Sed0017347 (gene) Chayote v1

Overview
NameSed0017347
Typegene
OrganismSechium edule (Chayote v1)
DescriptionRING-type domain-containing protein
LocationLG12: 9873567 .. 9874496 (+)
RNA-Seq ExpressionSed0017347
SyntenySed0017347
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGGAAAACATTTGCTGTCTCCAACCACACCATTTTCCCCCTCCTCCTCCCATTTTCTGTGTAAATCAAAATCCATAACAGAAATTCCCCCATTTATAAGACCCCATTTCATAGTCTCACCTTTCGCCGCCGTCCTCGATTTCTGTTCTCCGGCATCTGTTAGGGGTATTTTCTCTTCCGATTATGCAGCGGGTGAGCAAAAGCGTCCGGTTGGCGGAGGTAGCCGGCGGGACAACGGCGGAGTGCGCCGCCGTGTGCTGCTGCGGTCCTTGCATCGTGATCGAGTTCCTGGTGCTGGCCATTTACAAGGTGCCGGCGGGGCTGTGCCGGCGGGCGTGGAGGAGGAAGCGGCGGCGGCAGAGGATGAAGATGAAGATGAAGAAGAAAGGGCGGTGGTCTCCCGGGGAGTACGACGAGACGGATATTCAGATACTCTCCGCCGGAAGAAACCTGTACTCGTCGGAACGGAAAGCAGAAATGTCCGACGAGACGGAGAGGAAAGTGATGGAACTGGAAAAGGAGATGTGGGGGATTTTTTACAATACTGGATTCTGGAGAAGCCCTTCCCGGAGACAAGATCTAATTTCAAATTAACCCTTTTCCTTTTCCAAATCTATGGATTCATTCTCTCCACATTTTCCCGGAAAAGCAAAATTTCCGCCATTGTCTTCTTCGTTCTGTTCTGCTCTGTTCTGTTCTGTGTGTGTTTGAATTTGATTCGATCATCATTTGGAAACGGTGGCGTTTGTTTTTTGGGGGCCATATTTCATGGTGTTTGGCTTCCGGGATAATATTCTACTTTCTCCTTTCCTTTAATTATTACCTACGTTTACATAATTATAAAGATATTGCCATAAATTTCAAATAAAATAAAATAAAGATATTGCTATAACTTTATTCAATTTATAGGGAATTAATGTCATTCACAAC

mRNA sequence

TTGGAAAACATTTGCTGTCTCCAACCACACCATTTTCCCCCTCCTCCTCCCATTTTCTGTGTAAATCAAAATCCATAACAGAAATTCCCCCATTTATAAGACCCCATTTCATAGTCTCACCTTTCGCCGCCGTCCTCGATTTCTGTTCTCCGGCATCTGTTAGGGGTATTTTCTCTTCCGATTATGCAGCGGGTGAGCAAAAGCGTCCGGTTGGCGGAGGTAGCCGGCGGGACAACGGCGGAGTGCGCCGCCGTGTGCTGCTGCGGTCCTTGCATCGTGATCGAGTTCCTGGTGCTGGCCATTTACAAGGTGCCGGCGGGGCTGTGCCGGCGGGCGTGGAGGAGGAAGCGGCGGCGGCAGAGGATGAAGATGAAGATGAAGAAGAAAGGGCGGTGGTCTCCCGGGGAGTACGACGAGACGGATATTCAGATACTCTCCGCCGGAAGAAACCTGTACTCGTCGGAACGGAAAGCAGAAATGTCCGACGAGACGGAGAGGAAAGTGATGGAACTGGAAAAGGAGATGTGGGGGATTTTTTACAATACTGGATTCTGGAGAAGCCCTTCCCGGAGACAAGATCTAATTTCAAATTAACCCTTTTCCTTTTCCAAATCTATGGATTCATTCTCTCCACATTTTCCCGGAAAAGCAAAATTTCCGCCATTGTCTTCTTCGTTCTGTTCTGCTCTGTTCTGTTCTGTGTGTGTTTGAATTTGATTCGATCATCATTTGGAAACGGTGGCGTTTGTTTTTTGGGGGCCATATTTCATGGTGTTTGGCTTCCGGGATAATATTCTACTTTCTCCTTTCCTTTAATTATTACCTACGTTTACATAATTATAAAGATATTGCCATAAATTTCAAATAAAATAAAATAAAGATATTGCTATAACTTTATTCAATTTATAGGGAATTAATGTCATTCACAAC

Coding sequence (CDS)

ATGCAGCGGGTGAGCAAAAGCGTCCGGTTGGCGGAGGTAGCCGGCGGGACAACGGCGGAGTGCGCCGCCGTGTGCTGCTGCGGTCCTTGCATCGTGATCGAGTTCCTGGTGCTGGCCATTTACAAGGTGCCGGCGGGGCTGTGCCGGCGGGCGTGGAGGAGGAAGCGGCGGCGGCAGAGGATGAAGATGAAGATGAAGAAGAAAGGGCGGTGGTCTCCCGGGGAGTACGACGAGACGGATATTCAGATACTCTCCGCCGGAAGAAACCTGTACTCGTCGGAACGGAAAGCAGAAATGTCCGACGAGACGGAGAGGAAAGTGATGGAACTGGAAAAGGAGATGTGGGGGATTTTTTACAATACTGGATTCTGGAGAAGCCCTTCCCGGAGACAAGATCTAATTTCAAATTAA

Protein sequence

MQRVSKSVRLAEVAGGTTAECAAVCCCGPCIVIEFLVLAIYKVPAGLCRRAWRRKRRRQRMKMKMKKKGRWSPGEYDETDIQILSAGRNLYSSERKAEMSDETERKVMELEKEMWGIFYNTGFWRSPSRRQDLISN
Homology
BLAST of Sed0017347 vs. NCBI nr
Match: KAA0043783.1 (uncharacterized protein E6C27_scaffold236G001150 [Cucumis melo var. makuwa] >TYK25350.1 uncharacterized protein E5676_scaffold352G004890 [Cucumis melo var. makuwa])

HSP 1 Score: 184.9 bits (468), Expect = 4.7e-43
Identity = 98/129 (75.97%), Postives = 110/129 (85.27%), Query Frame = 0

Query: 5   SKSVRLAEVAGGTTAECAAVCCCGPCIVIEFLVLAIYKVPAGLCRRAWRRKRRRQRMKMK 64
           S SVR AEVAGGTTAECAAVCCC PC+VI FLVLAIYKVPAGLCRRA R K RRQR+K K
Sbjct: 25  SGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKVPAGLCRRALRTK-RRQRLKKK 84

Query: 65  ---MKKKGRWSPGEYDETDIQILSAGRNLYSSERKAEMSDETERKVMELEKEMWGIFYNT 124
                ++GR+S G YDETDIQILSAG++LYSSE + + ++ETERKVMELEKEMW IFY+T
Sbjct: 85  GVIPARRGRYSYGGYDETDIQILSAGKSLYSSEPRGQQAEETERKVMELEKEMWEIFYST 144

Query: 125 GFWRSPSRR 131
           GFWRSPSRR
Sbjct: 145 GFWRSPSRR 152

BLAST of Sed0017347 vs. NCBI nr
Match: XP_038905288.1 (uncharacterized protein LOC120091362 [Benincasa hispida])

HSP 1 Score: 180.6 bits (457), Expect = 8.8e-42
Identity = 96/135 (71.11%), Postives = 110/135 (81.48%), Query Frame = 0

Query: 4   VSKSVRLAEVAGGTTAECAAVCCCGPCIVIEFLVLAIYKVPAGLCRRAWRRKRRRQRMKM 63
           VS SVR AEVAGGTTAECAAVCCC PC+V+ FLVLAIYKVPAGLCRRA R K RRQR+K 
Sbjct: 24  VSGSVRFAEVAGGTTAECAAVCCCCPCVVLNFLVLAIYKVPAGLCRRALRTK-RRQRLKK 83

Query: 64  K---MKKKGRWSPGEYDETDIQILSAGRNLYSSERKAEMSDETERKVMELEKEMWGIFYN 123
           K     ++ R+S G YDETDIQILS G+ +YSSE K + S+ETER+VMELEKEMW IFY+
Sbjct: 84  KGAIPARRTRFSGGGYDETDIQILSIGKTVYSSEPKGQKSEETERRVMELEKEMWEIFYS 143

Query: 124 TGFWRSPSRRQDLIS 136
           TGFWRSPS+R  + S
Sbjct: 144 TGFWRSPSQRDQISS 157

BLAST of Sed0017347 vs. NCBI nr
Match: XP_011652052.1 (uncharacterized protein LOC105434984 [Cucumis sativus] >KGN59241.1 hypothetical protein Csa_001735 [Cucumis sativus])

HSP 1 Score: 179.5 bits (454), Expect = 2.0e-41
Identity = 97/129 (75.19%), Postives = 108/129 (83.72%), Query Frame = 0

Query: 5   SKSVRLAEVAGGTTAECAAVCCCGPCIVIEFLVLAIYKVPAGLCRRAWRRKRRRQRMKMK 64
           S SVR AEVAGGTTAECAAVCCC PC+VI FLVLAIYKVPAGLCRRA R K RRQR+K K
Sbjct: 25  SGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKVPAGLCRRALRTK-RRQRLKKK 84

Query: 65  ---MKKKGRWSPGEYDETDIQILSAGRNLYSSERKAEMSDETERKVMELEKEMWGIFYNT 124
                ++GR+S G YDETDIQILSAG+ +YSSE + + + ETERKVMELEKEMW IFY+T
Sbjct: 85  GVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQQAVETERKVMELEKEMWEIFYST 144

Query: 125 GFWRSPSRR 131
           GFWRSPSRR
Sbjct: 145 GFWRSPSRR 152

BLAST of Sed0017347 vs. NCBI nr
Match: XP_016899649.1 (PREDICTED: uncharacterized protein LOC103486710 [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 3.4e-41
Identity = 95/126 (75.40%), Postives = 104/126 (82.54%), Query Frame = 0

Query: 5   SKSVRLAEVAGGTTAECAAVCCCGPCIVIEFLVLAIYKVPAGLCRRAWRRKRRRQRMKMK 64
           S SVR AEVAGGTTAECAAVCCC PC+VI FLVLAIYKVPAGLCRRA R K RRQR+K K
Sbjct: 25  SGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKVPAGLCRRALRTK-RRQRLKKK 84

Query: 65  MKKKGRWSPGEYDETDIQILSAGRNLYSSERKAEMSDETERKVMELEKEMWGIFYNTGFW 124
                    G YDETDIQILSAG++LYSSE + + ++ETERKVMELEKEMW IFY+TGFW
Sbjct: 85  --------DGGYDETDIQILSAGKSLYSSEPRGQQAEETERKVMELEKEMWEIFYSTGFW 141

Query: 125 RSPSRR 131
           RSPSRR
Sbjct: 145 RSPSRR 141

BLAST of Sed0017347 vs. NCBI nr
Match: XP_022955715.1 (uncharacterized protein LOC111457605 [Cucurbita moschata] >KAG6571296.1 hypothetical protein SDJN03_30211, partial [Cucurbita argyrosperma subsp. sororia] >KAG6596639.1 hypothetical protein SDJN03_09819, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028178.1 hypothetical protein SDJN02_09358, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.2 bits (409), Expect = 3.2e-36
Identity = 83/128 (64.84%), Postives = 98/128 (76.56%), Query Frame = 0

Query: 7   SVRLAEVAGGTTAECAAVCCCGPCIVIEFLVLAIYKVPAGLCRRAWRRKRRRQRMKMKM- 66
           S+R AEVAGGTTAECAAVCCC PC V+ FLVLAIYKVPAGLCRRA R +RR    K  + 
Sbjct: 27  SLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLP 86

Query: 67  KKKGRWSPGEYDETDIQILSAGRNLYSSERKAEMSDETERKVMELEKEMWGIFYNTGFWR 126
            ++GR S   YDE D+QIL+ G+ +++SE K + SDETERKVMELE EMW  FY TGFWR
Sbjct: 87  SRRGRCSACSYDEADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWR 146

Query: 127 SPSRRQDL 134
           SPS+R  +
Sbjct: 147 SPSQRDQI 154

BLAST of Sed0017347 vs. ExPASy TrEMBL
Match: A0A5D3DQ13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004890 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.3e-43
Identity = 98/129 (75.97%), Postives = 110/129 (85.27%), Query Frame = 0

Query: 5   SKSVRLAEVAGGTTAECAAVCCCGPCIVIEFLVLAIYKVPAGLCRRAWRRKRRRQRMKMK 64
           S SVR AEVAGGTTAECAAVCCC PC+VI FLVLAIYKVPAGLCRRA R K RRQR+K K
Sbjct: 25  SGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKVPAGLCRRALRTK-RRQRLKKK 84

Query: 65  ---MKKKGRWSPGEYDETDIQILSAGRNLYSSERKAEMSDETERKVMELEKEMWGIFYNT 124
                ++GR+S G YDETDIQILSAG++LYSSE + + ++ETERKVMELEKEMW IFY+T
Sbjct: 85  GVIPARRGRYSYGGYDETDIQILSAGKSLYSSEPRGQQAEETERKVMELEKEMWEIFYST 144

Query: 125 GFWRSPSRR 131
           GFWRSPSRR
Sbjct: 145 GFWRSPSRR 152

BLAST of Sed0017347 vs. ExPASy TrEMBL
Match: A0A0A0LGV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G784360 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 9.5e-42
Identity = 97/129 (75.19%), Postives = 108/129 (83.72%), Query Frame = 0

Query: 5   SKSVRLAEVAGGTTAECAAVCCCGPCIVIEFLVLAIYKVPAGLCRRAWRRKRRRQRMKMK 64
           S SVR AEVAGGTTAECAAVCCC PC+VI FLVLAIYKVPAGLCRRA R K RRQR+K K
Sbjct: 25  SGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKVPAGLCRRALRTK-RRQRLKKK 84

Query: 65  ---MKKKGRWSPGEYDETDIQILSAGRNLYSSERKAEMSDETERKVMELEKEMWGIFYNT 124
                ++GR+S G YDETDIQILSAG+ +YSSE + + + ETERKVMELEKEMW IFY+T
Sbjct: 85  GVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPRGQQAVETERKVMELEKEMWEIFYST 144

Query: 125 GFWRSPSRR 131
           GFWRSPSRR
Sbjct: 145 GFWRSPSRR 152

BLAST of Sed0017347 vs. ExPASy TrEMBL
Match: A0A1S4DUJ2 (uncharacterized protein LOC103486710 OS=Cucumis melo OX=3656 GN=LOC103486710 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.6e-41
Identity = 95/126 (75.40%), Postives = 104/126 (82.54%), Query Frame = 0

Query: 5   SKSVRLAEVAGGTTAECAAVCCCGPCIVIEFLVLAIYKVPAGLCRRAWRRKRRRQRMKMK 64
           S SVR AEVAGGTTAECAAVCCC PC+VI FLVLAIYKVPAGLCRRA R K RRQR+K K
Sbjct: 25  SGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVLAIYKVPAGLCRRALRTK-RRQRLKKK 84

Query: 65  MKKKGRWSPGEYDETDIQILSAGRNLYSSERKAEMSDETERKVMELEKEMWGIFYNTGFW 124
                    G YDETDIQILSAG++LYSSE + + ++ETERKVMELEKEMW IFY+TGFW
Sbjct: 85  --------DGGYDETDIQILSAGKSLYSSEPRGQQAEETERKVMELEKEMWEIFYSTGFW 141

Query: 125 RSPSRR 131
           RSPSRR
Sbjct: 145 RSPSRR 141

BLAST of Sed0017347 vs. ExPASy TrEMBL
Match: A0A6J1GVU4 (uncharacterized protein LOC111457605 OS=Cucurbita moschata OX=3662 GN=LOC111457605 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.6e-36
Identity = 83/128 (64.84%), Postives = 98/128 (76.56%), Query Frame = 0

Query: 7   SVRLAEVAGGTTAECAAVCCCGPCIVIEFLVLAIYKVPAGLCRRAWRRKRRRQRMKMKM- 66
           S+R AEVAGGTTAECAAVCCC PC V+ FLVLAIYKVPAGLCRRA R +RR    K  + 
Sbjct: 27  SLRFAEVAGGTTAECAAVCCCCPCFVLHFLVLAIYKVPAGLCRRALRTRRRHSLRKGTLP 86

Query: 67  KKKGRWSPGEYDETDIQILSAGRNLYSSERKAEMSDETERKVMELEKEMWGIFYNTGFWR 126
            ++GR S   YDE D+QIL+ G+ +++SE K + SDETERKVMELE EMW  FY TGFWR
Sbjct: 87  SRRGRCSACSYDEADLQILTGGKAMHASELKGKKSDETERKVMELETEMWETFYGTGFWR 146

Query: 127 SPSRRQDL 134
           SPS+R  +
Sbjct: 147 SPSQRDQI 154

BLAST of Sed0017347 vs. ExPASy TrEMBL
Match: A0A6J1J6H8 (uncharacterized protein LOC111481788 OS=Cucurbita maxima OX=3661 GN=LOC111481788 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.4e-31
Identity = 77/136 (56.62%), Postives = 96/136 (70.59%), Query Frame = 0

Query: 4   VSKSVRLAEVAGGTTAECAAVCCCGPCIVIEFLVLAIYKVPAGLCRRAWRRKRRRQRMKM 63
           VS +VR AEVAGGTTAECAAV CC PCI + FLVLAIYK+PAGLCRRA R K R+   K 
Sbjct: 24  VSSTVRFAEVAGGTTAECAAVFCCCPCIAVNFLVLAIYKLPAGLCRRALRTKHRQNVKKK 83

Query: 64  K---MKKKGRWSPGEYDETDIQILSAGRNLYSSERKAEMSDETERKVMELEKEMWGIFYN 123
           K     + GR+  G  D+ D+Q+++  + +Y        S+E ERKV+ELEKEMW +FYN
Sbjct: 84  KGIHPARLGRFPGGILDDADVQVITMEKTVY--------SEEAERKVVELEKEMWEVFYN 143

Query: 124 TGFWRSPSRRQDLISN 137
           TGFWRSPS+R  + S+
Sbjct: 144 TGFWRSPSQRDQISSS 151

BLAST of Sed0017347 vs. TAIR 10
Match: AT3G11690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast hits to 84 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.2 bits (243), Expect = 5.4e-21
Identity = 61/151 (40.40%), Postives = 82/151 (54.30%), Query Frame = 0

Query: 11  AEVAGGTTAECAAVCCCGPCIVIEFLVLAIYKVPAGLCRRAWRRKRRRQRMKM------- 70
           AE  GGTTA CAAV CC PC ++  LVLAIYKVP G+CRRA R +RR+Q +K        
Sbjct: 55  AEFCGGTTASCAAVWCCCPCGLVNLLVLAIYKVPKGICRRAIRSRRRKQLVKNGILPPLP 114

Query: 71  ---KMKKKGR----------------WSPGEYDETDIQILSAGRNLYSSERKAEMSDETE 130
              K ++  R                 S  E D+  + +   G+++ +     E +DE +
Sbjct: 115 TDGKNERMQRVFQNSEFAIHPLDSDDVSDDEDDDNFLDLKYIGKSVATGFTTEEETDEDD 174

Query: 131 RKVMELEKEMWGIFYNTGFWRSPSRRQDLIS 136
             V+ LEKEMW  FY  GFWRSPS+R+ + S
Sbjct: 175 EAVLALEKEMWNRFYGAGFWRSPSQRESVSS 205

BLAST of Sed0017347 vs. TAIR 10
Match: AT5G06380.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-19
Identity = 54/122 (44.26%), Postives = 73/122 (59.84%), Query Frame = 0

Query: 11  AEVAGGTTAECAAVCCCGPCIVIEFLVLAIYKVPAGLCRRAWRRKRRRQRMKMKMKKKGR 70
           AE  GGTTA CAA+C C PC V+  +VLA+YK+P GLCRRA RR RR++  K +  + GR
Sbjct: 24  AECCGGTTASCAALCLCAPCSVVNLVVLAVYKLPRGLCRRAIRRIRRKRLAKKEFVESGR 83

Query: 71  -WSPGEYDETDIQILSAGRNLYSSERKAEMSDETERKVMELEKEMWGIFYNTGFWRSPSR 130
            +  G   +  +  L        S  + E  +E +  V+ LEKEMW  FY+ GFWRS S+
Sbjct: 84  EFGRGGSSQFAVHPL-------ESRDEEEEEEEEDEAVIALEKEMWSRFYSGGFWRSLSQ 138

Query: 131 RQ 132
            +
Sbjct: 144 AE 138

BLAST of Sed0017347 vs. TAIR 10
Match: AT2G27180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 99 Blast hits to 99 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 3.6e-17
Identity = 51/124 (41.13%), Postives = 70/124 (56.45%), Query Frame = 0

Query: 9   RLAEVAGGTTAECAAVCCCGPCIVIEFLVLAIYKVPAGLCRRAWRRKRRRQRMKMKMKKK 68
           ++ EVAGG  AECAAV CC PC V+  +VLA+YKVPA +C++AWRR +RR R   K    
Sbjct: 36  KVGEVAGGAAAECAAVWCCCPCAVVNLMVLAVYKVPAAVCKKAWRRSKRR-RFTRKRHGL 95

Query: 69  GRWSPGEYDETDIQILSAGRNLYSS--ERKAEMSDETERKVMELEKEMWGIFYNTGFWRS 128
              +  E  E+ +       +L +     +  +S      V+ LE EM   FY  GFWRS
Sbjct: 96  LASATAEGSESTVHARLNEEDLTAEIVFEECHVSGGELNDVVRLENEMLDRFYGAGFWRS 155

Query: 129 PSRR 131
           PS++
Sbjct: 156 PSQK 158

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0043783.14.7e-4375.97uncharacterized protein E6C27_scaffold236G001150 [Cucumis melo var. makuwa] >TYK... [more]
XP_038905288.18.8e-4271.11uncharacterized protein LOC120091362 [Benincasa hispida][more]
XP_011652052.12.0e-4175.19uncharacterized protein LOC105434984 [Cucumis sativus] >KGN59241.1 hypothetical ... [more]
XP_016899649.13.4e-4175.40PREDICTED: uncharacterized protein LOC103486710 [Cucumis melo][more]
XP_022955715.13.2e-3664.84uncharacterized protein LOC111457605 [Cucurbita moschata] >KAG6571296.1 hypothet... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DQ132.3e-4375.97Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LGV09.5e-4275.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G784360 PE=4 SV=1[more]
A0A1S4DUJ21.6e-4175.40uncharacterized protein LOC103486710 OS=Cucumis melo OX=3656 GN=LOC103486710 PE=... [more]
A0A6J1GVU41.6e-3664.84uncharacterized protein LOC111457605 OS=Cucurbita moschata OX=3662 GN=LOC1114576... [more]
A0A6J1J6H83.4e-3156.62uncharacterized protein LOC111481788 OS=Cucurbita maxima OX=3661 GN=LOC111481788... [more]
Match NameE-valueIdentityDescription
AT3G11690.15.4e-2140.40unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G06380.11.7e-1944.26unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G27180.13.6e-1741.13unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..113
NoneNo IPR availablePANTHERPTHR33264EXPRESSED PROTEINcoord: 4..132
NoneNo IPR availablePANTHERPTHR33264:SF36SUBFAMILY NOT NAMEDcoord: 4..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0017347.1Sed0017347.1mRNA