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Sed0017790 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAACAAAAACAGCCATGTCACCATGGAAGTGTTTTGGCCTGAATCTCAATCTAAGTCATGGATTGCTAAACGATGTGGGGATCATATGTGTTCGTGGTCGGCGAAAGATGATGGAATTTATATTTTCAATGCTCATGAAAATAGGTCTGATCTTCATACTAAATGGCTCCCTGGCTGGTAA ATGAGCAACAAAAACAGCCATGTCACCATGGAAGTGTTTTGGCCTGAATCTCAATCTAAGTCATGGATTGCTAAACGATGTGGGGATCATATGTGTTCGTGGTCGGCGAAAGATGATGGAATTTATATTTTCAATGCTCATGAAAATAGGTCTGATCTTCATACTAAATGGCTCCCTGGCTGGTAA ATGAGCAACAAAAACAGCCATGTCACCATGGAAGTGTTTTGGCCTGAATCTCAATCTAAGTCATGGATTGCTAAACGATGTGGGGATCATATGTGTTCGTGGTCGGCGAAAGATGATGGAATTTATATTTTCAATGCTCATGAAAATAGGTCTGATCTTCATACTAAATGGCTCCCTGGCTGGTAA MSNKNSHVTMEVFWPESQSKSWIAKRCGDHMCSWSAKDDGIYIFNAHENRSDLHTKWLPGW Homology
BLAST of Sed0017790 vs. NCBI nr
Match: KAE8650840.1 (hypothetical protein Csa_017632 [Cucumis sativus]) HSP 1 Score: 91.7 bits (226), Expect = 2.4e-15 Identity = 35/61 (57.38%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of Sed0017790 vs. NCBI nr
Match: XP_007201112.2 (uncharacterized protein LOC18768730 [Prunus persica] >ONH93017.1 hypothetical protein PRUPE_8G208400 [Prunus persica]) HSP 1 Score: 70.1 bits (170), Expect = 7.5e-09 Identity = 30/60 (50.00%), Postives = 36/60 (60.00%), Query Frame = 0
BLAST of Sed0017790 vs. NCBI nr
Match: XP_034229620.1 (S-protein homolog 1-like [Prunus dulcis] >VVA15896.1 PREDICTED: S- [Prunus dulcis]) HSP 1 Score: 70.1 bits (170), Expect = 7.5e-09 Identity = 30/60 (50.00%), Postives = 36/60 (60.00%), Query Frame = 0
BLAST of Sed0017790 vs. NCBI nr
Match: CAB4291342.1 (unnamed protein product [Prunus armeniaca] >CAB4321660.1 unnamed protein product [Prunus armeniaca]) HSP 1 Score: 69.3 bits (168), Expect = 1.3e-08 Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of Sed0017790 vs. NCBI nr
Match: XP_015892179.1 (S-protein homolog 1-like [Ziziphus jujuba]) HSP 1 Score: 68.6 bits (166), Expect = 2.2e-08 Identity = 27/57 (47.37%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of Sed0017790 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 2.8e-06 Identity = 22/61 (36.07%), Postives = 32/61 (52.46%), Query Frame = 0
BLAST of Sed0017790 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 1.8e-05 Identity = 21/61 (34.43%), Postives = 33/61 (54.10%), Query Frame = 0
BLAST of Sed0017790 vs. ExPASy TrEMBL
Match: A0A0A0L8P9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G623980 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 3.1e-16 Identity = 36/60 (60.00%), Postives = 51/60 (85.00%), Query Frame = 0
BLAST of Sed0017790 vs. ExPASy TrEMBL
Match: A0A5E4EKH7 (S-protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B010815 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.6e-09 Identity = 30/60 (50.00%), Postives = 36/60 (60.00%), Query Frame = 0
BLAST of Sed0017790 vs. ExPASy TrEMBL
Match: M5VN50 (S-protein homolog OS=Prunus persica OX=3760 GN=PRUPE_ppa024219mg PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.6e-09 Identity = 30/60 (50.00%), Postives = 36/60 (60.00%), Query Frame = 0
BLAST of Sed0017790 vs. ExPASy TrEMBL
Match: A0A251N105 (S-protein homolog OS=Prunus persica OX=3760 GN=PRUPE_8G208400 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 3.6e-09 Identity = 30/60 (50.00%), Postives = 36/60 (60.00%), Query Frame = 0
BLAST of Sed0017790 vs. ExPASy TrEMBL
Match: A0A6J5VTZ1 (S-protein homolog OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51617 PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 6.2e-09 Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of Sed0017790 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 52.0 bits (123), Expect = 2.0e-07 Identity = 22/61 (36.07%), Postives = 32/61 (52.46%), Query Frame = 0
BLAST of Sed0017790 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 49.3 bits (116), Expect = 1.3e-06 Identity = 21/61 (34.43%), Postives = 33/61 (54.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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