Sed0018655 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAATTGCTCCAGCATTTAAAATTAAAGATTACACAGTGTGCCTCTTCCTTTTTTGTCATTATTTAGATGTCTTACCAATTGTTTGAAAAAGAAATTAACTGAGACTAGGGATAGTTTATAATTCAACTTCAACCACTTGTGCTGAGACTTGTATGAACCAAGTTCAAAAAGTCTCTTGAATGATATGTATAATCTTGTCCAGAAACTCACAGACTTAAAATAAAAATGTGTTAAATGCTATGAACTAAATAGTTGAGCTTTTTCTGTTCCCATAAATAGTATGTTACAATTATTAGTAGCATATAGGCATCCCTCAAGTTTGTTGAAAAATTTCATACAATTTTCAGGCGGAGTGGGAGTTTTCTGAACAGTCAACATCGAAGTTATCAAGAGTGAGGTTAATTAAATGCTTTGCCCTTACCTCTTTGTCCTTATTGCATTTTCTTATTGCTGGTTAATTAAATACTAAATGCTGTCAATTGTTCATAGGTAGGTCAATGCCAAGAGGCATGTAATGAAGGAGAAAAACCGAAGGATCAAGGATCTGACCTACATGGTACTTTATCTTGAAAATAATTATTTCTGAACTTATTCCTCATTATTAATTGTTCAAGTTTTCTTTTACAAGATAAACTTAACTAATTTCATGTAAGTTTTATCTTTTAAGTTGTTTTAAGTTTTTAATTTTAAATTTTGTAAGTTATAGAAATTAAATAGCCTCCATATTTTGTATCTATTAAAAGGTAAACTTCCTTAAGAAGTTTGTATCACCAATTTCTCCATTTGTAATAAACACAGATTCATTTGTTTCACTCTCACATTTTCTCTTGATTTGACTTTTGCTTCGGCAATATTCATTTCATATTTCATTTTTTCCCAACAAATTCCAAATTCATTTTTAAATGTGTTTGGATTTTCTTTAAGGAACCATATTTTGAAATTCATTTGTACCTAGAATAATAACTTTGCCTGGATGCTATCACTAGGATAACATATAGACGGTCTTAAATTGCTTATATGAAGTTATCCTTTTGACCTTTCTAGTTGAGTAGATAGTACTTGTTCTTGTTCAATGATCTAGAATAGGAAAGCTTTCTATTTTTCCTAGTATTTTAAATAGAAGTTCTGCTAATATCATATTTTTTTGGATGATTGGTAGCAGATGCATTCTGGACGAAGCTAAAGTTGGCAGCTGAACAGAAGGTATGTGCTTTTATAGAAATATGTTGATCATTTGGAACCTAAATGAAATTTTTTTAAAAGTACGATGATCATTTGGTACCTAAATGGAGATTTTAAAAAGTATGAGCTTTTATTTCTTTTTTAATTAGTCGTGCCGAAAATCCTTCTCCGGCGCCGGTGATGATCATTTGTACTCTTATTGCTTTTGTTTCCATAGGTTTCCCTGGTATCATTTTATTATATCAATCCAATCAAAAATATATATTTTGCGTGGTATTGAATTCTAAACTATTTATCTTCTCCTTAGAGATGTCCACGGGGCGGAGCTGGGGAACAACTTTCCCGTCCTTGTCCTCGTCACCAAAATCGATTTCCGTTTCCGCGAAATTCACTGTGGGGATCGCGACAAGGATTCCCGTGGGGAATTTTTTTCCGTTCCTTTTTTTTTTCTTGTTTCATTTTTTATATATATATATTTTTTAGAAAATACCTATCAAGTTTCTTAATTATTAAGGAAAAATATTTCTTTGAATGCCTAATTTCATAAACATATCTTTTTAATCCAAAATTTAGAGTAAAATGAGGGAAAAAATATTTTTTAAAAAATAATAAAAAATTGTAAACGGGGATAGGGAATACATTTTCCGTCCTCGGCCCCGTTTAGCTAACCGTGATTTTTCTTTCTCCGTCTCCAGTCCCGTTCCCAGCTTAAATAAGGATTCCCCACAGGAAAAAATTGACCTCTCTATTTCCACTTTCTTTGAGGTGCTGAAACATTCACGTGCTTTCAGATTTTGTTAAATCCTTGAATGCAAATGAACTTCACTTTAAATTAAACTCCAATATTTGGATTTTCTCAACACAATTCATTATTATTTAGTTTGAATGTGTGAAGAACAATGTTTATATTTGTGTCTAACAGCTTGTTTTCTTATTCATTCCACACAGTGGGCAAAATTGAAGCAGAGAGATTCTGTAACTCATTTCAACAGTTACACAATAAACTTGTACGTCATTCTGAAGATGTCATGCAATGATCAGTCATGTTTGTTATTTCTCTAATGACATTAAAACGAAAATCATATAATCAATTTGACTGCAGGTTAATGAAGAACTGAGTTCGGATTGCTGCCCGGAGCTTTCTGGAGTCATTTAGTTCCACAGAATAG ATGTTAATTGCTCCAGCATTTAAAATTAAAGATTACACAGTGTGCCTCTTCCTTTTTTGTCATTATTTAGATGTCTTACCAATTGCGGAGTGGGAGTTTTCTGAACAGTCAACATCGAAGTTATCAAGAGTAGGTCAATGCCAAGAGGCATGTAATGAAGGAGAAAAACCGAAGGATCAAGGATCTGACCTACATGATGCATTCTGGACGAAGCTAAAGTTGGCAGCTGAACAGAAGGTATTGGGCAAAATTGAAGCAGAGAGATTCTGTAACTCATTTCAACAGTTACACAATAAACTTGTACTTCGGATTGCTGCCCGGAGCTTTCTGGAGTCATTTAGTTCCACAGAATAG ATGTTAATTGCTCCAGCATTTAAAATTAAAGATTACACAGTGTGCCTCTTCCTTTTTTGTCATTATTTAGATGTCTTACCAATTGCGGAGTGGGAGTTTTCTGAACAGTCAACATCGAAGTTATCAAGAGTAGGTCAATGCCAAGAGGCATGTAATGAAGGAGAAAAACCGAAGGATCAAGGATCTGACCTACATGATGCATTCTGGACGAAGCTAAAGTTGGCAGCTGAACAGAAGGTATTGGGCAAAATTGAAGCAGAGAGATTCTGTAACTCATTTCAACAGTTACACAATAAACTTGTACTTCGGATTGCTGCCCGGAGCTTTCTGGAGTCATTTAGTTCCACAGAATAG MLIAPAFKIKDYTVCLFLFCHYLDVLPIAEWEFSEQSTSKLSRVGQCQEACNEGEKPKDQGSDLHDAFWTKLKLAAEQKVLGKIEAERFCNSFQQLHNKLVLRIAARSFLESFSSTE Homology
BLAST of Sed0018655 vs. NCBI nr
Match: XP_023512799.1 (uncharacterized protein LOC111777433 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 114.8 bits (286), Expect = 5.1e-22 Identity = 71/98 (72.45%), Postives = 76/98 (77.55%), Query Frame = 0
BLAST of Sed0018655 vs. NCBI nr
Match: XP_038900414.1 (uncharacterized protein LOC120087643 [Benincasa hispida]) HSP 1 Score: 113.6 bits (283), Expect = 1.1e-21 Identity = 71/114 (62.28%), Postives = 80/114 (70.18%), Query Frame = 0
BLAST of Sed0018655 vs. NCBI nr
Match: XP_022944774.1 (uncharacterized protein LOC111449126 isoform X1 [Cucurbita moschata] >KAG7010307.1 hypothetical protein SDJN02_27100 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 113.2 bits (282), Expect = 1.5e-21 Identity = 70/98 (71.43%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of Sed0018655 vs. NCBI nr
Match: XP_023512800.1 (uncharacterized protein LOC111777433 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 112.5 bits (280), Expect = 2.5e-21 Identity = 70/96 (72.92%), Postives = 74/96 (77.08%), Query Frame = 0
BLAST of Sed0018655 vs. NCBI nr
Match: XP_008449631.1 (PREDICTED: uncharacterized protein LOC103491458 [Cucumis melo]) HSP 1 Score: 112.1 bits (279), Expect = 3.3e-21 Identity = 74/117 (63.25%), Postives = 81/117 (69.23%), Query Frame = 0
BLAST of Sed0018655 vs. ExPASy TrEMBL
Match: A0A6J1FZ15 (uncharacterized protein LOC111449126 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449126 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 7.2e-22 Identity = 70/98 (71.43%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of Sed0018655 vs. ExPASy TrEMBL
Match: A0A1S3BLU6 (uncharacterized protein LOC103491458 OS=Cucumis melo OX=3656 GN=LOC103491458 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.6e-21 Identity = 74/117 (63.25%), Postives = 81/117 (69.23%), Query Frame = 0
BLAST of Sed0018655 vs. ExPASy TrEMBL
Match: A0A6J1FZ17 (uncharacterized protein LOC111449126 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449126 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 3.6e-21 Identity = 69/96 (71.88%), Postives = 73/96 (76.04%), Query Frame = 0
BLAST of Sed0018655 vs. ExPASy TrEMBL
Match: A0A0A0KGZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429090 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 4.0e-20 Identity = 72/117 (61.54%), Postives = 79/117 (67.52%), Query Frame = 0
BLAST of Sed0018655 vs. ExPASy TrEMBL
Match: A0A6J1JEA9 (uncharacterized protein LOC111483657 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483657 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 5.2e-20 Identity = 67/98 (68.37%), Postives = 74/98 (75.51%), Query Frame = 0
BLAST of Sed0018655 vs. TAIR 10
Match: AT5G12240.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 10 growth stages. ) HSP 1 Score: 53.9 bits (128), Expect = 1.0e-07 Identity = 40/95 (42.11%), Postives = 52/95 (54.74%), Query Frame = 0
BLAST of Sed0018655 vs. TAIR 10
Match: AT5G12240.1 (unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 7.2e-06 Identity = 22/34 (64.71%), Postives = 27/34 (79.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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