Sed0018866 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GACGCGAGTACCCTTCCTTACGCGTTTTCTCCCTTCTTCAAAAACCGCCCTATTTATCCCTTCCATTTTCCCCATTTTGTTCCTTCACTAAAATTCCACCACTCCCAATTTCCATTTCTCTGCAACAAACAACAAACACTCAAACCCCCTTCATTTCAATGGCTTCCTCTGAGAATTTCCTCCCCTCCTTCTCCGACCCATGGGCCCTCCGACCCGCCTTCCAGGACCCATGGATCTCCGACGCCCTCTCCAAAGCCCTCCTCCCGGACTCCCTCTCCTCCTTCCTCGACTCCATCTCCGCCCAATCGCCGCCCCTCTCCGGCGTCTCCGACACCCCCCCGCCTCCGCCGCCGCCCCCAAAACGCCCGAGGCCTTCCATTCCCGCCGCCGCCGGGAAGGCCTCCAACAAGAGGAAGTCCAGAGCCTCCAAGCGGAACCACACCACCTTCATCACCGCCGAACCGGCCAACTTCCGCCACATGGTCCAGCAGGTCACCGGCTTCCGATTCGGAAGCTCCCCGGTCCAGATCGTCCCCCCCGTTTTGAAACCCGAACCGCACCGCCCCGCCCCGCCCCGCCTCTCCGCCGGTCTCCCCACGCTCGACACCTCTGCCCTTTTGCTCCACCACCACACCTCCCGGAGCGGATCTGACATCTCCGGGCCGGGTCAGCTCGAGTTTTCCCCGGGTCTGCCCTACCCGGATCCCGCCCCGGAGTTTGATACCTTTTCGTCTTTTCCCACTCTTGAGTCGTGGAAGCCGGTTTTGTGATGATGGATATTTTCTGCTTTTTTTTTTTTGGAAATTAATATTTTGTTTTTTTTTTTAATTTAGTGGAGGATCTTCTCATATGTAGTAAGATGATGGGGGGTGGATCAAAGGTTGTTTTTGGAAATCGGTGTTTAGTTTAGTGTAATTTAAGTGGTAAATTAATTATTAATCCTACTTTTATTTCATACATTTGCTTAATTTGTTCTTTGTGATGTGTGTGTGTGTGTTTTTTATGGTAATATTGGAATGTTGGGAACTTACGATCTTTCTATTACTTCAATCCATGAAATTGATTCATAATTTTGTTTAGATTATATTGGATGCAATGTACTATGAAAGAAAAAAGGGC GACGCGAGTACCCTTCCTTACGCGTTTTCTCCCTTCTTCAAAAACCGCCCTATTTATCCCTTCCATTTTCCCCATTTTGTTCCTTCACTAAAATTCCACCACTCCCAATTTCCATTTCTCTGCAACAAACAACAAACACTCAAACCCCCTTCATTTCAATGGCTTCCTCTGAGAATTTCCTCCCCTCCTTCTCCGACCCATGGGCCCTCCGACCCGCCTTCCAGGACCCATGGATCTCCGACGCCCTCTCCAAAGCCCTCCTCCCGGACTCCCTCTCCTCCTTCCTCGACTCCATCTCCGCCCAATCGCCGCCCCTCTCCGGCGTCTCCGACACCCCCCCGCCTCCGCCGCCGCCCCCAAAACGCCCGAGGCCTTCCATTCCCGCCGCCGCCGGGAAGGCCTCCAACAAGAGGAAGTCCAGAGCCTCCAAGCGGAACCACACCACCTTCATCACCGCCGAACCGGCCAACTTCCGCCACATGGTCCAGCAGGTCACCGGCTTCCGATTCGGAAGCTCCCCGGTCCAGATCGTCCCCCCCGTTTTGAAACCCGAACCGCACCGCCCCGCCCCGCCCCGCCTCTCCGCCGGTCTCCCCACGCTCGACACCTCTGCCCTTTTGCTCCACCACCACACCTCCCGGAGCGGATCTGACATCTCCGGGCCGGGTCAGCTCGAGTTTTCCCCGGGTCTGCCCTACCCGGATCCCGCCCCGGAGTTTGATACCTTTTCGTCTTTTCCCACTCTTGAGTCGTGGAAGCCGGTTTTGTGATGATGGATATTTTCTGCTTTTTTTTTTTTGGAAATTAATATTTTGTTTTTTTTTTTAATTTAGTGGAGGATCTTCTCATATGTAGTAAGATGATGGGGGGTGGATCAAAGGTTGTTTTTGGAAATCGGTGTTTAGTTTAGTGTAATTTAAGTGGTAAATTAATTATTAATCCTACTTTTATTTCATACATTTGCTTAATTTGTTCTTTGTGATGTGTGTGTGTGTGTTTTTTATGGTAATATTGGAATGTTGGGAACTTACGATCTTTCTATTACTTCAATCCATGAAATTGATTCATAATTTTGTTTAGATTATATTGGATGCAATGTACTATGAAAGAAAAAAGGGC ATGGCTTCCTCTGAGAATTTCCTCCCCTCCTTCTCCGACCCATGGGCCCTCCGACCCGCCTTCCAGGACCCATGGATCTCCGACGCCCTCTCCAAAGCCCTCCTCCCGGACTCCCTCTCCTCCTTCCTCGACTCCATCTCCGCCCAATCGCCGCCCCTCTCCGGCGTCTCCGACACCCCCCCGCCTCCGCCGCCGCCCCCAAAACGCCCGAGGCCTTCCATTCCCGCCGCCGCCGGGAAGGCCTCCAACAAGAGGAAGTCCAGAGCCTCCAAGCGGAACCACACCACCTTCATCACCGCCGAACCGGCCAACTTCCGCCACATGGTCCAGCAGGTCACCGGCTTCCGATTCGGAAGCTCCCCGGTCCAGATCGTCCCCCCCGTTTTGAAACCCGAACCGCACCGCCCCGCCCCGCCCCGCCTCTCCGCCGGTCTCCCCACGCTCGACACCTCTGCCCTTTTGCTCCACCACCACACCTCCCGGAGCGGATCTGACATCTCCGGGCCGGGTCAGCTCGAGTTTTCCCCGGGTCTGCCCTACCCGGATCCCGCCCCGGAGTTTGATACCTTTTCGTCTTTTCCCACTCTTGAGTCGTGGAAGCCGGTTTTGTGA MASSENFLPSFSDPWALRPAFQDPWISDALSKALLPDSLSSFLDSISAQSPPLSGVSDTPPPPPPPPKRPRPSIPAAAGKASNKRKSRASKRNHTTFITAEPANFRHMVQQVTGFRFGSSPVQIVPPVLKPEPHRPAPPRLSAGLPTLDTSALLLHHHTSRSGSDISGPGQLEFSPGLPYPDPAPEFDTFSSFPTLESWKPVL Homology
BLAST of Sed0018866 vs. NCBI nr
Match: XP_038903325.1 (calmodulin-binding protein 25-like [Benincasa hispida]) HSP 1 Score: 194.1 bits (492), Expect = 1.2e-45 Identity = 135/238 (56.72%), Postives = 154/238 (64.71%), Query Frame = 0
BLAST of Sed0018866 vs. NCBI nr
Match: XP_022956380.1 (calmodulin-binding protein 25-like [Cucurbita moschata]) HSP 1 Score: 187.2 bits (474), Expect = 1.4e-43 Identity = 126/223 (56.50%), Postives = 143/223 (64.13%), Query Frame = 0
BLAST of Sed0018866 vs. NCBI nr
Match: XP_023539161.1 (calmodulin-binding protein 25-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 184.9 bits (468), Expect = 7.0e-43 Identity = 122/235 (51.91%), Postives = 143/235 (60.85%), Query Frame = 0
BLAST of Sed0018866 vs. NCBI nr
Match: XP_023539162.1 (calmodulin-binding protein 25-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023539163.1 calmodulin-binding protein 25-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 183.7 bits (465), Expect = 1.6e-42 Identity = 124/228 (54.39%), Postives = 141/228 (61.84%), Query Frame = 0
BLAST of Sed0018866 vs. NCBI nr
Match: XP_023527326.1 (calmodulin-binding protein 25-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 183.3 bits (464), Expect = 2.0e-42 Identity = 130/237 (54.85%), Postives = 145/237 (61.18%), Query Frame = 0
BLAST of Sed0018866 vs. ExPASy Swiss-Prot
Match: O80683 (Calmodulin-binding protein 25 OS=Arabidopsis thaliana OX=3702 GN=CAMBP25 PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.2e-16 Identity = 89/223 (39.91%), Postives = 113/223 (50.67%), Query Frame = 0
BLAST of Sed0018866 vs. ExPASy TrEMBL
Match: A0A6J1GXM6 (calmodulin-binding protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111458101 PE=4 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 6.8e-44 Identity = 126/223 (56.50%), Postives = 143/223 (64.13%), Query Frame = 0
BLAST of Sed0018866 vs. ExPASy TrEMBL
Match: A0A6J1J8X4 (calmodulin-binding protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111482350 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42 Identity = 132/240 (55.00%), Postives = 147/240 (61.25%), Query Frame = 0
BLAST of Sed0018866 vs. ExPASy TrEMBL
Match: A0A6J1F6P7 (calmodulin-binding protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111441371 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 4.9e-42 Identity = 131/239 (54.81%), Postives = 145/239 (60.67%), Query Frame = 0
BLAST of Sed0018866 vs. ExPASy TrEMBL
Match: A0A1S3B7H6 (calmodulin-binding protein 25 OS=Cucumis melo OX=3656 GN=LOC103486862 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 4.9e-42 Identity = 129/242 (53.31%), Postives = 154/242 (63.64%), Query Frame = 0
BLAST of Sed0018866 vs. ExPASy TrEMBL
Match: A0A0A0LER4 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816710 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 6.4e-42 Identity = 134/246 (54.47%), Postives = 154/246 (62.60%), Query Frame = 0
BLAST of Sed0018866 vs. TAIR 10
Match: AT3G56880.1 (VQ motif-containing protein ) HSP 1 Score: 103.6 bits (257), Expect = 1.9e-22 Identity = 100/245 (40.82%), Postives = 123/245 (50.20%), Query Frame = 0
BLAST of Sed0018866 vs. TAIR 10
Match: AT2G41010.1 (calmodulin (CAM)-binding protein of 25 kDa ) HSP 1 Score: 88.2 bits (217), Expect = 8.3e-18 Identity = 89/223 (39.91%), Postives = 113/223 (50.67%), Query Frame = 0
BLAST of Sed0018866 vs. TAIR 10
Match: AT1G35830.1 (VQ motif-containing protein ) HSP 1 Score: 52.4 bits (124), Expect = 5.0e-07 Identity = 66/218 (30.28%), Postives = 94/218 (43.12%), Query Frame = 0
BLAST of Sed0018866 vs. TAIR 10
Match: AT4G15120.1 (VQ motif-containing protein ) HSP 1 Score: 41.6 bits (96), Expect = 8.9e-04 Identity = 23/42 (54.76%), Postives = 27/42 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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