![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Sed0017456 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGCTTAAGGATATTGGAGCTTCACTTCCTCCGGGGTTTAGATTTTATCCCAGTGATGAAGAATTGGTGTGTCATTATCTTTACAAAAAGATTATGAATGAACAAGTTCTTAAGGGCACTCTAATGGAGATTGATTTGCATACATGTGAGCCATGGCAGCTTCCTGGTAGGTTTTTTTTCTAATCAAAATTAGGATAATTATCTTTCGTTATAATGACACTCGGGTGTCAATAAGAGTAATAATTCAATCAATATAATTATGTGCTCATGATTATCCATCATGATTTAAATCCCAATTATTGTTAATTAAAAAAAACTTGGATTATCTAAAAACAATACCTTGAAAGTTTTTGTTCAAAATAATGATTCTTGAGAGAGGTCAATCAATCTTTCTTCCTTGTGCTTTTGCAGAATTATTAATCATAAAAAAAAGATATAGTTTTGGGAGGGGTTTTTTGTTTTGTTTTTTAAATTTTTATATTTGATTGAATTACTTTTAGGGTGATCTTTTGAGTTTCACCAATATGTTAATGATTATTACAATGGATAATTCCCTAAATTCATGCATATACCTTAATCAATAACCTAGTTTGGTTATATATATATATATATATATATATATGAGCTTTTTTGCATGGTTAAAGCTTTGGCTAATTTTTTGTGTAAACTTGCAACTTACGACATGAGAGTTCTGTCATAAGAAGTGGTTTTATGTAACAGAAATCTGTGTTGGGTACTAAGTTTTTTTTTATGTCTTATTCTTCTGTCTTGAGAGTAACATAATTAATATTTGCAAGTTGGAGAGTAACATAATCTGTGATTAAATCTTTGAGATGCCCTAATTAACTTTATGTGCTAACATCAATTTCATTTTTATTGTTTAATCCCAACCTCATTTATTTTTTGGGTCCCCTAAAATATAACAGGGTACGAGGATTTGGCCTATTTCTCTTATCTTTTACATTAAATATTCAAATAATCTCTCCTTCTCTCTCTCCCCAAACAAAAACAAATGCATTAATGTGAAAATATTGTCTTTAGCATTTTTTGTCAAAAAAATTAAAAAAAAAAGAAACTATATGATTAACTGAGATATTATATATGAAGTAGAAATATCTTAACCACTACATATATACTTTTATCAATTTTTTGTCATTAAGTTATTTTGAAACTAAAATTAAATTAATCTCAAATATTGATTAAGTAAAATTTTATATATGCAAATATGGAAAAAGGGGGCTCAAAATTGAGAAATTTTGTCCCATAATTCAAGTAATATAGGCTGATGAGTCACAATAATCCTTTTTCATATATGTGTTTGAGCTAGCTTGTGCTTGTAGAACAAGTCTCATTAATTATGTTACTCTCCAACTTGCAAATATTCTCCAAACTTATTCCAATCATTTCTTTCTTTATCTTCTTTTGGATATTAGTTTTCACTCTTATTTGACTCCATTTGTTTAGTTTTAATTTCTTTGTTCTAAACCAATTTCTATTTTGGTGTGAAAAAAGTTTGGGACATAATATATATTCAAAGTATATTATACAATCATATCATCCATATATTTCTAGTTTTTGTTTCACACATTTCCCTCTCTAATCCAAATAATCTTATTTTGTTTTTATGATCACCACCTAAATGTAAACCATTACATTGCTAATCATAACAAAAATATCATAATTAAGCCCTTCCATTGAGGTGATTATGGTAACTTAACGTGAAAAAAAATTTGTTTGTTCATTATTAATTATTAGCGGCCAAACATATAATCATAGAGGTCATTTTCCAATTTCCCCTTATCTTTCCATGAATTATTCATAACTCTCAATCATGCATAGTTAGATTAAGACCTTGTTATTTTAATGAAAATGAAAGGTTAATCTAACTAATGATTCCTTTATTATGAAAGAGGTGGCAAAGTTAAACAACAGCGAATGGTACTTCTTCAGCTTTCGAGATCGAAAGTATGCTACGGGGTTTCGGACGAATCGTGCAACGACGTGTGGATATTGGAAAGCTACTGGGAAGGATCGAACGGTGGTGGATCCATCATCGGGAGAGATCGTCGGGATGAGAAAGACTTTAGTGTTTTATAGAAACAGAGCTCCAAATGGGATTAAAACTGAATGGATTATGCATGAATTTCGACTTGAGGCTCCACATAGGCCCCCAAAGGTTTAATTTTTCATCTTTGATTCTCCATTTTTTAAACAAATCCAACGGTGTGAGCACATACACACGCAAAAAAATGTTTATTTATTTATCAATCCTTTAACTTGAGAAGATTCACAATTCATGTGCCCTTAAAGGGTACCAACAAAAAAGTTAGTGTCTTTTTCCACTTTTGGTCATATTCACTTACATTGAGATGAAGGGAGAAGAGAGATCATATCTCAATTGGTGAATCTTTTTTGGTTTATAAATCTTTTCCAAGTTGCATTAACAGAAAATAAATAAACGTTTATATGTTTCTTTTGTTTTTATTTAGAATAGAAGATAGGATTATTCGATGTGTTTTGTTTGTTTTTTAAAAGAGAAAATCAAAATCAAAATAATTATGGATGATATACTTAAAGTAATGACACAAGAAAAGTAAAGTTCATTTGGAACTATCTCTTATTTTTCTTTACCTTTTTTTCTTTTTCAGTTATACTTGGTTTTATGTAATATATTTGCTGATTTAGTCTTTATTATCAAATTTTAATCTTTATTATTAGTGTTTTCTCCAATCAATTCTTTTTCTTCCCAAGTTTGAAACTTTTCCTTTTGTAGTTGGAACAGAATATATTTAGTTATTTTTTCTTCACTTTTTTTCTTTTTATCATTTCTCTATGGATGGAAAAGGACTTATCAATATTCAACTTAAAGTTTATTTTTTAATGTTCATTTCATTCTTAAGCCTTTATGCTTTAACAAGAAAAAATGAACCAACTTTATATGTGTGGGTGCAGGAGGATTGGGTCTTATGTAGAGTGTTTCAAAAGGGCAAGCAAGAAGAGCACAGCATCAAACTCAACCAACACTTTACATTTGAAAATTCCGAGCGCGGTCCTTCTGTCATCCGAGCTCCATCTCCTTCTCCAAACGATCCGAGCCAGATCATCAAGCCTTGTGGGTACAATGTCGATATCGCTTCATTATCCTCAATGGCTCCCCACCATAGCCATAGCCACATTGGCAGCTGTTCTTTCCTCCATCTCCTTCAACTTCCTCAAGAGAAATTAGATGACAATAATCTCAAGATTGATCAACTTTTCTGCCCCAAAAATGACTCTGATTGTGGGGTTTTGTGGGATATGGATTTGGAAGAACATACCTTTGAAGATGGCATTGCATCGAACTTGGACGAAATGGCCTTCGACATCGATAGCAGTCTGGTTTTCCTCTGA ATGGGGCTTAAGGATATTGGAGCTTCACTTCCTCCGGGGTTTAGATTTTATCCCAGTGATGAAGAATTGGTGTGTCATTATCTTTACAAAAAGATTATGAATGAACAAGTTCTTAAGGGCACTCTAATGGAGATTGATTTGCATACATGTGAGCCATGGCAGCTTCCTGAGGTGGCAAAGTTAAACAACAGCGAATGGTACTTCTTCAGCTTTCGAGATCGAAAGTATGCTACGGGGTTTCGGACGAATCGTGCAACGACGTGTGGATATTGGAAAGCTACTGGGAAGGATCGAACGGTGGTGGATCCATCATCGGGAGAGATCGTCGGGATGAGAAAGACTTTAGTGTTTTATAGAAACAGAGCTCCAAATGGGATTAAAACTGAATGGATTATGCATGAATTTCGACTTGAGGCTCCACATAGGCCCCCAAAGGAGGATTGGGTCTTATGTAGAGTGTTTCAAAAGGGCAAGCAAGAAGAGCACAGCATCAAACTCAACCAACACTTTACATTTGAAAATTCCGAGCGCGGTCCTTCTGTCATCCGAGCTCCATCTCCTTCTCCAAACGATCCGAGCCAGATCATCAAGCCTTGTGGGTACAATGTCGATATCGCTTCATTATCCTCAATGGCTCCCCACCATAGCCATAGCCACATTGGCAGCTGTTCTTTCCTCCATCTCCTTCAACTTCCTCAAGAGAAATTAGATGACAATAATCTCAAGATTGATCAACTTTTCTGCCCCAAAAATGACTCTGATTGTGGGGTTTTGTGGGATATGGATTTGGAAGAACATACCTTTGAAGATGGCATTGCATCGAACTTGGACGAAATGGCCTTCGACATCGATAGCAGTCTGGTTTTCCTCTGA ATGGGGCTTAAGGATATTGGAGCTTCACTTCCTCCGGGGTTTAGATTTTATCCCAGTGATGAAGAATTGGTGTGTCATTATCTTTACAAAAAGATTATGAATGAACAAGTTCTTAAGGGCACTCTAATGGAGATTGATTTGCATACATGTGAGCCATGGCAGCTTCCTGAGGTGGCAAAGTTAAACAACAGCGAATGGTACTTCTTCAGCTTTCGAGATCGAAAGTATGCTACGGGGTTTCGGACGAATCGTGCAACGACGTGTGGATATTGGAAAGCTACTGGGAAGGATCGAACGGTGGTGGATCCATCATCGGGAGAGATCGTCGGGATGAGAAAGACTTTAGTGTTTTATAGAAACAGAGCTCCAAATGGGATTAAAACTGAATGGATTATGCATGAATTTCGACTTGAGGCTCCACATAGGCCCCCAAAGGAGGATTGGGTCTTATGTAGAGTGTTTCAAAAGGGCAAGCAAGAAGAGCACAGCATCAAACTCAACCAACACTTTACATTTGAAAATTCCGAGCGCGGTCCTTCTGTCATCCGAGCTCCATCTCCTTCTCCAAACGATCCGAGCCAGATCATCAAGCCTTGTGGGTACAATGTCGATATCGCTTCATTATCCTCAATGGCTCCCCACCATAGCCATAGCCACATTGGCAGCTGTTCTTTCCTCCATCTCCTTCAACTTCCTCAAGAGAAATTAGATGACAATAATCTCAAGATTGATCAACTTTTCTGCCCCAAAAATGACTCTGATTGTGGGGTTTTGTGGGATATGGATTTGGAAGAACATACCTTTGAAGATGGCATTGCATCGAACTTGGACGAAATGGCCTTCGACATCGATAGCAGTCTGGTTTTCCTCTGA MGLKDIGASLPPGFRFYPSDEELVCHYLYKKIMNEQVLKGTLMEIDLHTCEPWQLPEVAKLNNSEWYFFSFRDRKYATGFRTNRATTCGYWKATGKDRTVVDPSSGEIVGMRKTLVFYRNRAPNGIKTEWIMHEFRLEAPHRPPKEDWVLCRVFQKGKQEEHSIKLNQHFTFENSERGPSVIRAPSPSPNDPSQIIKPCGYNVDIASLSSMAPHHSHSHIGSCSFLHLLQLPQEKLDDNNLKIDQLFCPKNDSDCGVLWDMDLEEHTFEDGIASNLDEMAFDIDSSLVFL Homology
BLAST of Sed0017456 vs. NCBI nr
Match: KAG6606369.1 (NAC domain-containing protein 21/22, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 547.4 bits (1409), Expect = 7.7e-152 Identity = 258/291 (88.66%), Postives = 272/291 (93.47%), Query Frame = 0
BLAST of Sed0017456 vs. NCBI nr
Match: XP_023532603.1 (NAC domain-containing protein 21/22-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 546.6 bits (1407), Expect = 1.3e-151 Identity = 257/291 (88.32%), Postives = 272/291 (93.47%), Query Frame = 0
BLAST of Sed0017456 vs. NCBI nr
Match: KAG7036311.1 (NAC domain-containing protein 21/22, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 544.7 bits (1402), Expect = 5.0e-151 Identity = 257/291 (88.32%), Postives = 271/291 (93.13%), Query Frame = 0
BLAST of Sed0017456 vs. NCBI nr
Match: XP_022931178.1 (NAC domain-containing protein 21/22-like [Cucurbita moschata]) HSP 1 Score: 544.3 bits (1401), Expect = 6.5e-151 Identity = 257/291 (88.32%), Postives = 271/291 (93.13%), Query Frame = 0
BLAST of Sed0017456 vs. NCBI nr
Match: XP_022995848.1 (NAC domain-containing protein 21/22-like [Cucurbita maxima]) HSP 1 Score: 543.5 bits (1399), Expect = 1.1e-150 Identity = 255/291 (87.63%), Postives = 272/291 (93.47%), Query Frame = 0
BLAST of Sed0017456 vs. ExPASy Swiss-Prot
Match: Q84TE6 (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana OX=3702 GN=NAC021 PE=1 SV=2) HSP 1 Score: 206.1 bits (523), Expect = 5.5e-52 Identity = 93/162 (57.41%), Postives = 118/162 (72.84%), Query Frame = 0
BLAST of Sed0017456 vs. ExPASy Swiss-Prot
Match: Q9S851 (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=NAC031 PE=1 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 1.6e-51 Identity = 103/222 (46.40%), Postives = 138/222 (62.16%), Query Frame = 0
BLAST of Sed0017456 vs. ExPASy Swiss-Prot
Match: O04017 (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana OX=3702 GN=NAC098 PE=1 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 2.5e-49 Identity = 87/153 (56.86%), Postives = 109/153 (71.24%), Query Frame = 0
BLAST of Sed0017456 vs. ExPASy Swiss-Prot
Match: Q9FLJ2 (NAC domain-containing protein 100 OS=Arabidopsis thaliana OX=3702 GN=NAC100 PE=2 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.3e-48 Identity = 89/153 (58.17%), Postives = 111/153 (72.55%), Query Frame = 0
BLAST of Sed0017456 vs. ExPASy Swiss-Prot
Match: Q5CD17 (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC077 PE=2 SV=2) HSP 1 Score: 192.6 bits (488), Expect = 6.3e-48 Identity = 110/256 (42.97%), Postives = 145/256 (56.64%), Query Frame = 0
BLAST of Sed0017456 vs. ExPASy TrEMBL
Match: A0A6J1EXP5 (NAC domain-containing protein 21/22-like OS=Cucurbita moschata OX=3662 GN=LOC111437436 PE=4 SV=1) HSP 1 Score: 544.3 bits (1401), Expect = 3.1e-151 Identity = 257/291 (88.32%), Postives = 271/291 (93.13%), Query Frame = 0
BLAST of Sed0017456 vs. ExPASy TrEMBL
Match: A0A6J1K973 (NAC domain-containing protein 21/22-like OS=Cucurbita maxima OX=3661 GN=LOC111491255 PE=4 SV=1) HSP 1 Score: 543.5 bits (1399), Expect = 5.4e-151 Identity = 255/291 (87.63%), Postives = 272/291 (93.47%), Query Frame = 0
BLAST of Sed0017456 vs. ExPASy TrEMBL
Match: A0A6J1DMY9 (protein CUP-SHAPED COTYLEDON 3 OS=Momordica charantia OX=3673 GN=LOC111022717 PE=4 SV=1) HSP 1 Score: 528.1 bits (1359), Expect = 2.3e-146 Identity = 247/290 (85.17%), Postives = 264/290 (91.03%), Query Frame = 0
BLAST of Sed0017456 vs. ExPASy TrEMBL
Match: A0A0A0LB56 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G379740 PE=4 SV=1) HSP 1 Score: 502.7 bits (1293), Expect = 1.0e-138 Identity = 252/301 (83.72%), Postives = 270/301 (89.70%), Query Frame = 0
BLAST of Sed0017456 vs. ExPASy TrEMBL
Match: A0A1S3BIA3 (protein CUP-SHAPED COTYLEDON 3-like OS=Cucumis melo OX=3656 GN=LOC103489866 PE=4 SV=1) HSP 1 Score: 498.0 bits (1281), Expect = 2.6e-137 Identity = 252/310 (81.29%), Postives = 270/310 (87.10%), Query Frame = 0
BLAST of Sed0017456 vs. TAIR 10
Match: AT4G28530.1 (NAC domain containing protein 74 ) HSP 1 Score: 279.6 bits (714), Expect = 2.8e-75 Identity = 140/235 (59.57%), Postives = 165/235 (70.21%), Query Frame = 0
BLAST of Sed0017456 vs. TAIR 10
Match: AT1G56010.2 (NAC domain containing protein 1 ) HSP 1 Score: 206.1 bits (523), Expect = 3.9e-53 Identity = 93/162 (57.41%), Postives = 118/162 (72.84%), Query Frame = 0
BLAST of Sed0017456 vs. TAIR 10
Match: AT1G76420.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein ) HSP 1 Score: 204.5 bits (519), Expect = 1.1e-52 Identity = 103/222 (46.40%), Postives = 138/222 (62.16%), Query Frame = 0
BLAST of Sed0017456 vs. TAIR 10
Match: AT2G24430.1 (NAC domain containing protein 38 ) HSP 1 Score: 200.3 bits (508), Expect = 2.1e-51 Identity = 93/194 (47.94%), Postives = 132/194 (68.04%), Query Frame = 0
BLAST of Sed0017456 vs. TAIR 10
Match: AT2G24430.2 (NAC domain containing protein 38 ) HSP 1 Score: 200.3 bits (508), Expect = 2.1e-51 Identity = 93/194 (47.94%), Postives = 132/194 (68.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|