Homology
BLAST of Sed0017630 vs. NCBI nr
Match:
XP_022938070.1 (60S ribosomal export protein NMD3-like [Cucurbita moschata])
HSP 1 Score: 858.6 bits (2217), Expect = 2.7e-245
Identity = 417/497 (83.90%), Postives = 453/497 (91.15%), Query Frame = 0
Query: 3 REPMDCVLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTW 62
++ + VLCCKCGI M PNAANMC+ CL SEVDITEGLQKQLTIMHCP+C YLQPPRTW
Sbjct: 11 QQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTW 70
Query: 63 LKAQLESKELLTFCIKRLKNLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQS 122
+KAQLESK+LLTFCIKRLKNLNKV+L+HAEFVWTEPHSKRIKVKLKV+KEVL GALLEQS
Sbjct: 71 IKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGALLEQS 130
Query: 123 YVAEYLVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRI 182
YV EY+V DHLC+SCSRV ANPDQWVA VQLRQHVPHRRTFFFLEQLILKH AAANAIRI
Sbjct: 131 YVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAIRI 190
Query: 183 KQMDQGIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISP 242
KQMDQGID FFSNR HGVKFVEFIGKV PIR R DKQLVSHD+KSN HNYK+TFSVE+SP
Sbjct: 191 KQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVELSP 250
Query: 243 ICREDLICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLL 302
ICREDLICLPPKVAVSLGN GP+VIC+KVTN++ALLDPLTLRHC LDA++YWRTSF+ LL
Sbjct: 251 ICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLL 310
Query: 303 TSRQLVEYIVLDIENISTEVNIGGSKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 362
TSRQLVEYIVLDIEN+STEVN+ GSKYILADAQ+ RVSD GRN TI +IRTHLGHILNPG
Sbjct: 311 TSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIRTHLGHILNPG 370
Query: 363 DYALGYDLYGANSNDMELDQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLD 422
DYALGYDLY ANSNDMEL++Y+GLQ+PE ILIKKSYEEKRQRKR KPRSWKLKSLEMD+D
Sbjct: 371 DYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMDVD 430
Query: 423 DKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSEMIDGEDGTSVALDEL 482
DKD R EQDK LEYEQFLRDLEENPD+R NISLYRN+EYQPSEM DGEDG SV L+EL
Sbjct: 431 DKDQGRAEQDKMHLEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLEEL 490
Query: 483 LVDLDINRDDGDNGMHE 500
L DLD++ DGDNGMHE
Sbjct: 491 LADLDLSEGDGDNGMHE 507
BLAST of Sed0017630 vs. NCBI nr
Match:
KAG6586102.1 (60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020926.1 60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 854.7 bits (2207), Expect = 3.9e-244
Identity = 415/497 (83.50%), Postives = 452/497 (90.95%), Query Frame = 0
Query: 3 REPMDCVLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTW 62
++ + VLCCKCGI M PNAANMC+ CL SEVDITEGLQKQLTIMHCP+C YLQPPRTW
Sbjct: 11 QQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTW 70
Query: 63 LKAQLESKELLTFCIKRLKNLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQS 122
+KAQLESKELLTFCIKRLKNLNKV+L+HAEFVWTEPHSKRIKVKLKV+KEVL GA+LEQS
Sbjct: 71 IKAQLESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQS 130
Query: 123 YVAEYLVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRI 182
YV EY+V DHLC+SCSRV ANPDQWVA VQLRQHVPHRRTFFFLEQLILKH AAANAIRI
Sbjct: 131 YVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAIRI 190
Query: 183 KQMDQGIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISP 242
KQMDQGID FFSNR HGVKFVEFIGKV PIR R DKQLVSHD+KSN HNYK+TFSVE+SP
Sbjct: 191 KQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVELSP 250
Query: 243 ICREDLICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLL 302
ICREDLICLPPKVAVSLGN GP+VIC+KVTN++ALLDPLTLRHC LDA++YWRTSF+ LL
Sbjct: 251 ICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLL 310
Query: 303 TSRQLVEYIVLDIENISTEVNIGGSKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 362
TSRQLVEYIVLDIEN+STEVN+ GSKYILADAQ+ RVSD GRN TI +IRTHLGHILNPG
Sbjct: 311 TSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIRTHLGHILNPG 370
Query: 363 DYALGYDLYGANSNDMELDQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLD 422
DYALGYDLY ANSNDMEL++Y+GLQ+PE ILIKKSYEEKRQRKR KPRSWKLKSLEM++D
Sbjct: 371 DYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMEVD 430
Query: 423 DKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSEMIDGEDGTSVALDEL 482
DKD R EQDK EYEQFLRDLEENPD+R NISLYRN+EYQPSEM DGEDG SV L+EL
Sbjct: 431 DKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLEEL 490
Query: 483 LVDLDINRDDGDNGMHE 500
L DLD++ DGDNGMHE
Sbjct: 491 LADLDLSGGDGDNGMHE 507
BLAST of Sed0017630 vs. NCBI nr
Match:
XP_022965515.1 (60S ribosomal export protein NMD3-like [Cucurbita maxima])
HSP 1 Score: 848.2 bits (2190), Expect = 3.7e-242
Identity = 411/497 (82.70%), Postives = 450/497 (90.54%), Query Frame = 0
Query: 3 REPMDCVLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTW 62
++ + VLCCKCGI M PNAANMC+ CL SEVDITEGLQKQLTIMHCP+C YLQPPRTW
Sbjct: 11 QQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTW 70
Query: 63 LKAQLESKELLTFCIKRLKNLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQS 122
+KAQ+ESKELLTFCIKRLKNLNKV+L+HAEFVWTEPHSKRIKVKLKV+KEVL GA+LEQS
Sbjct: 71 IKAQIESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQS 130
Query: 123 YVAEYLVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRI 182
YV EY+V DHLC+SCSRV ANPDQWVA VQLRQHVPHRRTFFFLEQLILKH AAANAIRI
Sbjct: 131 YVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAIRI 190
Query: 183 KQMDQGIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISP 242
KQMDQGID FFSNR HGVKFVEFIGKV PIR R DKQLVSHD+KSN HNYK+TFSVE+SP
Sbjct: 191 KQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVELSP 250
Query: 243 ICREDLICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLL 302
ICREDLICLPPKVAVSLGN GP+VIC+KVTN+++LLDPLTLRHC LDA++YWRTSF+ LL
Sbjct: 251 ICREDLICLPPKVAVSLGNIGPLVICTKVTNSVSLLDPLTLRHCFLDAEQYWRTSFKPLL 310
Query: 303 TSRQLVEYIVLDIENISTEVNIGGSKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 362
TSRQLVEYIVLDIEN+STEVN+ GSKYILADAQ+ RVSD GRN TI +IRTHLGHILNPG
Sbjct: 311 TSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIRTHLGHILNPG 370
Query: 363 DYALGYDLYGANSNDMELDQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLD 422
DYALGYDLY ANSNDMEL++Y+GLQ+PE ILIKKSYEEKRQRKR KPRSWKLKSL MD+D
Sbjct: 371 DYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLAMDVD 430
Query: 423 DKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSEMIDGEDGTSVALDEL 482
DKD R EQDK EYEQFLRDLEENPD+R NISLYR++EYQPSEM DGEDG SV L+EL
Sbjct: 431 DKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRDREYQPSEMTDGEDGPSVPLEEL 490
Query: 483 LVDLDINRDDGDNGMHE 500
L DLD++ GDNGMHE
Sbjct: 491 LADLDLSEGGGDNGMHE 507
BLAST of Sed0017630 vs. NCBI nr
Match:
XP_022149109.1 (60S ribosomal export protein NMD3 [Momordica charantia] >XP_022149117.1 60S ribosomal export protein NMD3 [Momordica charantia] >XP_022149123.1 60S ribosomal export protein NMD3 [Momordica charantia])
HSP 1 Score: 837.4 bits (2162), Expect = 6.5e-239
Identity = 409/497 (82.29%), Postives = 448/497 (90.14%), Query Frame = 0
Query: 3 REPMDCVLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTW 62
++ + VLCCKCGI M PNAANMC+ CL SEVDITEGLQKQLTIMHCP+C YLQPPRTW
Sbjct: 11 QQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTW 70
Query: 63 LKAQLESKELLTFCIKRLKNLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQS 122
+KAQLESKELLTFCIKRLKNLNKV+LVHAEFVWTEPHSKRIKVKLKV+KEVL GA+LEQS
Sbjct: 71 IKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLNGAILEQS 130
Query: 123 YVAEYLVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRI 182
YVAEY+V DH+C+SCSRV ANPDQWVA VQLRQHVPHRRTFFFLEQLILKH AAA+AIRI
Sbjct: 131 YVAEYVVQDHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRI 190
Query: 183 KQMDQGIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISP 242
KQMDQGID FFSNR HGVKFVEF+GKV PIR RHDKQLVSHD KSN HN+K+TFSVEI P
Sbjct: 191 KQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEICP 250
Query: 243 ICREDLICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLL 302
ICREDLICLPPKVAVSLGN GP+VIC+KVTN+IALLDP TLRHC LDAD+YWRTSFRSLL
Sbjct: 251 ICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPFTLRHCFLDADQYWRTSFRSLL 310
Query: 303 TSRQLVEYIVLDIENISTEVNIGGSKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 362
TSRQLVEYI+LDIEN+S EVN+GGSKY+LADAQV RVSD GRN TI SIRTHLGHILNPG
Sbjct: 311 TSRQLVEYIILDIENVSAEVNVGGSKYVLADAQVARVSDFGRNDTIFSIRTHLGHILNPG 370
Query: 363 DYALGYDLYGANSNDMELDQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLD 422
DYALGYDLY ANSNDMELD+Y+GL +PE IL+KKSYEEKRQRKR KPR+WKLKSL+MD+D
Sbjct: 371 DYALGYDLYAANSNDMELDKYKGLVLPEAILVKKSYEEKRQRKRGKPRAWKLKSLDMDVD 430
Query: 423 DKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSEMIDGEDGTSVALDEL 482
DK R +QDK EYEQFLRDLEENPD+R NISLYRN+EYQ SEM DGEDG SV L+EL
Sbjct: 431 DK--GRVDQDKMNSEYEQFLRDLEENPDLRFNISLYRNREYQLSEMTDGEDGPSVPLEEL 490
Query: 483 LVDLDINRDDGDNGMHE 500
L DLD++ D D+GM+E
Sbjct: 491 LADLDLSEQDEDDGMNE 505
BLAST of Sed0017630 vs. NCBI nr
Match:
XP_022978473.1 (60S ribosomal export protein NMD3-like [Cucurbita maxima] >XP_022978474.1 60S ribosomal export protein NMD3-like [Cucurbita maxima] >XP_022978475.1 60S ribosomal export protein NMD3-like [Cucurbita maxima])
HSP 1 Score: 834.3 bits (2154), Expect = 5.5e-238
Identity = 411/499 (82.36%), Postives = 450/499 (90.18%), Query Frame = 0
Query: 3 REPMDCVLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTW 62
++ + VLCCKCGI M PNAANMC+ CL SEVDITEGLQKQLTIMHCP+C YLQPPRTW
Sbjct: 11 QQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTW 70
Query: 63 LKAQLESKELLTFCIKRLKNLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQS 122
LKAQLESKELLTFCIKRLKNLNKV+LVHAEFVWTEPHSKRIKVKLKV+KEVL GA+LEQS
Sbjct: 71 LKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQS 130
Query: 123 YVAEYLVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRI 182
YVAEY+V DHLC+SC+RV ANPDQWVA VQLRQHVPHRRTFFFLEQLILKH AAANAIRI
Sbjct: 131 YVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAANAIRI 190
Query: 183 KQMDQGIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISP 242
KQMD+GID FFSNR H VKFVEFIGKV PIR R DKQLVSHD+KSN HNYK+TFSVEISP
Sbjct: 191 KQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNYKHTFSVEISP 250
Query: 243 ICREDLICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLL 302
ICREDLICLPPKVAVSLGN GP+VIC+KVTNAIALLDP TLR+C LDAD+YWRTSFRSLL
Sbjct: 251 ICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQYWRTSFRSLL 310
Query: 303 TSRQLVEYIVLDIENISTEVNIGGSKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 362
TSRQLVEY+VLDIEN+STEVN+ GSKY+LA AQV RVSD GRN TI SIRTHLGHILNPG
Sbjct: 311 TSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIRTHLGHILNPG 370
Query: 363 DYALGYDLYGANSNDMELDQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLD 422
DYALGYDLY ANSNDME+++Y+GL++PE ILIKKSYEEKRQRKR KPR+WKLKSLEMD+D
Sbjct: 371 DYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAWKLKSLEMDVD 430
Query: 423 DKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSEMIDGEDGTSVALDEL 482
D+ R E+DK+ EYEQFLRDLEENPD+R NISLYRN+EYQPSEM DGEDG SV L+EL
Sbjct: 431 DR--GRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLEEL 490
Query: 483 LVDLDINR--DDGDNGMHE 500
L DLD++ DGD+GM E
Sbjct: 491 LADLDLDEGDGDGDDGMDE 507
BLAST of Sed0017630 vs. ExPASy Swiss-Prot
Match:
Q6P2Z6 (60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=1)
HSP 1 Score: 454.5 bits (1168), Expect = 1.6e-126
Identity = 227/489 (46.42%), Postives = 329/489 (67.28%), Query Frame = 0
Query: 9 VLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTWLKAQLE 68
+LCC+CGI + PN ANMC++CL +VDI+EG+ KQ+++ C +C RYLQPP TW++ LE
Sbjct: 15 ILCCQCGIPIPPNPANMCVSCLRMQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCALE 74
Query: 69 SKELLTFCIKRLK-NLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQSYVAEY 128
S+ELLT C+K+LK NL+KVRL+ A F+WTEPHSKR+KVKL ++KEV+ GA+L+Q +V +Y
Sbjct: 75 SRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDY 134
Query: 129 LVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRIKQMDQ 188
+V +CD C RV A D W AVVQ+RQ V H++TF++LEQ ILKHR N +R+K++
Sbjct: 135 IVQSQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEIHD 194
Query: 189 GIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISPICRED 248
G+D +++++ H K VEF+ VP R + ++L+SHD +N +NYK TFSVEI P+C+++
Sbjct: 195 GLDFYYASKQHAQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCKDN 254
Query: 249 LICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLLTSRQL 308
L+CL PK+A SLGN I IC +VT+ I L+DP TL+ +D + YWR+ F SL +QL
Sbjct: 255 LVCLSPKLAQSLGNMNQICICVRVTSTIHLIDPSTLQIAEVDGNTYWRSPFNSLFHPKQL 314
Query: 309 VEYIVLDIENISTEVNIGG-----SKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 368
E+IV+D + + G +K+ILA+ V + S++ RTHLGH+LNPG
Sbjct: 315 EEFIVMDTDIVRDRKQAAGAGMRSNKHILAEVWVQKTSEMNTTQQ-YHCRTHLGHLLNPG 374
Query: 369 DYALGYDLYGANSNDMELDQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLD 428
D LG+DL N ND +++ IP+V+LIKKSY+ + KR++ R+WKLK +E D +
Sbjct: 375 DLVLGFDLANCNLNDEFINKMNPHHIPDVVLIKKSYD---RTKRQRRRNWKLKEIERDRE 434
Query: 429 DKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSEMIDGEDGTSVALDEL 488
D + E Q Y+ FL DLEE+ +R N+++Y+N D E ++L E+
Sbjct: 435 GMDTDDERQ------YQDFLEDLEEDEVIRKNVNIYKNANLPVESDTDEEGAPRISLAEM 492
Query: 489 LVDLDINRD 492
L DL I+ D
Sbjct: 495 LEDLHISLD 492
BLAST of Sed0017630 vs. ExPASy Swiss-Prot
Match:
Q6GNS3 (60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1)
HSP 1 Score: 453.8 bits (1166), Expect = 2.7e-126
Identity = 228/495 (46.06%), Postives = 334/495 (67.47%), Query Frame = 0
Query: 9 VLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTWLKAQLE 68
+LCC+CGI + PN ANMC+ CL ++VDI+EG+ KQ+++ C +C RYLQPP TW++ LE
Sbjct: 15 ILCCQCGIPIPPNPANMCVACLRTQVDISEGIPKQVSVHFCKQCERYLQPPGTWIQCALE 74
Query: 69 SKELLTFCIKRLK-NLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQSYVAEY 128
S+ELLT C+K+LK NL+KVRL+ A F+WTEPHSKR+KVKL ++KEV+ GA+L+Q +V +Y
Sbjct: 75 SRELLTLCLKKLKANLSKVRLIDAGFIWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDY 134
Query: 129 LVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRIKQMDQ 188
+V +CD C RV A D W AVVQ+RQ V H++TF++LEQ ILKHR N +R+K++
Sbjct: 135 VVQAQMCDDCHRVEAK-DFWKAVVQVRQKVLHKKTFYYLEQTILKHRLHQNTLRVKEIHD 194
Query: 189 GIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISPICRED 248
G+D +++++ HG K VEF+ VP R + ++L+SHD +N +NYK TFSVEI P+C+++
Sbjct: 195 GLDFYYASKQHGQKMVEFLQCTVPCRFKASQRLISHDIHTNAYNYKSTFSVEIVPVCKDN 254
Query: 249 LICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLLTSRQL 308
L+CL PK+A SLGN I IC++VT+ I L+DP TL+ +D + YWR F SL +Q+
Sbjct: 255 LVCLSPKLAQSLGNMNQICICARVTSTIHLIDPSTLQIAEVDGNTYWRYPFNSLFHPKQM 314
Query: 309 VEYIVLDIENISTEVNIGG-----SKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 368
E+IV+D E I G +K++LA+ V + S++ RTHLGH+LNPG
Sbjct: 315 EEFIVMDTEIIRDRKQAAGAGMRSNKHVLAEVWVQKTSEMNTTQQ-YHCRTHLGHLLNPG 374
Query: 369 DYALGYDLYGANSNDMELDQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLD 428
D LG+DL N ND +++ IP+V+LIKKSY+ R+++R R+WKLK ++ D +
Sbjct: 375 DLVLGFDLSNCNLNDEFINKMNPHHIPDVVLIKKSYDRARRQRR---RNWKLKEMDRDRE 434
Query: 429 DKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSEMIDGEDGTSVALDEL 488
D + E Q Y+ FL DLEE+ +R N+++++N D E ++L E+
Sbjct: 435 GMDTDDERQ------YQDFLEDLEEDELLRKNVNIFKNANVPVESDTDEEGAPRISLAEM 494
Query: 489 LVDLDINRD-DGDNG 497
L DL I++D G+ G
Sbjct: 495 LEDLHISQDATGEEG 498
BLAST of Sed0017630 vs. ExPASy Swiss-Prot
Match:
Q5BLF0 (60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1)
HSP 1 Score: 433.7 bits (1114), Expect = 2.8e-120
Identity = 218/496 (43.95%), Postives = 331/496 (66.73%), Query Frame = 0
Query: 9 VLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTWLKAQLE 68
+LCC CG+ + PN ANMC++CL ++VDI+EG+ KQ+TI C +C RYLQPP +W++ LE
Sbjct: 15 ILCCTCGVPIPPNPANMCVSCLRTQVDISEGIPKQVTIHFCRQCERYLQPPGSWVQCALE 74
Query: 69 SKELLTFCIKRLK-NLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQSYVAEY 128
S+ELL C+K+LK +++KVRL+ A F+WTEPHSKRIK+KL ++KEV+ GA+L+Q + E+
Sbjct: 75 SRELLALCLKKLKASMSKVRLIDAGFLWTEPHSKRIKIKLTIQKEVMNGAILQQVFTVEF 134
Query: 129 LVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRIKQMDQ 188
+V +C+ C RV A D W AVVQ+RQ H++TF++LEQLILKH+ N +RIK++ +
Sbjct: 135 VVQGQMCEDCHRVEAK-DFWKAVVQVRQKTVHKKTFYYLEQLILKHKLHQNTVRIKEIHE 194
Query: 189 GIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISPICRED 248
GID +++ + H K V+F+ VP R + ++L+SHD SNT+NYK TFSVEI P+C+++
Sbjct: 195 GIDFYYATKQHAQKMVDFLQCTVPCRSKASQRLISHDVHSNTYNYKSTFSVEIVPVCKDN 254
Query: 249 LICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLLTSRQL 308
++CL P++A SLGN G + +C +VT++I L+DP TL+ +D +WR F SL + RQL
Sbjct: 255 VVCLSPRLAQSLGNMGQVCVCVRVTSSIHLIDPNTLQIAEVDGSTFWRHPFNSLCSPRQL 314
Query: 309 VEYIVLDIENISTE-----VNIGGSKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 368
E+I++DI+ I + + +K+ LA+ V + S++ + RT +GH+LN G
Sbjct: 315 EEFIIMDIDIIRDQRLGAGAGLKSNKHTLAEVWVQKTSEMDSSHQ-YHCRTFMGHLLNIG 374
Query: 369 DYALGYDLYGANSNDMELDQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLD 428
D LG+D AN ND L++ +P+V+LIKKSY+ + KR + R WKLK ++ + D
Sbjct: 375 DLVLGFDFANANINDEFLNKMNPQHVPDVVLIKKSYD---RMKRARKRVWKLKEMDREKD 434
Query: 429 DKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSEMIDGED--GTSVALD 488
D + E Q Y +FL DLEE+ +R NI+++R+ P E D +D ++L
Sbjct: 435 AADTDDERQ------YTEFLEDLEEDEMLRKNINIFRDASKIPVEESDTDDDGAPRISLA 494
Query: 489 ELLVDLDINRDDGDNG 497
E+L DL ++ G G
Sbjct: 495 EMLEDLSLSDATGGEG 499
BLAST of Sed0017630 vs. ExPASy Swiss-Prot
Match:
Q08DS5 (60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1)
HSP 1 Score: 429.9 bits (1104), Expect = 4.1e-119
Identity = 217/489 (44.38%), Postives = 324/489 (66.26%), Query Frame = 0
Query: 9 VLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTWLKAQLE 68
+LCC CG+ + PN AN+C+ CL S+VDI++G+ KQ++I C +C RY QPP TW++ LE
Sbjct: 15 ILCCDCGVPISPNPANICVACLRSKVDISQGIPKQVSISFCKQCQRYFQPPGTWVQCALE 74
Query: 69 SKELLTFCIKRLK-NLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQSYVAEY 128
S++LL C+K++K L+KVRLV A FVWTEPHSKR+KVKL ++KEV+ GA+L+Q +V +Y
Sbjct: 75 SRDLLALCLKKIKAPLSKVRLVDASFVWTEPHSKRLKVKLTIQKEVMNGAILQQVFVVDY 134
Query: 129 LVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRIKQMDQ 188
+V +C C RV A D W AVVQ+RQ H++TF++LEQLILK+ N +RIK++
Sbjct: 135 VVQPQMCGDCHRVEAK-DFWKAVVQVRQKTLHKKTFYYLEQLILKYGMHQNTLRIKEIHD 194
Query: 189 GIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISPICRED 248
G+D ++S++ H K VEF+ VP R + ++L+S D SNT+NYK TFSVEI PIC+++
Sbjct: 195 GLDFYYSSKQHAQKMVEFLQCTVPTRYKASQRLISQDIHSNTYNYKSTFSVEIVPICKDN 254
Query: 249 LICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLLTSRQL 308
++CL PK+A SLGN I +C +VT+ I L+DP TL+ +D + +W F SL +QL
Sbjct: 255 VVCLSPKLAQSLGNMNQICVCIRVTSVIHLIDPNTLQVADIDGNTFWSHPFNSLCHPKQL 314
Query: 309 VEYIVLD---IENISTEVNIG--GSKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 368
E+IV++ +++I G K+ L + V + S++ + RTHLGH+LNPG
Sbjct: 315 EEFIVMECSIVQDIKRSAGAGMISKKHTLGEVWVQKTSEMNTDKQYF-CRTHLGHLLNPG 374
Query: 369 DYALGYDLYGANSNDMELDQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLD 428
D LG+DL N ND +++ + ++P+V+LIKKSY+ R+++R R+WKLK L D +
Sbjct: 375 DLVLGFDLVNCNLNDEHVNKMKSDRVPDVVLIKKSYDRTRRQRR---RNWKLKELARDRE 434
Query: 429 DKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSEMIDGEDGTSVALDEL 488
+ D + E Q Y+ FL DLEE+ +R N+++YR+ D E ++L E+
Sbjct: 435 NTDTDDERQ------YQDFLEDLEEDEAIRKNVNIYRDSTIPVESDTDDEGAPRISLAEM 492
Query: 489 LVDLDINRD 492
L DL I++D
Sbjct: 495 LEDLHISQD 492
BLAST of Sed0017630 vs. ExPASy Swiss-Prot
Match:
Q55BF2 (60S ribosomal export protein NMD3 OS=Dictyostelium discoideum OX=44689 GN=nmd3 PE=3 SV=1)
HSP 1 Score: 429.9 bits (1104), Expect = 4.1e-119
Identity = 226/507 (44.58%), Postives = 326/507 (64.30%), Query Frame = 0
Query: 9 VLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTWLKAQLE 68
+LCC CG+ + N +NMC++C+ S+VDITEG+ KQLTI C C RYLQPP W A+LE
Sbjct: 12 ILCCMCGVLIPANPSNMCVDCIKSQVDITEGIPKQLTIQWCRGCARYLQPPNHWAIAELE 71
Query: 69 SKELLTFCIKRLKNLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQSYVAEYL 128
S+ELLT CIKR+K LNKV+LV A +VWTEPHSKR+KVKL ++KEV A+L+Q ++ E++
Sbjct: 72 SRELLTICIKRIKGLNKVKLVDAGWVWTEPHSKRLKVKLTIQKEVFTSAILQQIFIIEFI 131
Query: 129 VHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRIKQMDQG 188
V CD C + A D W +VVQLRQ V H+RTF ++EQLILKH A + + IK+ G
Sbjct: 132 VQGQQCDKCQKFEAK-DTWNSVVQLRQKVDHKRTFLYIEQLILKHNAHSQTLNIKEKPDG 191
Query: 189 IDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISPICREDL 248
+D FFSNR H +KFVEFI + P++ + +QL+S D ++N NYKYTFSVEI P+ ++D+
Sbjct: 192 LDFFFSNRNHAMKFVEFISAITPVKTKKSEQLISSDEQNNAANYKYTFSVEIVPLSKDDI 251
Query: 249 ICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLLTSRQLV 308
+CLPPK+A LGN GP+V+ +KV+N I +DP TL + A +W + FR+L + +QLV
Sbjct: 252 VCLPPKIAHQLGNMGPLVVVTKVSNLIHFIDPNTLHTGEISALTFWNSPFRALSSYKQLV 311
Query: 309 EYIVLDIENISTEVNIGGS---KYILADAQVDRVSDLGRNGTILSIRTHLGHILNPGDYA 368
E+ VLD VN+ G+ +Y L+D Q+ R +D G N I IR+HLG+ILNPGD A
Sbjct: 312 EFTVLD-------VNLTGATRGRYALSDIQLMRSADFGANDNIYDIRSHLGNILNPGDLA 371
Query: 369 LGYDLYGANSNDMEL-DQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLDDK 428
LGYD+ +N D +L + Q+P+ +L+KK+Y K + + R W K + + +
Sbjct: 372 LGYDVASSNFPDSDLAGMKKNQQLPDFVLVKKTYPSKNDFRFK--RHWYFKEIPKE-GIE 431
Query: 429 DNNREEQDKRRLEYEQFLRDLEENPDMRLNISLY-----------RNKEYQPSEMIDGED 488
+ + E D+ + E+FLR++E +P++R I++Y R K+ Q + +
Sbjct: 432 NPKKFEIDQMERDREEFLREIEADPELRSKINIYKEADAANILQQRIKKMQEHGIDEDAI 491
Query: 489 GTSVALDELLVDLDINRDDGDNGMHEQ 501
+ALD LL D+ N D ++
Sbjct: 492 KEELALDGLLDDMVNNLTINDEEFEDE 507
BLAST of Sed0017630 vs. ExPASy TrEMBL
Match:
A0A6J1FIM4 (60S ribosomal export protein NMD3 OS=Cucurbita moschata OX=3662 GN=LOC111444268 PE=3 SV=1)
HSP 1 Score: 858.6 bits (2217), Expect = 1.3e-245
Identity = 417/497 (83.90%), Postives = 453/497 (91.15%), Query Frame = 0
Query: 3 REPMDCVLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTW 62
++ + VLCCKCGI M PNAANMC+ CL SEVDITEGLQKQLTIMHCP+C YLQPPRTW
Sbjct: 11 QQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTW 70
Query: 63 LKAQLESKELLTFCIKRLKNLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQS 122
+KAQLESK+LLTFCIKRLKNLNKV+L+HAEFVWTEPHSKRIKVKLKV+KEVL GALLEQS
Sbjct: 71 IKAQLESKKLLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGALLEQS 130
Query: 123 YVAEYLVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRI 182
YV EY+V DHLC+SCSRV ANPDQWVA VQLRQHVPHRRTFFFLEQLILKH AAANAIRI
Sbjct: 131 YVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAIRI 190
Query: 183 KQMDQGIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISP 242
KQMDQGID FFSNR HGVKFVEFIGKV PIR R DKQLVSHD+KSN HNYK+TFSVE+SP
Sbjct: 191 KQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVELSP 250
Query: 243 ICREDLICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLL 302
ICREDLICLPPKVAVSLGN GP+VIC+KVTN++ALLDPLTLRHC LDA++YWRTSF+ LL
Sbjct: 251 ICREDLICLPPKVAVSLGNIGPLVICTKVTNSVALLDPLTLRHCFLDAEQYWRTSFKPLL 310
Query: 303 TSRQLVEYIVLDIENISTEVNIGGSKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 362
TSRQLVEYIVLDIEN+STEVN+ GSKYILADAQ+ RVSD GRN TI +IRTHLGHILNPG
Sbjct: 311 TSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIRTHLGHILNPG 370
Query: 363 DYALGYDLYGANSNDMELDQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLD 422
DYALGYDLY ANSNDMEL++Y+GLQ+PE ILIKKSYEEKRQRKR KPRSWKLKSLEMD+D
Sbjct: 371 DYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLEMDVD 430
Query: 423 DKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSEMIDGEDGTSVALDEL 482
DKD R EQDK LEYEQFLRDLEENPD+R NISLYRN+EYQPSEM DGEDG SV L+EL
Sbjct: 431 DKDQGRAEQDKMHLEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLEEL 490
Query: 483 LVDLDINRDDGDNGMHE 500
L DLD++ DGDNGMHE
Sbjct: 491 LADLDLSEGDGDNGMHE 507
BLAST of Sed0017630 vs. ExPASy TrEMBL
Match:
A0A6J1HNX8 (60S ribosomal export protein NMD3 OS=Cucurbita maxima OX=3661 GN=LOC111465396 PE=3 SV=1)
HSP 1 Score: 848.2 bits (2190), Expect = 1.8e-242
Identity = 411/497 (82.70%), Postives = 450/497 (90.54%), Query Frame = 0
Query: 3 REPMDCVLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTW 62
++ + VLCCKCGI M PNAANMC+ CL SEVDITEGLQKQLTIMHCP+C YLQPPRTW
Sbjct: 11 QQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTW 70
Query: 63 LKAQLESKELLTFCIKRLKNLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQS 122
+KAQ+ESKELLTFCIKRLKNLNKV+L+HAEFVWTEPHSKRIKVKLKV+KEVL GA+LEQS
Sbjct: 71 IKAQIESKELLTFCIKRLKNLNKVKLLHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQS 130
Query: 123 YVAEYLVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRI 182
YV EY+V DHLC+SCSRV ANPDQWVA VQLRQHVPHRRTFFFLEQLILKH AAANAIRI
Sbjct: 131 YVVEYVVQDHLCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHSAAANAIRI 190
Query: 183 KQMDQGIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISP 242
KQMDQGID FFSNR HGVKFVEFIGKV PIR R DKQLVSHD+KSN HNYK+TFSVE+SP
Sbjct: 191 KQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRQDKQLVSHDSKSNVHNYKHTFSVELSP 250
Query: 243 ICREDLICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLL 302
ICREDLICLPPKVAVSLGN GP+VIC+KVTN+++LLDPLTLRHC LDA++YWRTSF+ LL
Sbjct: 251 ICREDLICLPPKVAVSLGNIGPLVICTKVTNSVSLLDPLTLRHCFLDAEQYWRTSFKPLL 310
Query: 303 TSRQLVEYIVLDIENISTEVNIGGSKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 362
TSRQLVEYIVLDIEN+STEVN+ GSKYILADAQ+ RVSD GRN TI +IRTHLGHILNPG
Sbjct: 311 TSRQLVEYIVLDIENVSTEVNVSGSKYILADAQIARVSDFGRNDTIFNIRTHLGHILNPG 370
Query: 363 DYALGYDLYGANSNDMELDQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLD 422
DYALGYDLY ANSNDMEL++Y+GLQ+PE ILIKKSYEEKRQRKR KPRSWKLKSL MD+D
Sbjct: 371 DYALGYDLYRANSNDMELEKYKGLQLPEAILIKKSYEEKRQRKRGKPRSWKLKSLAMDVD 430
Query: 423 DKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSEMIDGEDGTSVALDEL 482
DKD R EQDK EYEQFLRDLEENPD+R NISLYR++EYQPSEM DGEDG SV L+EL
Sbjct: 431 DKDQGRAEQDKMHSEYEQFLRDLEENPDLRFNISLYRDREYQPSEMTDGEDGPSVPLEEL 490
Query: 483 LVDLDINRDDGDNGMHE 500
L DLD++ GDNGMHE
Sbjct: 491 LADLDLSEGGGDNGMHE 507
BLAST of Sed0017630 vs. ExPASy TrEMBL
Match:
A0A6J1D613 (60S ribosomal export protein NMD3 OS=Momordica charantia OX=3673 GN=LOC111017597 PE=3 SV=1)
HSP 1 Score: 837.4 bits (2162), Expect = 3.1e-239
Identity = 409/497 (82.29%), Postives = 448/497 (90.14%), Query Frame = 0
Query: 3 REPMDCVLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTW 62
++ + VLCCKCGI M PNAANMC+ CL SEVDITEGLQKQLTIMHCP+C YLQPPRTW
Sbjct: 11 QQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTW 70
Query: 63 LKAQLESKELLTFCIKRLKNLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQS 122
+KAQLESKELLTFCIKRLKNLNKV+LVHAEFVWTEPHSKRIKVKLKV+KEVL GA+LEQS
Sbjct: 71 IKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLNGAILEQS 130
Query: 123 YVAEYLVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRI 182
YVAEY+V DH+C+SCSRV ANPDQWVA VQLRQHVPHRRTFFFLEQLILKH AAA+AIRI
Sbjct: 131 YVAEYVVQDHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRI 190
Query: 183 KQMDQGIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISP 242
KQMDQGID FFSNR HGVKFVEF+GKV PIR RHDKQLVSHD KSN HN+K+TFSVEI P
Sbjct: 191 KQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEICP 250
Query: 243 ICREDLICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLL 302
ICREDLICLPPKVAVSLGN GP+VIC+KVTN+IALLDP TLRHC LDAD+YWRTSFRSLL
Sbjct: 251 ICREDLICLPPKVAVSLGNLGPLVICTKVTNSIALLDPFTLRHCFLDADQYWRTSFRSLL 310
Query: 303 TSRQLVEYIVLDIENISTEVNIGGSKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 362
TSRQLVEYI+LDIEN+S EVN+GGSKY+LADAQV RVSD GRN TI SIRTHLGHILNPG
Sbjct: 311 TSRQLVEYIILDIENVSAEVNVGGSKYVLADAQVARVSDFGRNDTIFSIRTHLGHILNPG 370
Query: 363 DYALGYDLYGANSNDMELDQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLD 422
DYALGYDLY ANSNDMELD+Y+GL +PE IL+KKSYEEKRQRKR KPR+WKLKSL+MD+D
Sbjct: 371 DYALGYDLYAANSNDMELDKYKGLVLPEAILVKKSYEEKRQRKRGKPRAWKLKSLDMDVD 430
Query: 423 DKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSEMIDGEDGTSVALDEL 482
DK R +QDK EYEQFLRDLEENPD+R NISLYRN+EYQ SEM DGEDG SV L+EL
Sbjct: 431 DK--GRVDQDKMNSEYEQFLRDLEENPDLRFNISLYRNREYQLSEMTDGEDGPSVPLEEL 490
Query: 483 LVDLDINRDDGDNGMHE 500
L DLD++ D D+GM+E
Sbjct: 491 LADLDLSEQDEDDGMNE 505
BLAST of Sed0017630 vs. ExPASy TrEMBL
Match:
A0A6J1IT79 (60S ribosomal export protein NMD3 OS=Cucurbita maxima OX=3661 GN=LOC111478443 PE=3 SV=1)
HSP 1 Score: 834.3 bits (2154), Expect = 2.7e-238
Identity = 411/499 (82.36%), Postives = 450/499 (90.18%), Query Frame = 0
Query: 3 REPMDCVLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTW 62
++ + VLCCKCGI M PNAANMC+ CL SEVDITEGLQKQLTIMHCP+C YLQPPRTW
Sbjct: 11 QQTIGSVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTW 70
Query: 63 LKAQLESKELLTFCIKRLKNLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQS 122
LKAQLESKELLTFCIKRLKNLNKV+LVHAEFVWTEPHSKRIKVKLKV+KEVL GA+LEQS
Sbjct: 71 LKAQLESKELLTFCIKRLKNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQS 130
Query: 123 YVAEYLVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRI 182
YVAEY+V DHLC+SC+RV ANPDQWVA VQLRQHVPHRRTFFFLEQLILKH AAANAIRI
Sbjct: 131 YVAEYVVQDHLCESCARVQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAANAIRI 190
Query: 183 KQMDQGIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISP 242
KQMD+GID FFSNR H VKFVEFIGKV PIR R DKQLVSHD+KSN HNYK+TFSVEISP
Sbjct: 191 KQMDEGIDFFFSNRSHAVKFVEFIGKVAPIRSRSDKQLVSHDSKSNVHNYKHTFSVEISP 250
Query: 243 ICREDLICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLL 302
ICREDLICLPPKVAVSLGN GP+VIC+KVTNAIALLDP TLR+C LDAD+YWRTSFRSLL
Sbjct: 251 ICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRYCFLDADQYWRTSFRSLL 310
Query: 303 TSRQLVEYIVLDIENISTEVNIGGSKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 362
TSRQLVEY+VLDIEN+STEVN+ GSKY+LA AQV RVSD GRN TI SIRTHLGHILNPG
Sbjct: 311 TSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTIFSIRTHLGHILNPG 370
Query: 363 DYALGYDLYGANSNDMELDQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLD 422
DYALGYDLY ANSNDME+++Y+GL++PE ILIKKSYEEKRQRKR KPR+WKLKSLEMD+D
Sbjct: 371 DYALGYDLYAANSNDMEIEKYKGLELPEAILIKKSYEEKRQRKRGKPRAWKLKSLEMDVD 430
Query: 423 DKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSEMIDGEDGTSVALDEL 482
D+ R E+DK+ EYEQFLRDLEENPD+R NISLYRN+EYQPSEM DGEDG SV L+EL
Sbjct: 431 DR--GRAEEDKKNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEMTDGEDGPSVPLEEL 490
Query: 483 LVDLDINR--DDGDNGMHE 500
L DLD++ DGD+GM E
Sbjct: 491 LADLDLDEGDGDGDDGMDE 507
BLAST of Sed0017630 vs. ExPASy TrEMBL
Match:
A0A5D3CM67 (60S ribosomal export protein NMD3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G002220 PE=3 SV=1)
HSP 1 Score: 832.8 bits (2150), Expect = 7.8e-238
Identity = 405/497 (81.49%), Postives = 450/497 (90.54%), Query Frame = 0
Query: 3 REPMDCVLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTW 62
++ + VLCCKCGI M PNAANMC+ CL SEVDITEGLQKQLTIMHCP+C YLQPPRTW
Sbjct: 11 QQTIGTVLCCKCGIPMTPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESYLQPPRTW 70
Query: 63 LKAQLESKELLTFCIKRLKNLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQS 122
+KAQLESKELLTFCIKRL+NLNKV+LVHAEFVWTEPHSKRIKVKLKV+KEVL GA+LEQS
Sbjct: 71 IKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLHGAILEQS 130
Query: 123 YVAEYLVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRI 182
YV EY+V DHLC+SCSR+ ANPDQWVA VQLRQHVPHRRTFFFLEQLILKH AAA+AIRI
Sbjct: 131 YVVEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGAAASAIRI 190
Query: 183 KQMDQGIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISP 242
KQMDQGID FFSNR HGVKFVEF+GKV PIR RHDKQLVSHD KSN HN+K+TFSVEISP
Sbjct: 191 KQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISP 250
Query: 243 ICREDLICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLL 302
ICREDLICLPPKVAVSLGN GP+VIC+KVTNAIALLDP TLRHC LDAD+YWRTSFRSLL
Sbjct: 251 ICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFTLRHCFLDADQYWRTSFRSLL 310
Query: 303 TSRQLVEYIVLDIENISTEVNIGGSKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 362
TSRQLVEY+VLDIEN+STEVN+ GSKY+LA AQV RVSD GRN T+ SI+THLGHILNPG
Sbjct: 311 TSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRNDTMFSIKTHLGHILNPG 370
Query: 363 DYALGYDLYGANSNDMELDQYEGLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEMDLD 422
DYALGYDLYGANSNDMEL++Y+GL++PE ILIKKSYEEKRQRKR KPRSWKLKSL MD+D
Sbjct: 371 DYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQRKRGKPRSWKLKSLAMDVD 430
Query: 423 DKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSEMIDGEDGTSVALDEL 482
DK ++ +++K EYEQFLRDLEENPD+R NISLYRN+EYQPSE+ DGEDG SV LDEL
Sbjct: 431 DK--SKVDENKMNSEYEQFLRDLEENPDLRFNISLYRNREYQPSEITDGEDGPSVPLDEL 490
Query: 483 LVDLDINRDDGDNGMHE 500
L DLD++ +GD+ M+E
Sbjct: 491 LADLDLSEGEGDDAMNE 505
BLAST of Sed0017630 vs. TAIR 10
Match:
AT2G03820.1 (nonsense-mediated mRNA decay NMD3 family protein )
HSP 1 Score: 639.4 bits (1648), Expect = 2.4e-183
Identity = 318/506 (62.85%), Postives = 393/506 (77.67%), Query Frame = 0
Query: 3 REPMDCVLCCKCGIAMEPNAANMCINCLSSEVDITEGLQKQLTIMHCPECVRYLQPPRTW 62
++ + VLCCKCG+ M PNAANMC+NCL SEVDITEGLQK + I +CPEC YLQPP+TW
Sbjct: 13 QQTIGSVLCCKCGVPMAPNAANMCVNCLRSEVDITEGLQKSIQIFYCPECTCYLQPPKTW 72
Query: 63 LKAQLESKELLTFCIKRLKNLNKVRLVHAEFVWTEPHSKRIKVKLKVEKEVLPGALLEQS 122
+K Q ESKELLTFCIKRLKNLNKV+L +AEFVWTEPHSKRIKVKL V+ EVL GA+LEQS
Sbjct: 73 IKCQWESKELLTFCIKRLKNLNKVKLKNAEFVWTEPHSKRIKVKLTVQAEVLNGAVLEQS 132
Query: 123 YVAEYLVHDHLCDSCSRVAANPDQWVAVVQLRQHVPHRRTFFFLEQLILKHRAAANAIRI 182
Y EY V D+LC+SCSR ANPDQWVA +QLRQHV HRRTFF+LEQLIL+H AA+ AIRI
Sbjct: 133 YPVEYTVRDNLCESCSRFQANPDQWVASIQLRQHVSHRRTFFYLEQLILRHDAASRAIRI 192
Query: 183 KQMDQGIDLFFSNRGHGVKFVEFIGKVVPIRDRHDKQLVSHDAKSNTHNYKYTFSVEISP 242
+Q+DQGID FF N+ H FVEF+ KVVPI R D+QLVSHD KS+ +NYKYT+SV+I P
Sbjct: 193 QQVDQGIDFFFGNKSHANSFVEFLRKVVPIEYRQDQQLVSHDVKSSLYNYKYTYSVKICP 252
Query: 243 ICREDLICLPPKVAVSLGNFGPIVICSKVTNAIALLDPLTLRHCILDADRYWRTSFRSLL 302
+CREDL+CLP KVA LGN GP+V+C+KV++ I LLDP TLR LDA +YWR+ FRS L
Sbjct: 253 VCREDLVCLPSKVASGLGNLGPLVVCTKVSDNITLLDPRTLRCAFLDARQYWRSGFRSAL 312
Query: 303 TSRQLVEYIVLDIENISTEVNIGGSKYILADAQVDRVSDLGRNGTILSIRTHLGHILNPG 362
TSRQLV+Y V D+E E +GG KY L+ Q+ R SD+G+ + ++THLGHIL PG
Sbjct: 313 TSRQLVKYFVFDVEPPVGEATVGGQKYALSYVQIARESDIGK---MFYVQTHLGHILKPG 372
Query: 363 DYALGYDLYGANSNDMELDQYE---GLQIPEVILIKKSYEEKRQRKREKPRSWKLKSLEM 422
D ALGYD+YGAN ND E+++Y +PE ILIKK YEE+R+RK++K R+WKLKSL M
Sbjct: 373 DQALGYDIYGANVNDNEMEKYRLSVKNGLPEAILIKKCYEEQRERKQKKSRNWKLKSLPM 432
Query: 423 DLDDKDNNREEQDKRRLEYEQFLRDLEENPDMRLNISLYRNKEYQPSE---MIDGEDGTS 482
++DD R + +K EYE+FLRDLEENP++R NISLYR+K+YQ SE M DGE S
Sbjct: 433 EMDD-SRGRVDPEKTDKEYEEFLRDLEENPELRFNISLYRDKDYQASETASMTDGEGAPS 492
Query: 483 VALDELLVDLDINRDDGDNGMHEQVA 503
V ++ELL DLD++ ++ D+ + +A
Sbjct: 493 VPIEELLADLDLSFEEEDDDDEDDMA 514
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022938070.1 | 2.7e-245 | 83.90 | 60S ribosomal export protein NMD3-like [Cucurbita moschata] | [more] |
KAG6586102.1 | 3.9e-244 | 83.50 | 60S ribosomal export protein NMD3, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022965515.1 | 3.7e-242 | 82.70 | 60S ribosomal export protein NMD3-like [Cucurbita maxima] | [more] |
XP_022149109.1 | 6.5e-239 | 82.29 | 60S ribosomal export protein NMD3 [Momordica charantia] >XP_022149117.1 60S ribo... | [more] |
XP_022978473.1 | 5.5e-238 | 82.36 | 60S ribosomal export protein NMD3-like [Cucurbita maxima] >XP_022978474.1 60S ri... | [more] |
Match Name | E-value | Identity | Description | |
Q6P2Z6 | 1.6e-126 | 46.42 | 60S ribosomal export protein NMD3 OS=Xenopus tropicalis OX=8364 GN=nmd3 PE=2 SV=... | [more] |
Q6GNS3 | 2.7e-126 | 46.06 | 60S ribosomal export protein NMD3 OS=Xenopus laevis OX=8355 GN=nmd3 PE=2 SV=1 | [more] |
Q5BLF0 | 2.8e-120 | 43.95 | 60S ribosomal export protein NMD3 OS=Danio rerio OX=7955 GN=nmd3 PE=2 SV=1 | [more] |
Q08DS5 | 4.1e-119 | 44.38 | 60S ribosomal export protein NMD3 OS=Bos taurus OX=9913 GN=NMD3 PE=2 SV=1 | [more] |
Q55BF2 | 4.1e-119 | 44.58 | 60S ribosomal export protein NMD3 OS=Dictyostelium discoideum OX=44689 GN=nmd3 P... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FIM4 | 1.3e-245 | 83.90 | 60S ribosomal export protein NMD3 OS=Cucurbita moschata OX=3662 GN=LOC111444268 ... | [more] |
A0A6J1HNX8 | 1.8e-242 | 82.70 | 60S ribosomal export protein NMD3 OS=Cucurbita maxima OX=3661 GN=LOC111465396 PE... | [more] |
A0A6J1D613 | 3.1e-239 | 82.29 | 60S ribosomal export protein NMD3 OS=Momordica charantia OX=3673 GN=LOC111017597... | [more] |
A0A6J1IT79 | 2.7e-238 | 82.36 | 60S ribosomal export protein NMD3 OS=Cucurbita maxima OX=3661 GN=LOC111478443 PE... | [more] |
A0A5D3CM67 | 7.8e-238 | 81.49 | 60S ribosomal export protein NMD3 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
Match Name | E-value | Identity | Description | |
AT2G03820.1 | 2.4e-183 | 62.85 | nonsense-mediated mRNA decay NMD3 family protein | [more] |