Sed0018271 (gene) Chayote v1

Overview


Name	Sed0018271
Type	gene
Organism	Sechium edule (Chayote v1)
Description	MFP1 attachment factor 1-like
Location	LG10: 25556578 .. 25557484 (+)
RNA-Seq Expression	Sed0018271
Synteny	Sed0018271

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTGAACAACAAGATCGCTAATAATAATAATGATGATTTATCGGTGAGACATTATGATCATCACCACCTTCACCGCACATAGCGATCGATTCGATTCCAGAAGGAGGTGATCCGTCGTTTTAACTTTACCAACAAATAAACACACATAATTTCGTAACCGATCCGATTCTTCCCCAAATTTCCATATTTAATCCACATCTCATTTTCCTCAACCCCAGATTCACCTCCCCTTCTCCGCCATGTCCGATCCACAGAACTCCATTCCGGCAGAGGCAGAATATGCAGAGCCCGAAATCAAAGAACCCATCAAACCATCGGCCGCCAAATTCAGCATATGGCCACCAACGCAGCGCACTCGCGACGCCGTCATCCATCGCCTGATCGAAACCCTGTCCGCCCCTTCCATTCTCTCCAAGCGTTACGGCACCATTCCGCCGGACCAGGCCGACGCCGTCGCAACGGACATTGAGAAGGACGCCTTCGCCACCGCCGACGCCTCTCCGCCCACCGGCGGCGACGGCATCGAGATTCTGCAGCTCTACTCCAAGGAGATCAGTAAGCGCATGCTCGACACCGTCAAGGCCCGACCCGTTAATGCTGATGAGAAGGAAGGATTAACATCGCCAGTTGTTGAAACTGCAACCTGAAGTTTCTAGCATTTTGGGTCTTAATGTTATTGAATTTGGGGTTTTGTTGTTGTTGCCCTGTTTGAGTTTCTCTTATCTGCTTAGTTCACTGTCCCCACATTGCTTACAACATATAATTATCTGTTCTTGAGTTCTATGACTTATGCAATGTTTCTGCGTTGAGATTTCTTCATTCATCAATGTGGCTTCAATTTTTTTATTAGTTTCTTTATATTGGTTGGAATTGAAGAGGTTTCTAGAAAGGGCGTCTCTTTTTTAA

mRNA sequence

AATTGAACAACAAGATCGCTAATAATAATAATGATGATTTATCGGTGAGACATTATGATCATCACCACCTTCACCGCACATAGCGATCGATTCGATTCCAGAAGGAGGTGATCCGTCGTTTTAACTTTACCAACAAATAAACACACATAATTTCGTAACCGATCCGATTCTTCCCCAAATTTCCATATTTAATCCACATCTCATTTTCCTCAACCCCAGATTCACCTCCCCTTCTCCGCCATGTCCGATCCACAGAACTCCATTCCGGCAGAGGCAGAATATGCAGAGCCCGAAATCAAAGAACCCATCAAACCATCGGCCGCCAAATTCAGCATATGGCCACCAACGCAGCGCACTCGCGACGCCGTCATCCATCGCCTGATCGAAACCCTGTCCGCCCCTTCCATTCTCTCCAAGCGTTACGGCACCATTCCGCCGGACCAGGCCGACGCCGTCGCAACGGACATTGAGAAGGACGCCTTCGCCACCGCCGACGCCTCTCCGCCCACCGGCGGCGACGGCATCGAGATTCTGCAGCTCTACTCCAAGGAGATCAGTAAGCGCATGCTCGACACCGTCAAGGCCCGACCCGTTAATGCTGATGAGAAGGAAGGATTAACATCGCCAGTTGTTGAAACTGCAACCTGAAGTTTCTAGCATTTTGGGTCTTAATGTTATTGAATTTGGGGTTTTGTTGTTGTTGCCCTGTTTGAGTTTCTCTTATCTGCTTAGTTCACTGTCCCCACATTGCTTACAACATATAATTATCTGTTCTTGAGTTCTATGACTTATGCAATGTTTCTGCGTTGAGATTTCTTCATTCATCAATGTGGCTTCAATTTTTTTATTAGTTTCTTTATATTGGTTGGAATTGAAGAGGTTTCTAGAAAGGGCGTCTCTTTTTTAA

Coding sequence (CDS)

ATGTCCGATCCACAGAACTCCATTCCGGCAGAGGCAGAATATGCAGAGCCCGAAATCAAAGAACCCATCAAACCATCGGCCGCCAAATTCAGCATATGGCCACCAACGCAGCGCACTCGCGACGCCGTCATCCATCGCCTGATCGAAACCCTGTCCGCCCCTTCCATTCTCTCCAAGCGTTACGGCACCATTCCGCCGGACCAGGCCGACGCCGTCGCAACGGACATTGAGAAGGACGCCTTCGCCACCGCCGACGCCTCTCCGCCCACCGGCGGCGACGGCATCGAGATTCTGCAGCTCTACTCCAAGGAGATCAGTAAGCGCATGCTCGACACCGTCAAGGCCCGACCCGTTAATGCTGATGAGAAGGAAGGATTAACATCGCCAGTTGTTGAAACTGCAACCTGA

Protein sequence

MSDPQNSIPAEAEYAEPEIKEPIKPSAAKFSIWPPTQRTRDAVIHRLIETLSAPSILSKRYGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKARPVNADEKEGLTSPVVETAT

Homology

[Close]

BLAST of Sed0018271 vs. NCBI nr
Match: XP_022961994.1 (MFP1 attachment factor 1-like [Cucurbita moschata])

HSP 1 Score: 167.2 bits (422), Expect = 1.0e-37
Identity = 93/140 (66.43%), Postives = 104/140 (74.29%), Query Frame = 0


Query: 1   MSDPQNSIPAEAEYAEPEIKEPIKPS---AAKFSIWPPTQRTRDAVIHRLIETLSAPSIL 60
           MSD  +S P + E  EPEIK+PIKP+   A KFSIWPPTQRTRDAV  RLIETLS PSIL
Sbjct: 1   MSDQDSSPPVQVESREPEIKDPIKPANPFATKFSIWPPTQRTRDAVTSRLIETLSTPSIL 60

Query: 61  SKRYGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKAR- 120
           SKRYGTIPP+ A  +A  IE +A+ATAD SP T  DGIEILQLYSKEISKRML+ VK R 
Sbjct: 61  SKRYGTIPPEAAATIARVIEDEAYATADGSPTTVDDGIEILQLYSKEISKRMLEAVKGRA 120

Query: 121 ----PVNADEKEGLTSPVVE 133
               P    EKEG +SPVV+
Sbjct: 121 IPAAPTENGEKEGSSSPVVD 140

[Close]

BLAST of Sed0018271 vs. NCBI nr
Match: KAG6598350.1 (MFP1 attachment factor 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166.8 bits (421), Expect = 1.3e-37
Identity = 93/140 (66.43%), Postives = 103/140 (73.57%), Query Frame = 0


Query: 1   MSDPQNSIPAEAEYAEPEIKEPIKPS---AAKFSIWPPTQRTRDAVIHRLIETLSAPSIL 60
           MSD  +S P + E  EPEIK+PIKP    A KFSIWPPTQRTRDAV  RLIETLS PSIL
Sbjct: 1   MSDQDSSPPVQVESREPEIKDPIKPGNPFATKFSIWPPTQRTRDAVTSRLIETLSTPSIL 60

Query: 61  SKRYGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKAR- 120
           SKRYGTIPP+ A  +A  IE +A+ATAD SP T  DGIEILQLYSKEISKRML+ VK R 
Sbjct: 61  SKRYGTIPPEAAATIARVIEDEAYATADGSPTTVDDGIEILQLYSKEISKRMLEAVKGRA 120

Query: 121 ----PVNADEKEGLTSPVVE 133
               P    EKEG +SPVV+
Sbjct: 121 IPAAPTENGEKEGSSSPVVD 140

[Close]

BLAST of Sed0018271 vs. NCBI nr
Match: XP_023545637.1 (MFP1 attachment factor 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 166.0 bits (419), Expect = 2.2e-37
Identity = 92/140 (65.71%), Postives = 104/140 (74.29%), Query Frame = 0


Query: 1   MSDPQNSIPAEAEYAEPEIKEPIKPS---AAKFSIWPPTQRTRDAVIHRLIETLSAPSIL 60
           MSD  +S P + E  EPEIK+PIKP+   A KFSIWPPTQRTRDAV  RLIETLS PSIL
Sbjct: 1   MSDQDSSPPVQLESREPEIKDPIKPANPFATKFSIWPPTQRTRDAVTSRLIETLSTPSIL 60

Query: 61  SKRYGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKAR- 120
           SKRYGTIPP+ A  +A  IE +A+ATAD SP T  DGIEILQ+YSKEISKRML+ VK R 
Sbjct: 61  SKRYGTIPPEAATTIARVIEDEAYATADGSPTTVDDGIEILQVYSKEISKRMLEAVKGRA 120

Query: 121 ----PVNADEKEGLTSPVVE 133
               P    EKEG +SPVV+
Sbjct: 121 IPAAPTENGEKEGSSSPVVD 140

[Close]

BLAST of Sed0018271 vs. NCBI nr
Match: XP_022997483.1 (MFP1 attachment factor 1-like [Cucurbita maxima])

HSP 1 Score: 160.6 bits (405), Expect = 9.4e-36
Identity = 90/140 (64.29%), Postives = 102/140 (72.86%), Query Frame = 0


Query: 1   MSDPQNSIPAEAEYAEPEIKEPIK---PSAAKFSIWPPTQRTRDAVIHRLIETLSAPSIL 60
           MSD  +S P + E  EPEIK+PIK   P A KFSIWPPTQRTRDAV  RLIETLS  SIL
Sbjct: 1   MSDQDSSPPVQVESREPEIKDPIKSANPFATKFSIWPPTQRTRDAVTSRLIETLSTTSIL 60

Query: 61  SKRYGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKAR- 120
           SKRYGTIPP+ A  +A  IE +A+ATAD SP T  DGIEILQ+YSK+ISKRML+ VK R 
Sbjct: 61  SKRYGTIPPEAAATIARVIEDEAYATADGSPTTVDDGIEILQVYSKQISKRMLEAVKGRA 120

Query: 121 ----PVNADEKEGLTSPVVE 133
               P    EKEG +SPVV+
Sbjct: 121 IPAAPTENGEKEGSSSPVVD 140

[Close]

BLAST of Sed0018271 vs. NCBI nr
Match: XP_038885619.1 (MFP1 attachment factor 1-like [Benincasa hispida])

HSP 1 Score: 159.8 bits (403), Expect = 1.6e-35
Identity = 88/140 (62.86%), Postives = 103/140 (73.57%), Query Frame = 0


Query: 1   MSDPQNSIPAEAEYAEPEIKEPIKPS---AAKFSIWPPTQRTRDAVIHRLIETLSAPSIL 60
           MSD  NS     ++ + EIK+P KP    A KFSIWPPTQRTRDAVI RLIETLS PSIL
Sbjct: 1   MSDQDNSPQTHLQFPDTEIKDPTKPPKPFATKFSIWPPTQRTRDAVISRLIETLSTPSIL 60

Query: 61  SKRYGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKAR- 120
           SKR+GT+PP++A AVA  IE +A+ATA+ SPPT  DGIEILQ+YSKEISKRML+ VK R 
Sbjct: 61  SKRFGTVPPEEAAAVARVIEDEAYATANGSPPTVDDGIEILQVYSKEISKRMLEAVKGRA 120

Query: 121 ----PVNADEKEGLTSPVVE 133
               P    E EG+ SPV+E
Sbjct: 121 IPAAPAENGEIEGVRSPVIE 140

[Close]

BLAST of Sed0018271 vs. ExPASy Swiss-Prot
Match: Q9M7N6 (MFP1 attachment factor 1 OS=Solanum lycopersicum OX=4081 GN=MAF1 PE=1 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.7e-30
Identity = 68/106 (64.15%), Postives = 80/106 (75.47%), Query Frame = 0


Query: 24  KPSAAKFSIWPPTQRTRDAVIHRLIETLSAPSILSKRYGTIPPDQADAVATDIEKDAFAT 83
           KP    FSIWPPTQRTRDAVI+RLIE+LS PSILSKRYGT+P D+A   A  IE++AFA 
Sbjct: 20  KPMTTSFSIWPPTQRTRDAVINRLIESLSTPSILSKRYGTLPQDEASETARLIEEEAFAA 79

Query: 84  ADASPPTGGDGIEILQLYSKEISKRMLDTVKARPVNADEKEGLTSP 130
           A ++     DGIEILQ+YSKEISKRM+DTVK+R   A   EG + P
Sbjct: 80  AGSTASDADDGIEILQVYSKEISKRMIDTVKSRSAPAAASEGESKP 125

[Close]

BLAST of Sed0018271 vs. ExPASy Swiss-Prot
Match: Q9C500 (WPP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=WPP2 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 8.6e-24
Identity = 62/117 (52.99%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 1   MSDPQNSIPAEAEY-AEPEIKEPIKPSAAKFSIWPPTQRTRDAVIHRLIETLSAPSILSK 60
           M+DP +   A  +     E +   KP      IWPPTQ+TRDAV++RLIETLS  SILSK
Sbjct: 28  MTDPTSQEAASKDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSK 87

Query: 61  RYGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKAR 117
           RYGT+  D A  VA  IE++A+  A  +  +  DGI+IL+LYSKEISKRML++VKAR
Sbjct: 88  RYGTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRMLESVKAR 144

[Close]

BLAST of Sed0018271 vs. ExPASy Swiss-Prot
Match: Q9FMH6 (WPP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=WPP1 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 4.7e-22
Identity = 61/116 (52.59%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 1   MSDPQNSIPAEAEYAEPEIKEPIKPSAAKFSIWPPTQRTRDAVIHRLIETLSAPSILSKR 60
           +S+ +NS        E   K P  P      IWPPTQ+TRDAVI+RLIETLS  SILSKR
Sbjct: 17  ISETENSTTLPTTETE---KNP-NPVTISLRIWPPTQKTRDAVINRLIETLSTESILSKR 76

Query: 61  YGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKAR 117
           +G++  ++A +VA  IE +A+A A A+     DGIEIL+ YSKEISKRML++VKA+
Sbjct: 77  FGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKRMLESVKAK 128

[Close]

BLAST of Sed0018271 vs. ExPASy Swiss-Prot
Match: Q0WQ91 (WPP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=WPP3 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.3e-15
Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 2   SDPQNSIPAEAEYAEPEIKEPIKPSAAKFSIWPPTQRTRDAVIHRLIETLSAPSILSKRY 61
           SD  + +      A  E+ +  K     FS+WPP Q++RD V++ +I+TLS  SILS +Y
Sbjct: 23  SDETSCLQKHRSDATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKTLSTDSILSYKY 82

Query: 62  GTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKAR 117
           GTI P++A AVA  IE+ A+    AS     DGI+ L++Y  E S+RM+++ + R
Sbjct: 83  GTIKPEEASAVAKSIEEKAYDI--ASRFVSSDGIKNLEVYGIETSERMIESAEVR 135

[Close]

BLAST of Sed0018271 vs. ExPASy Swiss-Prot
Match: Q9M651 (RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 SV=2)

HSP 1 Score: 69.3 bits (168), Expect = 3.7e-11
Identity = 38/97 (39.18%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 24  KPSAAKFSIWPPTQRTRDAVIHRLIETLSAPSILSKRYGTIPPDQADAVATDIEKDAFAT 83
           +P A    +WPP+  TR A+I R+    S+ +I +++YG++  DQA   A  IE  AF+T
Sbjct: 8   RPHAFSIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFST 67

Query: 84  ADA--SPPTGGDGIEILQLYSKEISKRMLDTVKARPV 119
           A+        GDG   +QLY+KE SK +L+ +K  PV
Sbjct: 68  ANQQFEREPDGDGGSAVQLYAKECSKLILEVLKKGPV 104

[Close]

BLAST of Sed0018271 vs. ExPASy TrEMBL
Match: A0A6J1HFL2 (MFP1 attachment factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111462597 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 4.9e-38
Identity = 93/140 (66.43%), Postives = 104/140 (74.29%), Query Frame = 0


Query: 1   MSDPQNSIPAEAEYAEPEIKEPIKPS---AAKFSIWPPTQRTRDAVIHRLIETLSAPSIL 60
           MSD  +S P + E  EPEIK+PIKP+   A KFSIWPPTQRTRDAV  RLIETLS PSIL
Sbjct: 1   MSDQDSSPPVQVESREPEIKDPIKPANPFATKFSIWPPTQRTRDAVTSRLIETLSTPSIL 60

Query: 61  SKRYGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKAR- 120
           SKRYGTIPP+ A  +A  IE +A+ATAD SP T  DGIEILQLYSKEISKRML+ VK R 
Sbjct: 61  SKRYGTIPPEAAATIARVIEDEAYATADGSPTTVDDGIEILQLYSKEISKRMLEAVKGRA 120

Query: 121 ----PVNADEKEGLTSPVVE 133
               P    EKEG +SPVV+
Sbjct: 121 IPAAPTENGEKEGSSSPVVD 140

[Close]

BLAST of Sed0018271 vs. ExPASy TrEMBL
Match: A0A6J1KE17 (MFP1 attachment factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492391 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 4.5e-36
Identity = 90/140 (64.29%), Postives = 102/140 (72.86%), Query Frame = 0


Query: 1   MSDPQNSIPAEAEYAEPEIKEPIK---PSAAKFSIWPPTQRTRDAVIHRLIETLSAPSIL 60
           MSD  +S P + E  EPEIK+PIK   P A KFSIWPPTQRTRDAV  RLIETLS  SIL
Sbjct: 1   MSDQDSSPPVQVESREPEIKDPIKSANPFATKFSIWPPTQRTRDAVTSRLIETLSTTSIL 60

Query: 61  SKRYGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKAR- 120
           SKRYGTIPP+ A  +A  IE +A+ATAD SP T  DGIEILQ+YSK+ISKRML+ VK R 
Sbjct: 61  SKRYGTIPPEAAATIARVIEDEAYATADGSPTTVDDGIEILQVYSKQISKRMLEAVKGRA 120

Query: 121 ----PVNADEKEGLTSPVVE 133
               P    EKEG +SPVV+
Sbjct: 121 IPAAPTENGEKEGSSSPVVD 140

[Close]

BLAST of Sed0018271 vs. ExPASy TrEMBL
Match: A0A0A0LNB9 (MFP1 attachment factor 1 OS=Cucumis sativus OX=3659 GN=Csa_2G355000 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 4.3e-34
Identity = 89/143 (62.24%), Postives = 106/143 (74.13%), Query Frame = 0


Query: 1   MSDPQNSIPAEAEYAEPEI--KEPIKPS---AAKFSIWPPTQRTRDAVIHRLIETLSAPS 60
           MSD +NS  +  ++ + +I  K+PIKP    A KFSIWPPTQRTRDAVI RLIETLS PS
Sbjct: 1   MSDQENSPQSHLQFPDSDIKHKDPIKPPMQFATKFSIWPPTQRTRDAVISRLIETLSTPS 60

Query: 61  ILSKRYGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKA 120
           ILSKR+GTIPPD+A  VA  IE++A+A A+ SPP+  DGIEILQ+YSKEISKRML+ VK 
Sbjct: 61  ILSKRFGTIPPDEAATVAQLIEEEAYAYANGSPPSVDDGIEILQVYSKEISKRMLEAVKG 120

Query: 121 RPVNA-----DEKEGLTSPVVET 134
           RP  A      E E + SPVVET
Sbjct: 121 RPSPAAPAENGETEEVRSPVVET 143

[Close]

BLAST of Sed0018271 vs. ExPASy TrEMBL
Match: A0A5A7V571 (MFP1 attachment factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00640 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.6e-33
Identity = 86/142 (60.56%), Postives = 106/142 (74.65%), Query Frame = 0


Query: 1   MSDPQNSIPAEAEYAEPEI--KEPIKPS---AAKFSIWPPTQRTRDAVIHRLIETLSAPS 60
           MSD +NS  +  ++ + +I  K+PIKP    A KFSIWPPTQRTRDAVI RLIETLS PS
Sbjct: 1   MSDQENSPQSHLQFPDSDIKDKDPIKPPMPFATKFSIWPPTQRTRDAVISRLIETLSTPS 60

Query: 61  ILSKRYGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKA 120
           ILSKR+G IPPD+A  VA  IE++A+A+A+ SPP+  DG+EILQ+YSKEISKRML+ VK 
Sbjct: 61  ILSKRFGIIPPDEAANVARIIEEEAYASANGSPPSVDDGVEILQVYSKEISKRMLEAVKG 120

Query: 121 RPVNA-----DEKEGLTSPVVE 133
           RP+ A      E E + SPVVE
Sbjct: 121 RPIPAAPAENGETEEVRSPVVE 142

[Close]

BLAST of Sed0018271 vs. ExPASy TrEMBL
Match: A0A1S3BBH7 (MFP1 attachment factor 1 OS=Cucumis melo OX=3656 GN=LOC103487862 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.6e-33
Identity = 86/142 (60.56%), Postives = 106/142 (74.65%), Query Frame = 0


Query: 1   MSDPQNSIPAEAEYAEPEI--KEPIKPS---AAKFSIWPPTQRTRDAVIHRLIETLSAPS 60
           MSD +NS  +  ++ + +I  K+PIKP    A KFSIWPPTQRTRDAVI RLIETLS PS
Sbjct: 1   MSDQENSPQSHLQFPDSDIKDKDPIKPPMPFATKFSIWPPTQRTRDAVISRLIETLSTPS 60

Query: 61  ILSKRYGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKA 120
           ILSKR+G IPPD+A  VA  IE++A+A+A+ SPP+  DG+EILQ+YSKEISKRML+ VK 
Sbjct: 61  ILSKRFGIIPPDEAANVARIIEEEAYASANGSPPSVDDGVEILQVYSKEISKRMLEAVKG 120

Query: 121 RPVNA-----DEKEGLTSPVVE 133
           RP+ A      E E + SPVVE
Sbjct: 121 RPIPAAPAENGETEEVRSPVVE 142

[Close]

BLAST of Sed0018271 vs. TAIR 10
Match: AT1G47200.1 (WPP domain protein 2 )

HSP 1 Score: 111.3 bits (277), Expect = 6.1e-25
Identity = 62/117 (52.99%), Postives = 79/117 (67.52%), Query Frame = 0


Query: 1   MSDPQNSIPAEAEY-AEPEIKEPIKPSAAKFSIWPPTQRTRDAVIHRLIETLSAPSILSK 60
           M+DP +   A  +     E +   KP      IWPPTQ+TRDAV++RLIETLS  SILSK
Sbjct: 28  MTDPTSQEAASKDTDLTKEAESEKKPGGISLRIWPPTQKTRDAVLNRLIETLSTESILSK 87

Query: 61  RYGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKAR 117
           RYGT+  D A  VA  IE++A+  A  +  +  DGI+IL+LYSKEISKRML++VKAR
Sbjct: 88  RYGTLKSDDATTVAKLIEEEAYGVASNAVSSDDDGIKILELYSKEISKRMLESVKAR 144

[Close]

BLAST of Sed0018271 vs. TAIR 10
Match: AT5G43070.1 (WPP domain protein 1 )

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-23
Identity = 61/116 (52.59%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 1   MSDPQNSIPAEAEYAEPEIKEPIKPSAAKFSIWPPTQRTRDAVIHRLIETLSAPSILSKR 60
           +S+ +NS        E   K P  P      IWPPTQ+TRDAVI+RLIETLS  SILSKR
Sbjct: 17  ISETENSTTLPTTETE---KNP-NPVTISLRIWPPTQKTRDAVINRLIETLSTESILSKR 76

Query: 61  YGTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKAR 117
           +G++  ++A +VA  IE +A+A A A+     DGIEIL+ YSKEISKRML++VKA+
Sbjct: 77  FGSLESEEASSVAKSIEDEAYAIASATVFGDDDGIEILKAYSKEISKRMLESVKAK 128

[Close]

BLAST of Sed0018271 vs. TAIR 10
Match: AT5G27940.1 (WPP domain protein 3 )

HSP 1 Score: 82.4 bits (202), Expect = 3.0e-16
Identity = 46/115 (40.00%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 2   SDPQNSIPAEAEYAEPEIKEPIKPSAAKFSIWPPTQRTRDAVIHRLIETLSAPSILSKRY 61
           SD  + +      A  E+ +  K     FS+WPP Q++RD V++ +I+TLS  SILS +Y
Sbjct: 23  SDETSCLQKHRSDATSEVTKEEKSGGILFSVWPPCQKSRDYVVNSMIKTLSTDSILSYKY 82

Query: 62  GTIPPDQADAVATDIEKDAFATADASPPTGGDGIEILQLYSKEISKRMLDTVKAR 117
           GTI P++A AVA  IE+ A+    AS     DGI+ L++Y  E S+RM+++ + R
Sbjct: 83  GTIKPEEASAVAKSIEEKAYDI--ASRFVSSDGIKNLEVYGIETSERMIESAEVR 135

[Close]

BLAST of Sed0018271 vs. TAIR 10
Match: AT5G19320.1 (RAN GTPase activating protein 2 )

HSP 1 Score: 69.3 bits (168), Expect = 2.7e-12
Identity = 38/97 (39.18%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 24  KPSAAKFSIWPPTQRTRDAVIHRLIETLSAPSILSKRYGTIPPDQADAVATDIEKDAFAT 83
           +P A    +WPP+  TR A+I R+    S+ +I +++YG++  DQA   A  IE  AF+T
Sbjct: 8   RPHAFSIKLWPPSLPTRKALIERITNNFSSKTIFTEKYGSLTKDQATENAKRIEDIAFST 67

Query: 84  ADA--SPPTGGDGIEILQLYSKEISKRMLDTVKARPV 119
           A+        GDG   +QLY+KE SK +L+ +K  PV
Sbjct: 68  ANQQFEREPDGDGGSAVQLYAKECSKLILEVLKKGPV 104

[Close]

BLAST of Sed0018271 vs. TAIR 10
Match: AT3G63130.1 (RAN GTPase activating protein 1 )

HSP 1 Score: 68.2 bits (165), Expect = 5.9e-12
Identity = 36/95 (37.89%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 32  IWPPTQRTRDAVIHRLIETLSAPSILSKRYGTIPPDQADAVATDIEKDAFATADA--SPP 91
           +WPP++ TR  ++ R+ + ++ PSI S++YG +  ++A+  A  IE  AFATA+      
Sbjct: 17  MWPPSKSTRLMLVERMTKNITTPSIFSRKYGLLSVEEAEQDAKRIEDLAFATANKHFQNE 76

Query: 92  TGGDGIEILQLYSKEISKRMLDTVKARPVNADEKE 125
             GDG   + +Y+KE SK MLD +K  P    E E
Sbjct: 77  PDGDGTSAVHVYAKESSKLMLDVIKRGPQEESEVE 111

The following BLAST results are available for this feature:

BLAST of Sed0018271 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961994.1	1.0e-37	66.43	MFP1 attachment factor 1-like [Cucurbita moschata]	[more]
KAG6598350.1	1.3e-37	66.43	MFP1 attachment factor 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023545637.1	2.2e-37	65.71	MFP1 attachment factor 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022997483.1	9.4e-36	64.29	MFP1 attachment factor 1-like [Cucurbita maxima]	[more]
XP_038885619.1	1.6e-35	62.86	MFP1 attachment factor 1-like [Benincasa hispida]	[more]

BLAST of Sed0018271 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M7N6	2.7e-30	64.15	MFP1 attachment factor 1 OS=Solanum lycopersicum OX=4081 GN=MAF1 PE=1 SV=1	[more]
Q9C500	8.6e-24	52.99	WPP domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=WPP2 PE=1 SV=...	[more]
Q9FMH6	4.7e-22	52.59	WPP domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=WPP1 PE=1 SV=...	[more]
Q0WQ91	4.3e-15	40.00	WPP domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=WPP3 PE=2 SV=...	[more]
Q9M651	3.7e-11	39.18	RAN GTPase-activating protein 2 OS=Arabidopsis thaliana OX=3702 GN=RANGAP2 PE=1 ...	[more]

BLAST of Sed0018271 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFL2	4.9e-38	66.43	MFP1 attachment factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111462597 PE=4...	[more]
A0A6J1KE17	4.5e-36	64.29	MFP1 attachment factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492391 PE=4 S...	[more]
A0A0A0LNB9	4.3e-34	62.24	MFP1 attachment factor 1 OS=Cucumis sativus OX=3659 GN=Csa_2G355000 PE=4 SV=1	[more]
A0A5A7V571	1.6e-33	60.56	MFP1 attachment factor 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A1S3BBH7	1.6e-33	60.56	MFP1 attachment factor 1 OS=Cucumis melo OX=3656 GN=LOC103487862 PE=4 SV=1	[more]

BLAST of Sed0018271 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47200.1	6.1e-25	52.99	WPP domain protein 2	[more]
AT5G43070.1	3.3e-23	52.59	WPP domain protein 1	[more]
AT5G27940.1	3.0e-16	40.00	WPP domain protein 3	[more]
AT5G19320.1	2.7e-12	39.18	RAN GTPase activating protein 2	[more]
AT3G63130.1	5.9e-12	37.89	RAN GTPase activating protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025265	WPP domain	PFAM	PF13943	WPP	coord: 30..122 e-value: 5.2E-36 score: 123.0
IPR038214	WPP domain superfamily	GENE3D	1.10.246.200	WPP domain	coord: 29..124 e-value: 4.6E-38 score: 131.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR34362:SF1	WPP DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 10..125
IPR044692	WPP domain-containing protein 1/2/3	PANTHER	PTHR34362	WPP DOMAIN-CONTAINING PROTEIN 1-RELATED	coord: 10..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0018271.1	Sed0018271.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048527	lateral root development
biological_process	GO:0000278	mitotic cell cycle