Sed0018399 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAGAACAGTAGAAAAGAAAAAAGAATAAAAAAACATGAAGATTGAGAAAGAGATAACTCATCCGATCCACCCGCGTCACAAGCTGAGGCTCGAGTACACCGAGATCCCCTACAACTGTAGTGGGTGCAAAGAAGCTGGTATTGGCTACAAATACAAGTGCCAGCAATGTAGTTTCAGCTTGCACAAGGTTTGTGCTGTAGGTGCCACCAGAATCACCCATCCTTTCTATGAACAATGTGAATTTAAACTACACTATTATCCCCCTGGGAAAGGAAAGCGAGTATGCGACGCATGTAGAACTTATGTTCACGGATTTGTGTACCACTGCAATAGTTGTGATTTCGATCTCCATCCTTGTTGTGCAAACCTCCCACAAGTCCTTGATGATGGGAAACACAATCTCTACCTGTGTAACAAGCTCTCGAGCTCGTGTCACAGCTGCGGAGGAAAGGGACTCGGTTGGTCTTACAGGTCGCAGTGCAAGACCTATAACCTTCATCTGTCATGTGTGAAGGAGATGCTGGTGGAGAGCTGGCAAGCCATATATTTCAATGTGGATAAGAATAAGGTTAGGCAAATGTATACTACCATTCCAAGCCTCAAGGGATCGCTACAAAACCGTCCCGGGGCAAGAGGAACAGTCAAGAAGTGTAGTCAGATGGCTGGAACTGCAGCTCGTGCGATCATCTCCGCTATTCTCGGGGACCCTACAGCTATAGTAGCAGCTGTAATTAGTGGCATCATACCAAAGTAAGAGATAAGGGAATGCACAAATAATCATGCTAATGTTGGCAGTCATGTATCCTTGAATTTGTTTGTTTTGTAACTAACTAATAGTGTGTATAGGTAGGGATCTTTGTGCTAAATATTTGCTTCTATGAGTGTTATGTGATTGTTCATGCATTGGCCTTGGAGTTAACACTACTGTGTGTAGTGTGTATGCAAATAAAACTACTTAAGAAAAACGCTTGATGCCAGAGTGAAAAGGAAAAGTGTAGAATCAAGTCCCAAGTTCAAACTGATCTATTTGAGCAGAAAACAGAACTTCAACTATATGATTGCGCTCTTCAAGCTTTGTGATAGAACCCGGATTTATTGGTAAGTAAATCATAACGAACATATACGATAAGTCATATAATTCGAGGTACT GCAGAACAGTAGAAAAGAAAAAAGAATAAAAAAACATGAAGATTGAGAAAGAGATAACTCATCCGATCCACCCGCGTCACAAGCTGAGGCTCGAGTACACCGAGATCCCCTACAACTGTAGTGGGTGCAAAGAAGCTGGTATTGGCTACAAATACAAGTGCCAGCAATGTAGTTTCAGCTTGCACAAGGTTTGTGCTGTAGGTGCCACCAGAATCACCCATCCTTTCTATGAACAATGTGAATTTAAACTACACTATTATCCCCCTGGGAAAGGAAAGCGAGTATGCGACGCATGTAGAACTTATGTTCACGGATTTGTGTACCACTGCAATAGTTGTGATTTCGATCTCCATCCTTGTTGTGCAAACCTCCCACAAGTCCTTGATGATGGGAAACACAATCTCTACCTGTGTAACAAGCTCTCGAGCTCGTGTCACAGCTGCGGAGGAAAGGGACTCGGTTGGTCTTACAGGTCGCAGTGCAAGACCTATAACCTTCATCTGTCATGTGTGAAGGAGATGCTGGTGGAGAGCTGGCAAGCCATATATTTCAATGTGGATAAGAATAAGGTTAGGCAAATGTATACTACCATTCCAAGCCTCAAGGGATCGCTACAAAACCGTCCCGGGGCAAGAGGAACAGTCAAGAAGTGTAGTCAGATGGCTGGAACTGCAGCTCGTGCGATCATCTCCGCTATTCTCGGGGACCCTACAGCTATAGTAGCAGCTGTAATTAGTGGCATCATACCAAAGTAAGAGATAAGGGAATGCACAAATAATCATGCTAATGTTGGCAGTCATGTATCCTTGAATTTGTTTGTTTTGTAACTAACTAATAGTGTGTATAGGTAGGGATCTTTGTGCTAAATATTTGCTTCTATGAGTGTTATGTGATTGTTCATGCATTGGCCTTGGAGTTAACACTACTGTGTGTAGTGTGTATGCAAATAAAACTACTTAAGAAAAACGCTTGATGCCAGAGTGAAAAGGAAAAGTGTAGAATCAAGTCCCAAGTTCAAACTGATCTATTTGAGCAGAAAACAGAACTTCAACTATATGATTGCGCTCTTCAAGCTTTGTGATAGAACCCGGATTTATTGGTAAGTAAATCATAACGAACATATACGATAAGTCATATAATTCGAGGTACT ATGAAGATTGAGAAAGAGATAACTCATCCGATCCACCCGCGTCACAAGCTGAGGCTCGAGTACACCGAGATCCCCTACAACTGTAGTGGGTGCAAAGAAGCTGGTATTGGCTACAAATACAAGTGCCAGCAATGTAGTTTCAGCTTGCACAAGGTTTGTGCTGTAGGTGCCACCAGAATCACCCATCCTTTCTATGAACAATGTGAATTTAAACTACACTATTATCCCCCTGGGAAAGGAAAGCGAGTATGCGACGCATGTAGAACTTATGTTCACGGATTTGTGTACCACTGCAATAGTTGTGATTTCGATCTCCATCCTTGTTGTGCAAACCTCCCACAAGTCCTTGATGATGGGAAACACAATCTCTACCTGTGTAACAAGCTCTCGAGCTCGTGTCACAGCTGCGGAGGAAAGGGACTCGGTTGGTCTTACAGGTCGCAGTGCAAGACCTATAACCTTCATCTGTCATGTGTGAAGGAGATGCTGGTGGAGAGCTGGCAAGCCATATATTTCAATGTGGATAAGAATAAGGTTAGGCAAATGTATACTACCATTCCAAGCCTCAAGGGATCGCTACAAAACCGTCCCGGGGCAAGAGGAACAGTCAAGAAGTGTAGTCAGATGGCTGGAACTGCAGCTCGTGCGATCATCTCCGCTATTCTCGGGGACCCTACAGCTATAGTAGCAGCTGTAATTAGTGGCATCATACCAAAGTAA MKIEKEITHPIHPRHKLRLEYTEIPYNCSGCKEAGIGYKYKCQQCSFSLHKVCAVGATRITHPFYEQCEFKLHYYPPGKGKRVCDACRTYVHGFVYHCNSCDFDLHPCCANLPQVLDDGKHNLYLCNKLSSSCHSCGGKGLGWSYRSQCKTYNLHLSCVKEMLVESWQAIYFNVDKNKVRQMYTTIPSLKGSLQNRPGARGTVKKCSQMAGTAARAIISAILGDPTAIVAAVISGIIPK Homology
BLAST of Sed0018399 vs. NCBI nr
Match: XP_004139981.1 (uncharacterized protein LOC101214474 [Cucumis sativus] >KGN46638.1 hypothetical protein Csa_004969 [Cucumis sativus]) HSP 1 Score: 483.0 bits (1242), Expect = 1.5e-132 Identity = 224/239 (93.72%), Postives = 231/239 (96.65%), Query Frame = 0
BLAST of Sed0018399 vs. NCBI nr
Match: XP_008448154.1 (PREDICTED: uncharacterized protein LOC103490439 [Cucumis melo]) HSP 1 Score: 482.6 bits (1241), Expect = 1.9e-132 Identity = 222/239 (92.89%), Postives = 231/239 (96.65%), Query Frame = 0
BLAST of Sed0018399 vs. NCBI nr
Match: XP_038902379.1 (uncharacterized protein LOC120089016 [Benincasa hispida]) HSP 1 Score: 472.2 bits (1214), Expect = 2.6e-129 Identity = 216/237 (91.14%), Postives = 227/237 (95.78%), Query Frame = 0
BLAST of Sed0018399 vs. NCBI nr
Match: XP_022140473.1 (uncharacterized protein LOC111011137 [Momordica charantia]) HSP 1 Score: 471.5 bits (1212), Expect = 4.4e-129 Identity = 212/237 (89.45%), Postives = 226/237 (95.36%), Query Frame = 0
BLAST of Sed0018399 vs. NCBI nr
Match: KAA0047801.1 (DC1 domain-containing protein [Cucumis melo var. makuwa] >TYK01055.1 DC1 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 463.8 bits (1192), Expect = 9.2e-127 Identity = 213/229 (93.01%), Postives = 221/229 (96.51%), Query Frame = 0
BLAST of Sed0018399 vs. ExPASy Swiss-Prot
Match: Q7Y0E8 (Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405500 PE=2 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 2.4e-05 Identity = 20/51 (39.22%), Postives = 29/51 (56.86%), Query Frame = 0
BLAST of Sed0018399 vs. ExPASy Swiss-Prot
Match: O80763 (Probable nucleoredoxin 1 OS=Arabidopsis thaliana OX=3702 GN=At1g60420 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 7.1e-05 Identity = 19/51 (37.25%), Postives = 29/51 (56.86%), Query Frame = 0
BLAST of Sed0018399 vs. ExPASy TrEMBL
Match: A0A0A0KAV5 (Phorbol-ester/DAG-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G117200 PE=4 SV=1) HSP 1 Score: 483.0 bits (1242), Expect = 7.1e-133 Identity = 224/239 (93.72%), Postives = 231/239 (96.65%), Query Frame = 0
BLAST of Sed0018399 vs. ExPASy TrEMBL
Match: A0A1S3BJX3 (uncharacterized protein LOC103490439 OS=Cucumis melo OX=3656 GN=LOC103490439 PE=4 SV=1) HSP 1 Score: 482.6 bits (1241), Expect = 9.2e-133 Identity = 222/239 (92.89%), Postives = 231/239 (96.65%), Query Frame = 0
BLAST of Sed0018399 vs. ExPASy TrEMBL
Match: A0A6J1CI29 (uncharacterized protein LOC111011137 OS=Momordica charantia OX=3673 GN=LOC111011137 PE=4 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 2.1e-129 Identity = 212/237 (89.45%), Postives = 226/237 (95.36%), Query Frame = 0
BLAST of Sed0018399 vs. ExPASy TrEMBL
Match: A0A5A7U2M5 (DC1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00690 PE=4 SV=1) HSP 1 Score: 463.8 bits (1192), Expect = 4.4e-127 Identity = 213/229 (93.01%), Postives = 221/229 (96.51%), Query Frame = 0
BLAST of Sed0018399 vs. ExPASy TrEMBL
Match: A0A6J1I100 (uncharacterized protein LOC111469859 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111469859 PE=4 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 1.9e-117 Identity = 192/239 (80.33%), Postives = 217/239 (90.79%), Query Frame = 0
BLAST of Sed0018399 vs. TAIR 10
Match: AT2G16050.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 258.5 bits (659), Expect = 5.5e-69 Identity = 117/241 (48.55%), Postives = 159/241 (65.98%), Query Frame = 0
BLAST of Sed0018399 vs. TAIR 10
Match: AT2G37820.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 94.7 bits (234), Expect = 1.0e-19 Identity = 53/163 (32.52%), Postives = 75/163 (46.01%), Query Frame = 0
BLAST of Sed0018399 vs. TAIR 10
Match: AT2G37800.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 94.4 bits (233), Expect = 1.4e-19 Identity = 53/164 (32.32%), Postives = 76/164 (46.34%), Query Frame = 0
BLAST of Sed0018399 vs. TAIR 10
Match: AT2G37810.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 86.7 bits (213), Expect = 2.8e-17 Identity = 48/152 (31.58%), Postives = 68/152 (44.74%), Query Frame = 0
BLAST of Sed0018399 vs. TAIR 10
Match: AT1G65180.1 (Cysteine/Histidine-rich C1 domain family protein ) HSP 1 Score: 78.6 bits (192), Expect = 7.7e-15 Identity = 52/162 (32.10%), Postives = 69/162 (42.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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