Sed0017290 (gene) Chayote v1

Overview


Name	Sed0017290
Type	gene
Organism	Sechium edule (Chayote v1)
Description	zinc finger protein 830-like isoform X3
Location	LG11: 4389959 .. 4391353 (-)
RNA-Seq Expression	Sed0017290
Synteny	Sed0017290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCAGGAAACACCCAATCCAGAGGTATTTACAGAAAATCAGAAGGTCAAGACGCCATCGGTATTCACCTTTGGTGTGAAGAAAAACCCCAAAGACAAACGGAGTTGTGCAGATCTAAAGGCTCGAAACATTTCCCAGGCTGCATCCAAGCAATTATCGAGCAAAAAGGGAAAGCTACTCAAAGTCACCGAATTGGCTGGTTCTGTAGGTGCAAAAGAAAAGGAGTCAGAAGTCGGAGAAACTCTTCAATGTGTGAAAACGGAAGGTAGTTTTATTCAGCATCCAATAGTTCCAAACTTTCTAAAATTTGCTGCCAAAGAGGATAAGCAACCGAATGAGTTGGGGATTGAGCTGCCACACGAAAACCCTAATCCGTATATAGTTAGAGAAAAGCAGAAGGTTGAGACGCTATCAGCATCCACCTTTGGTATTAAATCATTTGGTGGGAAGAAAGATCCCAAGGAAGAGTGGAGTTGTGATCTGTGTCAACTAACCATGTGGACCGAAATGCATTATAGTGAACACCTTTATGGCAAGAGACACAAGCGGAAAGAAGCAGATCTGAGGGCTCGAATGCTTAGCAATGTTTCCCGGGCTGCAACCGAGCCAGTATCGAACAAAAGGAGAAAGCTACGCAAAGTCACCGAGGCATATGGCTCTGCAGGTGCAAAAGAAAAGGAGTCAAAAGTTGGAGAAACTCTTCAATGTGAGAAAACAGAAGGTAGTTTTAAACTGAATGCTACAGTTTCAAACTTTTTGAAATTAGCTGTCAAAGAGGATAAGCAACAGAACGAGTTGGTGATTGAGCCGCTACTGGGAGAATCCAGTCCAAACGTATTTAGAGAAAAGCAGAAGGCCGAGGCGCCATTGGTATCGGTTGAAATCCAATCATCTGGTGTAAAGAAAAATCCCAAGGAGTGGAGCTGTGTACGATGTCAAGTAACCGTGCCGAGCGAAAAGATTTTTAATGAACACCTTCATGGCAAGAAGCACAAGCGCAATTTGACAATGCGACTGCAGGAGAAACCCAATCCTAGAGAAAATCTGAAGGTCAAGATGCCATTGGCATCCATCATCAATATTCAACCATTTGATGTGAAGAAAAAGAACAGGTGGACTTGTGCACTGTGTCAAGTTGCATCTGTGGCGAATAAAAAAGCATTAGATCAACACATTCGTGGATGGAGGCACAGGCGCAAAGAAGCTCTTCTGGGGGCTCGAAAGGAAAGCAATGTTTTAGAGGCTGCAACCGATCCAGTAACGAACGAAAGGAGAAACCTACTCGAAGTGACCGAGGCATCTGGCTCTGCAGGTACAGAAAAAAAGGAGCCAAAAGATGTAGAAACTGTTAAATGTGAGAAAACTGAAGTTATTTTTATTGACCTGACTTAG

mRNA sequence

ATGCTGCAGGAAACACCCAATCCAGAGGTATTTACAGAAAATCAGAAGGTCAAGACGCCATCGGTATTCACCTTTGGTGTGAAGAAAAACCCCAAAGACAAACGGAGTTGTGCAGATCTAAAGGCTCGAAACATTTCCCAGGCTGCATCCAAGCAATTATCGAGCAAAAAGGGAAAGCTACTCAAAGTCACCGAATTGGCTGGTTCTGTAGGTGCAAAAGAAAAGGAGTCAGAAGTCGGAGAAACTCTTCAATGTGTGAAAACGGAAGGTAGTTTTATTCAGCATCCAATAGTTCCAAACTTTCTAAAATTTGCTGCCAAAGAGGATAAGCAACCGAATGAGTTGGGGATTGAGCTGCCACACGAAAACCCTAATCCGTATATAGTTAGAGAAAAGCAGAAGGTTGAGACGCTATCAGCATCCACCTTTGGTATTAAATCATTTGGTGGGAAGAAAGATCCCAAGGAAGAGTGGAGTTGTGATCTGTGTCAACTAACCATGTGGACCGAAATGCATTATAGTGAACACCTTTATGGCAAGAGACACAAGCGGAAAGAAGCAGATCTGAGGGCTCGAATGCTTAGCAATGTTTCCCGGGCTGCAACCGAGCCAGTATCGAACAAAAGGAGAAAGCTACGCAAAGTCACCGAGGCATATGGCTCTGCAGGTGCAAAAGAAAAGGAGTCAAAAGTTGGAGAAACTCTTCAATGTGAGAAAACAGAAGGTAGTTTTAAACTGAATGCTACAGTTTCAAACTTTTTGAAATTAGCTGTCAAAGAGGATAAGCAACAGAACGAGTTGGTGATTGAGCCGCTACTGGGAGAATCCAGTCCAAACGTATTTAGAGAAAAGCAGAAGGCCGAGGCGCCATTGGTATCGGTTGAAATCCAATCATCTGGTGTAAAGAAAAATCCCAAGGAGTGGAGCTGTGTACGATGTCAAGTAACCGTGCCGAGCGAAAAGATTTTTAATGAACACCTTCATGGCAAGAAGCACAAGCGCAATTTGACAATGCGACTGCAGGAGAAACCCAATCCTAGAGAAAATCTGAAGGTCAAGATGCCATTGGCATCCATCATCAATATTCAACCATTTGATGTGAAGAAAAAGAACAGGTGGACTTGTGCACTGTGTCAAGTTGCATCTGTGGCGAATAAAAAAGCATTAGATCAACACATTCGTGGATGGAGGCACAGGCGCAAAGAAGCTCTTCTGGGGGCTCGAAAGGAAAGCAATGTTTTAGAGGCTGCAACCGATCCAGTAACGAACGAAAGGAGAAACCTACTCGAAGTGACCGAGGCATCTGGCTCTGCAGGTACAGAAAAAAAGGAGCCAAAAGATGTAGAAACTGTTAAATGTGAGAAAACTGAAGTTATTTTTATTGACCTGACTTAG

Coding sequence (CDS)

ATGCTGCAGGAAACACCCAATCCAGAGGTATTTACAGAAAATCAGAAGGTCAAGACGCCATCGGTATTCACCTTTGGTGTGAAGAAAAACCCCAAAGACAAACGGAGTTGTGCAGATCTAAAGGCTCGAAACATTTCCCAGGCTGCATCCAAGCAATTATCGAGCAAAAAGGGAAAGCTACTCAAAGTCACCGAATTGGCTGGTTCTGTAGGTGCAAAAGAAAAGGAGTCAGAAGTCGGAGAAACTCTTCAATGTGTGAAAACGGAAGGTAGTTTTATTCAGCATCCAATAGTTCCAAACTTTCTAAAATTTGCTGCCAAAGAGGATAAGCAACCGAATGAGTTGGGGATTGAGCTGCCACACGAAAACCCTAATCCGTATATAGTTAGAGAAAAGCAGAAGGTTGAGACGCTATCAGCATCCACCTTTGGTATTAAATCATTTGGTGGGAAGAAAGATCCCAAGGAAGAGTGGAGTTGTGATCTGTGTCAACTAACCATGTGGACCGAAATGCATTATAGTGAACACCTTTATGGCAAGAGACACAAGCGGAAAGAAGCAGATCTGAGGGCTCGAATGCTTAGCAATGTTTCCCGGGCTGCAACCGAGCCAGTATCGAACAAAAGGAGAAAGCTACGCAAAGTCACCGAGGCATATGGCTCTGCAGGTGCAAAAGAAAAGGAGTCAAAAGTTGGAGAAACTCTTCAATGTGAGAAAACAGAAGGTAGTTTTAAACTGAATGCTACAGTTTCAAACTTTTTGAAATTAGCTGTCAAAGAGGATAAGCAACAGAACGAGTTGGTGATTGAGCCGCTACTGGGAGAATCCAGTCCAAACGTATTTAGAGAAAAGCAGAAGGCCGAGGCGCCATTGGTATCGGTTGAAATCCAATCATCTGGTGTAAAGAAAAATCCCAAGGAGTGGAGCTGTGTACGATGTCAAGTAACCGTGCCGAGCGAAAAGATTTTTAATGAACACCTTCATGGCAAGAAGCACAAGCGCAATTTGACAATGCGACTGCAGGAGAAACCCAATCCTAGAGAAAATCTGAAGGTCAAGATGCCATTGGCATCCATCATCAATATTCAACCATTTGATGTGAAGAAAAAGAACAGGTGGACTTGTGCACTGTGTCAAGTTGCATCTGTGGCGAATAAAAAAGCATTAGATCAACACATTCGTGGATGGAGGCACAGGCGCAAAGAAGCTCTTCTGGGGGCTCGAAAGGAAAGCAATGTTTTAGAGGCTGCAACCGATCCAGTAACGAACGAAAGGAGAAACCTACTCGAAGTGACCGAGGCATCTGGCTCTGCAGGTACAGAAAAAAAGGAGCCAAAAGATGTAGAAACTGTTAAATGTGAGAAAACTGAAGTTATTTTTATTGACCTGACTTAG

Protein sequence

MLQETPNPEVFTENQKVKTPSVFTFGVKKNPKDKRSCADLKARNISQAASKQLSSKKGKLLKVTELAGSVGAKEKESEVGETLQCVKTEGSFIQHPIVPNFLKFAAKEDKQPNELGIELPHENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKRHKRKEADLRARMLSNVSRAATEPVSNKRRKLRKVTEAYGSAGAKEKESKVGETLQCEKTEGSFKLNATVSNFLKLAVKEDKQQNELVIEPLLGESSPNVFREKQKAEAPLVSVEIQSSGVKKNPKEWSCVRCQVTVPSEKIFNEHLHGKKHKRNLTMRLQEKPNPRENLKVKMPLASIINIQPFDVKKKNRWTCALCQVASVANKKALDQHIRGWRHRRKEALLGARKESNVLEAATDPVTNERRNLLEVTEASGSAGTEKKEPKDVETVKCEKTEVIFIDLT

Homology

[Close]

BLAST of Sed0017290 vs. NCBI nr
Match: KAG7030087.1 (hypothetical protein SDJN02_08434, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147.5 bits (371), Expect = 2.8e-31
Identity = 101/218 (46.33%), Postives = 132/218 (60.55%), Query Frame = 0


Query: 122 ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKR 181
           E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+
Sbjct: 160 EKPDPNLFREKRKAEMASTSSDNVQSSYMKKTPKGELSCALCQVTVTNEKVFNEHLHGKK 219

Query: 182 HKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYGSAGAKE-KESKVGETLQCEK 241
           HKR+EA LRA+  S + +AA  EP+SNKR KL K    +GSAGA E KESK GETLQ EK
Sbjct: 220 HKRREAGLRAQNASKLFQAAPPEPLSNKRMKLEK---TFGSAGAIELKESKDGETLQGEK 279

Query: 242 TEGSFKLNATVSNFLKLAVKED-KQQNELVIEPLLGESSPNVFREKQKAEAPLVSVEIQS 301
           TEGSF  NA + NFL+   KED +QQN+      L     +VF +    E  L +     
Sbjct: 280 TEGSFVTNALIPNFLESGDKEDNEQQNQQNQNNNLENLLKSVFGQNFTTEDLLAA----- 339

Query: 302 SGVKKNPKEWSCVRCQVTVPSEKIFNEHLHGKKHKRNL 337
              KK  K W C +C+V   +  +   HL+GKKH+ NL
Sbjct: 340 ---KKKFKFW-CKKCKVGAYAAGVMVAHLNGKKHQANL 365

[Close]

BLAST of Sed0017290 vs. NCBI nr
Match: XP_022946537.1 (zinc finger protein 830-like [Cucurbita moschata])

HSP 1 Score: 131.7 bits (330), Expect = 1.6e-26
Identity = 79/145 (54.48%), Postives = 100/145 (68.97%), Query Frame = 0


Query: 122 ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKR 181
           E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+
Sbjct: 226 EKPDPNVFREKRKAEMASTSSDNVQSSYMKKTPKGELSCALCQVTVTNEKVFNEHLHGKK 285

Query: 182 HKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYGSAGAKE-KESKVGETLQCEK 241
           HKR+EA LRA+  S + +AA  EP+SNKR KL K    +GSAGA E KESK GETLQ EK
Sbjct: 286 HKRREAGLRAQNASKLFQAAPPEPLSNKRMKLEK---TFGSAGAIELKESKDGETLQGEK 345

Query: 242 TEGSFKLNATVSNFLKLAVKEDKQQ 265
           TEGSF  NA + NFL+   KED +Q
Sbjct: 346 TEGSFVTNALIPNFLESDDKEDNEQ 367

[Close]

BLAST of Sed0017290 vs. NCBI nr
Match: XP_038890955.1 (uncharacterized protein LOC120080381 isoform X2 [Benincasa hispida])

HSP 1 Score: 131.0 bits (328), Expect = 2.7e-26
Identity = 95/221 (42.99%), Postives = 129/221 (58.37%), Query Frame = 0


Query: 122 ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKR 181
           E P+P + REK+K  T S ST  I+    KK  K+EWSC L ++T   +M +++HL+GK+
Sbjct: 193 EKPDPNVFREKRKAST-SLSTNDIQLSIVKKASKDEWSCVLYKVTTTNKMMFNQHLHGKK 252

Query: 182 HKRKEADLRARMLSNVSRAATEPVSNKRRKLRKVTEAYGSA--GAKEKESKVGETLQCEK 241
           H+RKEA LRA+   N+SRAA E +  KRRKL K TE   SA  GA+ KESK  ETLQ EK
Sbjct: 253 HQRKEASLRAQKEINISRAAPESLLKKRRKLCKATEMLSSAAVGAEAKESK-HETLQGEK 312

Query: 242 TEGSFKLNA-TVSNFLKLAVKED-KQQNELVI--EPLLGESSPNVFREKQKAEAPLVSVE 301
            +GSF +NA  V +FLKL  KED KQQN  +   + L+GE   ++  EK+          
Sbjct: 313 NDGSFDMNALVVPSFLKLGDKEDNKQQNNQITFGQNLIGED--DIVAEKK---------- 372

Query: 302 IQSSGVKKNPKEWSCVRCQVTVPSEKIFNEHLHGKKHKRNL 337
                       + C +C+V     K+   H++GKKH+ NL
Sbjct: 373 ----------FNFWCEKCKVGAYDTKVMLAHVNGKKHQTNL 389

[Close]

BLAST of Sed0017290 vs. NCBI nr
Match: XP_038890954.1 (uncharacterized protein LOC120080381 isoform X1 [Benincasa hispida])

HSP 1 Score: 131.0 bits (328), Expect = 2.7e-26
Identity = 95/221 (42.99%), Postives = 129/221 (58.37%), Query Frame = 0


Query: 122 ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKR 181
           E P+P + REK+K  T S ST  I+    KK  K+EWSC L ++T   +M +++HL+GK+
Sbjct: 195 EKPDPNVFREKRKAST-SLSTNDIQLSIVKKASKDEWSCVLYKVTTTNKMMFNQHLHGKK 254

Query: 182 HKRKEADLRARMLSNVSRAATEPVSNKRRKLRKVTEAYGSA--GAKEKESKVGETLQCEK 241
           H+RKEA LRA+   N+SRAA E +  KRRKL K TE   SA  GA+ KESK  ETLQ EK
Sbjct: 255 HQRKEASLRAQKEINISRAAPESLLKKRRKLCKATEMLSSAAVGAEAKESK-HETLQGEK 314

Query: 242 TEGSFKLNA-TVSNFLKLAVKED-KQQNELVI--EPLLGESSPNVFREKQKAEAPLVSVE 301
            +GSF +NA  V +FLKL  KED KQQN  +   + L+GE   ++  EK+          
Sbjct: 315 NDGSFDMNALVVPSFLKLGDKEDNKQQNNQITFGQNLIGED--DIVAEKK---------- 374

Query: 302 IQSSGVKKNPKEWSCVRCQVTVPSEKIFNEHLHGKKHKRNL 337
                       + C +C+V     K+   H++GKKH+ NL
Sbjct: 375 ----------FNFWCEKCKVGAYDTKVMLAHVNGKKHQTNL 391

[Close]

BLAST of Sed0017290 vs. NCBI nr
Match: XP_023546779.1 (zinc finger protein 830-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 130.6 bits (327), Expect = 3.6e-26
Identity = 86/170 (50.59%), Postives = 109/170 (64.12%), Query Frame = 0


Query: 122 ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKR 181
           E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+
Sbjct: 184 EKPDPNLFREKRKAEMASTSSDNVQSSYMKKTPKGELSCALCQVTVTNEKVFNEHLHGKK 243

Query: 182 HKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYGSAGAKE-KESKVGETLQCEK 241
           HKR+EA LRA+  S   +AA  EP+SNKR KL K    +GSAGA E KESK GETLQ EK
Sbjct: 244 HKRREAGLRAQNASKFFQAAPPEPLSNKRMKLEK---TFGSAGAIELKESKDGETLQGEK 303

Query: 242 TEGSFKLNATVSNFLKLAVKED-KQQNELVIEPLLGESSPNVFREKQKAE 289
           TEGSF  NA + NFL+   KED +QQN+      L     +V +E  K E
Sbjct: 304 TEGSFVANALIPNFLESGDKEDNEQQNQQNQNNNLENLLKSVEKEDDKQE 350

[Close]

BLAST of Sed0017290 vs. ExPASy TrEMBL
Match: A0A6J1G3Z8 (zinc finger protein 830-like OS=Cucurbita moschata OX=3662 GN=LOC111450573 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 7.8e-27
Identity = 79/145 (54.48%), Postives = 100/145 (68.97%), Query Frame = 0


Query: 122 ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKR 181
           E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+
Sbjct: 226 EKPDPNVFREKRKAEMASTSSDNVQSSYMKKTPKGELSCALCQVTVTNEKVFNEHLHGKK 285

Query: 182 HKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYGSAGAKE-KESKVGETLQCEK 241
           HKR+EA LRA+  S + +AA  EP+SNKR KL K    +GSAGA E KESK GETLQ EK
Sbjct: 286 HKRREAGLRAQNASKLFQAAPPEPLSNKRMKLEK---TFGSAGAIELKESKDGETLQGEK 345

Query: 242 TEGSFKLNATVSNFLKLAVKEDKQQ 265
           TEGSF  NA + NFL+   KED +Q
Sbjct: 346 TEGSFVTNALIPNFLESDDKEDNEQ 367

[Close]

BLAST of Sed0017290 vs. ExPASy TrEMBL
Match: A0A6J1KKC7 (zinc finger protein 830-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493944 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.9e-26
Identity = 78/145 (53.79%), Postives = 99/145 (68.28%), Query Frame = 0


Query: 122 ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKR 181
           E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+
Sbjct: 208 EKPDPNVFREKRKAEMASTSSDNVQSSYMKKTPKGELSCALCQVTVTNEKVFNEHLHGKK 267

Query: 182 HKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYGSAGAKE-KESKVGETLQCEK 241
           HKR+EA LRA+  S + +AA  EP+S KR KL K    +GSAGA E KESK GETLQ EK
Sbjct: 268 HKRREAGLRAQNASKLFQAAPPEPLSYKRMKLEK---TFGSAGAIELKESKDGETLQGEK 327

Query: 242 TEGSFKLNATVSNFLKLAVKEDKQQ 265
           TEGSF  NA + NFL+   KED +Q
Sbjct: 328 TEGSFVTNALIPNFLESGDKEDNEQ 349

[Close]

BLAST of Sed0017290 vs. ExPASy TrEMBL
Match: A0A6J1KBF0 (zinc finger protein 830-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111493944 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.9e-26
Identity = 78/145 (53.79%), Postives = 99/145 (68.28%), Query Frame = 0


Query: 122 ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKR 181
           E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+
Sbjct: 208 EKPDPNVFREKRKAEMASTSSDNVQSSYMKKTPKGELSCALCQVTVTNEKVFNEHLHGKK 267

Query: 182 HKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYGSAGAKE-KESKVGETLQCEK 241
           HKR+EA LRA+  S + +AA  EP+S KR KL K    +GSAGA E KESK GETLQ EK
Sbjct: 268 HKRREAGLRAQNASKLFQAAPPEPLSYKRMKLEK---TFGSAGAIELKESKDGETLQGEK 327

Query: 242 TEGSFKLNATVSNFLKLAVKEDKQQ 265
           TEGSF  NA + NFL+   KED +Q
Sbjct: 328 TEGSFVTNALIPNFLESGDKEDNEQ 349

[Close]

BLAST of Sed0017290 vs. ExPASy TrEMBL
Match: A0A6J1KDP5 (zinc finger protein 830-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111493944 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.9e-26
Identity = 78/145 (53.79%), Postives = 99/145 (68.28%), Query Frame = 0


Query: 122 ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKR 181
           E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+
Sbjct: 208 EKPDPNVFREKRKAEMASTSSDNVQSSYMKKTPKGELSCALCQVTVTNEKVFNEHLHGKK 267

Query: 182 HKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYGSAGAKE-KESKVGETLQCEK 241
           HKR+EA LRA+  S + +AA  EP+S KR KL K    +GSAGA E KESK GETLQ EK
Sbjct: 268 HKRREAGLRAQNASKLFQAAPPEPLSYKRMKLEK---TFGSAGAIELKESKDGETLQGEK 327

Query: 242 TEGSFKLNATVSNFLKLAVKEDKQQ 265
           TEGSF  NA + NFL+   KED +Q
Sbjct: 328 TEGSFVTNALIPNFLESGDKEDNEQ 349

[Close]

BLAST of Sed0017290 vs. ExPASy TrEMBL
Match: A0A6J1KKD2 (myb-like protein D isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111493944 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.9e-26
Identity = 78/145 (53.79%), Postives = 99/145 (68.28%), Query Frame = 0


Query: 122 ENPNPYIVREKQKVETLSASTFGIKSFGGKKDPKEEWSCDLCQLTMWTEMHYSEHLYGKR 181
           E P+P + REK+K E  S S+  ++S   KK PK E SC LCQ+T+  E  ++EHL+GK+
Sbjct: 208 EKPDPNVFREKRKAEMASTSSDNVQSSYMKKTPKGELSCALCQVTVTNEKVFNEHLHGKK 267

Query: 182 HKRKEADLRARMLSNVSRAA-TEPVSNKRRKLRKVTEAYGSAGAKE-KESKVGETLQCEK 241
           HKR+EA LRA+  S + +AA  EP+S KR KL K    +GSAGA E KESK GETLQ EK
Sbjct: 268 HKRREAGLRAQNASKLFQAAPPEPLSYKRMKLEK---TFGSAGAIELKESKDGETLQGEK 327

Query: 242 TEGSFKLNATVSNFLKLAVKEDKQQ 265
           TEGSF  NA + NFL+   KED +Q
Sbjct: 328 TEGSFVTNALIPNFLESGDKEDNEQ 349

The following BLAST results are available for this feature:

BLAST of Sed0017290 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7030087.1	2.8e-31	46.33	hypothetical protein SDJN02_08434, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022946537.1	1.6e-26	54.48	zinc finger protein 830-like [Cucurbita moschata]	[more]
XP_038890955.1	2.7e-26	42.99	uncharacterized protein LOC120080381 isoform X2 [Benincasa hispida]	[more]
XP_038890954.1	2.7e-26	42.99	uncharacterized protein LOC120080381 isoform X1 [Benincasa hispida]	[more]
XP_023546779.1	3.6e-26	50.59	zinc finger protein 830-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Sed0017290 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0017290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G3Z8	7.8e-27	54.48	zinc finger protein 830-like OS=Cucurbita moschata OX=3662 GN=LOC111450573 PE=4 ...	[more]
A0A6J1KKC7	3.9e-26	53.79	zinc finger protein 830-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493...	[more]
A0A6J1KBF0	3.9e-26	53.79	zinc finger protein 830-like isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111493...	[more]
A0A6J1KDP5	3.9e-26	53.79	zinc finger protein 830-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111493...	[more]
A0A6J1KKD2	3.9e-26	53.79	myb-like protein D isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111493944 PE=4 S...	[more]

BLAST of Sed0017290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003604	Matrin/U1-C-like, C2H2-type zinc finger	SMART	SM00451	ZnF_U1_5	coord: 305..339 e-value: 0.012 score: 24.7 coord: 155..189 e-value: 0.0015 score: 27.8 coord: 370..405 e-value: 0.17 score: 18.4
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 158..182 e-value: 12.0 score: 12.5 coord: 373..398 e-value: 18.0 score: 11.1 coord: 308..332 e-value: 24.0 score: 9.9
None	No IPR available	PFAM	PF12874	zf-met	coord: 158..182 e-value: 0.0017 score: 18.6 coord: 308..332 e-value: 2.0E-5 score: 24.8
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 283..339 e-value: 1.2E-8 score: 36.3
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 150..193 e-value: 1.9E-7 score: 32.5
None	No IPR available	PANTHER	PTHR47487	OS06G0651300 PROTEIN-RELATED	coord: 118..232
None	No IPR available	PANTHER	PTHR47487:SF8	OS06G0651300 PROTEIN	coord: 363..446 coord: 271..338
None	No IPR available	PANTHER	PTHR47487:SF8	OS06G0651300 PROTEIN	coord: 118..232
None	No IPR available	PANTHER	PTHR47487	OS06G0651300 PROTEIN-RELATED	coord: 363..446 coord: 271..338
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 152..192
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 295..341

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0017290.1	Sed0017290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding