Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATTGCCAATTTCAACAGTTTGTGTGATGTGAAGCTCAGCCAGAGAAATAGAGCAATTCCACAACCAACTTTCCCTTCTTTAAATCACAGGTAATTTCGTCATTTCATTTGTTTGAGAAATCTTATACAATTTGCTTGATTTTTGTTCGTTTTTCCCCTCCCATAGATCATTGAAGAATCAATTCAGAGCCATTGATTCAAAATTGGGTTTGTTTCTGCAAGAACTTGGGAATTGATTTGAACCAAAATCTCAACTCTATGTGCTTTTGGTTCTAATTTGTTCATCCCCATATTTGAATTGTTTCCTATAAATTTTGTATTGATGTTGGCAGAGATGGAGGTTTCAACTTCAGGATATGTCCAAAGATCAACTCTCCATCAAGCACCATTTTTCTCCTATTATAGAAGAGTAAGAGGAAAAAAGTAAATATTATTGACTCTGCTTTACTTTTTTATGTGAATTTGATGATATTTAAAAAAGTCTAATGGGATTTAAATCTAAAATAATAAAGGTGTGTTTAAGATGTGTTCACATATTATACTTAGTTGTCAATGTATGCTGTTCCAAATACCAATTTTTTTTAAACTTTCCTGATTCAAAATTTCAAATCAACCATATGGGCGCTCACACAGTTAAATGAATCTTCAAGGTTGGATTTCTGAATTAATATATAGCTTCATCCAAGTGTTAAGATGTTGATTTGTAGTGGCCAGAGTTTGACTTCAATTTTGAACCAGAATGGAGTTCCCAAGTGGCAGGATATCAAGATTCCATACCCTCGAGCGGTAAGCTAGCTCGTATTTCTTCCCGCTTTTAAATTAAACCGTGTTCTAAACTCCTTGTCCCAAAAGGACAGGTAGAGATTTCGAGTCTCCAACGTATGCTCATTTACAAATTTTGGGTTGGAAACCCAGGAATGAGCATAATTATAAAATTTATTGTTGAGGTCCAAACCTAGAAGGTGCGTTGTGTCCCGGATATGTAGTGGGTCGATGCTCCGATTTTCAGTTATCAAAAACAAACTTTACGTTTGTGGTTTCTACTTCTAGCTTCTTGTTGCATTTTTTCAAAAAGAAACTTATAGCTCAAAACTTTTTATATCAATCTTTATCTTAAGCTATTGACAATGATTTGATTTTAAACTTTGATAGCATGTTATGTATTATAAATAATGATTACTTTTGGTGCAAACTAATTGTTGATGTAATGGAGCATATCACAACCATGGGGTTAAATATCTCCATATCTTAGTGGCTTGGAACCTAAATAATCTTTGACCCTTTTTTTTTTTCTTTTGGGAGAGGGTGAGTTAAAATCAAAACCATTTGTAATGAGTAATTGCTCAAATTATTTCAGGATTGTTCACTCTCATTAGTTTAAGAACAATTTTTGTTAGTTCAACATTGACTTACCACATAAAATATGTTTGTTCTTAGCTTCTTTCTTATGTTCTTTATAATCACTACAGATTGTAGATCGATATCAATTGCAAGAAAAGCTTCAAAGTTCTTTAAATGGACTTGGTAAACATAATACACATTTCACACTTGCCTGTCCTCTTCTACCACAAGTAAGTTTCTTTTTCACACTAAAAGTAATTCTATCACTAAAAGCTAAATCTAAACTAAATTGTCCTCGAGGGCAACCCAGTGGTTGAGGTCTTTTTTTGAGAAATCTCTTGTTCGAGACGGTTGGAAAGCGCTTAAACTAGAATACCCTTCGAAGCATCCGGTGCCACAGTCTAGGGACGGGCCAGTGATGTCTTGGGTATAGGGGAGCGAAGCTCTGATTTCCCAATTTTCAAAAAAGAAAATTATCGAAACTAAATTACACATATCTTATGTACCTACTCATTTGGAAACCTCAAGTTTCTTCGGAAAAGTGACATCTAAGCAAGCTTATCTATTCTCTCTTTTTACTTGTTTTTTGTCAGGCTAGAACCACTAGTTTGATAGTTTTGGTTCCTCTTATAGTATTATGTGCTAGAAGCATAATCAGTGCCTCTTATGCTAGAGTTTTCGGATCATCGAGGTTTAAAATCGTTAATAAATCAGAGAGAGAACATCACAAGTTCAGAAGCGGCCATTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTTCGAATCCGAGTCAACGGTAGATTCCTCTGTAAGTTTTGTCAAATTTTGCTCTTCTTACCCAATTCAGCCTTTATATGAATGGTTTTTGTTCAGAGTGTTTTCTTGAGGAAGGTGTATTTATACTTCTTTTACTAGAGCAGAGGTAATACTTGCAATGAGAAATGGGAGGAAATTTGACTATCAATAAAGTTGTTGAATTGTTGCTTTCATTTCTCTGTGTATATCCTAATGGAGGTTTCTAGCCATCCACTTCCCTTTCTTCTGGTTGGCCTCATCTTTTTGTTTCAATAAGTTGATAATAGTGCCAAAATGGTAAAACTATCTTCACATAACATTGGATTTGCACATGGGTCGGGAACAATAAACAAAGATGGAGACAAGGCAGAAATATGTCAATGAGAGTGGGTTTAACATGGTAAAAAGTGTATATGTAGAAAACATTTTTACAAAATATGTTTCATATCAAAACAATACTCTTAGAAATCATTCTAAACTCAGCTGAACCTGTTGCACATAAGTAAAAAAAACTTGATTATGAATTCCCAAAGATTTGAGAGCGAGCTGCATATTTGCTCGATTCAAGCTTCTCGAGTCTTCGTTTGTCTTCAAGTTCCATTACTGCAAAAAGATTTCAATTTGGTAATAGCTTATACTATTCTTTTGCAGAGTGCTTTAGAAGAAGAACAGGTCTCAGTTGAAGAATTGTCACATGCTTACAAAAAACTGGACCAGGATTACAAAAGATTTCTATCAGAAAGTGGCCTTAGTAAATAG
mRNA sequence
ATGGCAATTGCCAATTTCAACAGTTTGTGTGATGTGAAGCTCAGCCAGAGAAATAGAGCAATTCCACAACCAACTTTCCCTTCTTTAAATCACAGATCATTGAAGAATCAATTCAGAGCCATTGATTCAAAATTGGGTTTATGGAGGTTTCAACTTCAGGATATGTCCAAAGATCAACTCTCCATCAAGCACCATTTTTCTCCTATTATAGAAGATGGCCAGAGTTTGACTTCAATTTTGAACCAGAATGGAGTTCCCAAGTGGCAGGATATCAAGATTCCATACCCTCGAGCGATTGTAGATCGATATCAATTGCAAGAAAAGCTTCAAAGTTCTTTAAATGGACTTGGTAAACATAATACACATTTCACACTTGCCTGTCCTCTTCTACCACAAGCTAGAACCACTAGTTTGATAGTTTTGGTTCCTCTTATAGTATTATGTGCTAGAAGCATAATCAGTGCCTCTTATGCTAGAGTTTTCGGATCATCGAGGTTTAAAATCGTTAATAAATCAGAGAGAGAACATCACAAGTTCAGAAGCGGCCATTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTTCGAATCCGAGTCAACGGTAGATTCCTCTAGTGCTTTAGAAGAAGAACAGGTCTCAGTTGAAGAATTGTCACATGCTTACAAAAAACTGGACCAGGATTACAAAAGATTTCTATCAGAAAGTGGCCTTAGTAAATAG
Coding sequence (CDS)
ATGGCAATTGCCAATTTCAACAGTTTGTGTGATGTGAAGCTCAGCCAGAGAAATAGAGCAATTCCACAACCAACTTTCCCTTCTTTAAATCACAGATCATTGAAGAATCAATTCAGAGCCATTGATTCAAAATTGGGTTTATGGAGGTTTCAACTTCAGGATATGTCCAAAGATCAACTCTCCATCAAGCACCATTTTTCTCCTATTATAGAAGATGGCCAGAGTTTGACTTCAATTTTGAACCAGAATGGAGTTCCCAAGTGGCAGGATATCAAGATTCCATACCCTCGAGCGATTGTAGATCGATATCAATTGCAAGAAAAGCTTCAAAGTTCTTTAAATGGACTTGGTAAACATAATACACATTTCACACTTGCCTGTCCTCTTCTACCACAAGCTAGAACCACTAGTTTGATAGTTTTGGTTCCTCTTATAGTATTATGTGCTAGAAGCATAATCAGTGCCTCTTATGCTAGAGTTTTCGGATCATCGAGGTTTAAAATCGTTAATAAATCAGAGAGAGAACATCACAAGTTCAGAAGCGGCCATTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTTCGAATCCGAGTCAACGGTAGATTCCTCTAGTGCTTTAGAAGAAGAACAGGTCTCAGTTGAAGAATTGTCACATGCTTACAAAAAACTGGACCAGGATTACAAAAGATTTCTATCAGAAAGTGGCCTTAGTAAATAG
Protein sequence
MAIANFNSLCDVKLSQRNRAIPQPTFPSLNHRSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVPKWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLSK
Homology
BLAST of Sed0018339 vs. NCBI nr
Match:
XP_038890844.1 (uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida])
HSP 1 Score: 267.7 bits (683), Expect = 9.7e-68
Identity = 158/266 (59.40%), Postives = 181/266 (68.05%), Query Frame = 0
Query: 11 DVKLSQRNRA---------IPQPTFPSLNH--------RSLKNQFRAIDSKLGLWRFQLQ 70
+VKLSQRNRA +PQPT PSL H +SLKNQFRAI + WRFQLQ
Sbjct: 2 EVKLSQRNRADRFFLFPKLLPQPTLPSLTHHRNWANTRKSLKNQFRAITLR---WRFQLQ 61
Query: 71 DMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP------------------KWQDIKIPY 130
D+SK+QLS KHH I+E +SLT NQNG P K Q+IKI
Sbjct: 62 DISKNQLSTKHHLVHIVEGSESLTLNPNQNGDPTHSISVANKRIKDTDLEQKGQNIKIQN 121
Query: 131 PRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISA 190
PRAI D YQL+EKLQS+LN L + F LA LP ARTTS IVLVPLIV CAR II A
Sbjct: 122 PRAIRDVYQLEEKLQSALNELRNYKKLFALASSHLPPARTTSFIVLVPLIVFCARCIIGA 181
Query: 191 SYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVS 242
SYARVFG+SR + V+K E +HHKFRSGHWRSALRDIRELDG + ES +DS S E+EQ+S
Sbjct: 182 SYARVFGTSRLETVDKREGKHHKFRSGHWRSALRDIRELDGLDCESPIDSMSPSEDEQIS 241
BLAST of Sed0018339 vs. NCBI nr
Match:
XP_022141747.1 (uncharacterized protein LOC111012032 isoform X3 [Momordica charantia])
HSP 1 Score: 253.8 bits (647), Expect = 1.5e-63
Identity = 152/267 (56.93%), Postives = 177/267 (66.29%), Query Frame = 0
Query: 11 DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQD 70
++K+SQRNRA +PQPT PS H RS KNQF A+ + WRFQLQD
Sbjct: 2 ELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALR---WRFQLQD 61
Query: 71 MSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP------------------KWQDIKIPYP 130
+ +DQ KHHF I+E G++ TSIL QNGV K QD KI P
Sbjct: 62 IPRDQSFTKHHFVRIVEGGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDSKIRNP 121
Query: 131 RAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISAS 190
AI D YQLQEKLQSSLNGL + F P LP ARTTS IVLVPLIV CAR II AS
Sbjct: 122 LAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARCIIGAS 181
Query: 191 YARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVD---SSSALEEEQ 241
YARV +S+ K ++KSE EHHKFRSGHWRSALRDIRELDG +SES+ D S+S +EQ
Sbjct: 182 YARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSVSNSPSVDEQ 241
BLAST of Sed0018339 vs. NCBI nr
Match:
XP_022141746.1 (uncharacterized protein LOC111012032 isoform X2 [Momordica charantia])
HSP 1 Score: 252.3 bits (643), Expect = 4.2e-63
Identity = 152/269 (56.51%), Postives = 176/269 (65.43%), Query Frame = 0
Query: 11 DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQD 70
++K+SQRNRA +PQPT PS H RS KNQF A+ + WRFQLQD
Sbjct: 2 ELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALR---WRFQLQD 61
Query: 71 MSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP------------------KWQDI 130
+ +DQ KHHF I+E G++ TSIL QNGV K QD
Sbjct: 62 IPRDQSFTKHHFVRIVEGCQLGRGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDS 121
Query: 131 KIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARS 190
KI P AI D YQLQEKLQSSLNGL + F P LP ARTTS IVLVPLIV CAR
Sbjct: 122 KIRNPLAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARC 181
Query: 191 IISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEE 241
II ASYARV +S+ K ++KSE EHHKFRSGHWRSALRDIRELDG +SES+ D SS +
Sbjct: 182 IIGASYARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSSPSVD 241
BLAST of Sed0018339 vs. NCBI nr
Match:
XP_008459633.1 (PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo])
HSP 1 Score: 248.1 bits (632), Expect = 8.0e-62
Identity = 145/266 (54.51%), Postives = 174/266 (65.41%), Query Frame = 0
Query: 11 DVKLSQRNRA-----IPQPTFPSL---------NHRSLKNQFRAIDSKLGLWRFQLQDMS 70
+VK+ QRNRA +P PT PSL +S NQ R I + WRFQL D+S
Sbjct: 2 EVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLR---WRFQLLDVS 61
Query: 71 KDQLSIKHHFSPIIEDGQSLTSILNQNGVP------------------KWQDIKIPYPRA 130
K QLS KHHF I+E +SL SI N+NG P K Q+IKI PR
Sbjct: 62 KHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRV 121
Query: 131 ---IVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISA 190
I D +QL+EKLQ++LNGL + F LA LP ARTTS IVLVPL++ C R II A
Sbjct: 122 VSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGA 181
Query: 191 SYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVS 242
SYARVFG+ + K +NK E E HKFRSGHWRSALRDIRELDG + E+ +DS+S E+EQ+S
Sbjct: 182 SYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQIS 241
BLAST of Sed0018339 vs. NCBI nr
Match:
XP_022141745.1 (uncharacterized protein LOC111012032 isoform X1 [Momordica charantia])
HSP 1 Score: 247.7 bits (631), Expect = 1.0e-61
Identity = 152/272 (55.88%), Postives = 177/272 (65.07%), Query Frame = 0
Query: 11 DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQD 70
++K+SQRNRA +PQPT PS H RS KNQF A+ + WRFQLQD
Sbjct: 2 ELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALR---WRFQLQD 61
Query: 71 MSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP------------------KWQDI 130
+ +DQ KHHF I+E G++ TSIL QNGV K QD
Sbjct: 62 IPRDQSFTKHHFVRIVEGCQLGRGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDS 121
Query: 131 KIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARS 190
KI P AI D YQLQEKLQSSLNGL + F P LP ARTTS IVLVPLIV CAR
Sbjct: 122 KIRNPLAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARC 181
Query: 191 IISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVD---SSSA 241
II ASYARV +S+ K ++KSE EHHKFRSGHWRSALRDIRELDG +SES+ D S+S
Sbjct: 182 IIGASYARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSVSNSP 241
BLAST of Sed0018339 vs. ExPASy TrEMBL
Match:
A0A6J1CKQ6 (uncharacterized protein LOC111012032 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111012032 PE=4 SV=1)
HSP 1 Score: 253.8 bits (647), Expect = 7.0e-64
Identity = 152/267 (56.93%), Postives = 177/267 (66.29%), Query Frame = 0
Query: 11 DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQD 70
++K+SQRNRA +PQPT PS H RS KNQF A+ + WRFQLQD
Sbjct: 2 ELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALR---WRFQLQD 61
Query: 71 MSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP------------------KWQDIKIPYP 130
+ +DQ KHHF I+E G++ TSIL QNGV K QD KI P
Sbjct: 62 IPRDQSFTKHHFVRIVEGGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDSKIRNP 121
Query: 131 RAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISAS 190
AI D YQLQEKLQSSLNGL + F P LP ARTTS IVLVPLIV CAR II AS
Sbjct: 122 LAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARCIIGAS 181
Query: 191 YARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVD---SSSALEEEQ 241
YARV +S+ K ++KSE EHHKFRSGHWRSALRDIRELDG +SES+ D S+S +EQ
Sbjct: 182 YARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSVSNSPSVDEQ 241
BLAST of Sed0018339 vs. ExPASy TrEMBL
Match:
A0A6J1CK58 (uncharacterized protein LOC111012032 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012032 PE=4 SV=1)
HSP 1 Score: 252.3 bits (643), Expect = 2.0e-63
Identity = 152/269 (56.51%), Postives = 176/269 (65.43%), Query Frame = 0
Query: 11 DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQD 70
++K+SQRNRA +PQPT PS H RS KNQF A+ + WRFQLQD
Sbjct: 2 ELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALR---WRFQLQD 61
Query: 71 MSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP------------------KWQDI 130
+ +DQ KHHF I+E G++ TSIL QNGV K QD
Sbjct: 62 IPRDQSFTKHHFVRIVEGCQLGRGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDS 121
Query: 131 KIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARS 190
KI P AI D YQLQEKLQSSLNGL + F P LP ARTTS IVLVPLIV CAR
Sbjct: 122 KIRNPLAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARC 181
Query: 191 IISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEE 241
II ASYARV +S+ K ++KSE EHHKFRSGHWRSALRDIRELDG +SES+ D SS +
Sbjct: 182 IIGASYARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSSPSVD 241
BLAST of Sed0018339 vs. ExPASy TrEMBL
Match:
A0A1S3CBV5 (uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)
HSP 1 Score: 248.1 bits (632), Expect = 3.9e-62
Identity = 145/266 (54.51%), Postives = 174/266 (65.41%), Query Frame = 0
Query: 11 DVKLSQRNRA-----IPQPTFPSL---------NHRSLKNQFRAIDSKLGLWRFQLQDMS 70
+VK+ QRNRA +P PT PSL +S NQ R I + WRFQL D+S
Sbjct: 2 EVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLR---WRFQLLDVS 61
Query: 71 KDQLSIKHHFSPIIEDGQSLTSILNQNGVP------------------KWQDIKIPYPRA 130
K QLS KHHF I+E +SL SI N+NG P K Q+IKI PR
Sbjct: 62 KHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRV 121
Query: 131 ---IVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISA 190
I D +QL+EKLQ++LNGL + F LA LP ARTTS IVLVPL++ C R II A
Sbjct: 122 VSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGA 181
Query: 191 SYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVS 242
SYARVFG+ + K +NK E E HKFRSGHWRSALRDIRELDG + E+ +DS+S E+EQ+S
Sbjct: 182 SYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQIS 241
BLAST of Sed0018339 vs. ExPASy TrEMBL
Match:
A0A6J1CIZ2 (uncharacterized protein LOC111012032 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012032 PE=4 SV=1)
HSP 1 Score: 247.7 bits (631), Expect = 5.0e-62
Identity = 152/272 (55.88%), Postives = 177/272 (65.07%), Query Frame = 0
Query: 11 DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQD 70
++K+SQRNRA +PQPT PS H RS KNQF A+ + WRFQLQD
Sbjct: 2 ELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALR---WRFQLQD 61
Query: 71 MSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP------------------KWQDI 130
+ +DQ KHHF I+E G++ TSIL QNGV K QD
Sbjct: 62 IPRDQSFTKHHFVRIVEGCQLGRGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDS 121
Query: 131 KIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARS 190
KI P AI D YQLQEKLQSSLNGL + F P LP ARTTS IVLVPLIV CAR
Sbjct: 122 KIRNPLAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARC 181
Query: 191 IISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVD---SSSA 241
II ASYARV +S+ K ++KSE EHHKFRSGHWRSALRDIRELDG +SES+ D S+S
Sbjct: 182 IIGASYARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSVSNSP 241
BLAST of Sed0018339 vs. ExPASy TrEMBL
Match:
A0A5A7T6Z4 (LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00440 PE=4 SV=1)
HSP 1 Score: 245.4 bits (625), Expect = 2.5e-61
Identity = 145/266 (54.51%), Postives = 173/266 (65.04%), Query Frame = 0
Query: 11 DVKLSQRNRA-----IPQPTFPSL---------NHRSLKNQFRAIDSKLGLWRFQLQDMS 70
+VK+ QRNRA +P PT PSL +S NQ R I + WRFQL D+S
Sbjct: 2 EVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLR---WRFQLLDVS 61
Query: 71 KDQLSIKHHFSPIIEDGQSLTSILNQNGVP------------------KWQDIKIPYPRA 130
K QLS KHHF I+E +SL SI N+NG P K Q+IKI RA
Sbjct: 62 KHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRA 121
Query: 131 ---IVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISA 190
I D +QL+EKLQS+LNGL + F LA LP ARTTS IVLVPL++ C R II A
Sbjct: 122 VSKIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGA 181
Query: 191 SYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVS 242
SYARVFG+ + K +NK E E HKFRSGHWRSALRDIRELDG + E+ +DS+S +EQ+S
Sbjct: 182 SYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQIS 241
BLAST of Sed0018339 vs. TAIR 10
Match:
AT4G09970.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15 proteins in 6 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 47.0 bits (110), Expect = 2.5e-05
Identity = 55/223 (24.66%), Postives = 95/223 (42.60%), Query Frame = 0
Query: 49 RFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVPKWQDIKIPYPRAIVDRYQLQEK 108
RF +Q MS+++ KH + + +SL IL Q GV ++ + + +D +EK
Sbjct: 37 RFCVQQMSENEQRTKHELARSAKRSESLRRILKQYGV-SVENPEESKTSSRLDDLDCEEK 96
Query: 109 ----LQSSLNGLGKHNTHFTLA----------------------CPLLPQARTTSLIV-L 168
S ++ K NT L +LP T L+ L
Sbjct: 97 HDAVTSSVIDDDSKMNTTEELPDLRRVEKYTETVGTADNLSGQNHQILPHLNTGVLLTSL 156
Query: 169 VPLIVLCARSIISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRE---LDGFE 228
+P++ C II + I+++ + H S WR+AL D E DG +
Sbjct: 157 LPVLGFCIICIIGTLHT---------IISRKTSQGHHHGSERWRTALMDWNEPLASDGHD 216
Query: 229 SESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLSK 242
S S ++ +E + +E++ AY +++ +YKRFL E G+ +
Sbjct: 217 SMSPEYRVASTNQEATATDEMNEAYSRVELEYKRFLLECGVGE 249
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038890844.1 | 9.7e-68 | 59.40 | uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida] | [more] |
XP_022141747.1 | 1.5e-63 | 56.93 | uncharacterized protein LOC111012032 isoform X3 [Momordica charantia] | [more] |
XP_022141746.1 | 4.2e-63 | 56.51 | uncharacterized protein LOC111012032 isoform X2 [Momordica charantia] | [more] |
XP_008459633.1 | 8.0e-62 | 54.51 | PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo] | [more] |
XP_022141745.1 | 1.0e-61 | 55.88 | uncharacterized protein LOC111012032 isoform X1 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CKQ6 | 7.0e-64 | 56.93 | uncharacterized protein LOC111012032 isoform X3 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1CK58 | 2.0e-63 | 56.51 | uncharacterized protein LOC111012032 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A1S3CBV5 | 3.9e-62 | 54.51 | uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A6J1CIZ2 | 5.0e-62 | 55.88 | uncharacterized protein LOC111012032 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A5A7T6Z4 | 2.5e-61 | 54.51 | LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... | [more] |
Match Name | E-value | Identity | Description | |
AT4G09970.1 | 2.5e-05 | 24.66 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXP... | [more] |