Sed0017372 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCATAATCTCTCTCTAAAACCAATCTGAATCTCTGTCTTTTGTTCCTCTTTTTCACTGTTGATCGTCTGAATTACACTGAAAAAGCTGATCGGGATTCATGTCGGGTGCAACTCTTGCGGTGGCTCCACGAACGGAGGCCGATGAGGCGGTGGCGCCATCGAAGCTGCCACCGCGACATTCTACGGAGGAGAACACTGTGGTGGGAGGCGTGATGGGATCTCTACGCGTAATTGAACTTCAACTCGTTGCTTTCATCATGGTGTTCTCCGCGAGCGGGCTTGTCCCCATCGCCGACCTACTTTTCCCAGCGTTTACGTCTGCCTACCTATTTTTGCTGGCACGGTTTGCATTTCCATCCCACGACCACGCGCCGCACTCGACACGGGAGATCTTTCAGGCAAGGTCTCGGTAACGAACAACTATATTATATTTCCTTCGAACTCTGAACTAACAAATATATATTGATGTATTTTATGGATGTTGGATTTTTTTAGGGGAGCAAGTTGTTTAGGATGTACGTCATCGTGGGAACGACGATAGGGTTGTTCTTGCCGTTGGCGTACGTGTTGGGTGGATTTGCGAGGAGCGATGAGCATGCGGTTCGATCGGCAACTCCACATTTGTTTTTGTTGTCGTTTCAAATTCTCACCGAGAATGTCATAAGCGGGTTGTCGTTGTTCTCGCCTCCGGTAAGAGCGTTGGTGCCATTAATTTACACGATAAGAAGGATCTTTGTCATCATGGATTGGATGAATGATGTTTGGCTCAACAAAGTTCTGCCCGCAAATGCACCCTTCAAGGTATTTCTTTTCATCTTAATCAAAATTTCAATTTTTAGGATTTTCAGTATATAGCATTTATTTTTAAACTCTTAGAAATGTTGGGGAATTTAAGACACACGTAGGCCGTTTAGATGATTTTTTTTTTTTTTTTAAAACAAGGGTAACCACGCCCGTCCTTAGGCTAGGCTAGGCATCGGAAGCCGTTTAGATGATTATTTAAGTATAAGTTATACATTTAGTCTAGATGTGAAAAACTTATATAAAAAAAATAAAGATCAGTCAATGCTTGGATAAAAAAATAAAATAAAATTGGTCCCTTTAATGATTTTAAAAATTAGAAGAAAATCAAAATCTAGTCCCCTTGATGATTTTCAGAATTAAAATGTAGTTTTTTTTATTTATTTTTTGAAGTACAAGTCGGGGTAAAGATGCCACAAATCCTATAATTCAGTATTTAAGTCAAATATATGATTGTTGAGATTGAACTTGTGACGTATGAAACCGTCATACAACTCTATTCATCCGATATGAAAATTTAGTACTTATGATTAGATTTGATATAATGTCGTTGAATTAAGTAGGCATACACTATGCATACTGCAAAAGATGTTCTTATGTCCAATTAATCAAACTCATTTATATTGAATAACTCATTTTTACAAAAAATACGAATTTAATCTTTATAGTTCAATAAAATCTAAAAAAAATAGATGAACTATACAGATAAAATAATATAATTTTTGAAATAGTTTACATTTAACTTTGCCCAAAGAAAAATGGACCAACAAATTTTACCTGGGTTTCAAGAACTCCAAACAAAAAGAAAAAAGTTTTAAAAAATATATTGATTAAAATATTTTCTTAAAATGGGGAACTTTCAGTATAAAAAAATGTAGGTAGTTGTCAAACAAATCTTAATACATTCATGATTCAGCATCAGAATCAGAGCATAAATGAAAGTTTATTTGAAAAATATACGAAATGAGGAGTAGAAATCAAAATAACGTAAGAGGTTATGGAATTTGCAGGATGCAGCATGGTTTTGGTTCGGAAGAACGTTAGCAGTGACTAATTTTGTGTATTTCTGCATTAACTTATTTGGATTTTTAGTCCCAACATTCCTTCCAAGGGCATTTGAAAGGTATTTCGAGGACAGAAATCTTGAAACACATTCCAAATTTCAAGAAGATAAGCGCTCTACTTCTGCCGCTAAATCTCAGCCGTCCGATAAGAAGAAGTCCAACTGATTTTCTTTTCTTTTCATTTTTTTTTTTTAAACACTACGGTCTTTTTTTTTTATATGTATTATTATGTGAGTCTTTTATGTCCCC TCATAATCTCTCTCTAAAACCAATCTGAATCTCTGTCTTTTGTTCCTCTTTTTCACTGTTGATCGTCTGAATTACACTGAAAAAGCTGATCGGGATTCATGTCGGGTGCAACTCTTGCGGTGGCTCCACGAACGGAGGCCGATGAGGCGGTGGCGCCATCGAAGCTGCCACCGCGACATTCTACGGAGGAGAACACTGTGGTGGGAGGCGTGATGGGATCTCTACGCGTAATTGAACTTCAACTCGTTGCTTTCATCATGGTGTTCTCCGCGAGCGGGCTTGTCCCCATCGCCGACCTACTTTTCCCAGCGTTTACGTCTGCCTACCTATTTTTGCTGGCACGGTTTGCATTTCCATCCCACGACCACGCGCCGCACTCGACACGGGAGATCTTTCAGGGGAGCAAGTTGTTTAGGATGTACGTCATCGTGGGAACGACGATAGGGTTGTTCTTGCCGTTGGCGTACGTGTTGGGTGGATTTGCGAGGAGCGATGAGCATGCGGTTCGATCGGCAACTCCACATTTGTTTTTGTTGTCGTTTCAAATTCTCACCGAGAATGTCATAAGCGGGTTGTCGTTGTTCTCGCCTCCGGTAAGAGCGTTGGTGCCATTAATTTACACGATAAGAAGGATCTTTGTCATCATGGATTGGATGAATGATGTTTGGCTCAACAAAGTTCTGCCCGCAAATGCACCCTTCAAGGATGCAGCATGGTTTTGGTTCGGAAGAACGTTAGCAGTGACTAATTTTGTGTATTTCTGCATTAACTTATTTGGATTTTTAGTCCCAACATTCCTTCCAAGGGCATTTGAAAGGTATTTCGAGGACAGAAATCTTGAAACACATTCCAAATTTCAAGAAGATAAGCGCTCTACTTCTGCCGCTAAATCTCAGCCGTCCGATAAGAAGAAGTCCAACTGATTTTCTTTTCTTTTCATTTTTTTTTTTTAAACACTACGGTCTTTTTTTTTTATATGTATTATTATGTGAGTCTTTTATGTCCCC ATGTCGGGTGCAACTCTTGCGGTGGCTCCACGAACGGAGGCCGATGAGGCGGTGGCGCCATCGAAGCTGCCACCGCGACATTCTACGGAGGAGAACACTGTGGTGGGAGGCGTGATGGGATCTCTACGCGTAATTGAACTTCAACTCGTTGCTTTCATCATGGTGTTCTCCGCGAGCGGGCTTGTCCCCATCGCCGACCTACTTTTCCCAGCGTTTACGTCTGCCTACCTATTTTTGCTGGCACGGTTTGCATTTCCATCCCACGACCACGCGCCGCACTCGACACGGGAGATCTTTCAGGGGAGCAAGTTGTTTAGGATGTACGTCATCGTGGGAACGACGATAGGGTTGTTCTTGCCGTTGGCGTACGTGTTGGGTGGATTTGCGAGGAGCGATGAGCATGCGGTTCGATCGGCAACTCCACATTTGTTTTTGTTGTCGTTTCAAATTCTCACCGAGAATGTCATAAGCGGGTTGTCGTTGTTCTCGCCTCCGGTAAGAGCGTTGGTGCCATTAATTTACACGATAAGAAGGATCTTTGTCATCATGGATTGGATGAATGATGTTTGGCTCAACAAAGTTCTGCCCGCAAATGCACCCTTCAAGGATGCAGCATGGTTTTGGTTCGGAAGAACGTTAGCAGTGACTAATTTTGTGTATTTCTGCATTAACTTATTTGGATTTTTAGTCCCAACATTCCTTCCAAGGGCATTTGAAAGGTATTTCGAGGACAGAAATCTTGAAACACATTCCAAATTTCAAGAAGATAAGCGCTCTACTTCTGCCGCTAAATCTCAGCCGTCCGATAAGAAGAAGTCCAACTGA MSGATLAVAPRTEADEAVAPSKLPPRHSTEENTVVGGVMGSLRVIELQLVAFIMVFSASGLVPIADLLFPAFTSAYLFLLARFAFPSHDHAPHSTREIFQGSKLFRMYVIVGTTIGLFLPLAYVLGGFARSDEHAVRSATPHLFLLSFQILTENVISGLSLFSPPVRALVPLIYTIRRIFVIMDWMNDVWLNKVLPANAPFKDAAWFWFGRTLAVTNFVYFCINLFGFLVPTFLPRAFERYFEDRNLETHSKFQEDKRSTSAAKSQPSDKKKSN Homology
BLAST of Sed0017372 vs. NCBI nr
Match: XP_023550142.1 (uncharacterized protein LOC111808420 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 434.9 bits (1117), Expect = 5.2e-118 Identity = 222/272 (81.62%), Postives = 243/272 (89.34%), Query Frame = 0
BLAST of Sed0017372 vs. NCBI nr
Match: XP_038875679.1 (uncharacterized protein LOC120068074 [Benincasa hispida]) HSP 1 Score: 433.7 bits (1114), Expect = 1.2e-117 Identity = 227/276 (82.25%), Postives = 245/276 (88.77%), Query Frame = 0
BLAST of Sed0017372 vs. NCBI nr
Match: XP_022954375.1 (uncharacterized protein LOC111456631 [Cucurbita moschata]) HSP 1 Score: 433.3 bits (1113), Expect = 1.5e-117 Identity = 221/272 (81.25%), Postives = 242/272 (88.97%), Query Frame = 0
BLAST of Sed0017372 vs. NCBI nr
Match: KAG6576125.1 (hypothetical protein SDJN03_26764, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 431.4 bits (1108), Expect = 5.8e-117 Identity = 219/272 (80.51%), Postives = 242/272 (88.97%), Query Frame = 0
BLAST of Sed0017372 vs. NCBI nr
Match: KAG7014643.1 (hypothetical protein SDJN02_24822, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 427.2 bits (1097), Expect = 1.1e-115 Identity = 220/276 (79.71%), Postives = 242/276 (87.68%), Query Frame = 0
BLAST of Sed0017372 vs. ExPASy TrEMBL
Match: A0A6J1GS90 (uncharacterized protein LOC111456631 OS=Cucurbita moschata OX=3662 GN=LOC111456631 PE=4 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 7.4e-118 Identity = 221/272 (81.25%), Postives = 242/272 (88.97%), Query Frame = 0
BLAST of Sed0017372 vs. ExPASy TrEMBL
Match: A0A6J1JUQ0 (uncharacterized protein LOC111488027 OS=Cucurbita maxima OX=3661 GN=LOC111488027 PE=4 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 2.2e-114 Identity = 219/273 (80.22%), Postives = 239/273 (87.55%), Query Frame = 0
BLAST of Sed0017372 vs. ExPASy TrEMBL
Match: A0A1S3CB68 (uncharacterized protein LOC103498861 OS=Cucumis melo OX=3656 GN=LOC103498861 PE=4 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 2.9e-114 Identity = 220/280 (78.57%), Postives = 240/280 (85.71%), Query Frame = 0
BLAST of Sed0017372 vs. ExPASy TrEMBL
Match: A0A5D3DMD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002220 PE=4 SV=1) HSP 1 Score: 418.3 bits (1074), Expect = 2.5e-113 Identity = 219/280 (78.21%), Postives = 239/280 (85.36%), Query Frame = 0
BLAST of Sed0017372 vs. ExPASy TrEMBL
Match: A0A0A0KAF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G094170 PE=4 SV=1) HSP 1 Score: 414.8 bits (1065), Expect = 2.7e-112 Identity = 216/281 (76.87%), Postives = 236/281 (83.99%), Query Frame = 0
BLAST of Sed0017372 vs. TAIR 10
Match: AT1G27990.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits to 86 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 315.8 bits (808), Expect = 3.3e-86 Identity = 179/273 (65.57%), Postives = 207/273 (75.82%), Query Frame = 0
BLAST of Sed0017372 vs. TAIR 10
Match: AT5G52420.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 137.9 bits (346), Expect = 1.2e-32 Identity = 76/231 (32.90%), Postives = 121/231 (52.38%), Query Frame = 0
BLAST of Sed0017372 vs. TAIR 10
Match: AT5G23920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 113.6 bits (283), Expect = 2.5e-25 Identity = 82/234 (35.04%), Postives = 118/234 (50.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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