Sed0018339 (gene) Chayote v1

Overview
NameSed0018339
Typegene
OrganismSechium edule (Chayote v1)
DescriptionLysM domain-containing protein
LocationLG10: 32435676 .. 32438582 (+)
RNA-Seq ExpressionSed0018339
SyntenySed0018339
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATTGCCAATTTCAACAGTTTGTGTGATGTGAAGCTCAGCCAGAGAAATAGAGCAATTCCACAACCAACTTTCCCTTCTTTAAATCACAGGTAATTTCGTCATTTCATTTGTTTGAGAAATCTTATACAATTTGCTTGATTTTTGTTCGTTTTTCCCCTCCCATAGATCATTGAAGAATCAATTCAGAGCCATTGATTCAAAATTGGGTTTGTTTCTGCAAGAACTTGGGAATTGATTTGAACCAAAATCTCAACTCTATGTGCTTTTGGTTCTAATTTGTTCATCCCCATATTTGAATTGTTTCCTATAAATTTTGTATTGATGTTGGCAGAGATGGAGGTTTCAACTTCAGGATATGTCCAAAGATCAACTCTCCATCAAGCACCATTTTTCTCCTATTATAGAAGAGTAAGAGGAAAAAAGTAAATATTATTGACTCTGCTTTACTTTTTTATGTGAATTTGATGATATTTAAAAAAGTCTAATGGGATTTAAATCTAAAATAATAAAGGTGTGTTTAAGATGTGTTCACATATTATACTTAGTTGTCAATGTATGCTGTTCCAAATACCAATTTTTTTTAAACTTTCCTGATTCAAAATTTCAAATCAACCATATGGGCGCTCACACAGTTAAATGAATCTTCAAGGTTGGATTTCTGAATTAATATATAGCTTCATCCAAGTGTTAAGATGTTGATTTGTAGTGGCCAGAGTTTGACTTCAATTTTGAACCAGAATGGAGTTCCCAAGTGGCAGGATATCAAGATTCCATACCCTCGAGCGGTAAGCTAGCTCGTATTTCTTCCCGCTTTTAAATTAAACCGTGTTCTAAACTCCTTGTCCCAAAAGGACAGGTAGAGATTTCGAGTCTCCAACGTATGCTCATTTACAAATTTTGGGTTGGAAACCCAGGAATGAGCATAATTATAAAATTTATTGTTGAGGTCCAAACCTAGAAGGTGCGTTGTGTCCCGGATATGTAGTGGGTCGATGCTCCGATTTTCAGTTATCAAAAACAAACTTTACGTTTGTGGTTTCTACTTCTAGCTTCTTGTTGCATTTTTTCAAAAAGAAACTTATAGCTCAAAACTTTTTATATCAATCTTTATCTTAAGCTATTGACAATGATTTGATTTTAAACTTTGATAGCATGTTATGTATTATAAATAATGATTACTTTTGGTGCAAACTAATTGTTGATGTAATGGAGCATATCACAACCATGGGGTTAAATATCTCCATATCTTAGTGGCTTGGAACCTAAATAATCTTTGACCCTTTTTTTTTTTCTTTTGGGAGAGGGTGAGTTAAAATCAAAACCATTTGTAATGAGTAATTGCTCAAATTATTTCAGGATTGTTCACTCTCATTAGTTTAAGAACAATTTTTGTTAGTTCAACATTGACTTACCACATAAAATATGTTTGTTCTTAGCTTCTTTCTTATGTTCTTTATAATCACTACAGATTGTAGATCGATATCAATTGCAAGAAAAGCTTCAAAGTTCTTTAAATGGACTTGGTAAACATAATACACATTTCACACTTGCCTGTCCTCTTCTACCACAAGTAAGTTTCTTTTTCACACTAAAAGTAATTCTATCACTAAAAGCTAAATCTAAACTAAATTGTCCTCGAGGGCAACCCAGTGGTTGAGGTCTTTTTTTGAGAAATCTCTTGTTCGAGACGGTTGGAAAGCGCTTAAACTAGAATACCCTTCGAAGCATCCGGTGCCACAGTCTAGGGACGGGCCAGTGATGTCTTGGGTATAGGGGAGCGAAGCTCTGATTTCCCAATTTTCAAAAAAGAAAATTATCGAAACTAAATTACACATATCTTATGTACCTACTCATTTGGAAACCTCAAGTTTCTTCGGAAAAGTGACATCTAAGCAAGCTTATCTATTCTCTCTTTTTACTTGTTTTTTGTCAGGCTAGAACCACTAGTTTGATAGTTTTGGTTCCTCTTATAGTATTATGTGCTAGAAGCATAATCAGTGCCTCTTATGCTAGAGTTTTCGGATCATCGAGGTTTAAAATCGTTAATAAATCAGAGAGAGAACATCACAAGTTCAGAAGCGGCCATTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTTCGAATCCGAGTCAACGGTAGATTCCTCTGTAAGTTTTGTCAAATTTTGCTCTTCTTACCCAATTCAGCCTTTATATGAATGGTTTTTGTTCAGAGTGTTTTCTTGAGGAAGGTGTATTTATACTTCTTTTACTAGAGCAGAGGTAATACTTGCAATGAGAAATGGGAGGAAATTTGACTATCAATAAAGTTGTTGAATTGTTGCTTTCATTTCTCTGTGTATATCCTAATGGAGGTTTCTAGCCATCCACTTCCCTTTCTTCTGGTTGGCCTCATCTTTTTGTTTCAATAAGTTGATAATAGTGCCAAAATGGTAAAACTATCTTCACATAACATTGGATTTGCACATGGGTCGGGAACAATAAACAAAGATGGAGACAAGGCAGAAATATGTCAATGAGAGTGGGTTTAACATGGTAAAAAGTGTATATGTAGAAAACATTTTTACAAAATATGTTTCATATCAAAACAATACTCTTAGAAATCATTCTAAACTCAGCTGAACCTGTTGCACATAAGTAAAAAAAACTTGATTATGAATTCCCAAAGATTTGAGAGCGAGCTGCATATTTGCTCGATTCAAGCTTCTCGAGTCTTCGTTTGTCTTCAAGTTCCATTACTGCAAAAAGATTTCAATTTGGTAATAGCTTATACTATTCTTTTGCAGAGTGCTTTAGAAGAAGAACAGGTCTCAGTTGAAGAATTGTCACATGCTTACAAAAAACTGGACCAGGATTACAAAAGATTTCTATCAGAAAGTGGCCTTAGTAAATAG

mRNA sequence

ATGGCAATTGCCAATTTCAACAGTTTGTGTGATGTGAAGCTCAGCCAGAGAAATAGAGCAATTCCACAACCAACTTTCCCTTCTTTAAATCACAGATCATTGAAGAATCAATTCAGAGCCATTGATTCAAAATTGGGTTTATGGAGGTTTCAACTTCAGGATATGTCCAAAGATCAACTCTCCATCAAGCACCATTTTTCTCCTATTATAGAAGATGGCCAGAGTTTGACTTCAATTTTGAACCAGAATGGAGTTCCCAAGTGGCAGGATATCAAGATTCCATACCCTCGAGCGATTGTAGATCGATATCAATTGCAAGAAAAGCTTCAAAGTTCTTTAAATGGACTTGGTAAACATAATACACATTTCACACTTGCCTGTCCTCTTCTACCACAAGCTAGAACCACTAGTTTGATAGTTTTGGTTCCTCTTATAGTATTATGTGCTAGAAGCATAATCAGTGCCTCTTATGCTAGAGTTTTCGGATCATCGAGGTTTAAAATCGTTAATAAATCAGAGAGAGAACATCACAAGTTCAGAAGCGGCCATTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTTCGAATCCGAGTCAACGGTAGATTCCTCTAGTGCTTTAGAAGAAGAACAGGTCTCAGTTGAAGAATTGTCACATGCTTACAAAAAACTGGACCAGGATTACAAAAGATTTCTATCAGAAAGTGGCCTTAGTAAATAG

Coding sequence (CDS)

ATGGCAATTGCCAATTTCAACAGTTTGTGTGATGTGAAGCTCAGCCAGAGAAATAGAGCAATTCCACAACCAACTTTCCCTTCTTTAAATCACAGATCATTGAAGAATCAATTCAGAGCCATTGATTCAAAATTGGGTTTATGGAGGTTTCAACTTCAGGATATGTCCAAAGATCAACTCTCCATCAAGCACCATTTTTCTCCTATTATAGAAGATGGCCAGAGTTTGACTTCAATTTTGAACCAGAATGGAGTTCCCAAGTGGCAGGATATCAAGATTCCATACCCTCGAGCGATTGTAGATCGATATCAATTGCAAGAAAAGCTTCAAAGTTCTTTAAATGGACTTGGTAAACATAATACACATTTCACACTTGCCTGTCCTCTTCTACCACAAGCTAGAACCACTAGTTTGATAGTTTTGGTTCCTCTTATAGTATTATGTGCTAGAAGCATAATCAGTGCCTCTTATGCTAGAGTTTTCGGATCATCGAGGTTTAAAATCGTTAATAAATCAGAGAGAGAACATCACAAGTTCAGAAGCGGCCATTGGAGATCTGCTCTTCGTGATATAAGGGAATTGGATGGTTTCGAATCCGAGTCAACGGTAGATTCCTCTAGTGCTTTAGAAGAAGAACAGGTCTCAGTTGAAGAATTGTCACATGCTTACAAAAAACTGGACCAGGATTACAAAAGATTTCTATCAGAAAGTGGCCTTAGTAAATAG

Protein sequence

MAIANFNSLCDVKLSQRNRAIPQPTFPSLNHRSLKNQFRAIDSKLGLWRFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVPKWQDIKIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLSK
Homology
BLAST of Sed0018339 vs. NCBI nr
Match: XP_038890844.1 (uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida])

HSP 1 Score: 267.7 bits (683), Expect = 9.7e-68
Identity = 158/266 (59.40%), Postives = 181/266 (68.05%), Query Frame = 0

Query: 11  DVKLSQRNRA---------IPQPTFPSLNH--------RSLKNQFRAIDSKLGLWRFQLQ 70
           +VKLSQRNRA         +PQPT PSL H        +SLKNQFRAI  +   WRFQLQ
Sbjct: 2   EVKLSQRNRADRFFLFPKLLPQPTLPSLTHHRNWANTRKSLKNQFRAITLR---WRFQLQ 61

Query: 71  DMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP------------------KWQDIKIPY 130
           D+SK+QLS KHH   I+E  +SLT   NQNG P                  K Q+IKI  
Sbjct: 62  DISKNQLSTKHHLVHIVEGSESLTLNPNQNGDPTHSISVANKRIKDTDLEQKGQNIKIQN 121

Query: 131 PRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISA 190
           PRAI D YQL+EKLQS+LN L  +   F LA   LP ARTTS IVLVPLIV CAR II A
Sbjct: 122 PRAIRDVYQLEEKLQSALNELRNYKKLFALASSHLPPARTTSFIVLVPLIVFCARCIIGA 181

Query: 191 SYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVS 242
           SYARVFG+SR + V+K E +HHKFRSGHWRSALRDIRELDG + ES +DS S  E+EQ+S
Sbjct: 182 SYARVFGTSRLETVDKREGKHHKFRSGHWRSALRDIRELDGLDCESPIDSMSPSEDEQIS 241

BLAST of Sed0018339 vs. NCBI nr
Match: XP_022141747.1 (uncharacterized protein LOC111012032 isoform X3 [Momordica charantia])

HSP 1 Score: 253.8 bits (647), Expect = 1.5e-63
Identity = 152/267 (56.93%), Postives = 177/267 (66.29%), Query Frame = 0

Query: 11  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQD 70
           ++K+SQRNRA         +PQPT PS  H       RS KNQF A+  +   WRFQLQD
Sbjct: 2   ELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALR---WRFQLQD 61

Query: 71  MSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP------------------KWQDIKIPYP 130
           + +DQ   KHHF  I+E G++ TSIL QNGV                   K QD KI  P
Sbjct: 62  IPRDQSFTKHHFVRIVEGGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDSKIRNP 121

Query: 131 RAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISAS 190
            AI D YQLQEKLQSSLNGL  +   F    P LP ARTTS IVLVPLIV CAR II AS
Sbjct: 122 LAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARCIIGAS 181

Query: 191 YARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVD---SSSALEEEQ 241
           YARV  +S+ K ++KSE EHHKFRSGHWRSALRDIRELDG +SES+ D   S+S   +EQ
Sbjct: 182 YARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSVSNSPSVDEQ 241

BLAST of Sed0018339 vs. NCBI nr
Match: XP_022141746.1 (uncharacterized protein LOC111012032 isoform X2 [Momordica charantia])

HSP 1 Score: 252.3 bits (643), Expect = 4.2e-63
Identity = 152/269 (56.51%), Postives = 176/269 (65.43%), Query Frame = 0

Query: 11  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQD 70
           ++K+SQRNRA         +PQPT PS  H       RS KNQF A+  +   WRFQLQD
Sbjct: 2   ELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALR---WRFQLQD 61

Query: 71  MSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP------------------KWQDI 130
           + +DQ   KHHF  I+E      G++ TSIL QNGV                   K QD 
Sbjct: 62  IPRDQSFTKHHFVRIVEGCQLGRGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDS 121

Query: 131 KIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARS 190
           KI  P AI D YQLQEKLQSSLNGL  +   F    P LP ARTTS IVLVPLIV CAR 
Sbjct: 122 KIRNPLAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARC 181

Query: 191 IISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEE 241
           II ASYARV  +S+ K ++KSE EHHKFRSGHWRSALRDIRELDG +SES+ D SS   +
Sbjct: 182 IIGASYARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSSPSVD 241

BLAST of Sed0018339 vs. NCBI nr
Match: XP_008459633.1 (PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo])

HSP 1 Score: 248.1 bits (632), Expect = 8.0e-62
Identity = 145/266 (54.51%), Postives = 174/266 (65.41%), Query Frame = 0

Query: 11  DVKLSQRNRA-----IPQPTFPSL---------NHRSLKNQFRAIDSKLGLWRFQLQDMS 70
           +VK+ QRNRA     +P PT PSL           +S  NQ R I  +   WRFQL D+S
Sbjct: 2   EVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLR---WRFQLLDVS 61

Query: 71  KDQLSIKHHFSPIIEDGQSLTSILNQNGVP------------------KWQDIKIPYPRA 130
           K QLS KHHF  I+E  +SL SI N+NG P                  K Q+IKI  PR 
Sbjct: 62  KHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRV 121

Query: 131 ---IVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISA 190
              I D +QL+EKLQ++LNGL  +   F LA   LP ARTTS IVLVPL++ C R II A
Sbjct: 122 VSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGA 181

Query: 191 SYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVS 242
           SYARVFG+ + K +NK E E HKFRSGHWRSALRDIRELDG + E+ +DS+S  E+EQ+S
Sbjct: 182 SYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQIS 241

BLAST of Sed0018339 vs. NCBI nr
Match: XP_022141745.1 (uncharacterized protein LOC111012032 isoform X1 [Momordica charantia])

HSP 1 Score: 247.7 bits (631), Expect = 1.0e-61
Identity = 152/272 (55.88%), Postives = 177/272 (65.07%), Query Frame = 0

Query: 11  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQD 70
           ++K+SQRNRA         +PQPT PS  H       RS KNQF A+  +   WRFQLQD
Sbjct: 2   ELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALR---WRFQLQD 61

Query: 71  MSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP------------------KWQDI 130
           + +DQ   KHHF  I+E      G++ TSIL QNGV                   K QD 
Sbjct: 62  IPRDQSFTKHHFVRIVEGCQLGRGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDS 121

Query: 131 KIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARS 190
           KI  P AI D YQLQEKLQSSLNGL  +   F    P LP ARTTS IVLVPLIV CAR 
Sbjct: 122 KIRNPLAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARC 181

Query: 191 IISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVD---SSSA 241
           II ASYARV  +S+ K ++KSE EHHKFRSGHWRSALRDIRELDG +SES+ D   S+S 
Sbjct: 182 IIGASYARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSVSNSP 241

BLAST of Sed0018339 vs. ExPASy TrEMBL
Match: A0A6J1CKQ6 (uncharacterized protein LOC111012032 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111012032 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 7.0e-64
Identity = 152/267 (56.93%), Postives = 177/267 (66.29%), Query Frame = 0

Query: 11  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQD 70
           ++K+SQRNRA         +PQPT PS  H       RS KNQF A+  +   WRFQLQD
Sbjct: 2   ELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALR---WRFQLQD 61

Query: 71  MSKDQLSIKHHFSPIIEDGQSLTSILNQNGVP------------------KWQDIKIPYP 130
           + +DQ   KHHF  I+E G++ TSIL QNGV                   K QD KI  P
Sbjct: 62  IPRDQSFTKHHFVRIVEGGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDSKIRNP 121

Query: 131 RAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISAS 190
            AI D YQLQEKLQSSLNGL  +   F    P LP ARTTS IVLVPLIV CAR II AS
Sbjct: 122 LAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARCIIGAS 181

Query: 191 YARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVD---SSSALEEEQ 241
           YARV  +S+ K ++KSE EHHKFRSGHWRSALRDIRELDG +SES+ D   S+S   +EQ
Sbjct: 182 YARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSVSNSPSVDEQ 241

BLAST of Sed0018339 vs. ExPASy TrEMBL
Match: A0A6J1CK58 (uncharacterized protein LOC111012032 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111012032 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 2.0e-63
Identity = 152/269 (56.51%), Postives = 176/269 (65.43%), Query Frame = 0

Query: 11  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQD 70
           ++K+SQRNRA         +PQPT PS  H       RS KNQF A+  +   WRFQLQD
Sbjct: 2   ELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALR---WRFQLQD 61

Query: 71  MSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP------------------KWQDI 130
           + +DQ   KHHF  I+E      G++ TSIL QNGV                   K QD 
Sbjct: 62  IPRDQSFTKHHFVRIVEGCQLGRGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDS 121

Query: 131 KIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARS 190
           KI  P AI D YQLQEKLQSSLNGL  +   F    P LP ARTTS IVLVPLIV CAR 
Sbjct: 122 KIRNPLAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARC 181

Query: 191 IISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEE 241
           II ASYARV  +S+ K ++KSE EHHKFRSGHWRSALRDIRELDG +SES+ D SS   +
Sbjct: 182 IIGASYARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSSPSVD 241

BLAST of Sed0018339 vs. ExPASy TrEMBL
Match: A0A1S3CBV5 (uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498697 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 3.9e-62
Identity = 145/266 (54.51%), Postives = 174/266 (65.41%), Query Frame = 0

Query: 11  DVKLSQRNRA-----IPQPTFPSL---------NHRSLKNQFRAIDSKLGLWRFQLQDMS 70
           +VK+ QRNRA     +P PT PSL           +S  NQ R I  +   WRFQL D+S
Sbjct: 2   EVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLR---WRFQLLDVS 61

Query: 71  KDQLSIKHHFSPIIEDGQSLTSILNQNGVP------------------KWQDIKIPYPRA 130
           K QLS KHHF  I+E  +SL SI N+NG P                  K Q+IKI  PR 
Sbjct: 62  KHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDPEQKGQNIKIQNPRV 121

Query: 131 ---IVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISA 190
              I D +QL+EKLQ++LNGL  +   F LA   LP ARTTS IVLVPL++ C R II A
Sbjct: 122 VSKIRDAFQLEEKLQNALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGA 181

Query: 191 SYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVS 242
           SYARVFG+ + K +NK E E HKFRSGHWRSALRDIRELDG + E+ +DS+S  E+EQ+S
Sbjct: 182 SYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSEDEQIS 241

BLAST of Sed0018339 vs. ExPASy TrEMBL
Match: A0A6J1CIZ2 (uncharacterized protein LOC111012032 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111012032 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 5.0e-62
Identity = 152/272 (55.88%), Postives = 177/272 (65.07%), Query Frame = 0

Query: 11  DVKLSQRNRA---------IPQPTFPSLNH-------RSLKNQFRAIDSKLGLWRFQLQD 70
           ++K+SQRNRA         +PQPT PS  H       RS KNQF A+  +   WRFQLQD
Sbjct: 2   ELKVSQRNRADRFSLLPKLLPQPTLPSQTHRTWAYAKRSSKNQFGAVALR---WRFQLQD 61

Query: 71  MSKDQLSIKHHFSPIIED-----GQSLTSILNQNGVP------------------KWQDI 130
           + +DQ   KHHF  I+E      G++ TSIL QNGV                   K QD 
Sbjct: 62  IPRDQSFTKHHFVRIVEGCQLGRGETFTSILKQNGVSTHSIVIVNRKIGDTDLEHKGQDS 121

Query: 131 KIPYPRAIVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARS 190
           KI  P AI D YQLQEKLQSSLNGL  +   F    P LP ARTTS IVLVPLIV CAR 
Sbjct: 122 KIRNPLAIRDVYQLQEKLQSSLNGLQNYKKLFLHVSPRLPPARTTSFIVLVPLIVFCARC 181

Query: 191 IISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVD---SSSA 241
           II ASYARV  +S+ K ++KSE EHHKFRSGHWRSALRDIRELDG +SES+ D   S+S 
Sbjct: 182 IIGASYARVSKTSKLKTIDKSEGEHHKFRSGHWRSALRDIRELDGLDSESSTDPSVSNSP 241

BLAST of Sed0018339 vs. ExPASy TrEMBL
Match: A0A5A7T6Z4 (LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00440 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.5e-61
Identity = 145/266 (54.51%), Postives = 173/266 (65.04%), Query Frame = 0

Query: 11  DVKLSQRNRA-----IPQPTFPSL---------NHRSLKNQFRAIDSKLGLWRFQLQDMS 70
           +VK+ QRNRA     +P PT PSL           +S  NQ R I  +   WRFQL D+S
Sbjct: 2   EVKVRQRNRAHRFSLLPHPTLPSLTLSLRNWANTKKSFNNQLRGISLR---WRFQLLDVS 61

Query: 71  KDQLSIKHHFSPIIEDGQSLTSILNQNGVP------------------KWQDIKIPYPRA 130
           K QLS KHHF  I+E  +SL SI N+NG P                  K Q+IKI   RA
Sbjct: 62  KHQLSTKHHFVHILEGNESLASISNKNGDPPNSIVIDNKKIVDTDLEQKGQNIKIQNSRA 121

Query: 131 ---IVDRYQLQEKLQSSLNGLGKHNTHFTLACPLLPQARTTSLIVLVPLIVLCARSIISA 190
              I D +QL+EKLQS+LNGL  +   F LA   LP ARTTS IVLVPL++ C R II A
Sbjct: 122 VSKIRDAFQLEEKLQSALNGLQIYKKLFALASSRLPPARTTSFIVLVPLVIFCTRCIIGA 181

Query: 191 SYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRELDGFESESTVDSSSALEEEQVS 242
           SYARVFG+ + K +NK E E HKFRSGHWRSALRDIRELDG + E+ +DS+S   +EQ+S
Sbjct: 182 SYARVFGTLKLKAINKQEGERHKFRSGHWRSALRDIRELDGLDCEAPIDSTSPSADEQIS 241

BLAST of Sed0018339 vs. TAIR 10
Match: AT4G09970.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; Has 15 Blast hits to 15 proteins in 6 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 2.5e-05
Identity = 55/223 (24.66%), Postives = 95/223 (42.60%), Query Frame = 0

Query: 49  RFQLQDMSKDQLSIKHHFSPIIEDGQSLTSILNQNGVPKWQDIKIPYPRAIVDRYQLQEK 108
           RF +Q MS+++   KH  +   +  +SL  IL Q GV   ++ +     + +D    +EK
Sbjct: 37  RFCVQQMSENEQRTKHELARSAKRSESLRRILKQYGV-SVENPEESKTSSRLDDLDCEEK 96

Query: 109 ----LQSSLNGLGKHNTHFTLA----------------------CPLLPQARTTSLIV-L 168
                 S ++   K NT   L                         +LP   T  L+  L
Sbjct: 97  HDAVTSSVIDDDSKMNTTEELPDLRRVEKYTETVGTADNLSGQNHQILPHLNTGVLLTSL 156

Query: 169 VPLIVLCARSIISASYARVFGSSRFKIVNKSEREHHKFRSGHWRSALRDIRE---LDGFE 228
           +P++  C   II   +          I+++   + H   S  WR+AL D  E    DG +
Sbjct: 157 LPVLGFCIICIIGTLHT---------IISRKTSQGHHHGSERWRTALMDWNEPLASDGHD 216

Query: 229 SESTVDSSSALEEEQVSVEELSHAYKKLDQDYKRFLSESGLSK 242
           S S     ++  +E  + +E++ AY +++ +YKRFL E G+ +
Sbjct: 217 SMSPEYRVASTNQEATATDEMNEAYSRVELEYKRFLLECGVGE 249

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038890844.19.7e-6859.40uncharacterized protein LOC120080288 isoform X1 [Benincasa hispida][more]
XP_022141747.11.5e-6356.93uncharacterized protein LOC111012032 isoform X3 [Momordica charantia][more]
XP_022141746.14.2e-6356.51uncharacterized protein LOC111012032 isoform X2 [Momordica charantia][more]
XP_008459633.18.0e-6254.51PREDICTED: uncharacterized protein LOC103498697 isoform X2 [Cucumis melo][more]
XP_022141745.11.0e-6155.88uncharacterized protein LOC111012032 isoform X1 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CKQ67.0e-6456.93uncharacterized protein LOC111012032 isoform X3 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CK582.0e-6356.51uncharacterized protein LOC111012032 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A1S3CBV53.9e-6254.51uncharacterized protein LOC103498697 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A6J1CIZ25.0e-6255.88uncharacterized protein LOC111012032 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A5A7T6Z42.5e-6154.51LysM domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
Match NameE-valueIdentityDescription
AT4G09970.12.5e-0524.66unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXP... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 209..236

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0018339.1Sed0018339.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane