Sed0017428 (gene) Chayote v1

Overview
NameSed0017428
Typegene
OrganismSechium edule (Chayote v1)
DescriptionExpansin
LocationLG05: 40441191 .. 40443338 (-)
RNA-Seq ExpressionSed0017428
SyntenySed0017428
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAAACTTATGAATAAATAAACTCAAATTAAAAGCCAATCCATCCTACATTTGCCATCGTAGCAGTCATTTCCCTCGTCCATAAGTACTCCGCCATTTCTGCCTCATCCCAACATCTCCATTTCCTCTCCCATTTCTACCTCTAACTAAACCCTTCATTTCTTTTTTCATAACAGAAGAAATGGCGGCCATTGTTACTATCTCCATAACTTCTCTAATCCTCCAACTTTTCTCCGCCGCCGTGGAAGCAAGAATCCCGGGTGTATACTCCGGCGGCGCCTGGCAGAGCGCCCACGCCACCTTCTACGGCGGCTCCGACGCATCCGGCACAATGGGTAAGTCCCCAATTCCAAACCCCCAATTAGTTCGTCCAAATCACGACAAAACCCAAGTCTTAATTTACATTTTTATGCAGGCGGAGCATGTGGGTACGGGAATTTGTACAGCCAAGGGTACGGAACGAGCACGGCGGCGCTGAGCACAGCTCTGTTCAACAATGGGCAGAGCTGTGGCGCTTGCTTTGAAATTAAGTGCGCGAATGACCCCAAATGGTGCCATTCTGGCAGCCCTTCCATCTTGATTACCGCTACTAATTTCTGCCCTCCTAATTATGCTCTTCCTAACGACAATGGCGGCTGGTGTAACCCTCCCCGCACCCATTTTGACCTCGCCATGCCCATGTTCCTTAGAATCGCCGAATACCGCGCCGGAATCGTCCCCGTCGCTTACCGCCGGTCAGTTCTATTCACTCGTTTGAATTTATTTTTAGTGTTGTGTTTGAATTACAGCTGTCATTTTAACATTGATTTAATGCACATTTGGTGAGCTGTGTAGTAACTCAAGAAAAGAGTTTAAACTTTTTATTTTTGGAGAGTCAGTAAAGTTGAACTATTAGTAACAAGCTTAATTTAACAATCTAAATCAATATTTCATTTACTATGGCCCATAACTATATTGTATTTTAGTATTCATTTTTAAATTTAAGCTTCATTTCTCTACAATGTAGTAGTCTTAAGGACTATCAATAGCTTAAGAACTTATGACCCTAACTAATCTCACACATATATATCTTGTAATTTTTTTCATTTGTGTTAGGTTTTGTTTAATGCACCTAGATCTAACCCAAATTTGGGCGGAAAGAACTTTAATTTCTAAAACTGTAATATAAAAGCCTAATGGTTATGATCTAAGCTCCTTTTTTTTTTCTTTTATGATAACATCCTAGATTTGTTTTATTTTTATTGTACCCTAGTAATAATTTTGCTTTAATTTTTAATTCAAGATTGTAGGACTAAAATACAGCCAACAATTTTTGTAAGAAGTTTAATATGTATTTTACCTATTTGTCCTCTGAGTTTGAGTTGAATTACGCAGAGTGCCATGCCGGAAACAAGGCGGAATAAGGTTCACAATCAACGGCTTCCGTTACTTCAACTTAGTTCTAATCAGCAACGTGGCGGGTGCAGGGGATATCGTGAGGGTTAGCGTGAAAGGAACGAAGACCGGGTGGATGAGCATGACAAGAAACTGGGGGCAAAATTGGCAATCCAACGCCGTGTTGGTGGGCCAGGCCCTGTCCTTCCGAGTTACGGGCAGTGACCGCCGGACCTCAACCTCCTGGAACATGGTGCCCGCGAATTGGCAGTTCGGTCAAACTTTCACCGGCAAAAACTTCCGCGTTTAACCGCGAGTAAAAACAAATGGTTTTACCTTTTTTTACTTTTGGGTTGTATTTTGTGAAAGTGTTTGTTTGGTTACGAGACTAATCTGATCTGAGCGTGATTTAGAGCAAGGATTGGTGGGGGTATTGTTGGAAGGATATTTTGACCGGGGATTTGTGTTTGGTTCTGGTTATGTCACAGGCTGAAGCGGCGGAATGAAGATTGTGGCCCGCAGTCTACTAAATTTACAGACAATTTCAGTGTTATAGATTTATTTGTATTAATTTCCTACTAATATTATGTGTGGTTTCTTCTTTCTTGTATTAATTATTATACATTTTAAATTAATTGTCTTATGGCCTTATCACTCAATTTTTGAATCATGGTTTGCGTGTATATTACCTTAATTGTTTTGATTTTTTTTTTATTTTATTAAAAGTAATGTTTTGCCTTTGTTTAAATAAATCTTCTCAGATTTGGAAATTGCA

mRNA sequence

TTAAACTTATGAATAAATAAACTCAAATTAAAAGCCAATCCATCCTACATTTGCCATCGTAGCAGTCATTTCCCTCGTCCATAAGTACTCCGCCATTTCTGCCTCATCCCAACATCTCCATTTCCTCTCCCATTTCTACCTCTAACTAAACCCTTCATTTCTTTTTTCATAACAGAAGAAATGGCGGCCATTGTTACTATCTCCATAACTTCTCTAATCCTCCAACTTTTCTCCGCCGCCGTGGAAGCAAGAATCCCGGGTGTATACTCCGGCGGCGCCTGGCAGAGCGCCCACGCCACCTTCTACGGCGGCTCCGACGCATCCGGCACAATGGGCGGAGCATGTGGGTACGGGAATTTGTACAGCCAAGGGTACGGAACGAGCACGGCGGCGCTGAGCACAGCTCTGTTCAACAATGGGCAGAGCTGTGGCGCTTGCTTTGAAATTAAGTGCGCGAATGACCCCAAATGGTGCCATTCTGGCAGCCCTTCCATCTTGATTACCGCTACTAATTTCTGCCCTCCTAATTATGCTCTTCCTAACGACAATGGCGGCTGGTGTAACCCTCCCCGCACCCATTTTGACCTCGCCATGCCCATGTTCCTTAGAATCGCCGAATACCGCGCCGGAATCGTCCCCGTCGCTTACCGCCGAGTGCCATGCCGGAAACAAGGCGGAATAAGGTTCACAATCAACGGCTTCCGTTACTTCAACTTAGTTCTAATCAGCAACGTGGCGGGTGCAGGGGATATCGTGAGGGTTAGCGTGAAAGGAACGAAGACCGGGTGGATGAGCATGACAAGAAACTGGGGGCAAAATTGGCAATCCAACGCCGTGTTGGTGGGCCAGGCCCTGTCCTTCCGAGTTACGGGCAGTGACCGCCGGACCTCAACCTCCTGGAACATGGTGCCCGCGAATTGGCAGTTCGGTCAAACTTTCACCGGCAAAAACTTCCGCGTTTAACCGCGAGTAAAAACAAATGGTTTTACCTTTTTTTACTTTTGGGTTGTATTTTGTGAAAGTGTTTGTTTGGTTACGAGACTAATCTGATCTGAGCGTGATTTAGAGCAAGGATTGGTGGGGGTATTGTTGGAAGGATATTTTGACCGGGGATTTGTGTTTGGTTCTGGTTATGTCACAGGCTGAAGCGGCGGAATGAAGATTGTGGCCCGCAGTCTACTAAATTTACAGACAATTTCAGTGTTATAGATTTATTTGTATTAATTTCCTACTAATATTATGTGTGGTTTCTTCTTTCTTGTATTAATTATTATACATTTTAAATTAATTGTCTTATGGCCTTATCACTCAATTTTTGAATCATGGTTTGCGTGTATATTACCTTAATTGTTTTGATTTTTTTTTTATTTTATTAAAAGTAATGTTTTGCCTTTGTTTAAATAAATCTTCTCAGATTTGGAAATTGCA

Coding sequence (CDS)

ATGGCGGCCATTGTTACTATCTCCATAACTTCTCTAATCCTCCAACTTTTCTCCGCCGCCGTGGAAGCAAGAATCCCGGGTGTATACTCCGGCGGCGCCTGGCAGAGCGCCCACGCCACCTTCTACGGCGGCTCCGACGCATCCGGCACAATGGGCGGAGCATGTGGGTACGGGAATTTGTACAGCCAAGGGTACGGAACGAGCACGGCGGCGCTGAGCACAGCTCTGTTCAACAATGGGCAGAGCTGTGGCGCTTGCTTTGAAATTAAGTGCGCGAATGACCCCAAATGGTGCCATTCTGGCAGCCCTTCCATCTTGATTACCGCTACTAATTTCTGCCCTCCTAATTATGCTCTTCCTAACGACAATGGCGGCTGGTGTAACCCTCCCCGCACCCATTTTGACCTCGCCATGCCCATGTTCCTTAGAATCGCCGAATACCGCGCCGGAATCGTCCCCGTCGCTTACCGCCGAGTGCCATGCCGGAAACAAGGCGGAATAAGGTTCACAATCAACGGCTTCCGTTACTTCAACTTAGTTCTAATCAGCAACGTGGCGGGTGCAGGGGATATCGTGAGGGTTAGCGTGAAAGGAACGAAGACCGGGTGGATGAGCATGACAAGAAACTGGGGGCAAAATTGGCAATCCAACGCCGTGTTGGTGGGCCAGGCCCTGTCCTTCCGAGTTACGGGCAGTGACCGCCGGACCTCAACCTCCTGGAACATGGTGCCCGCGAATTGGCAGTTCGGTCAAACTTTCACCGGCAAAAACTTCCGCGTTTAA

Protein sequence

MAAIVTISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALPNDNGGWCNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLVLISNVAGAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPANWQFGQTFTGKNFRV
Homology
[Close]
BLAST of Sed0017428 vs. NCBI nr
Match: XP_023532276.1 (expansin-A4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 496.5 bits (1277), Expect = 1.4e-136
Identity = 236/260 (90.77%), Postives = 250/260 (96.15%), Query Frame = 0 

Query: 1   MAAIVTISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNL 60
           MAAI+++ I SL+   F  AV+ARIPGVY+GGAWQ+AHATFYGGSDASGTMGGACGYGNL
Sbjct: 1   MAAIISLCIASLL--PFFLAVDARIPGVYTGGAWQNAHATFYGGSDASGTMGGACGYGNL 60

Query: 61  YSQGYGTSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALP 120
           YSQGYG +TAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSIL+TATNFCPPNYALP
Sbjct: 61  YSQGYGVNTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILVTATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180
           NDNGGWCNPPR+HFDLAMPMFL+IAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV
Sbjct: 121 NDNGGWCNPPRSHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180

Query: 181 LISNVAGAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240
           LI+NVAGAGDIVR SVKG+KT WMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW
Sbjct: 181 LITNVAGAGDIVRASVKGSKTEWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240

Query: 241 NMVPANWQFGQTFTGKNFRV 261
           N+VPANWQFGQTFTGKNFRV
Sbjct: 241 NIVPANWQFGQTFTGKNFRV 258

[Close]
BLAST of Sed0017428 vs. NCBI nr
Match: XP_022947915.1 (expansin-A4 [Cucurbita moschata] >KAG6605453.1 Expansin-A4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 495.0 bits (1273), Expect = 4.0e-136
Identity = 235/260 (90.38%), Postives = 249/260 (95.77%), Query Frame = 0 

Query: 1   MAAIVTISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNL 60
           MAAI+++ I SL+   F   V+ARIPGVY+GGAWQ+AHATFYGGSDASGTMGGACGYGNL
Sbjct: 1   MAAIISLCIASLL--PFFLVVDARIPGVYTGGAWQNAHATFYGGSDASGTMGGACGYGNL 60

Query: 61  YSQGYGTSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALP 120
           YSQGYG +TAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSIL+TATNFCPPNYALP
Sbjct: 61  YSQGYGVNTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILVTATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180
           NDNGGWCNPPR+HFDLAMPMFL+IAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV
Sbjct: 121 NDNGGWCNPPRSHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180

Query: 181 LISNVAGAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240
           LI+NVAGAGDIVR SVKG+KT WMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW
Sbjct: 181 LITNVAGAGDIVRASVKGSKTEWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240

Query: 241 NMVPANWQFGQTFTGKNFRV 261
           N+VPANWQFGQTFTGKNFRV
Sbjct: 241 NIVPANWQFGQTFTGKNFRV 258

[Close]
BLAST of Sed0017428 vs. NCBI nr
Match: KAG7035402.1 (Expansin-A4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 495.0 bits (1273), Expect = 4.0e-136
Identity = 235/260 (90.38%), Postives = 249/260 (95.77%), Query Frame = 0 

Query: 1   MAAIVTISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNL 60
           MAAI+++ I SL+   F   V+ARIPGVY+GGAWQ+AHATFYGGSDASGTMGGACGYGNL
Sbjct: 9   MAAIISLCIASLL--PFFLVVDARIPGVYTGGAWQNAHATFYGGSDASGTMGGACGYGNL 68

Query: 61  YSQGYGTSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALP 120
           YSQGYG +TAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSIL+TATNFCPPNYALP
Sbjct: 69  YSQGYGVNTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILVTATNFCPPNYALP 128

Query: 121 NDNGGWCNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180
           NDNGGWCNPPR+HFDLAMPMFL+IAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV
Sbjct: 129 NDNGGWCNPPRSHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 188

Query: 181 LISNVAGAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240
           LI+NVAGAGDIVR SVKG+KT WMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW
Sbjct: 189 LITNVAGAGDIVRASVKGSKTEWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 248

Query: 241 NMVPANWQFGQTFTGKNFRV 261
           N+VPANWQFGQTFTGKNFRV
Sbjct: 249 NIVPANWQFGQTFTGKNFRV 266

[Close]
BLAST of Sed0017428 vs. NCBI nr
Match: XP_038900461.1 (expansin-A4-like [Benincasa hispida])

HSP 1 Score: 494.2 bits (1271), Expect = 6.9e-136
Identity = 234/260 (90.00%), Postives = 249/260 (95.77%), Query Frame = 0 

Query: 1   MAAIVTISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNL 60
           MA I+++ I SL+   FS  V+ARIPGVYSGG WQSAHATFYGG+DASGTMGGACGYGNL
Sbjct: 1   MATIISLCIASLL--SFSLLVDARIPGVYSGGPWQSAHATFYGGADASGTMGGACGYGNL 60

Query: 61  YSQGYGTSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALP 120
           YSQGYG +TAALSTALFN GQSCGACFEIKCANDP+WCHSGSPSILITATNFCPPNYALP
Sbjct: 61  YSQGYGVNTAALSTALFNKGQSCGACFEIKCANDPRWCHSGSPSILITATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180
           NDNGGWCNPPRTHFDLAMPMFL+IAEYRAGIVPV+YRRVPCRKQGGIRFTINGFRYFNLV
Sbjct: 121 NDNGGWCNPPRTHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLV 180

Query: 181 LISNVAGAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240
           LI+NVAGAGDIVRVSVKGT+TGWMS+TRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW
Sbjct: 181 LITNVAGAGDIVRVSVKGTRTGWMSLTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240

Query: 241 NMVPANWQFGQTFTGKNFRV 261
           N+VPA+WQFGQTFTGKNFRV
Sbjct: 241 NIVPAHWQFGQTFTGKNFRV 258

[Close]
BLAST of Sed0017428 vs. NCBI nr
Match: XP_023007369.1 (expansin-A4-like [Cucurbita maxima])

HSP 1 Score: 492.7 bits (1267), Expect = 2.0e-135
Identity = 234/260 (90.00%), Postives = 248/260 (95.38%), Query Frame = 0 

Query: 1   MAAIVTISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNL 60
           MAAI+ + I SL+   F   V+A+IPGVY+GGAWQ+AHATFYGGSDASGTMGGACGYGNL
Sbjct: 1   MAAIIFLCIASLL--PFFLVVDAKIPGVYTGGAWQNAHATFYGGSDASGTMGGACGYGNL 60

Query: 61  YSQGYGTSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALP 120
           YSQGYG +TAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSIL+TATNFCPPNYALP
Sbjct: 61  YSQGYGVNTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILVTATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180
           NDNGGWCNPPR+HFDLAMPMFL+IAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV
Sbjct: 121 NDNGGWCNPPRSHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180

Query: 181 LISNVAGAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240
           LI+NVAGAGDIVR SVKG+KT WMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW
Sbjct: 181 LITNVAGAGDIVRASVKGSKTEWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240

Query: 241 NMVPANWQFGQTFTGKNFRV 261
           N+VPANWQFGQTFTGKNFRV
Sbjct: 241 NIVPANWQFGQTFTGKNFRV 258

[Close]
BLAST of Sed0017428 vs. ExPASy Swiss-Prot
Match: O48818 (Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 4.1e-131
Identity = 222/260 (85.38%), Postives = 243/260 (93.46%), Query Frame = 0 

Query: 1   MAAIVTISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNL 60
           MA  + I  T+ +  LFS A +ARIPG+YSGGAWQ+AHATFYGGSDASGTMGGACGYGNL
Sbjct: 1   MAIKLAILFTTFV--LFSLA-DARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNL 60

Query: 61  YSQGYGTSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALP 120
           YSQGYGT+TAALSTALFNNG SCGACFE+KCANDP+WCHSGSPSILITATNFCPPN A P
Sbjct: 61  YSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQP 120

Query: 121 NDNGGWCNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180
           +DNGGWCNPPR HFDLAMP+FL+IA+YRAGIVPV+YRRVPCRK+GGIRFTING RYFNLV
Sbjct: 121 SDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLV 180

Query: 181 LISNVAGAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240
           LI+NVAGAGDIVR SVKG++TGWMS++RNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW
Sbjct: 181 LITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240

Query: 241 NMVPANWQFGQTFTGKNFRV 261
           NMVP+NWQFGQTF GKNFRV
Sbjct: 241 NMVPSNWQFGQTFVGKNFRV 257

[Close]
BLAST of Sed0017428 vs. ExPASy Swiss-Prot
Match: Q38865 (Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2)

HSP 1 Score: 452.2 bits (1162), Expect = 3.9e-126
Identity = 206/248 (83.06%), Postives = 230/248 (92.74%), Query Frame = 0 

Query: 13  ILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTSTAAL 72
           +L    A  EARIPGVY+GG W++AHATFYGGSDASGTMGGACGYGNLYSQGYG +TAAL
Sbjct: 10  VLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAAL 69

Query: 73  STALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALPNDNGGWCNPPRT 132
           STALFNNG SCGACFE+KCA+DPKWCHSGSPSI ITATNFCPPN+A P+DNGGWCNPPR 
Sbjct: 70  STALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRP 129

Query: 133 HFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLVLISNVAGAGDIV 192
           HFDLAMPMFL+IAEYRAGIVPV++RRVPCRK+GGIRFTINGFRYFNLVL++NVAGAG+IV
Sbjct: 130 HFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIV 189

Query: 193 RVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPANWQFGQT 252
           R+ VKGT T WM+M+RNWGQNWQSN+VLVGQ+LSFRVT SDRR+STSWN+ PANW+FGQT
Sbjct: 190 RLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQT 249

Query: 253 FTGKNFRV 261
           F GKNFRV
Sbjct: 250 FMGKNFRV 257

[Close]
BLAST of Sed0017428 vs. ExPASy Swiss-Prot
Match: Q852A1 (Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 6.7e-126
Identity = 215/259 (83.01%), Postives = 229/259 (88.42%), Query Frame = 0 

Query: 4   IVTISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNLYSQ 63
           +V +  T + LQ+  AA   RIPG Y GG WQSAHATFYGGSDASGTMGGACGYGNLYSQ
Sbjct: 8   LVLVVATVVALQVSPAA--GRIPGAYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQ 67

Query: 64  GYGTSTAALSTALFNNGQSCGACFEIKCANDP--KWCHSGSPSILITATNFCPPNYALPN 123
           GYG + AALSTALFN+GQSCGACFEIKC N P  +WCH GSPSILITATNFCPPNYALP+
Sbjct: 68  GYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPS 127

Query: 124 DNGGWCNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLVL 183
           DNGGWCNPPR HFDLAMPMFL IAEYRAGIVPV+YRRVPCRK+GG+RFTINGFRYFNLVL
Sbjct: 128 DNGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKKGGVRFTINGFRYFNLVL 187

Query: 184 ISNVAGAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWN 243
           I+NVAGAGDIVR SVKGT TGWM M+RNWGQNWQSN+VLVGQALSFRVTGSDRRTSTSWN
Sbjct: 188 ITNVAGAGDIVRASVKGTSTGWMPMSRNWGQNWQSNSVLVGQALSFRVTGSDRRTSTSWN 247

Query: 244 MVPANWQFGQTFTGKNFRV 261
             PA W FGQTF GKNFRV
Sbjct: 248 AAPAGWHFGQTFEGKNFRV 264

[Close]
BLAST of Sed0017428 vs. ExPASy Swiss-Prot
Match: Q9M2S9 (Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 2.8e-124
Identity = 207/260 (79.62%), Postives = 232/260 (89.23%), Query Frame = 0 

Query: 1   MAAIVTISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNL 60
           MA    I +T   L L  +  +A IP V+SGG+WQ+AHATFYGG+DASGTMGGACGYGNL
Sbjct: 1   MAINPLILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGTSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALP 120
           YSQGYGT+TAALST+LFN+GQSCGACFEIKC NDPKWCH G+PS+ +TATNFCPPN A P
Sbjct: 61  YSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQP 120

Query: 121 NDNGGWCNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180
           +DNGGWCNPPR+HFDLAMP+FL+IAEYRAGIVP++YRRV CRK GGIRFTING RYFNLV
Sbjct: 121 SDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLV 180

Query: 181 LISNVAGAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240
           LI+NVAGAGDI R SVKG+KTGWMS+TRNWGQNWQSNAVLVGQ+LSFRVT SDRRTSTSW
Sbjct: 181 LITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSW 240

Query: 241 NMVPANWQFGQTFTGKNFRV 261
           N+ P+NWQFGQTF GKNFRV
Sbjct: 241 NIAPSNWQFGQTFVGKNFRV 260

[Close]
BLAST of Sed0017428 vs. ExPASy Swiss-Prot
Match: O80932 (Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1)

HSP 1 Score: 435.3 bits (1118), Expect = 5.0e-121
Identity = 198/241 (82.16%), Postives = 221/241 (91.70%), Query Frame = 0 

Query: 20  AVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTSTAALSTALFNN 79
           A  A+IPGVYSGG WQ+AHATFYGGSDASGTMGGACGYGNLYSQGYG +TAALSTALFNN
Sbjct: 22  ATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNN 81

Query: 80  GQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALPNDNGGWCNPPRTHFDLAMP 139
           G SCGACFEIKC +DP+WC  G+PSIL+TATNFCPPN+A P+D+GGWCNPPR HFDLAMP
Sbjct: 82  GFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMP 141

Query: 140 MFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLVLISNVAGAGDIVRVSVKGT 199
           MFL+I  YRAGIVPV+YRRVPCRK GGIRFT+NGFRYFNLVL++NVAGAGDI  VSVKG+
Sbjct: 142 MFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGS 201

Query: 200 KTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPANWQFGQTFTGKNFR 259
           KT W+ M+RNWGQNWQSNAVL+GQ+LSFRVT SDRR+STSWN+ PA WQFGQTF+GKNFR
Sbjct: 202 KTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKNFR 261

Query: 260 V 261
           V
Sbjct: 262 V 262

[Close]
BLAST of Sed0017428 vs. ExPASy TrEMBL
Match: A0A6J1G882 (Expansin OS=Cucurbita moschata OX=3662 GN=LOC111451656 PE=3 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.0e-136
Identity = 235/260 (90.38%), Postives = 249/260 (95.77%), Query Frame = 0 

Query: 1   MAAIVTISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNL 60
           MAAI+++ I SL+   F   V+ARIPGVY+GGAWQ+AHATFYGGSDASGTMGGACGYGNL
Sbjct: 1   MAAIISLCIASLL--PFFLVVDARIPGVYTGGAWQNAHATFYGGSDASGTMGGACGYGNL 60

Query: 61  YSQGYGTSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALP 120
           YSQGYG +TAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSIL+TATNFCPPNYALP
Sbjct: 61  YSQGYGVNTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILVTATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180
           NDNGGWCNPPR+HFDLAMPMFL+IAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV
Sbjct: 121 NDNGGWCNPPRSHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180

Query: 181 LISNVAGAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240
           LI+NVAGAGDIVR SVKG+KT WMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW
Sbjct: 181 LITNVAGAGDIVRASVKGSKTEWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240

Query: 241 NMVPANWQFGQTFTGKNFRV 261
           N+VPANWQFGQTFTGKNFRV
Sbjct: 241 NIVPANWQFGQTFTGKNFRV 258

[Close]
BLAST of Sed0017428 vs. ExPASy TrEMBL
Match: A0A6J1L4R5 (Expansin OS=Cucurbita maxima OX=3661 GN=LOC111499881 PE=3 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 9.7e-136
Identity = 234/260 (90.00%), Postives = 248/260 (95.38%), Query Frame = 0 

Query: 1   MAAIVTISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNL 60
           MAAI+ + I SL+   F   V+A+IPGVY+GGAWQ+AHATFYGGSDASGTMGGACGYGNL
Sbjct: 1   MAAIIFLCIASLL--PFFLVVDAKIPGVYTGGAWQNAHATFYGGSDASGTMGGACGYGNL 60

Query: 61  YSQGYGTSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALP 120
           YSQGYG +TAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSIL+TATNFCPPNYALP
Sbjct: 61  YSQGYGVNTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILVTATNFCPPNYALP 120

Query: 121 NDNGGWCNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180
           NDNGGWCNPPR+HFDLAMPMFL+IAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV
Sbjct: 121 NDNGGWCNPPRSHFDLAMPMFLKIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180

Query: 181 LISNVAGAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240
           LI+NVAGAGDIVR SVKG+KT WMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW
Sbjct: 181 LITNVAGAGDIVRASVKGSKTEWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240

Query: 241 NMVPANWQFGQTFTGKNFRV 261
           N+VPANWQFGQTFTGKNFRV
Sbjct: 241 NIVPANWQFGQTFTGKNFRV 258

[Close]
BLAST of Sed0017428 vs. ExPASy TrEMBL
Match: A0A1S3CKT4 (Expansin OS=Cucumis melo OX=3656 GN=LOC103502079 PE=2 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.7e-135
Identity = 229/254 (90.16%), Postives = 244/254 (96.06%), Query Frame = 0 

Query: 7   ISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNLYSQGYG 66
           IS+   +L  FS  ++ARIPGVYSGG WQSAHATFYGG+DASGTMGGACGYGNLYSQGYG
Sbjct: 5   ISLCIALLLSFSLLIDARIPGVYSGGPWQSAHATFYGGADASGTMGGACGYGNLYSQGYG 64

Query: 67  TSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALPNDNGGW 126
            +TAALSTALFN GQSCGACFEIKCANDP+WCHSGSPSILITATNFCPPNYALPNDNGGW
Sbjct: 65  VNTAALSTALFNKGQSCGACFEIKCANDPRWCHSGSPSILITATNFCPPNYALPNDNGGW 124

Query: 127 CNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLVLISNVA 186
           CNPPR+HFDLAMPMFL+IAEYRAGIVPV+YRRVPCRKQGGIRFTINGFRYFNLVLI+NVA
Sbjct: 125 CNPPRSHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVA 184

Query: 187 GAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPAN 246
           GAGDIVRVSVKGT+TGWMS+TRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWN+VPA+
Sbjct: 185 GAGDIVRVSVKGTRTGWMSLTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNIVPAH 244

Query: 247 WQFGQTFTGKNFRV 261
           WQFGQTFTGKNFRV
Sbjct: 245 WQFGQTFTGKNFRV 258

[Close]
BLAST of Sed0017428 vs. ExPASy TrEMBL
Match: A0A5D3DKA0 (Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G001240 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.7e-135
Identity = 229/254 (90.16%), Postives = 244/254 (96.06%), Query Frame = 0 

Query: 7   ISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNLYSQGYG 66
           IS+   +L  FS  ++ARIPGVYSGG WQSAHATFYGG+DASGTMGGACGYGNLYSQGYG
Sbjct: 5   ISLCIALLLSFSLLIDARIPGVYSGGPWQSAHATFYGGADASGTMGGACGYGNLYSQGYG 64

Query: 67  TSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALPNDNGGW 126
            +TAALSTALFN GQSCGACFEIKCANDP+WCHSGSPSILITATNFCPPNYALPNDNGGW
Sbjct: 65  VNTAALSTALFNKGQSCGACFEIKCANDPRWCHSGSPSILITATNFCPPNYALPNDNGGW 124

Query: 127 CNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLVLISNVA 186
           CNPPR+HFDLAMPMFL+IAEYRAGIVPV+YRRVPCRKQGGIRFTINGFRYFNLVLI+NVA
Sbjct: 125 CNPPRSHFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVA 184

Query: 187 GAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPAN 246
           GAGDIVRVSVKGT+TGWMS+TRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWN+VPA+
Sbjct: 185 GAGDIVRVSVKGTRTGWMSLTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNIVPAH 244

Query: 247 WQFGQTFTGKNFRV 261
           WQFGQTFTGKNFRV
Sbjct: 245 WQFGQTFTGKNFRV 258

[Close]
BLAST of Sed0017428 vs. ExPASy TrEMBL
Match: A0A0A0KC92 (Expansin OS=Cucumis sativus OX=3659 GN=Csa_6G190340 PE=3 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 4.8e-135
Identity = 228/248 (91.94%), Postives = 240/248 (96.77%), Query Frame = 0 

Query: 13  ILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTSTAAL 72
           +L  FS  +EARIPGVYSGG WQSAHATFYGGSDASGTMGGACGYGNLYSQGYG +TAAL
Sbjct: 11  LLLSFSLLIEARIPGVYSGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAAL 70

Query: 73  STALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALPNDNGGWCNPPRT 132
           STALFN GQSCGACFEIKCANDP+WCHSGSPSILITATNFCPPNYALPNDNGGWCNPPR+
Sbjct: 71  STALFNKGQSCGACFEIKCANDPRWCHSGSPSILITATNFCPPNYALPNDNGGWCNPPRS 130

Query: 133 HFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLVLISNVAGAGDIV 192
           HFDLAMPMFL+IAEYRAGIVPV+YRRVPCRKQGGIRFTINGFRYFNLVLI+NVAGAGDIV
Sbjct: 131 HFDLAMPMFLKIAEYRAGIVPVSYRRVPCRKQGGIRFTINGFRYFNLVLITNVAGAGDIV 190

Query: 193 RVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPANWQFGQT 252
           RVSVKGT+TGWMS+TRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWN+ PA+WQFGQT
Sbjct: 191 RVSVKGTRTGWMSLTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNIAPAHWQFGQT 250

Query: 253 FTGKNFRV 261
           FTGKNFRV
Sbjct: 251 FTGKNFRV 258

[Close]
BLAST of Sed0017428 vs. TAIR 10
Match: AT2G39700.1 (expansin A4 )

HSP 1 Score: 468.8 bits (1205), Expect = 2.9e-132
Identity = 222/260 (85.38%), Postives = 243/260 (93.46%), Query Frame = 0 

Query: 1   MAAIVTISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNL 60
           MA  + I  T+ +  LFS A +ARIPG+YSGGAWQ+AHATFYGGSDASGTMGGACGYGNL
Sbjct: 1   MAIKLAILFTTFV--LFSLA-DARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNL 60

Query: 61  YSQGYGTSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALP 120
           YSQGYGT+TAALSTALFNNG SCGACFE+KCANDP+WCHSGSPSILITATNFCPPN A P
Sbjct: 61  YSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQP 120

Query: 121 NDNGGWCNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180
           +DNGGWCNPPR HFDLAMP+FL+IA+YRAGIVPV+YRRVPCRK+GGIRFTING RYFNLV
Sbjct: 121 SDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLV 180

Query: 181 LISNVAGAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240
           LI+NVAGAGDIVR SVKG++TGWMS++RNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW
Sbjct: 181 LITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240

Query: 241 NMVPANWQFGQTFTGKNFRV 261
           NMVP+NWQFGQTF GKNFRV
Sbjct: 241 NMVPSNWQFGQTFVGKNFRV 257

[Close]
BLAST of Sed0017428 vs. TAIR 10
Match: AT2G28950.1 (expansin A6 )

HSP 1 Score: 452.2 bits (1162), Expect = 2.8e-127
Identity = 206/248 (83.06%), Postives = 230/248 (92.74%), Query Frame = 0 

Query: 13  ILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTSTAAL 72
           +L    A  EARIPGVY+GG W++AHATFYGGSDASGTMGGACGYGNLYSQGYG +TAAL
Sbjct: 10  VLTTILALSEARIPGVYNGGGWETAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAAL 69

Query: 73  STALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALPNDNGGWCNPPRT 132
           STALFNNG SCGACFE+KCA+DPKWCHSGSPSI ITATNFCPPN+A P+DNGGWCNPPR 
Sbjct: 70  STALFNNGFSCGACFELKCASDPKWCHSGSPSIFITATNFCPPNFAQPSDNGGWCNPPRP 129

Query: 133 HFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLVLISNVAGAGDIV 192
           HFDLAMPMFL+IAEYRAGIVPV++RRVPCRK+GGIRFTINGFRYFNLVL++NVAGAG+IV
Sbjct: 130 HFDLAMPMFLKIAEYRAGIVPVSFRRVPCRKRGGIRFTINGFRYFNLVLVTNVAGAGNIV 189

Query: 193 RVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPANWQFGQT 252
           R+ VKGT T WM+M+RNWGQNWQSN+VLVGQ+LSFRVT SDRR+STSWN+ PANW+FGQT
Sbjct: 190 RLGVKGTHTSWMTMSRNWGQNWQSNSVLVGQSLSFRVTSSDRRSSTSWNIAPANWKFGQT 249

Query: 253 FTGKNFRV 261
           F GKNFRV
Sbjct: 250 FMGKNFRV 257

[Close]
BLAST of Sed0017428 vs. TAIR 10
Match: AT3G55500.1 (expansin A16 )

HSP 1 Score: 446.0 bits (1146), Expect = 2.0e-125
Identity = 207/260 (79.62%), Postives = 232/260 (89.23%), Query Frame = 0 

Query: 1   MAAIVTISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNL 60
           MA    I +T   L L  +  +A IP V+SGG+WQ+AHATFYGG+DASGTMGGACGYGNL
Sbjct: 1   MAINPLILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNL 60

Query: 61  YSQGYGTSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALP 120
           YSQGYGT+TAALST+LFN+GQSCGACFEIKC NDPKWCH G+PS+ +TATNFCPPN A P
Sbjct: 61  YSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQP 120

Query: 121 NDNGGWCNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180
           +DNGGWCNPPR+HFDLAMP+FL+IAEYRAGIVP++YRRV CRK GGIRFTING RYFNLV
Sbjct: 121 SDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLV 180

Query: 181 LISNVAGAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240
           LI+NVAGAGDI R SVKG+KTGWMS+TRNWGQNWQSNAVLVGQ+LSFRVT SDRRTSTSW
Sbjct: 181 LITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSW 240

Query: 241 NMVPANWQFGQTFTGKNFRV 261
           N+ P+NWQFGQTF GKNFRV
Sbjct: 241 NIAPSNWQFGQTFVGKNFRV 260

[Close]
BLAST of Sed0017428 vs. TAIR 10
Match: AT2G37640.1 (Barwin-like endoglucanases superfamily protein )

HSP 1 Score: 435.3 bits (1118), Expect = 3.5e-122
Identity = 198/241 (82.16%), Postives = 221/241 (91.70%), Query Frame = 0 

Query: 20  AVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGTSTAALSTALFNN 79
           A  A+IPGVYSGG WQ+AHATFYGGSDASGTMGGACGYGNLYSQGYG +TAALSTALFNN
Sbjct: 22  ATNAKIPGVYSGGPWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNN 81

Query: 80  GQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALPNDNGGWCNPPRTHFDLAMP 139
           G SCGACFEIKC +DP+WC  G+PSIL+TATNFCPPN+A P+D+GGWCNPPR HFDLAMP
Sbjct: 82  GFSCGACFEIKCTDDPRWCVPGNPSILVTATNFCPPNFAQPSDDGGWCNPPREHFDLAMP 141

Query: 140 MFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLVLISNVAGAGDIVRVSVKGT 199
           MFL+I  YRAGIVPV+YRRVPCRK GGIRFT+NGFRYFNLVL++NVAGAGDI  VSVKG+
Sbjct: 142 MFLKIGLYRAGIVPVSYRRVPCRKIGGIRFTVNGFRYFNLVLVTNVAGAGDINGVSVKGS 201

Query: 200 KTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPANWQFGQTFTGKNFR 259
           KT W+ M+RNWGQNWQSNAVL+GQ+LSFRVT SDRR+STSWN+ PA WQFGQTF+GKNFR
Sbjct: 202 KTDWVRMSRNWGQNWQSNAVLIGQSLSFRVTASDRRSSTSWNVAPATWQFGQTFSGKNFR 261

Query: 260 V 261
           V
Sbjct: 262 V 262

[Close]
BLAST of Sed0017428 vs. TAIR 10
Match: AT5G02260.1 (expansin A9 )

HSP 1 Score: 411.0 bits (1055), Expect = 7.2e-115
Identity = 190/260 (73.08%), Postives = 227/260 (87.31%), Query Frame = 0 

Query: 1   MAAIVTISITSLILQLFSAAVEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNL 60
           MAA V   +  +++  F+A   A+IPGVY+GG W +AHATFYG +DASGTMGGACGYGNL
Sbjct: 1   MAAKVITFMAVMVVTAFTA--NAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNL 60

Query: 61  YSQGYGTSTAALSTALFNNGQSCGACFEIKCANDPKWCHSGSPSILITATNFCPPNYALP 120
           YSQGYG +TAALSTALFNNG SCG+CFE+KC NDP WC  G+PSILITATNFCPPN+   
Sbjct: 61  YSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQA 120

Query: 121 NDNGGWCNPPRTHFDLAMPMFLRIAEYRAGIVPVAYRRVPCRKQGGIRFTINGFRYFNLV 180
           +DNGGWCNPPR HFDLAMPMFL IA+Y+AGIVPV+YRR+PCRK+GGIRFTINGF+YFNLV
Sbjct: 121 SDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLV 180

Query: 181 LISNVAGAGDIVRVSVKGTKTGWMSMTRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSW 240
           L++NVAGAGD+++VSVKG+ T W+ ++RNWGQNWQSNA+LVGQ+LSFRV  SD R+STS 
Sbjct: 181 LVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSN 240

Query: 241 NMVPANWQFGQTFTGKNFRV 261
           N+ P+NWQFGQT++GKNFRV
Sbjct: 241 NIAPSNWQFGQTYSGKNFRV 258

The following BLAST results are available for this feature:
BLAST of Sed0017428 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023532276.11.4e-13690.77expansin-A4 [Cucurbita pepo subsp. pepo][more]
XP_022947915.14.0e-13690.38expansin-A4 [Cucurbita moschata] >KAG6605453.1 Expansin-A4, partial [Cucurbita a... [more]
KAG7035402.14.0e-13690.38Expansin-A4, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_038900461.16.9e-13690.00expansin-A4-like [Benincasa hispida][more]
XP_023007369.12.0e-13590.00expansin-A4-like [Cucurbita maxima][more]
BLAST of Sed0017428 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O488184.1e-13185.38Expansin-A4 OS=Arabidopsis thaliana OX=3702 GN=EXPA4 PE=1 SV=1[more]
Q388653.9e-12683.06Expansin-A6 OS=Arabidopsis thaliana OX=3702 GN=EXPA6 PE=2 SV=2[more]
Q852A16.7e-12683.01Expansin-A7 OS=Oryza sativa subsp. japonica OX=39947 GN=EXPA7 PE=2 SV=1[more]
Q9M2S92.8e-12479.62Expansin-A16 OS=Arabidopsis thaliana OX=3702 GN=EXPA16 PE=2 SV=1[more]
O809325.0e-12182.16Expansin-A3 OS=Arabidopsis thaliana OX=3702 GN=EXPA3 PE=2 SV=1[more]
BLAST of Sed0017428 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1G8822.0e-13690.38Expansin OS=Cucurbita moschata OX=3662 GN=LOC111451656 PE=3 SV=1[more]
A0A6J1L4R59.7e-13690.00Expansin OS=Cucurbita maxima OX=3661 GN=LOC111499881 PE=3 SV=1[more]
A0A1S3CKT43.7e-13590.16Expansin OS=Cucumis melo OX=3656 GN=LOC103502079 PE=2 SV=1[more]
A0A5D3DKA03.7e-13590.16Expansin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G001240 PE=3... [more]
A0A0A0KC924.8e-13591.94Expansin OS=Cucumis sativus OX=3659 GN=Csa_6G190340 PE=3 SV=1[more]
BLAST of Sed0017428 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G39700.12.9e-13285.38expansin A4 [more]
AT2G28950.12.8e-12783.06expansin A6 [more]
AT3G55500.12.0e-12579.62expansin A16 [more]
AT2G37640.13.5e-12282.16Barwin-like endoglucanases superfamily protein [more]
AT5G02260.17.2e-11573.08expansin A9 [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002963ExpansinPRINTSPR01226EXPANSINcoord: 165..177
score: 84.1
coord: 212..233
score: 74.09
coord: 241..257
score: 63.53
coord: 64..78
score: 87.56
coord: 124..141
score: 78.89
coord: 177..198
score: 71.06
coord: 141..154
score: 75.95
coord: 91..102
score: 54.17
coord: 105..115
score: 83.64
IPR007118Expansin/Lol pIPRINTSPR01225EXPANSNFAMLYcoord: 149..165
score: 67.35
coord: 203..217
score: 66.67
coord: 241..255
score: 55.67
coord: 73..91
score: 71.71
coord: 33..48
score: 67.81
coord: 51..69
score: 75.66
IPR007112Expansin/pollen allergen, DPBB domainSMARTSM00837dpbb_1coord: 69..156
e-value: 9.3E-59
score: 211.2
IPR007112Expansin/pollen allergen, DPBB domainPROSITEPS50842EXPANSIN_EG45coord: 52..166
score: 31.51594
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3D2.60.40.760coord: 166..258
e-value: 3.8E-24
score: 86.4
IPR036749Expansin, cellulose-binding-like domain superfamilySUPERFAMILY49590PHL pollen allergencoord: 163..255
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 21..162
e-value: 4.6E-47
score: 161.6
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 33..184
IPR009009RlpA-like protein, double-psi beta-barrel domainPFAMPF03330DPBB_1coord: 69..156
e-value: 6.7E-22
score: 77.6
IPR007117Expansin, cellulose-binding-like domainPFAMPF01357Expansin_Ccoord: 167..244
e-value: 2.8E-25
score: 88.1
IPR007117Expansin, cellulose-binding-like domainPROSITEPS50843EXPANSIN_CBDcoord: 176..255
score: 21.704206
NoneNo IPR availablePANTHERPTHR31867EXPANSIN-A15coord: 9..259
NoneNo IPR availablePANTHERPTHR31867:SF166EXPANSIN-A4coord: 9..259

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0017428.1Sed0017428.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009664 plant-type cell wall organization
cellular_component GO:0005576 extracellular region
cellular_component GO:0016020 membrane