Sed0018853 (gene) Chayote v1

Overview


Name	Sed0018853
Type	gene
Organism	Sechium edule (Chayote v1)
Description	zinc finger protein 4-like
Location	LG07: 9612330 .. 9612899 (-)
RNA-Seq Expression	Sed0018853
Synteny	Sed0018853

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTTTCAAGGACAACAAATTGAAACCTTGACAGACAACAAAGGACAAGATGATTCAATTGAAGAAGAACAAGAAGCAACAGACCAACCTGATGGTGTTGAAGCTTTGGAGTGGCTGGACTTGAGCTTGGGAAACAACAACCAGCTTTTAACTGAATCACAAACATCTGCAGCTTCAACCAAGACTTTTTCATGCAACTTCTGTAAGAGAGTATTTTCCAGTTCACAAGCTTTGGGAGGCCATCAAAATGCCCACAAAAGGGAGAGAAGTGCAGCCAGAAGGAACCAAGCCCACAAAATGATGACTCTGCTCGGTCTGCCAATCCATAACTCCATGATTAGATCACTTGGTGTTCAACCACATTCACTTGTGCACAAACCAGCCAGGGAACTACCTACTGTAATGGCAGCAAGATTTAACCACGTTGAAACTGGTTCGTGGACGCCTTTCTTGATGGGGCACGCCATCAACTTGATGTGGCCAGGAAGCTTTCACTACACTCAACATCAAATTCTCCAAGAACCACCACCAGAACCACTCAAGCTCGACTTGAATCTTCGTCTTTGA

mRNA sequence

ATGATTTTTCAAGGACAACAAATTGAAACCTTGACAGACAACAAAGGACAAGATGATTCAATTGAAGAAGAACAAGAAGCAACAGACCAACCTGATGGTGTTGAAGCTTTGGAGTGGCTGGACTTGAGCTTGGGAAACAACAACCAGCTTTTAACTGAATCACAAACATCTGCAGCTTCAACCAAGACTTTTTCATGCAACTTCTGTAAGAGAGTATTTTCCAGTTCACAAGCTTTGGGAGGCCATCAAAATGCCCACAAAAGGGAGAGAAGTGCAGCCAGAAGGAACCAAGCCCACAAAATGATGACTCTGCTCGGTCTGCCAATCCATAACTCCATGATTAGATCACTTGGTGTTCAACCACATTCACTTGTGCACAAACCAGCCAGGGAACTACCTACTGTAATGGCAGCAAGATTTAACCACGTTGAAACTGGTTCGTGGACGCCTTTCTTGATGGGGCACGCCATCAACTTGATGTGGCCAGGAAGCTTTCACTACACTCAACATCAAATTCTCCAAGAACCACCACCAGAACCACTCAAGCTCGACTTGAATCTTCGTCTTTGA

Coding sequence (CDS)

ATGATTTTTCAAGGACAACAAATTGAAACCTTGACAGACAACAAAGGACAAGATGATTCAATTGAAGAAGAACAAGAAGCAACAGACCAACCTGATGGTGTTGAAGCTTTGGAGTGGCTGGACTTGAGCTTGGGAAACAACAACCAGCTTTTAACTGAATCACAAACATCTGCAGCTTCAACCAAGACTTTTTCATGCAACTTCTGTAAGAGAGTATTTTCCAGTTCACAAGCTTTGGGAGGCCATCAAAATGCCCACAAAAGGGAGAGAAGTGCAGCCAGAAGGAACCAAGCCCACAAAATGATGACTCTGCTCGGTCTGCCAATCCATAACTCCATGATTAGATCACTTGGTGTTCAACCACATTCACTTGTGCACAAACCAGCCAGGGAACTACCTACTGTAATGGCAGCAAGATTTAACCACGTTGAAACTGGTTCGTGGACGCCTTTCTTGATGGGGCACGCCATCAACTTGATGTGGCCAGGAAGCTTTCACTACACTCAACATCAAATTCTCCAAGAACCACCACCAGAACCACTCAAGCTCGACTTGAATCTTCGTCTTTGA

Protein sequence

MIFQGQQIETLTDNKGQDDSIEEEQEATDQPDGVEALEWLDLSLGNNNQLLTESQTSAASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKMMTLLGLPIHNSMIRSLGVQPHSLVHKPARELPTVMAARFNHVETGSWTPFLMGHAINLMWPGSFHYTQHQILQEPPPEPLKLDLNLRL

Homology

[Close]

BLAST of Sed0018853 vs. NCBI nr
Match: XP_038876126.1 (zinc finger protein 7-like [Benincasa hispida])

HSP 1 Score: 300.1 bits (767), Expect = 1.4e-77
Identity = 151/195 (77.44%), Postives = 168/195 (86.15%), Query Frame = 0


Query: 1   MIFQGQQIETLTDNKGQDDSIEEEQEATDQPDGVEALEWLDLSLGNNNQLLTESQTSAAS 60
           MIFQG+QIE+L +NKGQD+S EEE+EATDQPDGV ALEWL+LSLG N QLLTESQ SAAS
Sbjct: 1   MIFQGEQIESLKENKGQDESNEEEEEATDQPDGVGALEWLNLSLGRNKQLLTESQRSAAS 60

Query: 61  TKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKMMTLLGLPIHNSMIRSLGVQ 120
            KTFSCNFCKRVF SSQALGGHQNAHKRERSAARR+QAH+MMTLLGLPIHNSM+RSLGVQ
Sbjct: 61  AKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAHRMMTLLGLPIHNSMVRSLGVQ 120

Query: 121 PHSLVHKPARELPTVMAARFNHVETGSWTPFLMGHAINLMWPGSFHYTQHQILQEPPP-- 180
           PHSLVHKP RE  T + ARFNH++T SW PF++G A++ MWPGSF + QHQIL EPPP  
Sbjct: 121 PHSLVHKPGRE-DTAVVARFNHIKTSSWAPFMLGDAMDFMWPGSFRFAQHQILPEPPPPR 180

Query: 181 ----EPLKLDLNLRL 190
               EP KLDLNLRL
Sbjct: 181 EPPMEPFKLDLNLRL 194

[Close]

BLAST of Sed0018853 vs. NCBI nr
Match: XP_022942380.1 (zinc finger protein 4-like [Cucurbita moschata])

HSP 1 Score: 293.1 bits (749), Expect = 1.7e-75
Identity = 153/192 (79.69%), Postives = 170/192 (88.54%), Query Frame = 0


Query: 1   MIFQGQQIETLTDNKGQDDSIEEEQEATDQPDGVEALEWLDLSLG-NNNQLLTESQTS-A 60
           MIFQGQQIET  ++ GQ DS EEE+EATDQPDGV ALEWLDLSLG  N QLL ESQ+S A
Sbjct: 1   MIFQGQQIETSINSNGQADSSEEEREATDQPDGVAALEWLDLSLGRKNKQLLAESQSSAA 60

Query: 61  ASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKMMTLLGLPIHNSMIRSLG 120
           ASTKTFSCNFCKRVF SSQALGGHQNAHKRERSAARR+QAHKMMTL GLPIHNSMIRSLG
Sbjct: 61  ASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRSLG 120

Query: 121 VQPHSLVHKPARELPTVMAARFNHVETGSWTPFLMGHAINLMWPGSFHYTQHQILQEPPP 180
           VQPHSLVHKP RE  TV+AARFNHV+TGSW PF++G A++LMWPGSF +TQH++L++PP 
Sbjct: 121 VQPHSLVHKPGRE-DTVLAARFNHVKTGSWAPFMLGDAMDLMWPGSFRFTQHRVLEKPPS 180

Query: 181 -EPLKLDLNLRL 190
            EP +LDLNLRL
Sbjct: 181 IEPFQLDLNLRL 191

[Close]

BLAST of Sed0018853 vs. NCBI nr
Match: XP_023531890.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 286.6 bits (732), Expect = 1.6e-73
Identity = 154/194 (79.38%), Postives = 167/194 (86.08%), Query Frame = 0


Query: 1   MIFQGQQIETL--TDNKGQDDSIEEEQEATDQPDGVEALEWLDLSLG-NNNQLLTESQTS 60
           MIFQGQQIE    ++  GQ DS EEEQEATDQPDGV ALEWLDLSLG  N QLL ESQ+S
Sbjct: 1   MIFQGQQIEMSINSNGNGQADSSEEEQEATDQPDGVAALEWLDLSLGRKNKQLLAESQSS 60

Query: 61  -AASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKMMTLLGLPIHNSMIRS 120
            AASTKTFSCNFCKRVF SSQALGGHQNAHKRERSAARR+QAHKMMTL GLPIHNSMIRS
Sbjct: 61  AAASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRS 120

Query: 121 LGVQPHSLVHKPARELPTVMAARFNHVETGSWTPFLMGHAINLMWPGSFHYTQHQILQEP 180
           LGVQPHSLVHKP RE  TV+AARFNHV+TGSW PF++G A++LMWPGSF +TQH+IL +P
Sbjct: 121 LGVQPHSLVHKPGRE-DTVLAARFNHVKTGSWAPFMLGDAMDLMWPGSFRFTQHRILDKP 180

Query: 181 PP-EPLKLDLNLRL 190
            P EP  LDLNLRL
Sbjct: 181 SPIEPFHLDLNLRL 193

[Close]

BLAST of Sed0018853 vs. NCBI nr
Match: XP_022149328.1 (zinc finger protein 4-like [Momordica charantia])

HSP 1 Score: 285.4 bits (729), Expect = 3.5e-73
Identity = 154/195 (78.97%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MIFQGQQIETLTDNKGQDDSIEEEQEATDQPD-GVEALEWLDLSLGNNNQLLTESQTS-A 60
           MIFQG+QIE L DNKGQ DSIEEE  A DQPD GV  LEWL LSLG+N QLLTESQ S A
Sbjct: 1   MIFQGEQIEPLIDNKGQGDSIEEE-VARDQPDGGVGTLEWLSLSLGSNKQLLTESQRSAA 60

Query: 61  ASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKMMTLLGLPIHNSMIRSLG 120
           AS KTFSCNFCKRVF SSQALGGHQNAHKRERSAARR+QA +MMTLLGLPIHNSMIRSLG
Sbjct: 61  ASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSMIRSLG 120

Query: 121 VQPHSLVHKPARELPTVMAARFNHVETGSWTPFLMGHAINLMWPGSFHYTQHQILQEPPP 180
           VQPHSLVHKP RE  T + ARFNHV+TGSWTPF++G A++LMWPGSF +TQHQIL EPPP
Sbjct: 121 VQPHSLVHKPGRE-DTAIVARFNHVKTGSWTPFMLGDAMDLMWPGSFRFTQHQILPEPPP 180

Query: 181 ----EPLKLDLNLRL 190
               EP  LDLNLRL
Sbjct: 181 ETPSEPFMLDLNLRL 193

[Close]

BLAST of Sed0018853 vs. NCBI nr
Match: XP_023551737.1 (zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >KAG7014956.1 Zinc finger protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284.3 bits (726), Expect = 7.9e-73
Identity = 145/198 (73.23%), Postives = 168/198 (84.85%), Query Frame = 0


Query: 1   MIFQGQQIETLTDNKGQDDSI---EEEQEATDQPDGVEALEWLDLSLGNNNQLLTESQTS 60
           MIFQG+QIE+L + KG+D+S+   EEE+EATDQP+GV ALEWL+LSLG N QLLTESQ+S
Sbjct: 1   MIFQGEQIESLKEKKGEDESVEEEEEEEEATDQPEGVGALEWLNLSLGRNKQLLTESQSS 60

Query: 61  AASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKMMTLLGLPIHNSMIRSL 120
           A S KTFSCNFCKRVF SSQALGGHQNAHKRERSAARR+QA +MMTLLGLPIHNSM+RSL
Sbjct: 61  AGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSMVRSL 120

Query: 121 GVQPHSLVHKPARELPTVMAARFNHVETGSWTPFLMGHAINLMWPGSFHYTQHQILQEPP 180
           GVQPHSLVHK +RE  T + ARFNHV++GSW PF++G A++L WPGSF +TQHQ+L E P
Sbjct: 121 GVQPHSLVHKTSRE-DTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVLPESP 180

Query: 181 P------EPLKLDLNLRL 190
           P      EP KLDLNLRL
Sbjct: 181 PLREPQMEPFKLDLNLRL 197

[Close]

BLAST of Sed0018853 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 7.3e-13
Identity = 60/197 (30.46%), Postives = 90/197 (45.69%), Query Frame = 0


Query: 10  TLTDNKGQDDSIEEEQEATDQPDGVEALEWLDLSLGNNNQLLTESQTSAASTKTFSCNFC 69
           +L+ N   +++++ E  +   P        L  +  ++N    + Q  + S + FSCN+C
Sbjct: 39  SLSFNNNNNNNLDLESSSLTLP--------LSSTSESSNPEQQQQQQPSVSKRVFSCNYC 98

Query: 70  KRVFSSSQALGGHQNAHKRERSAARRNQ-------------------AHKMMTLLGLPIH 129
           +R F SSQALGGHQNAHKRER+ A+R                     A     L  LP+H
Sbjct: 99  QRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLH 158

Query: 130 NS------MIRSLGVQPHSLVH--KPARELPTVM---AARFNHVETGSWTPFLM-GHAIN 176
            S        R+LG++ HS  H     R+ P  +    ARFN    G+  PF +      
Sbjct: 159 GSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQGYFGNCIPFYVEDDEAE 218

[Close]

BLAST of Sed0018853 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.5e-13
Identity = 42/97 (43.30%), Postives = 56/97 (57.73%), Query Frame = 0


Query: 55  QTSAASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKM------------- 114
           Q   A  + FSCN+C+R F SSQALGGHQNAHKRER+ A+R Q +KM             
Sbjct: 59  QEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFG 118

Query: 115 -------MTLLGLPIHNSMIR--SLGVQPHSLVHKPA 130
                   ++  LP+H S+    +LG+Q HS +HKP+
Sbjct: 119 HGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPS 155

[Close]

BLAST of Sed0018853 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.5e-13
Identity = 52/140 (37.14%), Postives = 72/140 (51.43%), Query Frame = 0


Query: 40  LDLSLGNNNQLLTESQTSAASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAH 99
           LDL L +     T+S    A+ + FSCN+C+R F SSQALGGHQNAHKRER+ A+R    
Sbjct: 35  LDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHM 94

Query: 100 KMMTLLGLPIHNSMIRSLGVQPHSLVHKPARELPTVMAARFNHV-ETGSWTPFLMGH--- 159
             M       +     SLG+Q HS +       P  + +RF+H    G+  P    +   
Sbjct: 95  GRMFGHHHRPYTYTSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGYFGNTVPLFFDYDDG 154

Query: 160 AINLMWPGSFHYTQHQILQE 176
             +  WPGSF     Q+++E
Sbjct: 155 GSDFFWPGSF----RQVVEE 170

[Close]

BLAST of Sed0018853 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-11
Identity = 63/178 (35.39%), Postives = 88/178 (49.44%), Query Frame = 0


Query: 18  DDSIEEEQEATDQPDGVEALEWLDLSLGNNNQLLTESQTSAASTKTFSCNFCKRVFSSSQ 77
           + SIE+E+   D  +    L  +D  + +   ++ ES TS    K FSCN+C+R F SSQ
Sbjct: 19  NQSIEDEER--DVHNSSHELNLID-CIDDTTSIVNESTTS-TEQKLFSCNYCQRTFYSSQ 78

Query: 78  ALGGHQNAHKRERSAARRNQAHKMMT--------LLGLPIHN--SMIRSLGVQPHSLVHK 137
           ALGGHQNAHKRER+ A+R Q                 LP H   +  RSLG+Q HS+ HK
Sbjct: 79  ALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHK 138

Query: 138 PARELPTVMAARFN----HVETGSWT--PFLMGHAINLMWPG--SFHYTQHQILQEPP 178
                     + +N    H    +W+  PF    AI   +P   +FH+  HQ++   P
Sbjct: 139 ---------LSSYNGFGGHYGQINWSRLPFDQQPAIG-KFPSMDNFHHHHHQMMMMAP 182

[Close]

BLAST of Sed0018853 vs. ExPASy Swiss-Prot
Match: Q9FFX4 (Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.9e-09
Identity = 52/146 (35.62%), Postives = 75/146 (51.37%), Query Frame = 0


Query: 54  SQTSAASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKMMTLLGLPIHNSM 113
           S    AS + F C +C R F +SQALGGHQNAHKRER+AARRN      +   L  +N+ 
Sbjct: 28  SSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRNLGVLANSPPILDDNNTF 87

Query: 114 IRSL------GVQPHSLVHKPARELPTVMAARFNHVETGSWTPFLMGHAINLMWP----G 173
           +R          Q  +  ++P +E PT+M           + PF   H    ++P    G
Sbjct: 88  LRPYPCFYQNPFQGSTSGNEPLQEQPTMMT-------MDGYDPF---HPYPYVYPFALSG 147

Query: 174 SFHYTQHQILQEPPPEPLKLDLNLRL 190
           + +   + +++E   EPL LDL+LRL
Sbjct: 148 NNNDGGNGVMEE--DEPLDLDLSLRL 161

[Close]

BLAST of Sed0018853 vs. ExPASy TrEMBL
Match: A0A6J1FW71 (zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111447441 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 8.2e-76
Identity = 153/192 (79.69%), Postives = 170/192 (88.54%), Query Frame = 0


Query: 1   MIFQGQQIETLTDNKGQDDSIEEEQEATDQPDGVEALEWLDLSLG-NNNQLLTESQTS-A 60
           MIFQGQQIET  ++ GQ DS EEE+EATDQPDGV ALEWLDLSLG  N QLL ESQ+S A
Sbjct: 1   MIFQGQQIETSINSNGQADSSEEEREATDQPDGVAALEWLDLSLGRKNKQLLAESQSSAA 60

Query: 61  ASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKMMTLLGLPIHNSMIRSLG 120
           ASTKTFSCNFCKRVF SSQALGGHQNAHKRERSAARR+QAHKMMTL GLPIHNSMIRSLG
Sbjct: 61  ASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRSLG 120

Query: 121 VQPHSLVHKPARELPTVMAARFNHVETGSWTPFLMGHAINLMWPGSFHYTQHQILQEPPP 180
           VQPHSLVHKP RE  TV+AARFNHV+TGSW PF++G A++LMWPGSF +TQH++L++PP 
Sbjct: 121 VQPHSLVHKPGRE-DTVLAARFNHVKTGSWAPFMLGDAMDLMWPGSFRFTQHRVLEKPPS 180

Query: 181 -EPLKLDLNLRL 190
            EP +LDLNLRL
Sbjct: 181 IEPFQLDLNLRL 191

[Close]

BLAST of Sed0018853 vs. ExPASy TrEMBL
Match: A0A6J1D6I0 (zinc finger protein 4-like OS=Momordica charantia OX=3673 GN=LOC111017766 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.7e-73
Identity = 154/195 (78.97%), Postives = 165/195 (84.62%), Query Frame = 0


Query: 1   MIFQGQQIETLTDNKGQDDSIEEEQEATDQPD-GVEALEWLDLSLGNNNQLLTESQTS-A 60
           MIFQG+QIE L DNKGQ DSIEEE  A DQPD GV  LEWL LSLG+N QLLTESQ S A
Sbjct: 1   MIFQGEQIEPLIDNKGQGDSIEEE-VARDQPDGGVGTLEWLSLSLGSNKQLLTESQRSAA 60

Query: 61  ASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKMMTLLGLPIHNSMIRSLG 120
           AS KTFSCNFCKRVF SSQALGGHQNAHKRERSAARR+QA +MMTLLGLPIHNSMIRSLG
Sbjct: 61  ASAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSMIRSLG 120

Query: 121 VQPHSLVHKPARELPTVMAARFNHVETGSWTPFLMGHAINLMWPGSFHYTQHQILQEPPP 180
           VQPHSLVHKP RE  T + ARFNHV+TGSWTPF++G A++LMWPGSF +TQHQIL EPPP
Sbjct: 121 VQPHSLVHKPGRE-DTAIVARFNHVKTGSWTPFMLGDAMDLMWPGSFRFTQHQILPEPPP 180

Query: 181 ----EPLKLDLNLRL 190
               EP  LDLNLRL
Sbjct: 181 ETPSEPFMLDLNLRL 193

[Close]

BLAST of Sed0018853 vs. ExPASy TrEMBL
Match: A0A6J1J0M8 (zinc finger protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111481597 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 6.5e-73
Identity = 151/192 (78.65%), Postives = 167/192 (86.98%), Query Frame = 0


Query: 1   MIFQGQQIETLTDNKGQDDSIEEEQEATDQPDGVEALEWLDLSLG-NNNQLLTESQTS-A 60
           MIFQGQQIE    + G+ DS EEEQEATDQPDGV ALEWLDLSLG  N QLL ESQ+S A
Sbjct: 1   MIFQGQQIEKSIYSNGRADSSEEEQEATDQPDGVAALEWLDLSLGRKNKQLLAESQSSAA 60

Query: 61  ASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKMMTLLGLPIHNSMIRSLG 120
           ASTKTFSCNFCKRVF SSQALGGHQNAHKRERSAARR+QAHKMMTL GLPIHNSMIRSLG
Sbjct: 61  ASTKTFSCNFCKRVFFSSQALGGHQNAHKRERSAARRHQAHKMMTLFGLPIHNSMIRSLG 120

Query: 121 VQPHSLVHKPARELPTVMAARFNHVETGSWTPFLMGHAINLMWPGSFHYTQHQILQEPPP 180
           VQPHSLVHKP RE  TV+AARFN+V+TGSW PF++G A++LMWPGSF +TQH+ L++PPP
Sbjct: 121 VQPHSLVHKPGRE-DTVLAARFNNVKTGSWAPFMLGDAMDLMWPGSFRFTQHRNLEKPPP 180

Query: 181 -EPLKLDLNLRL 190
            E  +LDLNLRL
Sbjct: 181 IELFQLDLNLRL 191

[Close]

BLAST of Sed0018853 vs. ExPASy TrEMBL
Match: A0A6J1E569 (zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430693 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.2e-72
Identity = 144/202 (71.29%), Postives = 168/202 (83.17%), Query Frame = 0


Query: 1   MIFQGQQIETLTDNKGQDDSI-------EEEQEATDQPDGVEALEWLDLSLGNNNQLLTE 60
           MIFQG+QIE+L + KG+++S+       EEE+EATDQP+GV ALEWL+LSLG N QLLTE
Sbjct: 1   MIFQGEQIESLKEKKGENESVEEEEEEEEEEEEATDQPEGVGALEWLNLSLGRNKQLLTE 60

Query: 61  SQTSAASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKMMTLLGLPIHNSM 120
           SQ+SA S KTFSCNFCKRVF SSQALGGHQNAHKRERSAARR+QA +MMTLLGLPIHNSM
Sbjct: 61  SQSSAGSAKTFSCNFCKRVFYSSQALGGHQNAHKRERSAARRHQAQRMMTLLGLPIHNSM 120

Query: 121 IRSLGVQPHSLVHKPARELPTVMAARFNHVETGSWTPFLMGHAINLMWPGSFHYTQHQIL 180
           +RSLGVQPHSLVHK +RE  T + ARFNHV++GSW PF++G A++L WPGSF +TQHQ+L
Sbjct: 121 VRSLGVQPHSLVHKTSRE-DTAIVARFNHVKSGSWAPFMLGDAMDLRWPGSFRFTQHQVL 180

Query: 181 QEPPP------EPLKLDLNLRL 190
            E PP      EP KLDLNLRL
Sbjct: 181 PESPPLREPQMEPFKLDLNLRL 201

[Close]

BLAST of Sed0018853 vs. ExPASy TrEMBL
Match: A0A0A0L948 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G199020 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.6e-71
Identity = 147/206 (71.36%), Postives = 164/206 (79.61%), Query Frame = 0


Query: 1   MIFQGQQIETLTDNKGQDDSIEEE----------QEATDQPDGVEALEWLDLSLGNNNQL 60
           MIFQG+QIE+  +NKGQD+S EEE          +EA DQPDGV ALEWL LSLG N Q 
Sbjct: 1   MIFQGEQIESFKENKGQDESNEEEEAELDEEAELEEARDQPDGVGALEWLSLSLGRNKQP 60

Query: 61  LTESQTSAASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKMMTLLGLPIH 120
           L +SQ SAASTKTFSCNFCKR+F SSQALGGHQNAHKRERSAARR+QAHKMMTLLGLPIH
Sbjct: 61  LNDSQRSAASTKTFSCNFCKRIFYSSQALGGHQNAHKRERSAARRHQAHKMMTLLGLPIH 120

Query: 121 NSMIRSLGVQPHSLVHKPARELPTVMAARFNHVETGSW-TPFLMGHAINLMWPGSFHYTQ 180
           NSM+RSLGVQPHSLVHKP RE  T + ARFNHV+ GSW  PF++G A++ MWPGSF + Q
Sbjct: 121 NSMVRSLGVQPHSLVHKPGRE-DTAVVARFNHVKNGSWAAPFMLGDAMDFMWPGSFRFAQ 180

Query: 181 HQILQEPPP------EPLKLDLNLRL 190
           HQIL EPPP      EP KLDL+LRL
Sbjct: 181 HQILPEPPPPREPPMEPFKLDLSLRL 205

[Close]

BLAST of Sed0018853 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 8.5e-17
Identity = 68/193 (35.23%), Postives = 93/193 (48.19%), Query Frame = 0


Query: 13  DNKGQDDSIEEEQEATDQPDGVEALEWLDLSLGN--------NNQL----------LTES 72
           +N   D    +E++  DQ +GVE ++ LDL L          N +L          +T S
Sbjct: 34  ENYNIDTVAAQEEDDHDQKEGVEGIK-LDLMLAGYDSSQPQLNQELNLLDCLETGVVTPS 93

Query: 73  QTSAAST--KTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKMMTLLG------ 132
              + ST  K FSCN+C+R F SSQALGGHQNAHKRER+ A+R Q        G      
Sbjct: 94  FNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPYGFA 153

Query: 133 -LPIHNSMI-RSLGVQPHSLVHKPARELPTVMAARFNHVETGSWTPFLMGHAINLMWPGS 178
            +P H     R+LG+Q HS+ HKP+     V    +  +   S  P +   AI  +    
Sbjct: 154 PVPFHGQYSNRTLGIQAHSMSHKPSSY--NVYGGEYGQI-NWSRIPLVQQPAIAKLTSTE 213

[Close]

BLAST of Sed0018853 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 )

HSP 1 Score: 75.5 bits (184), Expect = 5.2e-14
Identity = 60/197 (30.46%), Postives = 90/197 (45.69%), Query Frame = 0


Query: 10  TLTDNKGQDDSIEEEQEATDQPDGVEALEWLDLSLGNNNQLLTESQTSAASTKTFSCNFC 69
           +L+ N   +++++ E  +   P        L  +  ++N    + Q  + S + FSCN+C
Sbjct: 39  SLSFNNNNNNNLDLESSSLTLP--------LSSTSESSNPEQQQQQQPSVSKRVFSCNYC 98

Query: 70  KRVFSSSQALGGHQNAHKRERSAARRNQ-------------------AHKMMTLLGLPIH 129
           +R F SSQALGGHQNAHKRER+ A+R                     A     L  LP+H
Sbjct: 99  QRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAATAAALSCLPLH 158

Query: 130 NS------MIRSLGVQPHSLVH--KPARELPTVM---AARFNHVETGSWTPFLM-GHAIN 176
            S        R+LG++ HS  H     R+ P  +    ARFN    G+  PF +      
Sbjct: 159 GSGNGNMTSFRTLGIRAHSSAHDVSMTRQTPETLIRNIARFNQGYFGNCIPFYVEDDEAE 218

[Close]

BLAST of Sed0018853 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 )

HSP 1 Score: 75.1 bits (183), Expect = 6.8e-14
Identity = 52/140 (37.14%), Postives = 72/140 (51.43%), Query Frame = 0


Query: 40  LDLSLGNNNQLLTESQTSAASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAH 99
           LDL L +     T+S    A+ + FSCN+C+R F SSQALGGHQNAHKRER+ A+R    
Sbjct: 35  LDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHM 94

Query: 100 KMMTLLGLPIHNSMIRSLGVQPHSLVHKPARELPTVMAARFNHV-ETGSWTPFLMGH--- 159
             M       +     SLG+Q HS +       P  + +RF+H    G+  P    +   
Sbjct: 95  GRMFGHHHRPYTYTSSSLGMQAHSGLLHHTLSQPQPLVSRFHHQGYFGNTVPLFFDYDDG 154

Query: 160 AINLMWPGSFHYTQHQILQE 176
             +  WPGSF     Q+++E
Sbjct: 155 GSDFFWPGSF----RQVVEE 170

[Close]

BLAST of Sed0018853 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 )

HSP 1 Score: 75.1 bits (183), Expect = 6.8e-14
Identity = 42/97 (43.30%), Postives = 56/97 (57.73%), Query Frame = 0


Query: 55  QTSAASTKTFSCNFCKRVFSSSQALGGHQNAHKRERSAARRNQAHKM------------- 114
           Q   A  + FSCN+C+R F SSQALGGHQNAHKRER+ A+R Q +KM             
Sbjct: 59  QEQLADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFG 118

Query: 115 -------MTLLGLPIHNSMIR--SLGVQPHSLVHKPA 130
                   ++  LP+H S+    +LG+Q HS +HKP+
Sbjct: 119 HGSVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPS 155

[Close]

BLAST of Sed0018853 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 )

HSP 1 Score: 70.9 bits (172), Expect = 1.3e-12
Identity = 63/178 (35.39%), Postives = 88/178 (49.44%), Query Frame = 0


Query: 18  DDSIEEEQEATDQPDGVEALEWLDLSLGNNNQLLTESQTSAASTKTFSCNFCKRVFSSSQ 77
           + SIE+E+   D  +    L  +D  + +   ++ ES TS    K FSCN+C+R F SSQ
Sbjct: 19  NQSIEDEER--DVHNSSHELNLID-CIDDTTSIVNESTTS-TEQKLFSCNYCQRTFYSSQ 78

Query: 78  ALGGHQNAHKRERSAARRNQAHKMMT--------LLGLPIHN--SMIRSLGVQPHSLVHK 137
           ALGGHQNAHKRER+ A+R Q                 LP H   +  RSLG+Q HS+ HK
Sbjct: 79  ALGGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHK 138

Query: 138 PARELPTVMAARFN----HVETGSWT--PFLMGHAINLMWPG--SFHYTQHQILQEPP 178
                     + +N    H    +W+  PF    AI   +P   +FH+  HQ++   P
Sbjct: 139 ---------LSSYNGFGGHYGQINWSRLPFDQQPAIG-KFPSMDNFHHHHHQMMMMAP 182

The following BLAST results are available for this feature:

BLAST of Sed0018853 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876126.1	1.4e-77	77.44	zinc finger protein 7-like [Benincasa hispida]	[more]
XP_022942380.1	1.7e-75	79.69	zinc finger protein 4-like [Cucurbita moschata]	[more]
XP_023531890.1	1.6e-73	79.38	zinc finger protein 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022149328.1	3.5e-73	78.97	zinc finger protein 4-like [Momordica charantia]	[more]
XP_023551737.1	7.9e-73	73.23	zinc finger protein 4-like [Cucurbita pepo subsp. pepo] >KAG7014956.1 Zinc finge...	[more]

BLAST of Sed0018853 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39263	7.3e-13	30.46	Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2	[more]
Q42485	9.5e-13	43.30	Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1	[more]
Q39266	9.5e-13	37.14	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]
Q39262	1.8e-11	35.39	Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1	[more]
Q9FFX4	2.9e-09	35.62	Zinc finger protein KNUCKLES OS=Arabidopsis thaliana OX=3702 GN=KNU PE=1 SV=1	[more]

BLAST of Sed0018853 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FW71	8.2e-76	79.69	zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111447441 PE=4 SV...	[more]
A0A6J1D6I0	1.7e-73	78.97	zinc finger protein 4-like OS=Momordica charantia OX=3673 GN=LOC111017766 PE=4 S...	[more]
A0A6J1J0M8	6.5e-73	78.65	zinc finger protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111481597 PE=4 SV=1	[more]
A0A6J1E569	4.2e-72	71.29	zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430693 PE=4 SV...	[more]
A0A0A0L948	1.6e-71	71.36	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G199020 P...	[more]

BLAST of Sed0018853 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10970.1	8.5e-17	35.23	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G66140.1	5.2e-14	30.46	zinc finger protein 4	[more]
AT1G24625.1	6.8e-14	37.14	zinc finger protein 7	[more]
AT1G80730.1	6.8e-14	43.30	zinc-finger protein 1	[more]
AT5G25160.1	1.3e-12	35.39	zinc finger protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 43..105 e-value: 1.5E-8 score: 36.4
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 64..88 e-value: 6.7E-6 score: 26.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR47593	ZINC FINGER PROTEIN 4-LIKE	coord: 1..189
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 66..86
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 64..91 score: 11.613913
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 61..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018853.1	Sed0018853.1	mRNA