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Sed0018040 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGTTCTCCACGCTTCCGCCTCCCTTTCTCTCTCCATACGCGGTACTCTCTTTCTCACACTTCCTCGATTTCGCTCTTCCGTTCTGTGATTGTTGAGTTTGCAATCGATTCATGAACACGAGCGATAACAATGTTGCAGATGCTTCTTTCGTTAGATCGGTGCCAAAATCCTTTCCGCTTCACAGAGGTTCCCTGCCGAATTTGCAAAACGGATCGGCGTTTGCTTCTGGCTCTCCGCTTGGTACGTATATTCTTATTCTTTCTGTTCTATGTCTAATCCGTATGTTTCTGCTTGATTTGTTGATGATTTCTATCGATTACTAGGGTTTTTAAGTTCGTTTGATTTGTTTTTTTTAGAAAACTAAATCGTTTTCTGTGAAAATTCAAAGATACTAGAGGATGAGTGTAGGTTAAGCTTGTAAACTGAAAAAAAGATACTAGAGTATGTTTGAAAACTGAAAAAAAATGATGCTCGTGTGCCGAAATACGATTCTTCGGATATGGCCGTAGGACTGAGAAAAGCTGAAGTCATGTCGGATGAAAGGACGGGACACAAGTTGTAGAGTAGATAAATCCCGGTAATTAGAGGCAAAAACTTGACAGTTACCCTTATTCTTGGGAAAGATAGCCATGGAAGATGATTGCGGAGCAAAACGGAGGAGCTAGTGAAGATAGGTCACAGTTAAGAAAGAAATATGGCACAGCACAGCACAAGTTCCAGTCTAAGTGATCTAATGCATTTTCCATTCTAATATAAAGAGTTGATTAATGTTAGATTTAAGTGCATTATTAGAGCCCGAGGAAAGACCAAATTGTAAATTACCCTTAGAACTTTTCTTTTGTTTCAAAGTTACTTTTCTTCATTAAATTGCAATATTATCTCTTTTCATAAATGTTTCAAAACAATTCTTATAGTAAAAAATCATTAAAATGTTGAGCAAGTGGCCTAGTGGTCAAGATGGGCTTGGGGTCCTTAAGACGATGGTTTCAATCCATGGTAGCCACCTACTTAAGAATTAATTTCCTACGAATTTTCTTGACATTCAAATGTTGTAGGGTCTGGCGGTATGTCCCGTGACATTATTCAAAGTGCATGCAAACTAGTTCCATGGATATAAATAAAAAGGCCAATTTAAGCAAAATATTCAACTAGATTTTATTATCAGCTAATAGTTACTAATGTTCCCAGTGCTAAGCAAGCCAACTGGTCAAATGATGAAACCAAATGCCGTGTCTATAAGATGTGAGCAAAGCACCCAGGGGAGTAACAATCTGGATGTTTGGCTCGGGCGGCTTGCGATGGTAGGATTTGCAATTGCTATTAGTGTCGAAATAGCGACAGGCAAGGGACTTTTGGAGGTACGGCCTTTGTAATCTCAGAAAATGGTTCATTGTTACTTATATTGCTGAAAGCTGATAGACATTGTTTTAAGCTTTTCTTTGCCTTTTGGAATCTGTAATTTAGCCTGTCTAATTATAAACACTAATTTTTGTCCCCGAGGGGTGACGTAGTGGTTGAAGACTTGGGCTTTGAGGGTATGCTCCCCTCAAAGTCTTAAGTTCAAGTCTTCCCTGTGACATTACTCCTTCGATGTTTCTAGTACTTGGCCTAGGGACGGGCATGATTACCTTATTTCAAATTATAAACACTAATTGTTAACAAAATATTAGCTCATTGTGTTCGTTACAAGATTTCAGGTTTTATATTTTCTGTTTAGAAAATTGTCTTTTCCCTAATTAATTATACGAATGTATCCTTTTGTACCACTCGGAGTATTCCATTTGAACTGTTGAATTGATCTAAAGATGGCTCTCAAAATGTATCTAGAATGTATTCTATTGCTTTTTTTAGTCTCTTCCATTTTTGTTTCCAAACACTTGCTCACTGATCTTGGCTTGATATAAAAGTGGCCATTGAATTATTCTTGGTTGATTGCTTCTGATTGATTTTGGTCTGTTATAAAAGTGAACGTCTAATTATTCTAGGCTGATCTTTGGATGTGCCTGATTCTTTACTTTTGTGGTTGCTCTTCACATTTGTTTACTTTATCCATTAGAGGAAATCCAGAGCTTAAACTTATCCCTTGTTTCCCTATAGTGTCTTGTATGAAAAATTTCATAAGAAATACATCATGGAATTAACAGAAACCTTACTGGAAACATTGTTTTCATGATGCAGAATTTTGGAGTAACGGCTCCCCTGCCTAGTGTGGCCTTGGGAGTTACCGCATTGGTTGGCATATTGACCGCAGTTTTCATCTTCCAATCAGCTTCCAAAAACTGA ATGGCCGTTCTCCACGCTTCCGCCTCCCTTTCTCTCTCCATACGCGATGCTTCTTTCGTTAGATCGGTGCCAAAATCCTTTCCGCTTCACAGAGGTTCCCTGCCGAATTTGCAAAACGGATCGGCGTTTGCTTCTGGCTCTCCGCTTGTGCTAAGCAAGCCAACTGGTCAAATGATGAAACCAAATGCCGTGTCTATAAGATGTGAGCAAAGCACCCAGGGGAGTAACAATCTGGATGTTTGGCTCGGGCGGCTTGCGATGGTAGGATTTGCAATTGCTATTAGTGTCGAAATAGCGACAGGCAAGGGACTTTTGGAGAATTTTGGAGTAACGGCTCCCCTGCCTAGTGTGGCCTTGGGAGTTACCGCATTGGTTGGCATATTGACCGCAGTTTTCATCTTCCAATCAGCTTCCAAAAACTGA ATGGCCGTTCTCCACGCTTCCGCCTCCCTTTCTCTCTCCATACGCGATGCTTCTTTCGTTAGATCGGTGCCAAAATCCTTTCCGCTTCACAGAGGTTCCCTGCCGAATTTGCAAAACGGATCGGCGTTTGCTTCTGGCTCTCCGCTTGTGCTAAGCAAGCCAACTGGTCAAATGATGAAACCAAATGCCGTGTCTATAAGATGTGAGCAAAGCACCCAGGGGAGTAACAATCTGGATGTTTGGCTCGGGCGGCTTGCGATGGTAGGATTTGCAATTGCTATTAGTGTCGAAATAGCGACAGGCAAGGGACTTTTGGAGAATTTTGGAGTAACGGCTCCCCTGCCTAGTGTGGCCTTGGGAGTTACCGCATTGGTTGGCATATTGACCGCAGTTTTCATCTTCCAATCAGCTTCCAAAAACTGA MAVLHASASLSLSIRDASFVRSVPKSFPLHRGSLPNLQNGSAFASGSPLVLSKPTGQMMKPNAVSIRCEQSTQGSNNLDVWLGRLAMVGFAIAISVEIATGKGLLENFGVTAPLPSVALGVTALVGILTAVFIFQSASKN Homology
BLAST of Sed0018040 vs. NCBI nr
Match: XP_022988996.1 (stress enhanced protein 1, chloroplastic [Cucurbita maxima] >XP_022988997.1 stress enhanced protein 1, chloroplastic [Cucurbita maxima] >XP_022988998.1 stress enhanced protein 1, chloroplastic [Cucurbita maxima]) HSP 1 Score: 224.6 bits (571), Expect = 5.5e-55 Identity = 123/144 (85.42%), Postives = 129/144 (89.58%), Query Frame = 0
BLAST of Sed0018040 vs. NCBI nr
Match: XP_022927651.1 (stress enhanced protein 1, chloroplastic [Cucurbita moschata] >XP_022927652.1 stress enhanced protein 1, chloroplastic [Cucurbita moschata]) HSP 1 Score: 223.0 bits (567), Expect = 1.6e-54 Identity = 122/144 (84.72%), Postives = 129/144 (89.58%), Query Frame = 0
BLAST of Sed0018040 vs. NCBI nr
Match: XP_023529447.1 (stress enhanced protein 1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023529449.1 stress enhanced protein 1, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023529450.1 stress enhanced protein 1, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 221.9 bits (564), Expect = 3.6e-54 Identity = 121/144 (84.03%), Postives = 129/144 (89.58%), Query Frame = 0
BLAST of Sed0018040 vs. NCBI nr
Match: KAG7022474.1 (Stress enhanced protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 221.9 bits (564), Expect = 3.6e-54 Identity = 121/144 (84.03%), Postives = 129/144 (89.58%), Query Frame = 0
BLAST of Sed0018040 vs. NCBI nr
Match: XP_022148743.1 (ADP-ribosylation factor 2 [Momordica charantia]) HSP 1 Score: 221.9 bits (564), Expect = 3.6e-54 Identity = 122/143 (85.31%), Postives = 128/143 (89.51%), Query Frame = 0
BLAST of Sed0018040 vs. ExPASy Swiss-Prot
Match: Q9M7I9 (Stress enhanced protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SEP1 PE=2 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 2.8e-30 Identity = 82/146 (56.16%), Postives = 104/146 (71.23%), Query Frame = 0
BLAST of Sed0018040 vs. ExPASy TrEMBL
Match: A0A6J1JIS2 (stress enhanced protein 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486191 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.7e-55 Identity = 123/144 (85.42%), Postives = 129/144 (89.58%), Query Frame = 0
BLAST of Sed0018040 vs. ExPASy TrEMBL
Match: A0A6J1EI92 (stress enhanced protein 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111434475 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 7.7e-55 Identity = 122/144 (84.72%), Postives = 129/144 (89.58%), Query Frame = 0
BLAST of Sed0018040 vs. ExPASy TrEMBL
Match: A0A6J1D4Y5 (ADP-ribosylation factor 2 OS=Momordica charantia OX=3673 GN=LOC111017336 PE=4 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.7e-54 Identity = 122/143 (85.31%), Postives = 128/143 (89.51%), Query Frame = 0
BLAST of Sed0018040 vs. ExPASy TrEMBL
Match: A0A6J1IBF1 (stress enhanced protein 1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470966 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 4.4e-50 Identity = 116/145 (80.00%), Postives = 125/145 (86.21%), Query Frame = 0
BLAST of Sed0018040 vs. ExPASy TrEMBL
Match: A0A0A0K2J5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G072820 PE=4 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 9.8e-50 Identity = 114/144 (79.17%), Postives = 126/144 (87.50%), Query Frame = 0
BLAST of Sed0018040 vs. TAIR 10
Match: AT4G34190.1 (stress enhanced protein 1 ) HSP 1 Score: 132.9 bits (333), Expect = 2.0e-31 Identity = 82/146 (56.16%), Postives = 104/146 (71.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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