Sed0018111 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGATTTCACCTGCAACAGTAACAAGCGAGTTCGCGACGAGTCCGACGAGTCGCTCGCCGATTCGGCCGAGTCGAAGCTGAGACGACTCGACTCAACGGAATTGGTATCTCCGAAGACATGCACGGAGGTTTTTGCGGAGTCGGAGGAGTTGCTGAACATCCTTGAAGATTCCGACGCCGTACGCGACGGACTGGAACTCGATTCGTTCATCCGAAGCTTCGAGGAGGAGATTCAAGCCCTAGCGCCGCCGAAAGCGGCGGTGGATCGGAACGAGAGTCCTCAGGCGGAGCTCGGATATCTCTTGGAGGCGTCGGACGATGAACTCGGGCTTCCGACGACGGTTGGCCCGAGCGCCGACGGGGAGATCGAGGTGGCTGATTTTACGATCCCGGCTTGTTGTTCGCCTGGTTTGTTGGAGTTGGATGGGAACTTAGGGTTTGAGGATGAGATACCGTGTTATGATTCGTTCGAGATCGGAACCGGCATTGGTTCCGGCGCGGCGGAGGGCGGCGAGTTTGCATTGGGCGGTTTGTTTGATTATTCCGACGTGCCGTTTCGACCGGAGGCGTTATCGGCTCAATAGAGACGGTTTTGAATGGGGGTTGTGGATTTTTTTCGTGTTTAGGGTTTGTTTGGACCCGACGTCGTTTTGAGTCTTTAGGTTGTAAATCTGAAAGGACAAACACAGATCTTAGAATAGAAATGCAAAATAAAAAAACGGGAAAAAATAATTGTACAGGTTTTTTTTTTCAGCGCGTTTTTTATCCGCCTTCGTCGTCTATCTTTTTTAATAAATTGGGTAGAAAATGATTTTTTTTTCAATTCGACAAATTTTGAATTTACATTTTTAAACGACTGGTGGAACTATTTTAATGGTGCGGTTGTGAAACTTCGATGAGTCATTGAAGCAATTGAATTGTGTATGGAATAAAAGTATGGTTTTTTATATTAAAAAAGAGAAAAAGTCTAGGTAAGACGATATGATTTCAAATTTTTTAATCTCTTAGAAAAATACATAAATATGAATGGTTAAAATTAAAATAATGGTTGGTGGTGATTTTACACTAAAATAGTGTGAACATTAGCCATGAGTATTTTACATGACAGAATTGGATTAAATAGTAGAAGATTCTTGATTATAGAGTATGCTCAATCAACATAGTATTATTAACTTATATGAACAAGGTTAGATGTTTTATCTAGATCACATATTTATACAACCCACCATGTAATAGGTGGAGCAACAGATTTTAATCCTGATTCTTCAAATCGAGAAGATATTTATATATAGACATCGATGTATGACAAGTGATTCAATCTAAACTTCTATGCTCGATCTCGAGACTATATGCCTGCTTCTCTGTTCTCTTAACAACCAGATTTCTACCCAAAGAATTATATAATATCATTATGTCGATTTTTTAAGCCTTGAAGTTGCAAGTTATTAGAGAACATGTAATTCAAAATTGTGATCAAAAGTACCTCGTAGATAACTTAAGATTCTTTATACAACTTATAAATAAATTTTGGTCAATTTATGTATGAATTTATACACTTTATTGACGTGGAAAATGGGATGTGAATGTATTTCATACCATATCAAGTAGTTCTTGAATGTACTAGTTTTGAAATATTAAGGGTAAATTTTGGACTATGTCCATCTTTTCATGTTTAATATGCAATCCAATTTAAATCAATTTCTTTATCCGACTAATAATTTAATACACATTGTTAACAAACCTGATGATAAGGATGACAACCCTACTCTTCGAATTTCCATATTGATATAATATTGTCCATTATGGGATTAGACTCTCATAACTTTATTTTTTGACATCTCTCAACAGGCTTCATCTTAAAAGATGGTTGCCATCACTTATATACCCATAATCTTTCCTCATTTAATTAATGTGGGATACTTTATTTGCATCCAAACACCTGAGACAATGGCTCCAAGCTTGCCTCAGTAAGCCTAATTTTTTATCATGCAATTTTGTACTTTCGTTATTTATATTGCCTAATATTTTGTGTGTATAACTATAATGTAAATACATAGTTTTTTTTTTTTTGAGGAAATAGTTTATAGTTTATCGTTTACTCAATATTTTCAAATTAATTACTTCAAAAAAAAATCAAATGAATAA ATGGAGGATTTCACCTGCAACAGTAACAAGCGAGTTCGCGACGAGTCCGACGAGTCGCTCGCCGATTCGGCCGAGTCGAAGCTGAGACGACTCGACTCAACGGAATTGGTATCTCCGAAGACATGCACGGAGGTTTTTGCGGAGTCGGAGGAGTTGCTGAACATCCTTGAAGATTCCGACGCCGTACGCGACGGACTGGAACTCGATTCGTTCATCCGAAGCTTCGAGGAGGAGATTCAAGCCCTAGCGCCGCCGAAAGCGGCGGTGGATCGGAACGAGAGTCCTCAGGCGGAGCTCGGATATCTCTTGGAGGCGTCGGACGATGAACTCGGGCTTCCGACGACGGTTGGCCCGAGCGCCGACGGGGAGATCGAGGTGGCTGATTTTACGATCCCGGCTTGTTGTTCGCCTGGTTTGTTGGAGTTGGATGGGAACTTAGGGTTTGAGGATGAGATACCGTGTTATGATTCGTTCGAGATCGGAACCGGCATTGGTTCCGGCGCGGCGGAGGGCGGCGAGTTTGCATTGGGCGGTTTTTTTTTTTTTTTTGAGGAAATAGTTTATAGTTTATCGTTTACTCAATATTTTCAAATTAATTACTTCAAAAAAAAATCAAATGAATAA ATGGAGGATTTCACCTGCAACAGTAACAAGCGAGTTCGCGACGAGTCCGACGAGTCGCTCGCCGATTCGGCCGAGTCGAAGCTGAGACGACTCGACTCAACGGAATTGGTATCTCCGAAGACATGCACGGAGGTTTTTGCGGAGTCGGAGGAGTTGCTGAACATCCTTGAAGATTCCGACGCCGTACGCGACGGACTGGAACTCGATTCGTTCATCCGAAGCTTCGAGGAGGAGATTCAAGCCCTAGCGCCGCCGAAAGCGGCGGTGGATCGGAACGAGAGTCCTCAGGCGGAGCTCGGATATCTCTTGGAGGCGTCGGACGATGAACTCGGGCTTCCGACGACGGTTGGCCCGAGCGCCGACGGGGAGATCGAGGTGGCTGATTTTACGATCCCGGCTTGTTGTTCGCCTGGTTTGTTGGAGTTGGATGGGAACTTAGGGTTTGAGGATGAGATACCGTGTTATGATTCGTTCGAGATCGGAACCGGCATTGGTTCCGGCGCGGCGGAGGGCGGCGAGTTTGCATTGGGCGGTTTTTTTTTTTTTTTTGAGGAAATAGTTTATAGTTTATCGTTTACTCAATATTTTCAAATTAATTACTTCAAAAAAAAATCAAATGAATAA MEDFTCNSNKRVRDESDESLADSAESKLRRLDSTELVSPKTCTEVFAESEELLNILEDSDAVRDGLELDSFIRSFEEEIQALAPPKAAVDRNESPQAELGYLLEASDDELGLPTTVGPSADGEIEVADFTIPACCSPGLLELDGNLGFEDEIPCYDSFEIGTGIGSGAAEGGEFALGGFFFFFEEIVYSLSFTQYFQINYFKKKSNE Homology
BLAST of Sed0018111 vs. NCBI nr
Match: XP_023541956.1 (uncharacterized protein LOC111801944 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 207.6 bits (527), Expect = 1.0e-49 Identity = 130/208 (62.50%), Postives = 144/208 (69.23%), Query Frame = 0
BLAST of Sed0018111 vs. NCBI nr
Match: XP_022954576.1 (uncharacterized protein LOC111456805 [Cucurbita moschata]) HSP 1 Score: 204.1 bits (518), Expect = 1.1e-48 Identity = 128/208 (61.54%), Postives = 145/208 (69.71%), Query Frame = 0
BLAST of Sed0018111 vs. NCBI nr
Match: XP_022994085.1 (uncharacterized protein LOC111489916 [Cucurbita maxima]) HSP 1 Score: 202.2 bits (513), Expect = 4.3e-48 Identity = 127/208 (61.06%), Postives = 144/208 (69.23%), Query Frame = 0
BLAST of Sed0018111 vs. NCBI nr
Match: KAG6572935.1 (hypothetical protein SDJN03_26822, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 199.5 bits (506), Expect = 2.8e-47 Identity = 126/208 (60.58%), Postives = 143/208 (68.75%), Query Frame = 0
BLAST of Sed0018111 vs. NCBI nr
Match: XP_038894861.1 (uncharacterized protein LOC120083261 [Benincasa hispida]) HSP 1 Score: 188.3 bits (477), Expect = 6.4e-44 Identity = 121/200 (60.50%), Postives = 142/200 (71.00%), Query Frame = 0
BLAST of Sed0018111 vs. ExPASy TrEMBL
Match: A0A6J1GR95 (uncharacterized protein LOC111456805 OS=Cucurbita moschata OX=3662 GN=LOC111456805 PE=4 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 5.5e-49 Identity = 128/208 (61.54%), Postives = 145/208 (69.71%), Query Frame = 0
BLAST of Sed0018111 vs. ExPASy TrEMBL
Match: A0A6J1K097 (uncharacterized protein LOC111489916 OS=Cucurbita maxima OX=3661 GN=LOC111489916 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 2.1e-48 Identity = 127/208 (61.06%), Postives = 144/208 (69.23%), Query Frame = 0
BLAST of Sed0018111 vs. ExPASy TrEMBL
Match: A0A6J1E811 (uncharacterized protein LOC111431577 OS=Cucurbita moschata OX=3662 GN=LOC111431577 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 8.5e-42 Identity = 120/213 (56.34%), Postives = 134/213 (62.91%), Query Frame = 0
BLAST of Sed0018111 vs. ExPASy TrEMBL
Match: A0A0A0LQD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042270 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 1.7e-37 Identity = 119/227 (52.42%), Postives = 141/227 (62.11%), Query Frame = 0
BLAST of Sed0018111 vs. ExPASy TrEMBL
Match: A0A6J5XCW8 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34317 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 1.3e-21 Identity = 98/214 (45.79%), Postives = 121/214 (56.54%), Query Frame = 0
BLAST of Sed0018111 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 79.3 bits (194), Expect = 3.9e-15 Identity = 67/190 (35.26%), Postives = 90/190 (47.37%), Query Frame = 0
BLAST of Sed0018111 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.5 bits (184), Expect = 5.7e-14 Identity = 63/182 (34.62%), Postives = 86/182 (47.25%), Query Frame = 0
BLAST of Sed0018111 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 75.1 bits (183), Expect = 7.4e-14 Identity = 63/179 (35.20%), Postives = 84/179 (46.93%), Query Frame = 0
BLAST of Sed0018111 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 9.7e-06 Identity = 47/154 (30.52%), Postives = 71/154 (46.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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