Sed0018604 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGCATCTTGGGATTTAACTTTTTCAATATCAAAAAAGAAGAAAAAAAAAAGCACTCTTTTCTCTCAATTTAGAGTATTGAATAATGGAAGAGTCCAAAAATTGAACCAAAATAATGGGTTTTCCATTCTGATTCTGTAACTTTTACACACACAGACACCATATCTTCCATTCCACCACAACACTGTCTCTATTTCTCTCTCTCTCTCTCCATTTATTTATTTCTTGTGTCGAATCTTACCCACTCCATAACCAGTAAAGCCTATGGAACAAACCCACTTCCCTTCAACCTATACAGATTAATCCTTAAAGGGCTCTCCAGATTCTTCAATTAAACTCATGTATGTCACTTCTAGATGTGAATCACTAGCTGTTTTTTTCTTCTGCTTTTCCCTGATTTCTATGTTGGGTTATTCCTTTGTTCTTCTCTGTTTTCTTTTGGGTTTTTTTTTTTTTTGGAAATTTCTGCTTTCTAGGTTATGATTAGTTACTTTTTTGGCTTCTTTTCTTGGAAATGTTTCTGGGTTTCTTTTTTCTCTGCATTATTTGGACTACTGCTGTTTATGATGGTGTGTTCTGCTTCCTTGATGGTTGTTGTTGTTGTTGTTTTGTGATTGCTTAAGCTTTTGGTATGTCTTGTTTTGTGAAATTTGGGGTTGATCATTTGTATTTAACTCTTAGAGAAATGGGTTGTTTGAGTTTGATTTAAGTGAGTTTAATGGTTGGAAGAAGTTGGTTTGTAGTTTAAAAATGAAGTTTCCATGATTCTAGGTTTATGGCTTTTAGTAGGTTGTAAGATTTGTAAATTTGTAGTTTGGGATAGAGAAATGTATGTGTTAATTCTAAGTTTGGCTTCATAATCTCAAGTTTTGAGAGAGTAATCTGTGAATCAAGGACAGTAGAGTTTTGGGTTTTCTAATTTTGTACCTATTTCTGGCTTTTTTCTTAAAAAAAACAAAAACATTGTTTTTCCTTAGTTCAAATTCAAAGGTATGATTATACAAAAAGACTTCTGAAGTATTAGTACTTGTCGCTTTTTCATGGATCCATAGCAAAAGACTGTCTGATAATCTTGTCTATGTTGCATATTTTGGCTCATTAGCTTTAACTTTTAGGTTTGGTGGTGACTTAATCTAGTATTAGAGCATGAGGGCATATACCAAACTTCTTCAGTATAATTTCTTTTTGTATAATTTCTTTTTGGTTGATATAATTAAATTTACTTCAATCCATCAGCTTAAAAGCTATTGGTGGTTTAACATAATTCAACACTTTGGTATCCAAGTTGACATGAGAGAGGAAAAGTTGAATGTATTAAATGATCAAATTTAAGAAAAATTCATGCTTCCTTACCATGTTCTTAATTCACTGAGTCCATGTTAATCTTAAAATTTTAATTTCATCTTGTATGATTCATTGGATCTACTGGTGATTAAACAAAAAAAAAAAAAAATATATCATTTAGGTATATAGACAATAAGAGTTTCTTGGTTCAAATATGGAAGATTTGAATGCCATTCGCCCTTCTTTGTACATTCTTTTCCATTATTATGCTATGAAGGTCCAGAGCCAGATAACTGGAAGCAACATTAACTTGTTTGATTGTTCTTAAATTCTAACAACAGAAGGAAAACAAGGGACTCTTTGTTTTGGAACCCTCTGGTTCTTAACTTTCTTCACAATTAATTCAAATATGGAAGCTTTAGATTTCAACCTTGAAGCTGCAAAATATTCAGAGCCCAGTAGCAGTCAAGAAGAAGCAAATCCTGATCACTCCAACACTGTCACTACTGCTTCTTCCTGCACTCCAAGCTCGAGTAAAGTCGCCATTGCTGATACGATGCCTATTTCACTTGACTTGACACTTCAGTTTAACTCAAGTGATATTGAGTCTAAGGGCGATGGTGAGTTTCATGGGGAAACAAATAGCAACAAATCCTCATCTGCAACAATACCGAGAGTGTTCTCCTGCAATTACTGTCGTCGCAAGTTCTTCAGCTCGCAGGCGCTTGGTGGGCATCAAAATGCACACAAAAGAGAGAGGACAATGGCTAAACGTGTAACCCGGATGGAAATGTTCTTCGACAGATACGGTAGCTTGGCATCTCTGCCACTTCATGGCTCGACCCTTAGATCCCTTGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCATCAGATCAGAGACTTTATCCTGGTAGGAGCATTGGAGCAAAGTTTGAGCAGACCTCTTTCGGGTTCCCGACATTCGTCGAGGAATACGATGATGATGTCGGGATGTTTTGGCCAGGAAGCTTCAGGCAGGTGGCTGCCAAAGATGATAGCAGCTTAGGTCCTATGAATGCCACAGTTCAAATTTCAAATTCAGAGTTTGGGATAACAATGCCTCCACCAACAACAGAAGCATCCTCACCTGATCTCACTTTGAGGCTTTAGTAAGTAATTTCTCTTTAATGCTTTCTTCTTAATGTATTAACTTTTGTAAAGTTGGATGATGTCTGCCATTATCTGCCATTTTGTAGTGGCTCTAAGCTTATAAATAATTCAGTAAATCTTCAAAATTCCTTTTTGCCCATTACCTTTAACATCCAAGTCTAAAATACACTTTTTGATCCTTTAGTTCCTTTTTCTCTCCAAAATTGTCCATTAAATTCAAATACTTCTATTCTTATCTCTTCATTATTTGGATGATTGAATTGATACTTCTGTCAAATCGATCGAAGTAATGTAAGGCGC TCGCATCTTGGGATTTAACTTTTTCAATATCAAAAAAGAAGAAAAAAAAAAGCACTCTTTTCTCTCAATTTAGAGTATTGAATAATGGAAGAGTCCAAAAATTGAACCAAAATAATGGGTTTTCCATTCTGATTCTGTAACTTTTACACACACAGACACCATATCTTCCATTCCACCACAACACTGTCTCTATTTCTCTCTCTCTCTCTCCATTTATTTATTTCTTGTGTCGAATCTTACCCACTCCATAACCAGTAAAGCCTATGGAACAAACCCACTTCCCTTCAACCTATACAGATTAATCCTTAAAGGGCTCTCCAGATTCTTCAATTAAACTCATAAGGAAAACAAGGGACTCTTTGTTTTGGAACCCTCTGGTTCTTAACTTTCTTCACAATTAATTCAAATATGGAAGCTTTAGATTTCAACCTTGAAGCTGCAAAATATTCAGAGCCCAGTAGCAGTCAAGAAGAAGCAAATCCTGATCACTCCAACACTGTCACTACTGCTTCTTCCTGCACTCCAAGCTCGAGTAAAGTCGCCATTGCTGATACGATGCCTATTTCACTTGACTTGACACTTCAGTTTAACTCAAGTGATATTGAGTCTAAGGGCGATGGTGAGTTTCATGGGGAAACAAATAGCAACAAATCCTCATCTGCAACAATACCGAGAGTGTTCTCCTGCAATTACTGTCGTCGCAAGTTCTTCAGCTCGCAGGCGCTTGGTGGGCATCAAAATGCACACAAAAGAGAGAGGACAATGGCTAAACGTGTAACCCGGATGGAAATGTTCTTCGACAGATACGGTAGCTTGGCATCTCTGCCACTTCATGGCTCGACCCTTAGATCCCTTGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCATCAGATCAGAGACTTTATCCTGGTAGGAGCATTGGAGCAAAGTTTGAGCAGACCTCTTTCGGGTTCCCGACATTCGTCGAGGAATACGATGATGATGTCGGGATGTTTTGGCCAGGAAGCTTCAGGCAGGTGGCTGCCAAAGATGATAGCAGCTTAGGTCCTATGAATGCCACAGTTCAAATTTCAAATTCAGAGTTTGGGATAACAATGCCTCCACCAACAACAGAAGCATCCTCACCTGATCTCACTTTGAGGCTTTAGTAAGTAATTTCTCTTTAATGCTTTCTTCTTAATGTATTAACTTTTGTAAAGTTGGATGATGTCTGCCATTATCTGCCATTTTGTAGTGGCTCTAAGCTTATAAATAATTCAGTAAATCTTCAAAATTCCTTTTTGCCCATTACCTTTAACATCCAAGTCTAAAATACACTTTTTGATCCTTTAGTTCCTTTTTCTCTCCAAAATTGTCCATTAAATTCAAATACTTCTATTCTTATCTCTTCATTATTTGGATGATTGAATTGATACTTCTGTCAAATCGATCGAAGTAATGTAAGGCGC ATGGAAGCTTTAGATTTCAACCTTGAAGCTGCAAAATATTCAGAGCCCAGTAGCAGTCAAGAAGAAGCAAATCCTGATCACTCCAACACTGTCACTACTGCTTCTTCCTGCACTCCAAGCTCGAGTAAAGTCGCCATTGCTGATACGATGCCTATTTCACTTGACTTGACACTTCAGTTTAACTCAAGTGATATTGAGTCTAAGGGCGATGGTGAGTTTCATGGGGAAACAAATAGCAACAAATCCTCATCTGCAACAATACCGAGAGTGTTCTCCTGCAATTACTGTCGTCGCAAGTTCTTCAGCTCGCAGGCGCTTGGTGGGCATCAAAATGCACACAAAAGAGAGAGGACAATGGCTAAACGTGTAACCCGGATGGAAATGTTCTTCGACAGATACGGTAGCTTGGCATCTCTGCCACTTCATGGCTCGACCCTTAGATCCCTTGGCATTGAAGCTCATGGTGCTCTACACCAAACAGTTCTAGCATCAGATCAGAGACTTTATCCTGGTAGGAGCATTGGAGCAAAGTTTGAGCAGACCTCTTTCGGGTTCCCGACATTCGTCGAGGAATACGATGATGATGTCGGGATGTTTTGGCCAGGAAGCTTCAGGCAGGTGGCTGCCAAAGATGATAGCAGCTTAGGTCCTATGAATGCCACAGTTCAAATTTCAAATTCAGAGTTTGGGATAACAATGCCTCCACCAACAACAGAAGCATCCTCACCTGATCTCACTTTGAGGCTTTAG MEALDFNLEAAKYSEPSSSQEEANPDHSNTVTTASSCTPSSSKVAIADTMPISLDLTLQFNSSDIESKGDGEFHGETNSNKSSSATIPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRVTRMEMFFDRYGSLASLPLHGSTLRSLGIEAHGALHQTVLASDQRLYPGRSIGAKFEQTSFGFPTFVEEYDDDVGMFWPGSFRQVAAKDDSSLGPMNATVQISNSEFGITMPPPTTEASSPDLTLRL Homology
BLAST of Sed0018604 vs. NCBI nr
Match: XP_004142819.2 (zinc finger protein 7 [Cucumis sativus] >XP_004142820.2 zinc finger protein 7 [Cucumis sativus] >XP_031741931.1 zinc finger protein 7 [Cucumis sativus] >KAE8648580.1 hypothetical protein Csa_008564 [Cucumis sativus]) HSP 1 Score: 413.7 bits (1062), Expect = 1.1e-111 Identity = 213/250 (85.20%), Postives = 226/250 (90.40%), Query Frame = 0
BLAST of Sed0018604 vs. NCBI nr
Match: XP_038875240.1 (zinc finger protein 4-like [Benincasa hispida] >XP_038875241.1 zinc finger protein 4-like [Benincasa hispida]) HSP 1 Score: 412.5 bits (1059), Expect = 2.5e-111 Identity = 214/251 (85.26%), Postives = 229/251 (91.24%), Query Frame = 0
BLAST of Sed0018604 vs. NCBI nr
Match: XP_008466973.1 (PREDICTED: zinc finger protein 7-like [Cucumis melo] >XP_008466976.1 PREDICTED: zinc finger protein 7-like [Cucumis melo]) HSP 1 Score: 409.5 bits (1051), Expect = 2.1e-110 Identity = 212/250 (84.80%), Postives = 226/250 (90.40%), Query Frame = 0
BLAST of Sed0018604 vs. NCBI nr
Match: KAA0046429.1 (zinc finger protein 7-like [Cucumis melo var. makuwa] >TYK29778.1 zinc finger protein 7-like [Cucumis melo var. makuwa]) HSP 1 Score: 408.7 bits (1049), Expect = 3.6e-110 Identity = 212/250 (84.80%), Postives = 225/250 (90.00%), Query Frame = 0
BLAST of Sed0018604 vs. NCBI nr
Match: XP_022991196.1 (zinc finger protein 7-like [Cucurbita maxima]) HSP 1 Score: 406.8 bits (1044), Expect = 1.4e-109 Identity = 213/252 (84.52%), Postives = 228/252 (90.48%), Query Frame = 0
BLAST of Sed0018604 vs. ExPASy Swiss-Prot
Match: Q39263 (Zinc finger protein 4 OS=Arabidopsis thaliana OX=3702 GN=ZFP4 PE=2 SV=2) HSP 1 Score: 120.9 bits (302), Expect = 2.0e-26 Identity = 97/251 (38.65%), Postives = 127/251 (50.60%), Query Frame = 0
BLAST of Sed0018604 vs. ExPASy Swiss-Prot
Match: Q39266 (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 3.5e-23 Identity = 84/224 (37.50%), Postives = 113/224 (50.45%), Query Frame = 0
BLAST of Sed0018604 vs. ExPASy Swiss-Prot
Match: Q42485 (Zinc finger protein 1 OS=Arabidopsis thaliana OX=3702 GN=ZFP1 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 5.3e-19 Identity = 61/146 (41.78%), Postives = 80/146 (54.79%), Query Frame = 0
BLAST of Sed0018604 vs. ExPASy Swiss-Prot
Match: Q39262 (Zinc finger protein 3 OS=Arabidopsis thaliana OX=3702 GN=ZFP3 PE=1 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.9e-17 Identity = 46/85 (54.12%), Postives = 60/85 (70.59%), Query Frame = 0
BLAST of Sed0018604 vs. ExPASy Swiss-Prot
Match: Q39261 (Zinc finger protein 2 OS=Arabidopsis thaliana OX=3702 GN=ZFP2 PE=1 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 8.1e-12 Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of Sed0018604 vs. ExPASy TrEMBL
Match: A0A0A0KPA2 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G548160 PE=4 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 5.5e-112 Identity = 213/250 (85.20%), Postives = 226/250 (90.40%), Query Frame = 0
BLAST of Sed0018604 vs. ExPASy TrEMBL
Match: A0A1S3CTQ8 (zinc finger protein 7-like OS=Cucumis melo OX=3656 GN=LOC103504366 PE=4 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 1.0e-110 Identity = 212/250 (84.80%), Postives = 226/250 (90.40%), Query Frame = 0
BLAST of Sed0018604 vs. ExPASy TrEMBL
Match: A0A5D3E1W6 (Zinc finger protein 7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold857G00040 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.8e-110 Identity = 212/250 (84.80%), Postives = 225/250 (90.00%), Query Frame = 0
BLAST of Sed0018604 vs. ExPASy TrEMBL
Match: A0A6J1JQ26 (zinc finger protein 7-like OS=Cucurbita maxima OX=3661 GN=LOC111487865 PE=4 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 6.7e-110 Identity = 213/252 (84.52%), Postives = 228/252 (90.48%), Query Frame = 0
BLAST of Sed0018604 vs. ExPASy TrEMBL
Match: A0A6J1E2E8 (zinc finger protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111430156 PE=4 SV=1) HSP 1 Score: 404.4 bits (1038), Expect = 3.3e-109 Identity = 214/254 (84.25%), Postives = 229/254 (90.16%), Query Frame = 0
BLAST of Sed0018604 vs. TAIR 10
Match: AT1G66140.1 (zinc finger protein 4 ) HSP 1 Score: 120.9 bits (302), Expect = 1.4e-27 Identity = 97/251 (38.65%), Postives = 127/251 (50.60%), Query Frame = 0
BLAST of Sed0018604 vs. TAIR 10
Match: AT1G24625.1 (zinc finger protein 7 ) HSP 1 Score: 110.2 bits (274), Expect = 2.5e-24 Identity = 84/224 (37.50%), Postives = 113/224 (50.45%), Query Frame = 0
BLAST of Sed0018604 vs. TAIR 10
Match: AT1G80730.1 (zinc-finger protein 1 ) HSP 1 Score: 96.3 bits (238), Expect = 3.7e-20 Identity = 61/146 (41.78%), Postives = 80/146 (54.79%), Query Frame = 0
BLAST of Sed0018604 vs. TAIR 10
Match: AT5G25160.1 (zinc finger protein 3 ) HSP 1 Score: 89.7 bits (221), Expect = 3.5e-18 Identity = 46/85 (54.12%), Postives = 60/85 (70.59%), Query Frame = 0
BLAST of Sed0018604 vs. TAIR 10
Match: AT5G10970.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 85.5 bits (210), Expect = 6.6e-17 Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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