Sed0017401 (gene) Chayote v1

Overview


Name	Sed0017401
Type	gene
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal protein S8
Location	LG03: 45342481 .. 45345503 (-)
RNA-Seq Expression	Sed0017401
Synteny	Sed0017401

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGATTTAATGCGTTTTGTTCTTTTCAAGATTTCTTCTTTGATTGCTGTGTTTTTTTGCTCACAGTTTCAGAATTTTGCTTGAATGTGAAATGCTAGAGTGATTTTTTGTTCTTTATGTTCTTGGTGATTTACCATTTTAATTTAATTTTTATTGACATTCTGGATATATAATTTGCAATTTTTCACTATTTAGGTATTGATTTTCAGCTTTAGAATGTAATTTTAGCATTATAAATTTTCCAGAGATCATTCTTATAGCAGTACCGGTTTCTGAGGTAATTGTTAAATTGATAGTTCAAATGAAATTGTTAAATAGTTCTTAGTACTTTGTGATATTTGGAGCTTTAAGAGAGGTTTGAATTTGTTTGAAATTATTTTTGTAGTTCTTTTAAATCAGTTCATTGTAAATTTAATTTGTTTGCTAAAAAAGTTTGGTCATGGTTCATGTTCCCAAACGAAACTAAGCTGCCTAAGCCTTGTGATCTGCAGAAGCATCCTTGCCCGAGTAAAAAGAGTACTTGAATTCTAGTAAATATTTGGCCGAGTTGAGAATAATAATTATGAAGTAAAATAAGTAGAAAATAGAGGTTTATTATAATTTCTTCAGGAGTTTGTTCCCAAGGGGTGGTACAGTGGTCGAAAACTTGGGCTTTGATGGTATGATTCCTTCAAATTCTCAGGTTCGTGACTCACCTGTGACATTACTCCTTCGATGTCTCCCGGTGTTTGGCCTAGGGACGGGAATTGTTACCCTGGTTTCAAAAAAAAATTCTTTAGGTAGTATACTTTTGTTCTCAAACCTGCAACTCTTTGAGATTTCTCCTGTATCTTTCATGTTTTCTTTGGAAGGTTATGGTTTTTTAGGGTTTGAGGGCTATTTGATTTTTCTTTCAGGAACCCCCTAGACCGTTCTTCACGTCAAGAGCTTTTGCCCGGTCAAGATGGGTACGTCATATACAGATTTTCAGATTTTTCTATATATTTCTGAAGTTTACGTCATTTCTTCCTGTTAATTATGGATGACTTTTGTTGATAGGTATTTCTCGGGATTCTATGCACAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTAATAACTACTATTATTTAGCTGAGTGTGATTTGATAAATCAGTTTTTGCTTTCTTTTTAGTACACAGTGGTTATTTATAGGCGTGAAATACATTTTCTTAGGTTAAGTTATGAAGTAATTGGTGCCCAAGGGGTTTTCGTTTGTTATCTTTTCCAATATACATTTCAATAATCTTGGTTCATCAGCATTCGCTATGTAATCCTCTCCGCTATACTGTTGTTTGTTTTGTTCTAAAGAAATTGTATGTCACTTATAACAACTTCACATTAGTTAAAGGAACGGTGCAATCTCTCTTGTAGAAGCATAATTTTCTGAATGTGTCTTATATTAGTGTTTGATGCTATTAATTTTACTATGTAGAAGTTGAAATGTTTCCTTTATTTATATTTCTTATGCCTTGGTACTGTTTGATGCTATTAATATATTTCTGTTTGATGCTATTAATTTTGATAATGTATTTGCAGTCCTCTTGATATTGTTTCTTTCCCCTTTGTTTGTAAAGGTATGAGCTGGGAAGGCAACCTGCCAACACCAAGCTATCAAGTGACAAGTCAATCAGGAGGATTAGAGTTCGTGGGGGAAATGTGAAGTGGCGTGCCTTTAGGCTCGATACTGGAAACTTCTCATGGGGTAGTGAGGCTGTGACCCGAAAGACCCGTCTTCTTGATGTGGTCTATAATGCCTCTAACAATGAGCTTGTCCGCACTCAAACTTTGGTGAAGAGTGCTATTGTTCAAGTTGATGCAGCACCATTTAAGCAGTGGTATCTTCAGCATTATGGAGTGGATGTTGGACGGAAGAAGAAGATCGCAGCATCTGCTAAGAAGGAAGAGGTAAGGATTTAATAATTTAATGATTGATTGGGTTTATCGAAGTTTCAAACATGTTTTTTTTGTGTCAATAAAGCTTCATGGATAATATATATGGCGTTCTTAATATGATACATCACATGATCCTAAACACAACTTGATTTAAATGTTTCATAGGAAGGTGATGCTGCCACTGAGGAAGTGAAGAAGAGCAACCATGTCCAGCGCAAAATAGAGAAACGTCAGCAGGAACGTAAGCTCGATCCACATATTGAAGAACAATTCACCGGCGGTCGTTTGATGGCTTGTATCTCTTCAAGACCGGGTCAATGTGGCCGAGCAGATGGGTAAGCATTGTGAAGCTCTTAACGATTCTCGATTCTGCTGCTCTCCTTCCTAACTCATTTGAGCACAATCATTGTGGATGAGGAATGATTTTCGGGTAGTGTTTCTGAGTTCTTGCAAACTTTTGACAGATATATCTTGGAAGGCAAGGAGCTTGAATTCTACATGAAGAAGCTCCAAAGGAAGAAGGGAAAAGGAGCTGGTGCTGCCTAAATTTTGTTATCGAGTTATTTTCGGCCGGTGTTTAACGTTCCATTTTCTTCTAACAAAGACATCTGCTCTGTTGCAGCTGAGATGAAACGGCTATTTTGGAACTTCAGCTTTGCTGGTAATATTTGTTCAATTATAACTGTAGTCGTTTTCATGATAACAGATTGTTTATTAGCTCAAGTTTTTCAAGTTACAATTTTTTCTTAGTCTATTTATGTAAGCGGATTAGTTTGGTTTGATCTAGAATTCACACAAGTACAAATGGATTCAAGGTCTCACTTGAGCATTTTTGTTATGCTTCCTAATTATAATTTATAGAGATTTCCTTACACTTTTAGTCCTTTCTATGTAGCTTTTCAATTGGTGAAGAATAATTGGATTGTAGTATTTTTATATGAAGTGGTCAGAAGTGTTGGACACAGATTATT

mRNA sequence

CATGATTTAATGCGTTTTGTTCTTTTCAAGATTTCTTCTTTGATTGCTGTGTTTTTTTGCTCACAGTTTCAGAATTTTGCTTGAATGTGAAATGCTAGAGTGATTTTTTGTTCTTTATGTTCTTGGTGATTTACCATTTTAATTTAATTTTTATTGACATTCTGGATATATAATTTGCAATTTTTCACTATTTAGGTATTGATTTTCAGCTTTAGAATGTAATTTTAGCATTATAAATTTTCCAGAGATCATTCTTATAGCAGTACCGGTTTCTGAGGTAATTGTTAAATTGATAGTTCAAATGAAATTGTTAAATAGTTCTTAGTACTTTGTGATATTTGGAGCTTTAAGAGAGGTTTGAATTTGTTTGAAATTATTTTTGTAGTTCTTTTAAATCAGTTCATTGTAAATTTAATTTGTTTGCTAAAAAAGTTTGGTCATGGTTCATGTTCCCAAACGAAACTAAGCTGCCTAAGCCTTGTGATCTGCAGAAGCATCCTTGCCCGAGTAAAAAGAGTACTTGAATTCTAGTAAATATTTGGCCGAGTTGAGAATAATAATTATGAAGTAAAATAAGTAGAAAATAGAGGTTTATTATAATTTCTTCAGGAGTTTGTTCCCAAGGGGTGGTACAGTGGTCGAAAACTTGGGCTTTGATGGTATGATTCCTTCAAATTCTCAGGTTCGTGACTCACCTGTGACATTACTCCTTCGATGTCTCCCGGTGTTTGGCCTAGGGACGGGAATTGTTACCCTGGTTTCAAAAAAAAATTCTTTAGGAACCCCCTAGACCGTTCTTCACGTCAAGAGCTTTTGCCCGGTCAAGATGGGTATTTCTCGGGATTCTATGCACAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTGGGAAGGCAACCTGCCAACACCAAGCTATCAAGTGACAAGTCAATCAGGAGGATTAGAGTTCGTGGGGGAAATGTGAAGTGGCGTGCCTTTAGGCTCGATACTGGAAACTTCTCATGGGGTAGTGAGGCTGTGACCCGAAAGACCCGTCTTCTTGATGTGGTCTATAATGCCTCTAACAATGAGCTTGTCCGCACTCAAACTTTGGTGAAGAGTGCTATTGTTCAAGTTGATGCAGCACCATTTAAGCAGTGGTATCTTCAGCATTATGGAGTGGATGTTGGACGGAAGAAGAAGATCGCAGCATCTGCTAAGAAGGAAGAGGAAGGTGATGCTGCCACTGAGGAAGTGAAGAAGAGCAACCATGTCCAGCGCAAAATAGAGAAACGTCAGCAGGAACGTAAGCTCGATCCACATATTGAAGAACAATTCACCGGCGGTCGTTTGATGGCTTGTATCTCTTCAAGACCGGGTCAATGTGGCCGAGCAGATGGATATATCTTGGAAGGCAAGGAGCTTGAATTCTACATGAAGAAGCTCCAAAGGAAGAAGGGAAAAGGAGCTGGTGCTGCCTAAATTTTGTTATCGAGTTATTTTCGGCCGGTGTTTAACGTTCCATTTTCTTCTAACAAAGACATCTGCTCTGTTGCAGCTGAGATGAAACGGCTATTTTGGAACTTCAGCTTTGCTGGTAATATTTGTTCAATTATAACTGTAGTCGTTTTCATGATAACAGATTGTTTATTAGCTCAAGTTTTTCAAGTTACAATTTTTTCTTAGTCTATTTATGTAAGCGGATTAGTTTGGTTTGATCTAGAATTCACACAAGTACAAATGGATTCAAGGTCTCACTTGAGCATTTTTGTTATGCTTCCTAATTATAATTTATAGAGATTTCCTTACACTTTTAGTCCTTTCTATGTAGCTTTTCAATTGGTGAAGAATAATTGGATTGTAGTATTTTTATATGAAGTGGTCAGAAGTGTTGGACACAGATTATT

Coding sequence (CDS)

ATGGGTATTTCTCGGGATTCTATGCACAAGAGGCGTGCCACTGGAGGCAAGAAGAAGGCTTGGAGGAAGAAGAGAAAGTATGAGCTGGGAAGGCAACCTGCCAACACCAAGCTATCAAGTGACAAGTCAATCAGGAGGATTAGAGTTCGTGGGGGAAATGTGAAGTGGCGTGCCTTTAGGCTCGATACTGGAAACTTCTCATGGGGTAGTGAGGCTGTGACCCGAAAGACCCGTCTTCTTGATGTGGTCTATAATGCCTCTAACAATGAGCTTGTCCGCACTCAAACTTTGGTGAAGAGTGCTATTGTTCAAGTTGATGCAGCACCATTTAAGCAGTGGTATCTTCAGCATTATGGAGTGGATGTTGGACGGAAGAAGAAGATCGCAGCATCTGCTAAGAAGGAAGAGGAAGGTGATGCTGCCACTGAGGAAGTGAAGAAGAGCAACCATGTCCAGCGCAAAATAGAGAAACGTCAGCAGGAACGTAAGCTCGATCCACATATTGAAGAACAATTCACCGGCGGTCGTTTGATGGCTTGTATCTCTTCAAGACCGGGTCAATGTGGCCGAGCAGATGGATATATCTTGGAAGGCAAGGAGCTTGAATTCTACATGAAGAAGCTCCAAAGGAAGAAGGGAAAAGGAGCTGGTGCTGCCTAA

Protein sequence

MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFRLDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDVGRKKKIAASAKKEEEGDAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA

Homology

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BLAST of Sed0017401 vs. NCBI nr
Match: XP_038891236.1 (40S ribosomal protein S8 [Benincasa hispida])

HSP 1 Score: 414.5 bits (1064), Expect = 5.8e-112
Identity = 210/219 (95.89%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DVGRKKKIAASAKKEEEGDAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRLMAC 180
           D+GRKKK  ASAKK+EEGDAATEEVKKSNHVQRKIEKRQQ+RKLDPHIEEQF  GRLMAC
Sbjct: 121 DIGRKKKTLASAKKDEEGDAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFGSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

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BLAST of Sed0017401 vs. NCBI nr
Match: XP_008451649.1 (PREDICTED: 40S ribosomal protein S8-like [Cucumis melo] >TYK01356.1 40S ribosomal protein S8-like [Cucumis melo var. makuwa])

HSP 1 Score: 414.1 bits (1063), Expect = 7.6e-112
Identity = 209/219 (95.43%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DVGRKKKIAASAKKEEEGDAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRLMAC 180
           D+GRKKK +ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQ+RKLDPHIEEQF+ GRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0017401 vs. NCBI nr
Match: XP_004148331.1 (40S ribosomal protein S8 [Cucumis sativus] >KGN61144.1 hypothetical protein Csa_021356 [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 209/219 (95.43%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DVGRKKKIAASAKKEEEGDAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRLMAC 180
           D+GRKKK +AS KKEEEGDA TEEVKKSNHVQRKIEKRQQ+RKLDPHIEEQF+ GRLMAC
Sbjct: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0017401 vs. NCBI nr
Match: XP_022929761.1 (40S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal protein S8-like [Cucurbita moschata] >XP_022997461.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_022997462.1 40S ribosomal protein S8-like [Cucurbita maxima] >XP_023547179.1 40S ribosomal protein S8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.9 bits (1060), Expect = 1.7e-111
Identity = 208/219 (94.98%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRK+R+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DVGRKKKIAASAKKEEEGDAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRLMAC 180
           D+GRKKK  ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQ+RKLDPHIEEQF+ GRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0017401 vs. NCBI nr
Match: KAG6598870.1 (40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 412.5 bits (1059), Expect = 2.2e-111
Identity = 208/219 (94.98%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRK+R+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DVGRKKKIAASAKKEEEGDAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRLMAC 180
           D+GRKKK  ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQ+RKLDPHIEEQF+ GRLMAC
Sbjct: 121 DIGRKKKTIASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

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BLAST of Sed0017401 vs. ExPASy Swiss-Prot
Match: O81361 (40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.4e-103
Identity = 194/220 (88.18%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DVGRKKKIAASAK-KEEEGDAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRLMA 180
           ++GRKKK AA+ K   EEG+A TEE KKSNHV  K+EKRQQ R LD HIEEQF GG+L+A
Sbjct: 121 EIGRKKKTAAAKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLA 180

Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           CISSRPGQCG+ADG ILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 CISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]

BLAST of Sed0017401 vs. ExPASy Swiss-Prot
Match: P49199 (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 370.9 bits (951), Expect = 9.7e-102
Identity = 191/221 (86.43%), Postives = 204/221 (92.31%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTKLSS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DVGRKKKIAASAKKEEEG---DAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRL 180
           D+GRKKK A +AKK+ EG   +A TEE KKSNHV RK+EKRQQ R LD HIEEQF  GRL
Sbjct: 121 DIGRKKK-APAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 219
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASA 220

[Close]

BLAST of Sed0017401 vs. ExPASy Swiss-Prot
Match: Q08069 (40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2)

HSP 1 Score: 367.5 bits (942), Expect = 1.1e-100
Identity = 187/221 (84.62%), Postives = 201/221 (90.95%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTKLSS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DVGRKKKIAASAKKEEEG---DAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRL 180
           D+GRKKK  A+ K   EG   +AA EE KKSNHV RK+EKR++ R LDPHIEEQF  GRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 219
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK A A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAVA 221

[Close]

BLAST of Sed0017401 vs. ExPASy Swiss-Prot
Match: Q9FIF3 (40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 4.2e-97
Identity = 182/219 (83.11%), Postives = 196/219 (89.50%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNFSWGSEAVTRKTR+LDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DVGRKKKIAASAKKEEEGDAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRLMAC 180
           D+GRKKK  A           TEEVKKSNHVQRK+E RQ+ R LD H+EEQF+ GRL+AC
Sbjct: 121 DIGRKKKGEA---------VTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           I+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 IASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of Sed0017401 vs. ExPASy Swiss-Prot
Match: Q93VG5 (40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.5e-97
Identity = 181/221 (81.90%), Postives = 201/221 (90.95%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DVGRKKKIAASAKKE-EEGD----AATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGG 180
           ++GRKKK A+S KK+ EEG+    AA EEVKKSNH+ RKI  RQ+ R LD HIE+QF  G
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 217
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]

BLAST of Sed0017401 vs. ExPASy TrEMBL
Match: A0A5D3BT12 (40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00420 PE=3 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.7e-112
Identity = 209/219 (95.43%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DVGRKKKIAASAKKEEEGDAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRLMAC 180
           D+GRKKK +ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQ+RKLDPHIEEQF+ GRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0017401 vs. ExPASy TrEMBL
Match: A0A1S3BRZ4 (40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103492879 PE=3 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.7e-112
Identity = 209/219 (95.43%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTR+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DVGRKKKIAASAKKEEEGDAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRLMAC 180
           D+GRKKK +ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQ+RKLDPHIEEQF+ GRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0017401 vs. ExPASy TrEMBL
Match: A0A0A0LJA0 (40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_2G059750 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.3e-112
Identity = 209/219 (95.43%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DVGRKKKIAASAKKEEEGDAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRLMAC 180
           D+GRKKK +AS KKEEEGDA TEEVKKSNHVQRKIEKRQQ+RKLDPHIEEQF+ GRLMAC
Sbjct: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0017401 vs. ExPASy TrEMBL
Match: A0A6J1K537 (40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111492371 PE=3 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 8.2e-112
Identity = 208/219 (94.98%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRK+R+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DVGRKKKIAASAKKEEEGDAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRLMAC 180
           D+GRKKK  ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQ+RKLDPHIEEQF+ GRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0017401 vs. ExPASy TrEMBL
Match: A0A6J1EP23 (40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111436251 PE=3 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 8.2e-112
Identity = 208/219 (94.98%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRK+R+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DVGRKKKIAASAKKEEEGDAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRLMAC 180
           D+GRKKK  ASAKKEEEGDA TEEVKKSNHVQRKIEKRQQ+RKLDPHIEEQF+ GRLMAC
Sbjct: 121 DIGRKKKTVASAKKEEEGDAPTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]

BLAST of Sed0017401 vs. TAIR 10
Match: AT5G59240.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 355.5 bits (911), Expect = 3.0e-98
Identity = 182/219 (83.11%), Postives = 196/219 (89.50%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNFSWGSEAVTRKTR+LDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DVGRKKKIAASAKKEEEGDAATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGGRLMAC 180
           D+GRKKK  A           TEEVKKSNHVQRK+E RQ+ R LD H+EEQF+ GRL+AC
Sbjct: 121 DIGRKKKGEA---------VTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220
           I+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGAA
Sbjct: 181 IASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]

BLAST of Sed0017401 vs. TAIR 10
Match: AT5G20290.1 (Ribosomal protein S8e family protein )

HSP 1 Score: 355.1 bits (910), Expect = 3.9e-98
Identity = 181/221 (81.90%), Postives = 201/221 (90.95%), Query Frame = 0


Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTKLSS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEA TRKTR+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DVGRKKKIAASAKKE-EEGD----AATEEVKKSNHVQRKIEKRQQERKLDPHIEEQFTGG 180
           ++GRKKK A+S KK+ EEG+    AA EEVKKSNH+ RKI  RQ+ R LD HIE+QF  G
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 217
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

The following BLAST results are available for this feature:

BLAST of Sed0017401 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891236.1	5.8e-112	95.89	40S ribosomal protein S8 [Benincasa hispida]	[more]
XP_008451649.1	7.6e-112	95.43	PREDICTED: 40S ribosomal protein S8-like [Cucumis melo] >TYK01356.1 40S ribosoma...	[more]
XP_004148331.1	1.3e-111	95.43	40S ribosomal protein S8 [Cucumis sativus] >KGN61144.1 hypothetical protein Csa_...	[more]
XP_022929761.1	1.7e-111	94.98	40S ribosomal protein S8-like [Cucurbita moschata] >XP_022929762.1 40S ribosomal...	[more]
KAG6598870.1	2.2e-111	94.98	40S ribosomal protein S8, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Sed0017401 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81361	1.4e-103	88.18	40S ribosomal protein S8 OS=Prunus armeniaca OX=36596 GN=RPS8 PE=2 SV=1	[more]
P49199	9.7e-102	86.43	40S ribosomal protein S8 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS8 PE=2 S...	[more]
Q08069	1.1e-100	84.62	40S ribosomal protein S8 OS=Zea mays OX=4577 GN=RPS8 PE=2 SV=2	[more]
Q9FIF3	4.2e-97	83.11	40S ribosomal protein S8-2 OS=Arabidopsis thaliana OX=3702 GN=RPS8B PE=2 SV=1	[more]
Q93VG5	5.5e-97	81.90	40S ribosomal protein S8-1 OS=Arabidopsis thaliana OX=3702 GN=RPS8A PE=1 SV=1	[more]

BLAST of Sed0017401 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BT12	3.7e-112	95.43	40S ribosomal protein S8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3BRZ4	3.7e-112	95.43	40S ribosomal protein S8 OS=Cucumis melo OX=3656 GN=LOC103492879 PE=3 SV=1	[more]
A0A0A0LJA0	6.3e-112	95.43	40S ribosomal protein S8 OS=Cucumis sativus OX=3659 GN=Csa_2G059750 PE=3 SV=1	[more]
A0A6J1K537	8.2e-112	94.98	40S ribosomal protein S8 OS=Cucurbita maxima OX=3661 GN=LOC111492371 PE=3 SV=1	[more]
A0A6J1EP23	8.2e-112	94.98	40S ribosomal protein S8 OS=Cucurbita moschata OX=3662 GN=LOC111436251 PE=3 SV=1	[more]

BLAST of Sed0017401 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59240.1	3.0e-98	83.11	Ribosomal protein S8e family protein	[more]
AT5G20290.1	3.9e-98	81.90	Ribosomal protein S8e family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.290.70		coord: 32..161 e-value: 1.6E-40 score: 140.0 coord: 162..214 e-value: 3.3E-17 score: 64.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..26
None	No IPR available	PANTHER	PTHR10394:SF18	40S RIBOSOMAL PROTEIN S8	coord: 1..217
None	No IPR available	CDD	cd11380	Ribosomal_S8e_like	coord: 5..196 e-value: 7.50063E-58 score: 177.327
IPR022309	Ribosomal protein S8e/ribosomal biogenesis NSA2	PFAM	PF01201	Ribosomal_S8e	coord: 1..196 e-value: 2.2E-55 score: 186.6
IPR001047	Ribosomal protein S8e	TIGRFAM	TIGR00307	TIGR00307	coord: 1..198 e-value: 4.0E-46 score: 154.2
IPR001047	Ribosomal protein S8e	PANTHER	PTHR10394	40S RIBOSOMAL PROTEIN S8	coord: 1..217
IPR018283	Ribosomal protein S8e, conserved site	PROSITE	PS01193	RIBOSOMAL_S8E	coord: 11..30

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017401.1	Sed0017401.1	mRNA
Sed0017401.2	Sed0017401.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome