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Sed0017170 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAACCCTCAATTCAAAATCTCATATGTTGATATTCCAGAGGTTCCAATGAGCAACATTCCCACTTCCTTCACCGATTCCTCGTTTTCCCTTTTCACCCTCGCCATTTCCTCCTCAGATCCTTGGCCCTTTTCTCTGTAACACCCACCATTTCAATTTCTCGATTCCGTTCTAGCTAGGGTTTGCTGTGTTCTTCCGATGAAGCACCCGCACCATAATCTTCTGCACATGAATCTGAATCTCCACATTCATTTGCCTCACCGGGCCAAGCCCGACACGCCCAAGGGCTGTTTCGTCATCCTCGTGGGTCGAGAACAAGAGCGCTTTGTGGTTCCTATTGTGTATGTCAACCATCCCTTGTTTGTTGAGCTCTTGAAAGCGGCCGAGGATGAGTATGGCTTCGACCAGAAAGGACCCATTTCGATTCCCTGCCCGGTCGATGATTTTCTTGCTCTACGAGGCGTGATTCACCATGATTGCTCTGTTCATCATCTGCCCATCTCGTGTTTTAAGCATTCTTAGTGATGTTGATGAAAATATGATATAGCTTTGTTCTGTTTTTATTTGTTCATACCTTTTATAGATTGTTCTCAGCTGTTCAAGATGTTGTTGGGTTTTGTTTGATCTTTGTAAAACATTCATTGGGCTTAATTGAAGCTGTTGGAACTGTCTTGCTTTGGATTTAGGATGGAGATTGATTTGCTTGCAAGGGTATATAATAGCTAGTGATGAAAACCAGCCTTAGTTCTTTATTTGTGTTCTGTTTTTATTTGTTCATACCTTTACAAGATCACAGATTGTTCTCAGCAATTCCACATGTTGGGTTTGTTTGTTCTTTGTAAACATTCATTGGGCTAATTGAAGCTGTTTGAGTTGGCTGTGATACTTGATAAAATATAATTGTCTTGTTTTGGATTTGAAGTGGAAATTGATTTGCTTGTAAAGCTATATAATAGCTATTGATGAAAACCAACCTTGGCTCTTTGTTTCTGTTTATCTTTGCAGATTGATCTCTTGTTTTATCTTTGTAAACATTCATT AAAAAACCCTCAATTCAAAATCTCATATGTTGATATTCCAGAGGTTCCAATGAGCAACATTCCCACTTCCTTCACCGATTCCTCGTTTTCCCTTTTCACCCTCGCCATTTCCTCCTCAGATCCTTGGCCCTTTTCTCTGTAACACCCACCATTTCAATTTCTCGATTCCGTTCTAGCTAGGGTTTGCTGTGTTCTTCCGATGAAGCACCCGCACCATAATCTTCTGCACATGAATCTGAATCTCCACATTCATTTGCCTCACCGGGCCAAGCCCGACACGCCCAAGGGCTGTTTCGTCATCCTCGTGGGTCGAGAACAAGAGCGCTTTGTGGTTCCTATTGTGTATGTCAACCATCCCTTGTTTGTTGAGCTCTTGAAAGCGGCCGAGGATGAGTATGGCTTCGACCAGAAAGGACCCATTTCGATTCCCTGCCCGGTCGATGATTTTCTTGCTCTACGAGGCGTGATTCACCATGATTGCTCTGTTCATCATCTGCCCATCTCGTGTTTTAAGCATTCTTAGTGATGTTGATGAAAATATGATATAGCTTTGTTCTGTTTTTATTTGTTCATACCTTTTATAGATTGTTCTCAGCTGTTCAAGATGTTGTTGGGTTTTGTTTGATCTTTGTAAAACATTCATTGGGCTTAATTGAAGCTGTTGGAACTGTCTTGCTTTGGATTTAGGATGGAGATTGATTTGCTTGCAAGGGTATATAATAGCTAGTGATGAAAACCAGCCTTAGTTCTTTATTTGTGTTCTGTTTTTATTTGTTCATACCTTTACAAGATCACAGATTGTTCTCAGCAATTCCACATGTTGGGTTTGTTTGTTCTTTGTAAACATTCATTGGGCTAATTGAAGCTGTTTGAGTTGGCTGTGATACTTGATAAAATATAATTGTCTTGTTTTGGATTTGAAGTGGAAATTGATTTGCTTGTAAAGCTATATAATAGCTATTGATGAAAACCAACCTTGGCTCTTTGTTTCTGTTTATCTTTGCAGATTGATCTCTTGTTTTATCTTTGTAAACATTCATT ATGAAGCACCCGCACCATAATCTTCTGCACATGAATCTGAATCTCCACATTCATTTGCCTCACCGGGCCAAGCCCGACACGCCCAAGGGCTGTTTCGTCATCCTCGTGGGTCGAGAACAAGAGCGCTTTGTGGTTCCTATTGTGTATGTCAACCATCCCTTGTTTGTTGAGCTCTTGAAAGCGGCCGAGGATGAGTATGGCTTCGACCAGAAAGGACCCATTTCGATTCCCTGCCCGGTCGATGATTTTCTTGCTCTACGAGGCGTGATTCACCATGATTGCTCTGTTCATCATCTGCCCATCTCGTGTTTTAAGCATTCTTAG MKHPHHNLLHMNLNLHIHLPHRAKPDTPKGCFVILVGREQERFVVPIVYVNHPLFVELLKAAEDEYGFDQKGPISIPCPVDDFLALRGVIHHDCSVHHLPISCFKHS Homology
BLAST of Sed0017170 vs. NCBI nr
Match: KGN49830.1 (hypothetical protein Csa_000428 [Cucumis sativus]) HSP 1 Score: 168.3 bits (425), Expect = 3.6e-38 Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 0
BLAST of Sed0017170 vs. NCBI nr
Match: KAG6605808.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 168.3 bits (425), Expect = 3.6e-38 Identity = 76/108 (70.37%), Postives = 90/108 (83.33%), Query Frame = 0
BLAST of Sed0017170 vs. NCBI nr
Match: XP_022974339.1 (auxin-responsive protein SAUR32-like [Cucurbita maxima]) HSP 1 Score: 163.3 bits (412), Expect = 1.1e-36 Identity = 74/110 (67.27%), Postives = 88/110 (80.00%), Query Frame = 0
BLAST of Sed0017170 vs. NCBI nr
Match: KAG7016800.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 162.5 bits (410), Expect = 2.0e-36 Identity = 74/110 (67.27%), Postives = 87/110 (79.09%), Query Frame = 0
BLAST of Sed0017170 vs. NCBI nr
Match: XP_023549648.1 (auxin-responsive protein SAUR32 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 162.5 bits (410), Expect = 2.0e-36 Identity = 74/110 (67.27%), Postives = 87/110 (79.09%), Query Frame = 0
BLAST of Sed0017170 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 1.7e-19 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 0
BLAST of Sed0017170 vs. ExPASy Swiss-Prot
Match: O22150 (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana OX=3702 GN=SAUR36 PE=2 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 3.9e-11 Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 0
BLAST of Sed0017170 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 8.6e-11 Identity = 29/65 (44.62%), Postives = 43/65 (66.15%), Query Frame = 0
BLAST of Sed0017170 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.9e-10 Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 0
BLAST of Sed0017170 vs. ExPASy Swiss-Prot
Match: P33081 (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 5.6e-10 Identity = 27/67 (40.30%), Postives = 42/67 (62.69%), Query Frame = 0
BLAST of Sed0017170 vs. ExPASy TrEMBL
Match: A0A0A0KJC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139100 PE=3 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 1.7e-38 Identity = 73/110 (66.36%), Postives = 89/110 (80.91%), Query Frame = 0
BLAST of Sed0017170 vs. ExPASy TrEMBL
Match: A0A6J1IHB8 (auxin-responsive protein SAUR32-like OS=Cucurbita maxima OX=3661 GN=LOC111472971 PE=3 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 5.6e-37 Identity = 74/110 (67.27%), Postives = 88/110 (80.00%), Query Frame = 0
BLAST of Sed0017170 vs. ExPASy TrEMBL
Match: A0A371HRN4 (Auxin-responsive protein SAUR32 (Fragment) OS=Mucuna pruriens OX=157652 GN=SAUR32 PE=3 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 4.4e-26 Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = 0
BLAST of Sed0017170 vs. ExPASy TrEMBL
Match: A0A6A3C513 (Auxin-responsive protein SAUR32 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00011112pilonHSYRG00007 PE=3 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 6.4e-25 Identity = 58/101 (57.43%), Postives = 76/101 (75.25%), Query Frame = 0
BLAST of Sed0017170 vs. ExPASy TrEMBL
Match: A0A1U8LPB1 (auxin-responsive protein SAUR32-like isoform X1 OS=Gossypium hirsutum OX=3635 GN=LOC107929477 PE=3 SV=1) HSP 1 Score: 122.5 bits (306), Expect = 1.1e-24 Identity = 55/112 (49.11%), Postives = 78/112 (69.64%), Query Frame = 0
BLAST of Sed0017170 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 96.7 bits (239), Expect = 1.2e-20 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 0
BLAST of Sed0017170 vs. TAIR 10
Match: AT5G53590.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 92.8 bits (229), Expect = 1.8e-19 Identity = 47/111 (42.34%), Postives = 64/111 (57.66%), Query Frame = 0
BLAST of Sed0017170 vs. TAIR 10
Match: AT4G00880.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 90.1 bits (222), Expect = 1.1e-18 Identity = 49/111 (44.14%), Postives = 67/111 (60.36%), Query Frame = 0
BLAST of Sed0017170 vs. TAIR 10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 87.4 bits (215), Expect = 7.5e-18 Identity = 42/93 (45.16%), Postives = 62/93 (66.67%), Query Frame = 0
BLAST of Sed0017170 vs. TAIR 10
Match: AT3G60690.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 78.6 bits (192), Expect = 3.5e-15 Identity = 37/68 (54.41%), Postives = 48/68 (70.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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