATACCATCGCTCCGATCAACGGCGGCGCTGGCGGCGTCTTTGTCAAATCTCAGAAATCCCCTTCTCAAATGGGTAGCAAAGATGAAGCGTTTTTTGATTCCCGAGGTTGGTTGGACTCAGATTGCGAAGATGATTTCTACAGTGTGGGTGATTTCACCCCTTCACGGGAAAATACTCCGGTACACGGCAGTTTCACCTCCGGTACTCCACGAATCAACCAAGTTCATGTCATTGACGATCGAACTCCGGTCGCTATTCCGGAACCATCGCCTACTGGAAAGAAGAAGCTGGCTGAACTTTTCAGGGAGAGCTCCAGAAATGGCACAAGCATACAAGCCAAGCCAACTCTAAACGAACTCGCTCTGCAGTCGAATCCCGAAACGCCTTACATTTCGGGAACAAACTCCGTATGTAGTAGCGAGAGGACTCCAAATGGAAATGTCTGGATTGAGAAGGAGAGGGCATTGAGATCTACACCATGCTGCCTTCCAAACTTGGGATCATGTGGTAGCTTCGGCGACCGAAGGAAGAAGACGAGTCCCACCATAGCTGTATAAAGCAAGGTTCGATCAAACTCGCTGTAAGACTAAATTCGTTCTGATTCTGAGATTGTGAGGCTTCAAAGCTTATGGAACTCACATTTGTTCAGAAATGTGTAAAGTTCTGAAATATCAGATACAGATGCAGCATCAATAATCTCAAGAGATAATGTTGTTGATGAAGCCAATGGTTTCTCTCATATATATATATATTAGATTCTTACTTCATAGTACGTTGTCTCCTATCAAGATTAGTTTGTATTTGGTTTTACATTTGTAAGCCTATATCCTCTATAATATTAGTTTTTCTTAATTCTCGTTGTTATTTTGTAAGATGATTGTTAAATAGATAATAATAATAATAAAAATAAAT ATGGGTTCCTGCGTTTCGATCCACAGAAATTCCGATTCCGCCGTGAAATTCAAACTGAATGAAATGGCGATTCCGCCGTCGCCGATCAAAGATACCATCGCTCCGATCAACGGCGGCGCTGGCGGCGTCTTTGTCAAATCTCAGAAATCCCCTTCTCAAATGGGTAGCAAAGATGAAGCGTTTTTTGATTCCCGAGGTTGGTTGGACTCAGATTGCGAAGATGATTTCTACAGTGTGGGTGATTTCACCCCTTCACGGGAAAATACTCCGGTACACGGCAGTTTCACCTCCGGTACTCCACGAATCAACCAAGTTCATGTCATTGACGATCGAACTCCGGTCGCTATTCCGGAACCATCGCCTACTGGAAAGAAGAAGCTGGCTGAACTTTTCAGGGAGAGCTCCAGAAATGGCACAAGCATACAAGCCAAGCCAACTCTAAACGAACTCGCTCTGCAGTCGAATCCCGAAACGCCTTACATTTCGGGAACAAACTCCGTATGTAGTAGCGAGAGGACTCCAAATGGAAATGTCTGGATTGAGAAGGAGAGGGCATTGAGATCTACACCATGCTGCCTTCCAAACTTGGGATCATGTGGTAGCTTCGGCGACCGAAGGAAGAAGACGAGTCCCACCATAGCTGTATAA MGSCVSIHRNSDSAVKFKLNEMAIPPSPIKDTIAPINGGAGGVFVKSQKSPSQMGSKDEAFFDSRGWLDSDCEDDFYSVGDFTPSRENTPVHGSFTSGTPRINQVHVIDDRTPVAIPEPSPTGKKKLAELFRESSRNGTSIQAKPTLNELALQSNPETPYISGTNSVCSSERTPNGNVWIEKERALRSTPCCLPNLGSCGSFGDRRKKTSPTIAV Homology
BLAST of Sed0018875 vs. NCBI nr
Match: XP_038901054.1 (uncharacterized protein At3g27210-like [Benincasa hispida]) HSP 1 Score: 349.7 bits (896), Expect = 1.7e-92 Identity = 176/222 (79.28%), Postives = 188/222 (84.68%), Query Frame = 0
BLAST of Sed0018875 vs. NCBI nr
Match: XP_011651566.1 (uncharacterized protein At3g27210 isoform X1 [Cucumis sativus]) HSP 1 Score: 345.1 bits (884), Expect = 4.3e-91 Identity = 175/222 (78.83%), Postives = 186/222 (83.78%), Query Frame = 0
BLAST of Sed0018875 vs. NCBI nr
Match: XP_008450086.1 (PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo]) HSP 1 Score: 343.6 bits (880), Expect = 1.2e-90 Identity = 174/222 (78.38%), Postives = 184/222 (82.88%), Query Frame = 0
BLAST of Sed0018875 vs. NCBI nr
Match: KAG6581091.1 (hypothetical protein SDJN03_21093, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 341.7 bits (875), Expect = 4.7e-90 Identity = 174/225 (77.33%), Postives = 187/225 (83.11%), Query Frame = 0
BLAST of Sed0018875 vs. NCBI nr
Match: XP_023529186.1 (uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 340.9 bits (873), Expect = 8.1e-90 Identity = 176/226 (77.88%), Postives = 188/226 (83.19%), Query Frame = 0
BLAST of Sed0018875 vs. ExPASy Swiss-Prot
Match: Q9LK32 (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.1e-20 Identity = 85/203 (41.87%), Postives = 101/203 (49.75%), Query Frame = 0
BLAST of Sed0018875 vs. ExPASy TrEMBL
Match: A0A0A0LB55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588480 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 2.1e-91 Identity = 175/222 (78.83%), Postives = 186/222 (83.78%), Query Frame = 0
BLAST of Sed0018875 vs. ExPASy TrEMBL
Match: A0A1S3BP47 (uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103491777 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 6.0e-91 Identity = 174/222 (78.38%), Postives = 184/222 (82.88%), Query Frame = 0
BLAST of Sed0018875 vs. ExPASy TrEMBL
Match: A0A6J1EK04 (uncharacterized protein At3g27210-like OS=Cucurbita moschata OX=3662 GN=LOC111435186 PE=4 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 1.9e-89 Identity = 174/234 (74.36%), Postives = 191/234 (81.62%), Query Frame = 0
BLAST of Sed0018875 vs. ExPASy TrEMBL
Match: A0A6J1J5K2 (uncharacterized protein At3g27210-like OS=Cucurbita maxima OX=3661 GN=LOC111481493 PE=4 SV=1) HSP 1 Score: 337.4 bits (864), Expect = 4.3e-89 Identity = 174/226 (76.99%), Postives = 188/226 (83.19%), Query Frame = 0
BLAST of Sed0018875 vs. ExPASy TrEMBL
Match: A0A6J1F463 (uncharacterized protein At3g27210 OS=Cucurbita moschata OX=3662 GN=LOC111442001 PE=4 SV=1) HSP 1 Score: 334.0 bits (855), Expect = 4.8e-88 Identity = 172/226 (76.11%), Postives = 186/226 (82.30%), Query Frame = 0
BLAST of Sed0018875 vs. TAIR 10
Match: AT3G27210.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40860.1); Has 133 Blast hits to 98 proteins in 25 species: Archae - 0; Bacteria - 6; Metazoa - 32; Fungi - 7; Plants - 70; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). ) HSP 1 Score: 100.1 bits (248), Expect = 2.2e-21 Identity = 85/203 (41.87%), Postives = 101/203 (49.75%), Query Frame = 0
BLAST of Sed0018875 vs. TAIR 10
Match: AT3G01860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 66 Blast hits to 66 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 89.7 bits (221), Expect = 3.0e-18 Identity = 83/233 (35.62%), Postives = 109/233 (46.78%), Query Frame = 0
BLAST of Sed0018875 vs. TAIR 10
Match: AT3G01860.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 64 Blast hits to 64 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 83.2 bits (204), Expect = 2.8e-16 Identity = 62/163 (38.04%), Postives = 79/163 (48.47%), Query Frame = 0
BLAST of Sed0018875 vs. TAIR 10
Match: AT5G40860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27210.1); Has 69 Blast hits to 69 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 77.8 bits (190), Expect = 1.2e-14 Identity = 69/204 (33.82%), Postives = 94/204 (46.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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