Sed0017387 (gene) Chayote v1

Overview


Name	Sed0017387
Type	gene
Organism	Sechium edule (Chayote v1)
Description	PMD domain-containing protein
Location	LG11: 5483102 .. 5485829 (+)
RNA-Seq Expression	Sed0017387
Synteny	Sed0017387

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCATTTTGCCGAACGCATTACCTCCGGATTGAAGTATTTGGTGATTTTGAAGGATAAAGAGCAGTTAATTAAGGATGGACTGTCTTTACTTGCTGAAGAGCCCTTAGCTAGTACTCTTTCCCCTACATGGCAACACCTGAATGTCAAGTTTCTGTCTGAACTATCAAGAGAGTTACCCTTTGAAGGCAATGATAAAGCTTGGGTCTTAAAATCTTCAATGCATGGTCGAAATTATAATGAAGACCCCGAACTAACATTAGGGCGTCGCTTGATCGAAGGTGAAACTCATTGGAATACCATTATGAAGATTCATGGTGATTGGTCTTTCATTGATTTTTATTGGGAATGGCTAGAATTTTTCGTTGGTCGTAATGAGAAAGTGCTTAACCAGAATCGCTTACGTAATGTGGTGATGGCTTCTCTCTATACTTATGATCATTGTAATGATGTGGTTCGTGCTTTCTGTGAAGGTTGGTGCCCCCGGACGAATACCCTTTTTACCGCAATGGGTGAAGTCTCTATCTCGTTATGGGATTTATGGGATATTTGTGGTCTTCCTATCAAAGGAAGATTTTATGAGGAGGTTATTCCGACTCTACAAGAGCTGACAGAATATCGAGGTAACTATAAGGTTCTCCCTAAAAGTTGTGAACACCTATTCCACGCATATTATAAGATAGCCACCTTGGGAACTGAACGTGTGTCTTCTTCAAAAGTCGTATTTGTTAGCTCTTGGATCGCCTTTTGGTTTAAAGACATCAAAAGATACAAAAGACCTACTGGACGGTCAAAAAGGAAGACTTCTCGAGCTCCATCAACCCAAAATCCAGACGGGACCAAAATTAAGTATCGTGCCTGGACGAGCTGTGAAAATAAGATGTTTCATGATCTTGATGTAGATGAAGATTGGTGCGACAAGACTTATTTGGCAGCCTTCTTATCTTGTTGGCTGTGCGTTTTTGTTTTTCCTAGAAAGGGACCTCAAGTCATCCGGCCTGGAGTGTTTAGAATTGCTAGCCAAATGGCTGAGGGTCATGTCTTTAGCCTTGCTGTCCCAACCTTAGCTAACTTATACCATGGATTAGGTATAATCACTCGGGCTTCTAACCCGATCGGACGTGTAGACGTTTGTTTGCCTATGCACTTCATTCATGGATGGCTTGCTTATTATATCAAAACACATTTTGAAGTTCCAAAGAAAATTCGAGGTGCTCGAATGGTTGATTTCTCCGATGAGGGTGGTGCCATACATTTTGATGAGTACGAAGCTCGAGAATTGATTCATCATGGAGGATCTATCGCATGGGGTGTAACTATTCATGGAAGAAATAAACATGAAGAAATAATGAGATAATCGTAATATATCATCCTTCGATTCTTCATATCTCATGAGCCTTCGATCGTGCTACTTATCTGCTAGATTTGGTGATTTAATGATCATTGAACCCTACAACCCTTATCGAATTGGGCGACAATTCGGATTTTTTCAAGATGTCCCATATGACTTAGAAGGTAGTGTTCCATCGGCCAGTCTTGATAATATCTTACATCATTGGAGGATTTGCACAAAAACCGAATAAAGATCTCGAGTTCATTTGCTACTCGATCACTACATTTACGGGATCAAGTCTCTCAACGATATAAAAGATGGTGGCTAGCGAAGCACAGTAATTATTTCGAAGATAATGTGGTAAAATTAGTAGGAAGCGTTATGCCTACTTCATCCAAACCCAAGCTTCCCAAAGGAAACGGAGGAAATCATGGTGGAAAGCAAATTCGTTTACCTGAAGAAGAACCCCCAGCTCCAAAACGAGGCATTCGGATTTCAGCTGTTAGAAAGCAAGATGTCCGAGAAGAAAATATTCAAAAACGGCATGTTGAGGAACAAAATGATGACGAACAACATGTTGAAGATCAAGATGTTCAAGAACGCAATGTTGATGCTCAAATTATTGAAGCAGAAGATGTTGAAGCTCATCACGTTGGAGAGCAATGTGTTGGAAGACCAAATCTTGATGAACAAGGTATTCAAGAATCAGAACATGGTGAATCGACTAATGAAAGTCCTCGTGACCGTCATTGGAATAGACTGCAAAAACGACCAAAGCTGGTTGATATCATGTAACAGCCCAGTTTTCTATCCCAGTTTTCGAGGTGCCTTCGGGTCAAGTTTCGGTTGTTGGTTGGGTCGTTAGAGCGGTTTTGACCCTTGGGGGTATTTTGGTCCTTTGGCTCTTCGGGCAGAATTTGTGGATTTTCAGGGCTTCGAGGTGGCTCCTGCCTTTACCGTGGCTTGTTTGGGTTGGACTGCGAGTCCCGAGATGTTTGGGCTAGTCGTTTGTAAGTTCGGTTGTGATTTGGGATTTTTGCAAAGTGATGGTTGGTTGTGTGCTTCCTTTGGGATTCGAGCCCGGGCCTTTAGTGTTGCTTAGGGAGTTGGATTTAAGTGAGTTTGATTTATTGGAAAAGATTTCTTCGATCGGGTCTCGAAGGAGGAAGTCGGGAAAAGGGATTTTGAGGTTTTAAGTGGATAAGGATGGAAAATGGAATTAAAATCCCATTTTTCCTTTTATTTCCCTTTTCTTTTATTTTTTTTTCCCTTTTTGTCCAAACCCATTTTCCTTTTCTTTTTATTTTTCTTTTTCTTTTTCTTTTTTTCTCTTTTCTCTCTCTCTCTCTCTTTCTCCCCCGACCTAGCCGCACTTCACTCGAGCCGCCAGTGA

mRNA sequence

ATGGTGCATTTTGCCGAACGCATTACCTCCGGATTGAAGTATTTGGTGATTTTGAAGGATAAAGAGCAGTTAATTAAGGATGGACTGTCTTTACTTGCTGAAGAGCCCTTAGCTAGTACTCTTTCCCCTACATGGCAACACCTGAATGTCAAGTTTCTGTCTGAACTATCAAGAGAGTTACCCTTTGAAGGCAATGATAAAGCTTGGGTCTTAAAATCTTCAATGCATGGTCGAAATTATAATGAAGACCCCGAACTAACATTAGGGCGTCGCTTGATCGAAGGTGAAACTCATTGGAATACCATTATGAAGATTCATGGTGATTGGTCTTTCATTGATTTTTATTGGGAATGGCTAGAATTTTTCGTTGGTCGTAATGAGAAAGTGCTTAACCAGAATCGCTTACGTAATGTGGTGATGGCTTCTCTCTATACTTATGATCATTGTAATGATGTGGTTCGTGCTTTCTGTGAAGGTTGGTGCCCCCGGACGAATACCCTTTTTACCGCAATGGGATGGAAAATGGAATTAAAATCCCATTTTTCCTTTTATTTCCCTTTTCTTTTATTTTTTTTTCCCTTTTTGTCCAAACCCATTTTCCTTTTCTTTTTATTTTTCTTTTTCTTTTTCTTTTTTTCTCTTTTCTCTCTCTCTCTCTCTTTCTCCCCCGACCTAGCCGCACTTCACTCGAGCCGCCAGTGA

Coding sequence (CDS)

ATGGTGCATTTTGCCGAACGCATTACCTCCGGATTGAAGTATTTGGTGATTTTGAAGGATAAAGAGCAGTTAATTAAGGATGGACTGTCTTTACTTGCTGAAGAGCCCTTAGCTAGTACTCTTTCCCCTACATGGCAACACCTGAATGTCAAGTTTCTGTCTGAACTATCAAGAGAGTTACCCTTTGAAGGCAATGATAAAGCTTGGGTCTTAAAATCTTCAATGCATGGTCGAAATTATAATGAAGACCCCGAACTAACATTAGGGCGTCGCTTGATCGAAGGTGAAACTCATTGGAATACCATTATGAAGATTCATGGTGATTGGTCTTTCATTGATTTTTATTGGGAATGGCTAGAATTTTTCGTTGGTCGTAATGAGAAAGTGCTTAACCAGAATCGCTTACGTAATGTGGTGATGGCTTCTCTCTATACTTATGATCATTGTAATGATGTGGTTCGTGCTTTCTGTGAAGGTTGGTGCCCCCGGACGAATACCCTTTTTACCGCAATGGGATGGAAAATGGAATTAAAATCCCATTTTTCCTTTTATTTCCCTTTTCTTTTATTTTTTTTTCCCTTTTTGTCCAAACCCATTTTCCTTTTCTTTTTATTTTTCTTTTTCTTTTTCTTTTTTTCTCTTTTCTCTCTCTCTCTCTCTTTCTCCCCCGACCTAGCCGCACTTCACTCGAGCCGCCAGTGA

Protein sequence

MVHFAERITSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHLNVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWLEFFVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGWKMELKSHFSFYFPFLLFFFPFLSKPIFLFFLFFFFFFFFSLFSLSLSFSPDLAALHSSRQ

Homology

[Close]

BLAST of Sed0017387 vs. NCBI nr
Match: KAA0061098.1 (putative mitochondrial protein [Cucumis melo var. makuwa] >TYK03768.1 putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 190.3 bits (482), Expect = 1.9e-44
Identity = 92/173 (53.18%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 1   MVHFAERITSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+P A T +  W  L N   LS LS E
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQSREDGLSLIVEKPWAGTFADHWPRLDNNSVLSRLSVE 60

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+S +H    N    LT G+RLIEG+THW T+ K+ G++ F D YWEWL
Sbjct: 61  IPLSEGKSAWVLQSFIHDEAPNSGRALTFGQRLIEGQTHWGTVTKVPGEFCFTDCYWEWL 120

Query: 121 EFFVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMG 173
           E  VGRN ++L    L   V ASLYTYD  NDVVRAFCE WCP TNTL T  G
Sbjct: 121 ELVVGRNTRLLYSTHLYGAVTASLYTYDRNNDVVRAFCEAWCPSTNTLHTMAG 173

[Close]

BLAST of Sed0017387 vs. NCBI nr
Match: KAA0047478.1 (hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa])

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-43
Identity = 91/173 (52.60%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 1   MVHFAERITSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+P A   +  W  L N   L  LS E
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T+ K+ G++ F D YWEWL
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120

Query: 121 EFFVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMG 173
           E  VGRN ++L   RL   V ASLYTYD  +DVVRAFCE WCP TNTL T  G
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAG 173

[Close]

BLAST of Sed0017387 vs. NCBI nr
Match: TYK02261.1 (hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa])

HSP 1 Score: 184.9 bits (468), Expect = 8.0e-43
Identity = 89/173 (51.45%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 1   MVHFAERITSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ QL +DGLSL+ E+P A   +  W  L N   L  L  E
Sbjct: 16  MVYFTERFLSGVRHLVILSDRNQLREDGLSLIVEKPWAGAFADHWSRLDNNSVLPRLFVE 75

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T++K+ G++ F D YWEWL
Sbjct: 76  VPLSEEKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVIKVPGEFCFTDCYWEWL 135

Query: 121 EFFVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMG 173
           E  VG+N ++L    L   V ASLYTYD   DVVRAFCE WCP TNTL T  G
Sbjct: 136 ELVVGQNSRLLYSTHLYGTVTASLYTYDRNGDVVRAFCEAWCPSTNTLHTMAG 188

[Close]

BLAST of Sed0017387 vs. NCBI nr
Match: KAA0060611.1 (hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa])

HSP 1 Score: 184.9 bits (468), Expect = 8.0e-43
Identity = 89/173 (51.45%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 1   MVHFAERITSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ QL +DGLSL+ E+P A   +  W  L N   L  L  E
Sbjct: 16  MVYFTERFLSGVRHLVILSDRNQLREDGLSLIVEKPWAGAFADHWSRLDNNSVLPRLFVE 75

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T++K+ G++ F D YWEWL
Sbjct: 76  VPLSEEKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVIKVPGEFCFTDCYWEWL 135

Query: 121 EFFVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMG 173
           E  VG+N ++L    L   V ASLYTYD   DVVRAFCE WCP TNTL T  G
Sbjct: 136 ELVVGQNSRLLYSTHLYGTVTASLYTYDRNGDVVRAFCEAWCPSTNTLHTMAG 188

[Close]

BLAST of Sed0017387 vs. NCBI nr
Match: TYK19639.1 (hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa])

HSP 1 Score: 183.0 bits (463), Expect = 3.0e-42
Identity = 90/173 (52.02%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 1   MVHFAERITSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+  A   +  W  L N   L  LS E
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKLWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T+ K+ G++ F D YWEWL
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120

Query: 121 EFFVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMG 173
           E  VGRN ++L    L +VV ASLYTYD  +DVVRAFCE WCP TNTL T  G
Sbjct: 121 ELVVGRNTRLLYSTHLYSVVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAG 173

[Close]

BLAST of Sed0017387 vs. ExPASy TrEMBL
Match: A0A5D3BXQ4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001510 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 9.2e-45
Identity = 92/173 (53.18%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 1   MVHFAERITSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+P A T +  W  L N   LS LS E
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQSREDGLSLIVEKPWAGTFADHWPRLDNNSVLSRLSVE 60

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+S +H    N    LT G+RLIEG+THW T+ K+ G++ F D YWEWL
Sbjct: 61  IPLSEGKSAWVLQSFIHDEAPNSGRALTFGQRLIEGQTHWGTVTKVPGEFCFTDCYWEWL 120

Query: 121 EFFVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMG 173
           E  VGRN ++L    L   V ASLYTYD  NDVVRAFCE WCP TNTL T  G
Sbjct: 121 ELVVGRNTRLLYSTHLYGAVTASLYTYDRNNDVVRAFCEAWCPSTNTLHTMAG 173

[Close]

BLAST of Sed0017387 vs. ExPASy TrEMBL
Match: A0A5A7TX42 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00950 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.0e-43
Identity = 91/173 (52.60%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 1   MVHFAERITSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+P A   +  W  L N   L  LS E
Sbjct: 1   MVYFTERFLSGVRHLVILSDRNQPREDGLSLIVEKPWAGAFADHWPRLDNNSVLPRLSVE 60

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T+ K+ G++ F D YWEWL
Sbjct: 61  VPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVTKVPGEFCFTDCYWEWL 120

Query: 121 EFFVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMG 173
           E  VGRN ++L   RL   V ASLYTYD  +DVVRAFCE WCP TNTL T  G
Sbjct: 121 ELVVGRNTRLLYSTRLYGAVTASLYTYDRNSDVVRAFCEAWCPSTNTLHTMAG 173

[Close]

BLAST of Sed0017387 vs. ExPASy TrEMBL
Match: A0A5A7V4F4 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004890 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 3.9e-43
Identity = 89/173 (51.45%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 1   MVHFAERITSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ QL +DGLSL+ E+P A   +  W  L N   L  L  E
Sbjct: 16  MVYFTERFLSGVRHLVILSDRNQLREDGLSLIVEKPWAGAFADHWSRLDNNSVLPRLFVE 75

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T++K+ G++ F D YWEWL
Sbjct: 76  VPLSEEKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVIKVPGEFCFTDCYWEWL 135

Query: 121 EFFVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMG 173
           E  VG+N ++L    L   V ASLYTYD   DVVRAFCE WCP TNTL T  G
Sbjct: 136 ELVVGQNSRLLYSTHLYGTVTASLYTYDRNGDVVRAFCEAWCPSTNTLHTMAG 188

[Close]

BLAST of Sed0017387 vs. ExPASy TrEMBL
Match: A0A5D3BRA8 (PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00620 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 3.9e-43
Identity = 89/173 (51.45%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 1   MVHFAERITSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++LVIL D+ QL +DGLSL+ E+P A   +  W  L N   L  L  E
Sbjct: 16  MVYFTERFLSGVRHLVILSDRNQLREDGLSLIVEKPWAGAFADHWSRLDNNSVLPRLFVE 75

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T++K+ G++ F D YWEWL
Sbjct: 76  VPLSEEKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTVIKVPGEFCFTDCYWEWL 135

Query: 121 EFFVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMG 173
           E  VG+N ++L    L   V ASLYTYD   DVVRAFCE WCP TNTL T  G
Sbjct: 136 ELVVGQNSRLLYSTHLYGTVTASLYTYDRNGDVVRAFCEAWCPSTNTLHTMAG 188

[Close]

BLAST of Sed0017387 vs. ExPASy TrEMBL
Match: A0A5A7UV18 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003110 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.5e-42
Identity = 89/173 (51.45%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 1   MVHFAERITSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRE 60
           MV+F ER  SG+++L+IL +K Q  +DGLSL+ E+P A+  +  W  L N   L  LS E
Sbjct: 22  MVYFTERFLSGVRHLIILYNKNQPREDGLSLIVEKPWAAAFADHWPRLDNNSVLPRLSVE 81

Query: 61  LPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWSFIDFYWEWL 120
           +P      AWVL+SS+H    N    LTLG+RLIEG+T W T+ K+ G++ F D YWEWL
Sbjct: 82  IPLSEGKSAWVLQSSIHNEAPNSGRALTLGQRLIEGQTRWGTMTKVPGEFYFTDCYWEWL 141

Query: 121 EFFVGRNEKVLNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMG 173
           E  VGRN ++L   RL   V ASLYTYD  +DVVR FCE WCP TNTL T  G
Sbjct: 142 ELVVGRNTRLLYSTRLYGTVTASLYTYDRNSDVVRTFCEAWCPSTNTLHTMAG 194

The following BLAST results are available for this feature:

BLAST of Sed0017387 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061098.1	1.9e-44	53.18	putative mitochondrial protein [Cucumis melo var. makuwa] >TYK03768.1 putative m...	[more]
KAA0047478.1	2.1e-43	52.60	hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]	[more]
TYK02261.1	8.0e-43	51.45	hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]	[more]
KAA0060611.1	8.0e-43	51.45	hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]	[more]
TYK19639.1	3.0e-42	52.02	hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]	[more]

BLAST of Sed0017387 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0017387 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BXQ4	9.2e-45	53.18	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7TX42	1.0e-43	52.60	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7V4F4	3.9e-43	51.45	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3BRA8	3.9e-43	51.45	PMD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7UV18	1.5e-42	51.45	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Sed0017387 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36607:SF19	SUBFAMILY NOT NAMED	coord: 32..172
None	No IPR available	PANTHER	PTHR36607	1,2-DIHYDROXY-3-KETO-5-METHYLTHIOPENTENE DIOXYGENASE 4	coord: 32..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017387.1	Sed0017387.1	mRNA