Homology
BLAST of Sed0018704 vs. NCBI nr
Match:
XP_022131827.1 (RNA pseudouridine synthase 3, mitochondrial isoform X3 [Momordica charantia])
HSP 1 Score: 886.7 bits (2290), Expect = 8.8e-254
Identity = 424/473 (89.64%), Postives = 451/473 (95.35%), Query Frame = 0
Query: 10 MRQSLRRYLLVAARYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKPRQLLSLPPFPG 69
M+QS+RR+LL+AARYYSRISPPPPAYAKP+IRVSNNIAQLGSPKEGPKPRQLLSLPPFPG
Sbjct: 1 MQQSIRRHLLLAARYYSRISPPPPAYAKPVIRVSNNIAQLGSPKEGPKPRQLLSLPPFPG 60
Query: 70 YSLPGKNHIGVSGESTHVTAIKWVKHYFDEIDDLVVHSHFREGLVRVECPQSSCSDGKGN 129
Y LP KNHIG+SG STHVTAI WVKHYFDEI D V+ SHFR+GL++VECPQS S+GKGN
Sbjct: 61 YPLPRKNHIGISGGSTHVTAINWVKHYFDEIHDSVIQSHFRKGLIQVECPQSGGSNGKGN 120
Query: 130 LKPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVKYKD 189
LKPMRKI NEIMETGAR+HIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVKYKD
Sbjct: 121 LKPMRKIKSNEIMETGARVHIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVKYKD 180
Query: 190 SAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLMGRTE 249
SAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYD+GPKLVHRLDRESSGILLMGRT+
Sbjct: 181 SAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLMGRTK 240
Query: 250 ESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKEREGLISAPLSKVLLDD 309
ESVAHLQWLFSNIRN KSSCKAW+EA +ATYQKYWALVIGCP+EREGLISAPLSKVLLDD
Sbjct: 241 ESVAHLQWLFSNIRNAKSSCKAWDEACNATYQKYWALVIGCPREREGLISAPLSKVLLDD 300
Query: 310 GKTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 369
GKTERVVLA++TS+E QEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP
Sbjct: 301 GKTERVVLASKTSLEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
Query: 370 IVGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQKGSVLSKVPLLHLHCREL 429
IVGDYKYGWFVHR+WKQMPRVDVE ISG+PYKLRRPEGL VQKGSVLSKVPLLHLHCREL
Sbjct: 361 IVGDYKYGWFVHRTWKQMPRVDVEQISGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 420
Query: 430 VLPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRISWNLMSSYLV 483
VLPNIAKF+ VL +KRSI QHP+S +SDLLRFVA+MPSHMRISWNLMSSYLV
Sbjct: 421 VLPNIAKFIDVLVNKRSISQHPVSSSNSDLLRFVARMPSHMRISWNLMSSYLV 473
BLAST of Sed0018704 vs. NCBI nr
Match:
XP_022997125.1 (RNA pseudouridine synthase 3, mitochondrial [Cucurbita maxima] >XP_022997126.1 RNA pseudouridine synthase 3, mitochondrial [Cucurbita maxima])
HSP 1 Score: 877.5 bits (2266), Expect = 5.4e-251
Identity = 416/473 (87.95%), Postives = 448/473 (94.71%), Query Frame = 0
Query: 10 MRQSLRRYLLVAARYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKPRQLLSLPPFPG 69
MRQS+RR+LL+AARYYSRISPPPPAYA+P+IRVSNN+AQLGSPKEG KPRQLLSLPPFPG
Sbjct: 1 MRQSIRRHLLLAARYYSRISPPPPAYARPVIRVSNNVAQLGSPKEGSKPRQLLSLPPFPG 60
Query: 70 YSLPGKNHIGVSGESTHVTAIKWVKHYFDEIDDLVVHSHFREGLVRVECPQSSCSDGKGN 129
Y LP KN IG SGESTHVTAI WVKHYFDEI D V+ SHFR+GLV+V+CPQS DG+GN
Sbjct: 61 YPLPRKNQIGFSGESTHVTAITWVKHYFDEIHDSVIQSHFRKGLVQVQCPQSGGLDGEGN 120
Query: 130 LKPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVKYKD 189
LKPMRKI NEIMETGAR+HIPVSVAEM++SRRFDTIPSGTL+PNADEIKYLQRLVKYKD
Sbjct: 121 LKPMRKIRSNEIMETGARVHIPVSVAEMRVSRRFDTIPSGTLHPNADEIKYLQRLVKYKD 180
Query: 190 SAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLMGRTE 249
SAI+VLNKPP+LPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGI+LMGRT+
Sbjct: 181 SAILVLNKPPRLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGIILMGRTK 240
Query: 250 ESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKEREGLISAPLSKVLLDD 309
ESVAHLQWLFSNIRN KSSCKAW+EA +ATYQKYWALVIGCP+EREGLISAPLSKVLLDD
Sbjct: 241 ESVAHLQWLFSNIRNAKSSCKAWDEACNATYQKYWALVIGCPREREGLISAPLSKVLLDD 300
Query: 310 GKTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 369
GKTERVVLAN+TS E QEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP
Sbjct: 301 GKTERVVLANKTSFEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
Query: 370 IVGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQKGSVLSKVPLLHLHCREL 429
IVGDYKYGWFVHR+WKQMPRVD+EPISG+PYKLRRP+GL VQKGSVLSKVPLLHLHCREL
Sbjct: 361 IVGDYKYGWFVHRTWKQMPRVDIEPISGKPYKLRRPKGLDVQKGSVLSKVPLLHLHCREL 420
Query: 430 VLPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRISWNLMSSYLV 483
VLPN+AKFL VLDDKRSI H +S ++SDLLRFVA+MPSHMRISWNLMSSYLV
Sbjct: 421 VLPNLAKFLNVLDDKRSISHHRVSNLNSDLLRFVARMPSHMRISWNLMSSYLV 473
BLAST of Sed0018704 vs. NCBI nr
Match:
XP_022961737.1 (RNA pseudouridine synthase 3, mitochondrial [Cucurbita moschata] >XP_022961738.1 RNA pseudouridine synthase 3, mitochondrial [Cucurbita moschata])
HSP 1 Score: 876.3 bits (2263), Expect = 1.2e-250
Identity = 415/473 (87.74%), Postives = 448/473 (94.71%), Query Frame = 0
Query: 10 MRQSLRRYLLVAARYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKPRQLLSLPPFPG 69
MRQS+RR+LL+A RYYSRISPPPPAYA+P+IRVSNN+AQLGSPKEG KPRQLLSLPPFPG
Sbjct: 1 MRQSIRRHLLLATRYYSRISPPPPAYARPVIRVSNNVAQLGSPKEGSKPRQLLSLPPFPG 60
Query: 70 YSLPGKNHIGVSGESTHVTAIKWVKHYFDEIDDLVVHSHFREGLVRVECPQSSCSDGKGN 129
Y LP KN IG SGESTHVTAI WVKHYFDEI+D V+ SHFR+GLV+V+CPQS DG+GN
Sbjct: 61 YPLPRKNQIGFSGESTHVTAITWVKHYFDEIEDSVIQSHFRKGLVQVQCPQSGGLDGEGN 120
Query: 130 LKPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVKYKD 189
LKPMRKI NEIMETGAR+HIPVSVAEM++SRRFDTIPSGTL+PNADEIKYLQRLVKYKD
Sbjct: 121 LKPMRKIRSNEIMETGARVHIPVSVAEMRVSRRFDTIPSGTLHPNADEIKYLQRLVKYKD 180
Query: 190 SAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLMGRTE 249
SAI+VLNKPP+LPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGI+LMGRT+
Sbjct: 181 SAILVLNKPPRLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGIILMGRTK 240
Query: 250 ESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKEREGLISAPLSKVLLDD 309
ESVAHLQWLFSNIRN KSSCKAW+EA +ATYQKYWALVIGCP+EREGLISAPLSKVLLDD
Sbjct: 241 ESVAHLQWLFSNIRNAKSSCKAWDEACNATYQKYWALVIGCPREREGLISAPLSKVLLDD 300
Query: 310 GKTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 369
GKTERVVLAN+TS+E QEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP
Sbjct: 301 GKTERVVLANKTSLEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
Query: 370 IVGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQKGSVLSKVPLLHLHCREL 429
IVGDYKYGWFVHR+WKQMPRVD+EPISG+PYKLRRP+GL VQKGSVLSKVPLLHLHCREL
Sbjct: 361 IVGDYKYGWFVHRTWKQMPRVDIEPISGKPYKLRRPKGLDVQKGSVLSKVPLLHLHCREL 420
Query: 430 VLPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRISWNLMSSYLV 483
VLPN+AKFL VLDDKRSI H +S +SDLLRFVA+MPSHMRISWNLMSSYLV
Sbjct: 421 VLPNLAKFLNVLDDKRSISHHRVSYFNSDLLRFVARMPSHMRISWNLMSSYLV 473
BLAST of Sed0018704 vs. NCBI nr
Match:
XP_038885249.1 (LOW QUALITY PROTEIN: RNA pseudouridine synthase 3, mitochondrial [Benincasa hispida])
HSP 1 Score: 872.1 bits (2252), Expect = 2.3e-249
Identity = 417/482 (86.51%), Postives = 450/482 (93.36%), Query Frame = 0
Query: 1 MFCSKDYGIMRQSLRRYLLVAARYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKPRQ 60
+FC K Y IM Q++ R+LL+A RYYSRISPPPP+YAKP+IRVSNNIAQLGSPKEGPKPRQ
Sbjct: 36 LFCLKGYRIMWQNI-RHLLLATRYYSRISPPPPSYAKPVIRVSNNIAQLGSPKEGPKPRQ 95
Query: 61 LLSLPPFPGYSLPGKNHIGVSGESTHVTAIKWVKHYFDEIDDLVVHSHFREGLVRVECPQ 120
LLSLPPFPG+ LPGKN IGVSGESTHVTAI+WVKHYFDEI+D V+ SHFR+GLV+VEC +
Sbjct: 96 LLSLPPFPGHPLPGKNQIGVSGESTHVTAIRWVKHYFDEIEDSVIQSHFRKGLVQVECHK 155
Query: 121 SSCSDGKGNLKPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLYPNADEIKY 180
D KGN KPMRKI +EI+ETGARIHIPVSVAE+K+SRRFDTIPSGTLYPNADEIKY
Sbjct: 156 XGGLDVKGNSKPMRKIRSSEIVETGARIHIPVSVAELKVSRRFDTIPSGTLYPNADEIKY 215
Query: 181 LQRLVKYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESS 240
LQRLVKYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESS
Sbjct: 216 LQRLVKYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESS 275
Query: 241 GILLMGRTEESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKEREGLISA 300
GILLMGRT+ESVAHLQWLFSNIRN +S+CKAW+EA +ATYQKYWALVIGCP+EREGLISA
Sbjct: 276 GILLMGRTKESVAHLQWLFSNIRNARSACKAWDEACNATYQKYWALVIGCPREREGLISA 335
Query: 301 PLSKVLLDDGKTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRI 360
PLSKVLLDDGKTERVVLAN+TS+E QEAITEYRVLGPTINGCSWIELCP TSRKHQLRI
Sbjct: 336 PLSKVLLDDGKTERVVLANKTSLEASQEAITEYRVLGPTINGCSWIELCPHTSRKHQLRI 395
Query: 361 HCAEALGTPIVGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQKGSVLSKVP 420
HCAEALGTPIVGDYKYGWFVHR+WKQMPRVDVEPISG+PYKLRRP GL VQKGSVLSKVP
Sbjct: 396 HCAEALGTPIVGDYKYGWFVHRTWKQMPRVDVEPISGKPYKLRRPAGLDVQKGSVLSKVP 455
Query: 421 LLHLHCRELVLPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRISWNLMSSY 480
LLHLHCRELVLPN AKF+ VLDDKR I HP+S ++SDLLRFVA+MPSHMRISWNLMSSY
Sbjct: 456 LLHLHCRELVLPNFAKFVHVLDDKRPISHHPVSSLNSDLLRFVARMPSHMRISWNLMSSY 515
Query: 481 LV 483
LV
Sbjct: 516 LV 516
BLAST of Sed0018704 vs. NCBI nr
Match:
XP_023545207.1 (RNA pseudouridine synthase 3, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023545209.1 RNA pseudouridine synthase 3, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 869.4 bits (2245), Expect = 1.5e-248
Identity = 412/473 (87.10%), Postives = 445/473 (94.08%), Query Frame = 0
Query: 10 MRQSLRRYLLVAARYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKPRQLLSLPPFPG 69
M QS+RR+LL+A RYYSRISPPPPAYA+P+IRVSNN+AQLGS KEG KPRQLLSLPPFPG
Sbjct: 1 MWQSIRRHLLLATRYYSRISPPPPAYARPVIRVSNNVAQLGSRKEGSKPRQLLSLPPFPG 60
Query: 70 YSLPGKNHIGVSGESTHVTAIKWVKHYFDEIDDLVVHSHFREGLVRVECPQSSCSDGKGN 129
Y LP KN IG SGESTHVTAI WVKHYFDEI D V+ SHFR+GLV+V+CPQS DG+GN
Sbjct: 61 YPLPRKNQIGFSGESTHVTAITWVKHYFDEIHDSVIQSHFRKGLVQVQCPQSGGLDGEGN 120
Query: 130 LKPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVKYKD 189
LKPMRKI NEIMETGAR+HIPVSVAEM++SRRFDTIPSGTL+PNADEIKYLQRLVKYKD
Sbjct: 121 LKPMRKIRSNEIMETGARVHIPVSVAEMRVSRRFDTIPSGTLHPNADEIKYLQRLVKYKD 180
Query: 190 SAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLMGRTE 249
SAI+VLNKPP+LPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGI+LMGRT+
Sbjct: 181 SAILVLNKPPRLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGIILMGRTK 240
Query: 250 ESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKEREGLISAPLSKVLLDD 309
ESVAHLQWLFSNIRN KSSCKAW EA +ATYQKYWALVIGCP+EREGLISAPLSKVLLDD
Sbjct: 241 ESVAHLQWLFSNIRNAKSSCKAWGEACNATYQKYWALVIGCPREREGLISAPLSKVLLDD 300
Query: 310 GKTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 369
GKTERVVLAN+TS+E +QEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP
Sbjct: 301 GKTERVVLANKTSLEAFQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
Query: 370 IVGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQKGSVLSKVPLLHLHCREL 429
IVGDYKYGWFVHR+WKQMPRVD+EPISG+PYKLRRP+GL VQKGSVLSKVPLLHLHCREL
Sbjct: 361 IVGDYKYGWFVHRTWKQMPRVDIEPISGKPYKLRRPKGLDVQKGSVLSKVPLLHLHCREL 420
Query: 430 VLPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRISWNLMSSYLV 483
VLPN+AKFL VLDD RSI H +S ++SDLLRFVA+MPSHMRISWNLMSSYLV
Sbjct: 421 VLPNLAKFLNVLDDTRSISHHRVSNLNSDLLRFVARMPSHMRISWNLMSSYLV 473
BLAST of Sed0018704 vs. ExPASy Swiss-Prot
Match:
Q5XET6 (RNA pseudouridine synthase 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g78910 PE=2 SV=1)
HSP 1 Score: 666.0 bits (1717), Expect = 3.2e-190
Identity = 321/472 (68.01%), Postives = 387/472 (81.99%), Query Frame = 0
Query: 17 YLLVAARYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKPRQLLSLPPFPGYSLPGKN 76
YL V R YSR++PPP + +IRV+NN+A LG PK+GP PRQL+SLPPFPG+ LPGKN
Sbjct: 12 YLTVLIRRYSRVAPPPSS----VIRVTNNVAHLGPPKQGPLPRQLISLPPFPGHPLPGKN 71
Query: 77 HIGVSGE----STHVTAIKWVKHYFDEIDDLVVHSHFREGLVRVEC--PQSSCSDGKGNL 136
G G+ HVTAI WVK+YF+EI D + +HF +GLV++E + + + +
Sbjct: 72 -AGADGDDGDSGGHVTAISWVKYYFEEIYDKAIQTHFTKGLVQMEFRGRRDASREKEDGA 131
Query: 137 KPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVKYKDS 196
PMRKI NE+M+ G +I +PVS+AEM+IS+R+DTIPSGTLYPNADEI YLQRLV++KDS
Sbjct: 132 IPMRKIKHNEVMQIGDKIWLPVSIAEMRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDS 191
Query: 197 AIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLMGRTEE 256
AIIVLNKPPKLPVKGN+P+HNSMDALAAAALS+ D+GP+LVHRLDRE+SG+L+MGRT+E
Sbjct: 192 AIIVLNKPPKLPVKGNVPIHNSMDALAAAALSFGNDEGPRLVHRLDRETSGLLVMGRTKE 251
Query: 257 SVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKEREGLISAPLSKVLLDDG 316
S+ +L +FS+ + SSCKAWN+A +A YQ+YWALVIG PKE+EGLISAPLSKVLLDDG
Sbjct: 252 SIDYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDG 311
Query: 317 KTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPI 376
KT+RVVLA + E Q+AITEY+VLGP INGCSW+EL P TSRKHQLR+HCAEALGTPI
Sbjct: 312 KTDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRPITSRKHQLRVHCAEALGTPI 371
Query: 377 VGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQKGSVLSKVPLLHLHCRELV 436
VGDYKYGWFVH+ WKQMP+VD+EP +G+PYKLRRPEGL VQKGSVLSKVPLLHLHCRE+V
Sbjct: 372 VGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMV 431
Query: 437 LPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRISWNLMSSYLV 483
LPNIAKFL V++ + + H DLLRFVA MPSHM+ISWNLMSSYLV
Sbjct: 432 LPNIAKFLHVMNQQETEPLHTGIIDKPDLLRFVASMPSHMKISWNLMSSYLV 478
BLAST of Sed0018704 vs. ExPASy Swiss-Prot
Match:
Q0J4D4 (RNA pseudouridine synthase 3, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0520100 PE=2 SV=1)
HSP 1 Score: 601.7 bits (1550), Expect = 7.5e-171
Identity = 295/476 (61.97%), Postives = 365/476 (76.68%), Query Frame = 0
Query: 15 RRYLLVAARYYSRISPPPPAYAKP-IIRV-SNNIAQLGSPKEGPKPRQLLSLPPFPGYS- 74
RR + A R+ SR++PP PA A P ++RV +N+A+LG PK GP+PRQLLSLPPFPG
Sbjct: 5 RRRVGAAVRWLSRLAPPAPAEADPVVVRVDGSNVARLGKPKPGPRPRQLLSLPPFPGGGD 64
Query: 75 ---LPGKNHIGVSGESTHVTAIKWVKHYFDEIDDLVVHSHFREGLVRVECP--QSSCSDG 134
LPG+ + VTA+ WVKHY ++ VV +HF + LV EC + S
Sbjct: 65 GDPLPGRK----AAAPRRVTAVSWVKHYLADVPQEVVQAHFNKRLVYSECSDHEVSVETI 124
Query: 135 KGNLKPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVK 194
K ++KI N++ME G RIH+PVSVAE +I +R++TIP+ TL+PN DEI+YL+RLV
Sbjct: 125 KSQKHHLKKIKHNDVMEPGMRIHLPVSVAEGEIKKRYETIPTATLHPNKDEIEYLRRLVI 184
Query: 195 YKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLMG 254
+KDSAI+VLNKPPK+P+KGNLPVHNSMD LAAAALSY ++GPKLVHRLDRESSG+LL G
Sbjct: 185 HKDSAILVLNKPPKVPMKGNLPVHNSMDVLAAAALSYGNEEGPKLVHRLDRESSGLLLFG 244
Query: 255 RTEESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKEREGLISAPLSKVL 314
RT+ES L WLF+++ K++ + WN A +A Q+YWALVIG PKEREG+ISAPLSKVL
Sbjct: 245 RTKESFTRLHWLFTSVNLAKTNSQVWNAACEAYMQRYWALVIGTPKEREGIISAPLSKVL 304
Query: 315 LDDGKTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEAL 374
LDDGK ERV+LA+ + ++ QEA+T YRV+GPTI+GCSWIEL P T RKHQLR+HCAEAL
Sbjct: 305 LDDGKAERVILAHPSGIDGAQEAVTAYRVMGPTIHGCSWIELRPLTGRKHQLRVHCAEAL 364
Query: 375 GTPIVGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQKGSVLSKVPLLHLHC 434
GTPIVGDYKYGWFVH+ WKQ P+ D EP +G PYKLRRPEGL +QKGSVLSKVPLLHLHC
Sbjct: 365 GTPIVGDYKYGWFVHQRWKQNPQPDFEPFTGEPYKLRRPEGLEIQKGSVLSKVPLLHLHC 424
Query: 435 RELVLPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRISWNLMSSYLV 483
RE+V+PNIAKFL + G P S+ +LLRF+A MP+HM+ISWN+MSSYLV
Sbjct: 425 REMVIPNIAKFLSSNGEWHENGA-PWSKEKPNLLRFIAPMPAHMKISWNIMSSYLV 475
BLAST of Sed0018704 vs. ExPASy Swiss-Prot
Match:
Q9LT72 (RNA pseudouridine synthase 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g19440 PE=2 SV=1)
HSP 1 Score: 276.2 bits (705), Expect = 7.2e-73
Identity = 161/427 (37.70%), Postives = 241/427 (56.44%), Query Frame = 0
Query: 62 LSLPPFPGY---------SLPGKNHIGVSGESTHVTAIKWVKHYFDEIDDLVVHSHFREG 121
L+LPPF L + + S +++ TA++W+ ++ +V FR
Sbjct: 56 LTLPPFSPTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQKLFRLR 115
Query: 122 LVRVECPQSSCSDGKGNLKPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLY 181
VR E S D + ++++ E + G RI++P+SV + + +
Sbjct: 116 QVRREMSMSVDGD-ELQRSQLKRVAAKESLNVGDRIYLPLSVD--NDTPQTPPAKKESFQ 175
Query: 182 PNADEIKYLQRLVKYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLV 241
+ +E K++ LV YKD AIIVLNKP L V+G + S+D LAA+ L +D + P+LV
Sbjct: 176 CSDEERKFVCSLVLYKDPAIIVLNKPHGLAVQGGSGIKTSIDELAASCLKFDKSESPRLV 235
Query: 242 HRLDRESSGILLMGRTEESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPK 301
HRLDR+ SG+L++ RT+ + L +F G S+ + +KY ALVIGCP
Sbjct: 236 HRLDRDCSGLLVLARTQTAATVLHSIFREKTTGASAYGVKKNVK-SLKRKYMALVIGCPP 295
Query: 302 EREGLISAPLSKVLLDDGKTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRT 361
+ G ISAPL KV++DDGK+ER+ + + + Q AITEYRV+ + +G +W+EL P T
Sbjct: 296 RQRGQISAPLRKVVVDDGKSERITVNDNGELVSTQHAITEYRVIESSPHGYTWLELRPLT 355
Query: 362 SRKHQLRIHCAEALGTPIVGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQK 421
RKHQLR+HCAE LGTPIVGDYKYGW H++ + + P + P GL +
Sbjct: 356 GRKHQLRVHCAEVLGTPIVGDYKYGWQAHKAREPFVSSENNPTK----QSSSPFGLDLDG 415
Query: 422 GSVLSKVPLLHLHCRELVLPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRI 480
G V SK P LHLH +++ LPNI++ +L+ + IS +DS L+F A +PSHM++
Sbjct: 416 GDVSSKQPHLHLHSKQIDLPNISQ---LLEKMQVSSDSDISDLDS--LKFDAPLPSHMQL 469
BLAST of Sed0018704 vs. ExPASy Swiss-Prot
Match:
Q69K07 (RNA pseudouridine synthase 4, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0103500 PE=2 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 1.1e-44
Identity = 107/304 (35.20%), Postives = 166/304 (54.61%), Query Frame = 0
Query: 62 LSLPPFPGYSLPGKNHI-----GVSGESTH-VTAIKWVKHYFDEIDDLVVHSHFREGLVR 121
L LPPF G G+ TAIKWV+ ++ +V FR V+
Sbjct: 53 LQLPPFAPLDAAAAARAISRGGGEGGDGEQGATAIKWVRRCCPDLPTSLVQKLFRLRKVK 112
Query: 122 --VECPQSSCSDGKGNLKPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLYP 181
V + S +D +R++ + + G + +PV++ E ++ + +
Sbjct: 113 KNVVTAEISSADASAEQHRLRRVSAKDQLMPGDILFLPVNLKESSVAEKTKK------FD 172
Query: 182 NADEIKYLQRLVKYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVH 241
N +EI +L+ L YKD AIIV+NKPP +PV+G + + NS+D L A+ + + P+LVH
Sbjct: 173 NRNEINFLRGLEIYKDEAIIVVNKPPGMPVQGGVGIKNSIDVL-ASMFEENSSEAPRLVH 232
Query: 242 RLDRESSGILLMGRTEESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKE 301
RLDR+ SGIL++GR + S + L +F K++ + +KY ALVIG P+
Sbjct: 233 RLDRDCSGILVLGRNQLSTSMLHAIFRE----KTADALADGTQHVLQRKYVALVIGTPRH 292
Query: 302 REGLISAPLSKVLLDDGKTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRTS 358
+GL+SAPL+K+LL DGK+ER+ + ++ Q+A+TEYRV+ G +W+EL PRT
Sbjct: 293 PKGLLSAPLAKILLQDGKSERLTIRASSNAASVQDALTEYRVIESCPQGYTWLELFPRTG 345
BLAST of Sed0018704 vs. ExPASy Swiss-Prot
Match:
Q28C59 (Mitochondrial RNA pseudouridine synthase rpusd4 OS=Xenopus tropicalis OX=8364 GN=rpusd4 PE=2 SV=1)
HSP 1 Score: 123.2 bits (308), Expect = 7.8e-27
Identity = 93/292 (31.85%), Postives = 137/292 (46.92%), Query Frame = 0
Query: 174 NADEIKYLQRL---VKYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYD---D 233
NA I YL+ L V +D ++++NKP LPV G V S+ +L A + + +
Sbjct: 37 NAPTIVYLRELKSQVVREDPELVLVNKPHGLPVHGGPTVERSVASLLPALAKHHFGWKAE 96
Query: 234 GPKLVHRLDRESSGILLMGRTEESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALV 293
KL HRLDR+++G L++ RT E+ +Q +A E ++ YWAL
Sbjct: 97 PLKLCHRLDRDTTGALILARTTEAAERVQ-------------QALRERE--VHRVYWALC 156
Query: 294 IGCPKEREGLISAPLSKV------------------LLDDGKTERVVLANRTSMEPYQEA 353
+G P REG++ P+ + + ++G ERV + EA
Sbjct: 157 LGTPSPREGILDIPIMEKETSGPQKHYKMALSPRFRVSEEGAVERVRVPRSA-----HEA 216
Query: 354 ITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPIVGDYKYGWFVHRSWKQMPR 413
+T YR LG +G S +EL P T KHQLR+H A L PI+GD+KY + R Q P
Sbjct: 217 VTRYRTLG-AASGASLVELHPITGVKHQLRVHLALGLNCPILGDHKYSHW-GRLAPQKP- 276
Query: 414 VDVEPISGRPYKLRRPEGLSVQKGSVLSKVPLLHLHCRELVLPNIAKFLPVL 442
P + R GL+V + LS LHLH +L LP+ P++
Sbjct: 277 ---------PDSVLRALGLTVPQARTLS----LHLHAVQLTLPSSDGSTPIV 292
BLAST of Sed0018704 vs. ExPASy TrEMBL
Match:
A0A6J1BS40 (RNA pseudouridine synthase 3, mitochondrial isoform X3 OS=Momordica charantia OX=3673 GN=LOC111004890 PE=4 SV=1)
HSP 1 Score: 886.7 bits (2290), Expect = 4.3e-254
Identity = 424/473 (89.64%), Postives = 451/473 (95.35%), Query Frame = 0
Query: 10 MRQSLRRYLLVAARYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKPRQLLSLPPFPG 69
M+QS+RR+LL+AARYYSRISPPPPAYAKP+IRVSNNIAQLGSPKEGPKPRQLLSLPPFPG
Sbjct: 1 MQQSIRRHLLLAARYYSRISPPPPAYAKPVIRVSNNIAQLGSPKEGPKPRQLLSLPPFPG 60
Query: 70 YSLPGKNHIGVSGESTHVTAIKWVKHYFDEIDDLVVHSHFREGLVRVECPQSSCSDGKGN 129
Y LP KNHIG+SG STHVTAI WVKHYFDEI D V+ SHFR+GL++VECPQS S+GKGN
Sbjct: 61 YPLPRKNHIGISGGSTHVTAINWVKHYFDEIHDSVIQSHFRKGLIQVECPQSGGSNGKGN 120
Query: 130 LKPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVKYKD 189
LKPMRKI NEIMETGAR+HIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVKYKD
Sbjct: 121 LKPMRKIKSNEIMETGARVHIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVKYKD 180
Query: 190 SAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLMGRTE 249
SAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYD+GPKLVHRLDRESSGILLMGRT+
Sbjct: 181 SAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLMGRTK 240
Query: 250 ESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKEREGLISAPLSKVLLDD 309
ESVAHLQWLFSNIRN KSSCKAW+EA +ATYQKYWALVIGCP+EREGLISAPLSKVLLDD
Sbjct: 241 ESVAHLQWLFSNIRNAKSSCKAWDEACNATYQKYWALVIGCPREREGLISAPLSKVLLDD 300
Query: 310 GKTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 369
GKTERVVLA++TS+E QEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP
Sbjct: 301 GKTERVVLASKTSLEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
Query: 370 IVGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQKGSVLSKVPLLHLHCREL 429
IVGDYKYGWFVHR+WKQMPRVDVE ISG+PYKLRRPEGL VQKGSVLSKVPLLHLHCREL
Sbjct: 361 IVGDYKYGWFVHRTWKQMPRVDVEQISGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 420
Query: 430 VLPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRISWNLMSSYLV 483
VLPNIAKF+ VL +KRSI QHP+S +SDLLRFVA+MPSHMRISWNLMSSYLV
Sbjct: 421 VLPNIAKFIDVLVNKRSISQHPVSSSNSDLLRFVARMPSHMRISWNLMSSYLV 473
BLAST of Sed0018704 vs. ExPASy TrEMBL
Match:
A0A6J1K8P8 (RNA pseudouridine synthase 3, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492130 PE=4 SV=1)
HSP 1 Score: 877.5 bits (2266), Expect = 2.6e-251
Identity = 416/473 (87.95%), Postives = 448/473 (94.71%), Query Frame = 0
Query: 10 MRQSLRRYLLVAARYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKPRQLLSLPPFPG 69
MRQS+RR+LL+AARYYSRISPPPPAYA+P+IRVSNN+AQLGSPKEG KPRQLLSLPPFPG
Sbjct: 1 MRQSIRRHLLLAARYYSRISPPPPAYARPVIRVSNNVAQLGSPKEGSKPRQLLSLPPFPG 60
Query: 70 YSLPGKNHIGVSGESTHVTAIKWVKHYFDEIDDLVVHSHFREGLVRVECPQSSCSDGKGN 129
Y LP KN IG SGESTHVTAI WVKHYFDEI D V+ SHFR+GLV+V+CPQS DG+GN
Sbjct: 61 YPLPRKNQIGFSGESTHVTAITWVKHYFDEIHDSVIQSHFRKGLVQVQCPQSGGLDGEGN 120
Query: 130 LKPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVKYKD 189
LKPMRKI NEIMETGAR+HIPVSVAEM++SRRFDTIPSGTL+PNADEIKYLQRLVKYKD
Sbjct: 121 LKPMRKIRSNEIMETGARVHIPVSVAEMRVSRRFDTIPSGTLHPNADEIKYLQRLVKYKD 180
Query: 190 SAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLMGRTE 249
SAI+VLNKPP+LPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGI+LMGRT+
Sbjct: 181 SAILVLNKPPRLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGIILMGRTK 240
Query: 250 ESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKEREGLISAPLSKVLLDD 309
ESVAHLQWLFSNIRN KSSCKAW+EA +ATYQKYWALVIGCP+EREGLISAPLSKVLLDD
Sbjct: 241 ESVAHLQWLFSNIRNAKSSCKAWDEACNATYQKYWALVIGCPREREGLISAPLSKVLLDD 300
Query: 310 GKTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 369
GKTERVVLAN+TS E QEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP
Sbjct: 301 GKTERVVLANKTSFEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
Query: 370 IVGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQKGSVLSKVPLLHLHCREL 429
IVGDYKYGWFVHR+WKQMPRVD+EPISG+PYKLRRP+GL VQKGSVLSKVPLLHLHCREL
Sbjct: 361 IVGDYKYGWFVHRTWKQMPRVDIEPISGKPYKLRRPKGLDVQKGSVLSKVPLLHLHCREL 420
Query: 430 VLPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRISWNLMSSYLV 483
VLPN+AKFL VLDDKRSI H +S ++SDLLRFVA+MPSHMRISWNLMSSYLV
Sbjct: 421 VLPNLAKFLNVLDDKRSISHHRVSNLNSDLLRFVARMPSHMRISWNLMSSYLV 473
BLAST of Sed0018704 vs. ExPASy TrEMBL
Match:
A0A6J1HAX8 (RNA pseudouridine synthase 3, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111462419 PE=4 SV=1)
HSP 1 Score: 876.3 bits (2263), Expect = 5.8e-251
Identity = 415/473 (87.74%), Postives = 448/473 (94.71%), Query Frame = 0
Query: 10 MRQSLRRYLLVAARYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKPRQLLSLPPFPG 69
MRQS+RR+LL+A RYYSRISPPPPAYA+P+IRVSNN+AQLGSPKEG KPRQLLSLPPFPG
Sbjct: 1 MRQSIRRHLLLATRYYSRISPPPPAYARPVIRVSNNVAQLGSPKEGSKPRQLLSLPPFPG 60
Query: 70 YSLPGKNHIGVSGESTHVTAIKWVKHYFDEIDDLVVHSHFREGLVRVECPQSSCSDGKGN 129
Y LP KN IG SGESTHVTAI WVKHYFDEI+D V+ SHFR+GLV+V+CPQS DG+GN
Sbjct: 61 YPLPRKNQIGFSGESTHVTAITWVKHYFDEIEDSVIQSHFRKGLVQVQCPQSGGLDGEGN 120
Query: 130 LKPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVKYKD 189
LKPMRKI NEIMETGAR+HIPVSVAEM++SRRFDTIPSGTL+PNADEIKYLQRLVKYKD
Sbjct: 121 LKPMRKIRSNEIMETGARVHIPVSVAEMRVSRRFDTIPSGTLHPNADEIKYLQRLVKYKD 180
Query: 190 SAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLMGRTE 249
SAI+VLNKPP+LPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGI+LMGRT+
Sbjct: 181 SAILVLNKPPRLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGIILMGRTK 240
Query: 250 ESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKEREGLISAPLSKVLLDD 309
ESVAHLQWLFSNIRN KSSCKAW+EA +ATYQKYWALVIGCP+EREGLISAPLSKVLLDD
Sbjct: 241 ESVAHLQWLFSNIRNAKSSCKAWDEACNATYQKYWALVIGCPREREGLISAPLSKVLLDD 300
Query: 310 GKTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 369
GKTERVVLAN+TS+E QEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP
Sbjct: 301 GKTERVVLANKTSLEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
Query: 370 IVGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQKGSVLSKVPLLHLHCREL 429
IVGDYKYGWFVHR+WKQMPRVD+EPISG+PYKLRRP+GL VQKGSVLSKVPLLHLHCREL
Sbjct: 361 IVGDYKYGWFVHRTWKQMPRVDIEPISGKPYKLRRPKGLDVQKGSVLSKVPLLHLHCREL 420
Query: 430 VLPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRISWNLMSSYLV 483
VLPN+AKFL VLDDKRSI H +S +SDLLRFVA+MPSHMRISWNLMSSYLV
Sbjct: 421 VLPNLAKFLNVLDDKRSISHHRVSYFNSDLLRFVARMPSHMRISWNLMSSYLV 473
BLAST of Sed0018704 vs. ExPASy TrEMBL
Match:
A0A0A0LQ04 (PseudoU_synth_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G402020 PE=4 SV=1)
HSP 1 Score: 847.0 bits (2187), Expect = 3.8e-242
Identity = 411/476 (86.34%), Postives = 434/476 (91.18%), Query Frame = 0
Query: 7 YGIMRQSLRRYLLVAARYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKPRQLLSLPP 66
Y IM++S+RR+LL+A R YSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPK RQLLSLPP
Sbjct: 70 YKIMQRSMRRHLLLATRCYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPP 129
Query: 67 FPGYSLPGKNHIGVSGESTHVTAIKWVKHYFDEIDDLVVHSHFREGLVRVECPQSSCSDG 126
FPGY LPGKN +GVSGESTHVTAI+WVK+YFDEI D + SHFR+GLV+VECPQ D
Sbjct: 130 FPGYPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSHFRKGLVQVECPQLGGLDE 189
Query: 127 KGNLKPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVK 186
KGNLKPMRKI EIMETGARIH+PVSVAEMK++RRFDTIPSGTLYPNADEIKYLQRLVK
Sbjct: 190 KGNLKPMRKIRSGEIMETGARIHLPVSVAEMKVARRFDTIPSGTLYPNADEIKYLQRLVK 249
Query: 187 YKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLMG 246
YKDSAIIVLNKPPKLPVKG LPVHNSMDALA AALSYDYDDGPKLVHRLDRESSGILLMG
Sbjct: 250 YKDSAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMG 309
Query: 247 RTEESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKEREGLISAPLSKVL 306
RT+ESV HLQWLFSNIRN K +CKAW EA +ATYQKYWALVIGCP+EREG+ISAPLSKVL
Sbjct: 310 RTKESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSKVL 369
Query: 307 LDDGKTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEAL 366
LDDGKTERVVLAN+ S+E QEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEAL
Sbjct: 370 LDDGKTERVVLANKASIEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEAL 429
Query: 367 GTPIVGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQKGSVLSKVPLLHLHC 426
GTPIVGDYKYGWFVHR WKQMPRVDVEPISGRPYKLRRPEGL VQKGSVLSKVPLLHLHC
Sbjct: 430 GTPIVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHC 489
Query: 427 RELVLPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRISWNLMSSYLV 483
RELVLPNIAKFL V K P+S DSDLLRFVA+MPSHMRISWNLMSSYLV
Sbjct: 490 RELVLPNIAKFLNVFYGKGP--NRPVSSFDSDLLRFVARMPSHMRISWNLMSSYLV 543
BLAST of Sed0018704 vs. ExPASy TrEMBL
Match:
A0A1S3B3J4 (RNA pseudouridine synthase 3, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485411 PE=4 SV=1)
HSP 1 Score: 843.2 bits (2177), Expect = 5.4e-241
Identity = 409/473 (86.47%), Postives = 431/473 (91.12%), Query Frame = 0
Query: 10 MRQSLRRYLLVAARYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKPRQLLSLPPFPG 69
M++S+RR+LL+A RYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPK RQLLSLPPFPG
Sbjct: 1 MQRSIRRHLLLATRYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKARQLLSLPPFPG 60
Query: 70 YSLPGKNHIGVSGESTHVTAIKWVKHYFDEIDDLVVHSHFREGLVRVECPQSSCSDGKGN 129
+ LPGKN +GVSGESTHVTAI+WVK+YFDEI D + S FR+GLV+VECPQ D GN
Sbjct: 61 HPLPGKNQVGVSGESTHVTAIRWVKYYFDEIQDSQIQSLFRKGLVQVECPQLGGFDENGN 120
Query: 130 LKPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVKYKD 189
LKPMRKI EIME GARIH+PVSVAEMK+SRRFDTIPSGTLYPNADEIKYLQRLVKYKD
Sbjct: 121 LKPMRKIRSGEIMEIGARIHLPVSVAEMKVSRRFDTIPSGTLYPNADEIKYLQRLVKYKD 180
Query: 190 SAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLMGRTE 249
SAIIVLNKPPKLPVKG LPVHNSMDALAAAALSYDYD GPKLVHRLDRESSGILLMGRT+
Sbjct: 181 SAIIVLNKPPKLPVKGTLPVHNSMDALAAAALSYDYDYGPKLVHRLDRESSGILLMGRTK 240
Query: 250 ESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKEREGLISAPLSKVLLDD 309
ESV HLQWLFSNIRNGK +CKAW EA +ATYQKYWALVIG P+EREGLISAPLSKVLLDD
Sbjct: 241 ESVDHLQWLFSNIRNGKFTCKAWEEACNATYQKYWALVIGRPREREGLISAPLSKVLLDD 300
Query: 310 GKTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 369
GKTERVVLAN+ S+E QEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP
Sbjct: 301 GKTERVVLANKASLEASQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTP 360
Query: 370 IVGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQKGSVLSKVPLLHLHCREL 429
IVGDYKYGWFVHR WKQMPRVDVEPISGRPYKLRRPEGL VQKGSVLSKVPLLHLHCREL
Sbjct: 361 IVGDYKYGWFVHRRWKQMPRVDVEPISGRPYKLRRPEGLDVQKGSVLSKVPLLHLHCREL 420
Query: 430 VLPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRISWNLMSSYLV 483
VLPNIAKFL V DK I P+S D DLLRFVA+MPSHMRISWNLMSSYLV
Sbjct: 421 VLPNIAKFLNVFYDKGPISHRPVSSFDFDLLRFVARMPSHMRISWNLMSSYLV 473
BLAST of Sed0018704 vs. TAIR 10
Match:
AT1G78910.1 (Pseudouridine synthase family protein )
HSP 1 Score: 666.0 bits (1717), Expect = 2.3e-191
Identity = 321/472 (68.01%), Postives = 387/472 (81.99%), Query Frame = 0
Query: 17 YLLVAARYYSRISPPPPAYAKPIIRVSNNIAQLGSPKEGPKPRQLLSLPPFPGYSLPGKN 76
YL V R YSR++PPP + +IRV+NN+A LG PK+GP PRQL+SLPPFPG+ LPGKN
Sbjct: 12 YLTVLIRRYSRVAPPPSS----VIRVTNNVAHLGPPKQGPLPRQLISLPPFPGHPLPGKN 71
Query: 77 HIGVSGE----STHVTAIKWVKHYFDEIDDLVVHSHFREGLVRVEC--PQSSCSDGKGNL 136
G G+ HVTAI WVK+YF+EI D + +HF +GLV++E + + + +
Sbjct: 72 -AGADGDDGDSGGHVTAISWVKYYFEEIYDKAIQTHFTKGLVQMEFRGRRDASREKEDGA 131
Query: 137 KPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLYPNADEIKYLQRLVKYKDS 196
PMRKI NE+M+ G +I +PVS+AEM+IS+R+DTIPSGTLYPNADEI YLQRLV++KDS
Sbjct: 132 IPMRKIKHNEVMQIGDKIWLPVSIAEMRISKRYDTIPSGTLYPNADEIAYLQRLVRFKDS 191
Query: 197 AIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLMGRTEE 256
AIIVLNKPPKLPVKGN+P+HNSMDALAAAALS+ D+GP+LVHRLDRE+SG+L+MGRT+E
Sbjct: 192 AIIVLNKPPKLPVKGNVPIHNSMDALAAAALSFGNDEGPRLVHRLDRETSGLLVMGRTKE 251
Query: 257 SVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKEREGLISAPLSKVLLDDG 316
S+ +L +FS+ + SSCKAWN+A +A YQ+YWALVIG PKE+EGLISAPLSKVLLDDG
Sbjct: 252 SIDYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSPKEKEGLISAPLSKVLLDDG 311
Query: 317 KTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRTSRKHQLRIHCAEALGTPI 376
KT+RVVLA + E Q+AITEY+VLGP INGCSW+EL P TSRKHQLR+HCAEALGTPI
Sbjct: 312 KTDRVVLAQGSGFEASQDAITEYKVLGPKINGCSWVELRPITSRKHQLRVHCAEALGTPI 371
Query: 377 VGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQKGSVLSKVPLLHLHCRELV 436
VGDYKYGWFVH+ WKQMP+VD+EP +G+PYKLRRPEGL VQKGSVLSKVPLLHLHCRE+V
Sbjct: 372 VGDYKYGWFVHKRWKQMPQVDIEPTTGKPYKLRRPEGLDVQKGSVLSKVPLLHLHCREMV 431
Query: 437 LPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRISWNLMSSYLV 483
LPNIAKFL V++ + + H DLLRFVA MPSHM+ISWNLMSSYLV
Sbjct: 432 LPNIAKFLHVMNQQETEPLHTGIIDKPDLLRFVASMPSHMKISWNLMSSYLV 478
BLAST of Sed0018704 vs. TAIR 10
Match:
AT3G19440.1 (Pseudouridine synthase family protein )
HSP 1 Score: 276.2 bits (705), Expect = 5.1e-74
Identity = 161/427 (37.70%), Postives = 241/427 (56.44%), Query Frame = 0
Query: 62 LSLPPFPGY---------SLPGKNHIGVSGESTHVTAIKWVKHYFDEIDDLVVHSHFREG 121
L+LPPF L + + S +++ TA++W+ ++ +V FR
Sbjct: 56 LTLPPFSPTIDGTAVGKDLLSDGDSVKSSTDNSKTTALRWILRCRPDLPRTLVQKLFRLR 115
Query: 122 LVRVECPQSSCSDGKGNLKPMRKIWGNEIMETGARIHIPVSVAEMKISRRFDTIPSGTLY 181
VR E S D + ++++ E + G RI++P+SV + + +
Sbjct: 116 QVRREMSMSVDGD-ELQRSQLKRVAAKESLNVGDRIYLPLSVD--NDTPQTPPAKKESFQ 175
Query: 182 PNADEIKYLQRLVKYKDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLV 241
+ +E K++ LV YKD AIIVLNKP L V+G + S+D LAA+ L +D + P+LV
Sbjct: 176 CSDEERKFVCSLVLYKDPAIIVLNKPHGLAVQGGSGIKTSIDELAASCLKFDKSESPRLV 235
Query: 242 HRLDRESSGILLMGRTEESVAHLQWLFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPK 301
HRLDR+ SG+L++ RT+ + L +F G S+ + +KY ALVIGCP
Sbjct: 236 HRLDRDCSGLLVLARTQTAATVLHSIFREKTTGASAYGVKKNVK-SLKRKYMALVIGCPP 295
Query: 302 EREGLISAPLSKVLLDDGKTERVVLANRTSMEPYQEAITEYRVLGPTINGCSWIELCPRT 361
+ G ISAPL KV++DDGK+ER+ + + + Q AITEYRV+ + +G +W+EL P T
Sbjct: 296 RQRGQISAPLRKVVVDDGKSERITVNDNGELVSTQHAITEYRVIESSPHGYTWLELRPLT 355
Query: 362 SRKHQLRIHCAEALGTPIVGDYKYGWFVHRSWKQMPRVDVEPISGRPYKLRRPEGLSVQK 421
RKHQLR+HCAE LGTPIVGDYKYGW H++ + + P + P GL +
Sbjct: 356 GRKHQLRVHCAEVLGTPIVGDYKYGWQAHKAREPFVSSENNPTK----QSSSPFGLDLDG 415
Query: 422 GSVLSKVPLLHLHCRELVLPNIAKFLPVLDDKRSIGQHPISRVDSDLLRFVAKMPSHMRI 480
G V SK P LHLH +++ LPNI++ +L+ + IS +DS L+F A +PSHM++
Sbjct: 416 GDVSSKQPHLHLHSKQIDLPNISQ---LLEKMQVSSDSDISDLDS--LKFDAPLPSHMQL 469
BLAST of Sed0018704 vs. TAIR 10
Match:
AT1G76050.2 (Pseudouridine synthase family protein )
HSP 1 Score: 61.2 bits (147), Expect = 2.6e-09
Identity = 56/241 (23.24%), Postives = 93/241 (38.59%), Query Frame = 0
Query: 171 LYPNADEIKYLQRLVKYKDSAIIVLNKPPKL---PVKGN--------------LP----- 230
L P E + + + Y+D ++V+NKP + P GN LP
Sbjct: 136 LQPLKAEAEDIPLDIVYEDKHVLVVNKPAHMVVHPAPGNPTGTLVNGILHHCSLPCVDYS 195
Query: 231 -----------VHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLMGRTEESVAHLQW 290
+ + + + SY P +VHRLD+ ++G+L++ + E S AHL
Sbjct: 196 NSEEDDDSDEETFSDDEEMTTSPSSYAASVRPGIVHRLDKGTTGLLVVAKDEHSHAHLAE 255
Query: 291 LFSNIRNGKSSCKAWNEASDATYQKYWALVIGCPKEREGLISAPLSKVLLDDGKTERVVL 350
F + Y +L G P +G I P+ + + +
Sbjct: 256 QFK---------------LHTIERVYVSLTTGVPSPPQGRIEIPIGRD--SSNRIRMAAI 315
Query: 351 ANRTSMEPYQEAITEYRVLGPTINGCS-WIELCPRTSRKHQLRIHCAEALGTPIVGDYKY 378
+ A + Y+V+ G S +E T R HQ+R H A+ +G P++GD Y
Sbjct: 316 PGGVRGGRARHAASRYKVIETFAGGGSALVEWRLETGRTHQIRAH-AKYMGVPLLGDEVY 358
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022131827.1 | 8.8e-254 | 89.64 | RNA pseudouridine synthase 3, mitochondrial isoform X3 [Momordica charantia] | [more] |
XP_022997125.1 | 5.4e-251 | 87.95 | RNA pseudouridine synthase 3, mitochondrial [Cucurbita maxima] >XP_022997126.1 R... | [more] |
XP_022961737.1 | 1.2e-250 | 87.74 | RNA pseudouridine synthase 3, mitochondrial [Cucurbita moschata] >XP_022961738.1... | [more] |
XP_038885249.1 | 2.3e-249 | 86.51 | LOW QUALITY PROTEIN: RNA pseudouridine synthase 3, mitochondrial [Benincasa hisp... | [more] |
XP_023545207.1 | 1.5e-248 | 87.10 | RNA pseudouridine synthase 3, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023... | [more] |
Match Name | E-value | Identity | Description | |
Q5XET6 | 3.2e-190 | 68.01 | RNA pseudouridine synthase 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=A... | [more] |
Q0J4D4 | 7.5e-171 | 61.97 | RNA pseudouridine synthase 3, mitochondrial OS=Oryza sativa subsp. japonica OX=3... | [more] |
Q9LT72 | 7.2e-73 | 37.70 | RNA pseudouridine synthase 4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=A... | [more] |
Q69K07 | 1.1e-44 | 35.20 | RNA pseudouridine synthase 4, mitochondrial OS=Oryza sativa subsp. japonica OX=3... | [more] |
Q28C59 | 7.8e-27 | 31.85 | Mitochondrial RNA pseudouridine synthase rpusd4 OS=Xenopus tropicalis OX=8364 GN... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BS40 | 4.3e-254 | 89.64 | RNA pseudouridine synthase 3, mitochondrial isoform X3 OS=Momordica charantia OX... | [more] |
A0A6J1K8P8 | 2.6e-251 | 87.95 | RNA pseudouridine synthase 3, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A6J1HAX8 | 5.8e-251 | 87.74 | RNA pseudouridine synthase 3, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
A0A0A0LQ04 | 3.8e-242 | 86.34 | PseudoU_synth_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G40... | [more] |
A0A1S3B3J4 | 5.4e-241 | 86.47 | RNA pseudouridine synthase 3, mitochondrial isoform X1 OS=Cucumis melo OX=3656 G... | [more] |