Sed0017031 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTAAAACCATGACAGGCTTTGAAGGGTCCCTCTTTTATCTCTCCCTTCTCTCTATTATTTTATTAAAGTCATGAATTTGTAAGAGAAATCAAACCATATCCAAAAATCTGAAGCCATGAATGTAGAGGAGGAAGTTGAGCGACTCAAGGAAGAAATTAAAAGGCTCGGCAAGCTTCAAGATGATGGTTCTTACAAGGTACTTCACGATTTTACTTCAACTTTTTTCCCTTATCTCTCTCAGATTTATAGATTTTGCGAATCTGGGTTCGAATTTGATGTGTTTCTGGGTTGGATCTTGAATCAGAAATTGGGTTTTTGTTATATTCTTGTATGGATTATGTTTCTCTTACTTTCAGAAGTAGATCTGTTTTGCCCACTATGTGTTTGATGTTTTGCCACTGTTGGGTTTGATTGGATTTGGTCAAAATTATGTGAACTGTGATTGAAGGGATTTGTTTGAACACTGCTGTTTTAACATTGTACATTTAAACCAATTTGAAAGCTGAAGTCTCTGTGCTGCTTGCCTTAGCCTTCTCTTTTCCTGGATAAAATGGATTGAAACACAATCTTGTGATCTAGAAAATGCTTAATTGTGGTCTCCAAGACAACATTCTTAGTGGAGGCTTGGGGTCTTTGGGTAATATCGACTTAGAGATCTTTGGTTGAGTCTTCGAGTGAGCTTAATTATAAATTCTTTGGGACAAGCGCACGCACCAGAGTATTAATTGTGCCAAATATAGTATCAAATGGTAAGGTGGCGACTTCGATTTCCCAATCATCTAAAAAAATATGTTGAATTGTTGGTCAAAATCAGAGATGAGATCCCAAGGGGTGGCACAGTGGTTGAAGACTTGGGTTTTGAGGGTATGCTCCCCTCAAGGTCCCAGGTTCGAGACCCAGTTGTGTCATTACTCCTTCGATGTCTCCCAGTGTCTGGCTTAAGGATGGGCGTGGTTACCCTTGTTTTAAAAAAAACAAAATCAAAGACGAACTTTCCTCTAGTAGAGATATCTGATTGGAATAGTAATTAGGGTCATAAATGGCCGAGTTATTTTTAGATCTTCAAGCAAATGGTGCCATTTGTTGATGTGAAATGGAAATTTCCAGCCCAATGGTGCCATCAATATCTTCTACAAGTTTGTGTTTATCATTCTTGATCTAGTAGGGTCAAACAATTATCCAGCAAGAATAGTCGATGTTTGCGCAAATTAATTTAGACATTCACGAATTTCAAAACAAATTTGTTCTTTATCATTTTTGTTCTAATCAAATATTTAGAACTAGATCAATCTTCTAATAGTGCTTAAACTATTCACTATGCTACAGAAAAATGGATATGGCTAACAAACATCCATATTACAGGATCTAACTTGTTTCCATGTACATGGATGACGTACTTTGTCAACATGAAAAACCAAATTTACACAGAATCTCTTTTCATAAAGATTTTGATTTTCAATTTGCAGGTAACTTTTGGGGTGATGTTCAATGATGATCGATGCGCTAACATATTCGAAGCGCTGGTCGGGACGCTACGAGCTGCAAAGAAAAGAAAATTTGTGACTTATGATGGTGAGTTGTTGCTGCAAGGTGTTCATGATAATGTTGAGATCATTCTCAAAGCCACTCCAGCAACAGAAGGTGCAAGTGCAACCACCACAGCGGTGAAAGCTTGAACATGTAATTTGAAAACAATATCTGCATCTTAATATTGCGCATCACGATTTTCATTTGATAACATGTTCTTCGTATTCGAACTCGAGTTACCTCGTGTCTTAGACTTCAATTCTAATACATCAAGACGATCATTTGTGTGACGATCGGATCTACCAATTGTTCCTTGCTTGAAAATTCCATCAAATGGTGTTGTAATGTACAATGGTTCCTAAAGAAAATCTTGGGTGGCGAATGAGGTGAGAATTTTTTTCAATATCAAGAAGGGAAAATATAACAATAAGTTCGAACATTTATAATGAAGTGGATGAAGAATGAGG ATTAAAACCATGACAGGCTTTGAAGGGTCCCTCTTTTATCTCTCCCTTCTCTCTATTATTTTATTAAAGTCATGAATTTGTAAGAGAAATCAAACCATATCCAAAAATCTGAAGCCATGAATGTAGAGGAGGAAGTTGAGCGACTCAAGGAAGAAATTAAAAGGCTCGGCAAGCTTCAAGATGATGGTTCTTACAAGGTAACTTTTGGGGTGATGTTCAATGATGATCGATGCGCTAACATATTCGAAGCGCTGGTCGGGACGCTACGAGCTGCAAAGAAAAGAAAATTTGTGACTTATGATGGTGAGTTGTTGCTGCAAGGTGTTCATGATAATGTTGAGATCATTCTCAAAGCCACTCCAGCAACAGAAGGTGCAAGTGCAACCACCACAGCGGTGAAAGCTTGAACATGTAATTTGAAAACAATATCTGCATCTTAATATTGCGCATCACGATTTTCATTTGATAACATGTTCTTCGTATTCGAACTCGAGTTACCTCGTGTCTTAGACTTCAATTCTAATACATCAAGACGATCATTTGTGTGACGATCGGATCTACCAATTGTTCCTTGCTTGAAAATTCCATCAAATGGTGTTGTAATGTACAATGGTTCCTAAAGAAAATCTTGGGTGGCGAATGAGGTGAGAATTTTTTTCAATATCAAGAAGGGAAAATATAACAATAAGTTCGAACATTTATAATGAAGTGGATGAAGAATGAGG ATGAATGTAGAGGAGGAAGTTGAGCGACTCAAGGAAGAAATTAAAAGGCTCGGCAAGCTTCAAGATGATGGTTCTTACAAGGTAACTTTTGGGGTGATGTTCAATGATGATCGATGCGCTAACATATTCGAAGCGCTGGTCGGGACGCTACGAGCTGCAAAGAAAAGAAAATTTGTGACTTATGATGGTGAGTTGTTGCTGCAAGGTGTTCATGATAATGTTGAGATCATTCTCAAAGCCACTCCAGCAACAGAAGGTGCAAGTGCAACCACCACAGCGGTGAAAGCTTGA MNVEEEVERLKEEIKRLGKLQDDGSYKVTFGVMFNDDRCANIFEALVGTLRAAKKRKFVTYDGELLLQGVHDNVEIILKATPATEGASATTTAVKA Homology
BLAST of Sed0017031 vs. NCBI nr
Match: XP_011653450.1 (costars family protein isoform X1 [Cucumis sativus]) HSP 1 Score: 163.3 bits (412), Expect = 1.0e-36 Identity = 86/95 (90.53%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of Sed0017031 vs. NCBI nr
Match: XP_022149133.1 (costars family protein [Momordica charantia]) HSP 1 Score: 162.2 bits (409), Expect = 2.3e-36 Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0
BLAST of Sed0017031 vs. NCBI nr
Match: XP_022922531.1 (costars family protein [Cucurbita moschata] >XP_022984243.1 costars family protein [Cucurbita maxima] >KAG6576881.1 Costars family protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014905.1 Costars family protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 162.2 bits (409), Expect = 2.3e-36 Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0
BLAST of Sed0017031 vs. NCBI nr
Match: XP_008454461.1 (PREDICTED: costars family protein [Cucumis melo] >KAA0044286.1 costars family protein [Cucumis melo var. makuwa] >TYK29417.1 costars family protein [Cucumis melo var. makuwa]) HSP 1 Score: 161.8 bits (408), Expect = 3.0e-36 Identity = 85/95 (89.47%), Postives = 87/95 (91.58%), Query Frame = 0
BLAST of Sed0017031 vs. NCBI nr
Match: PQM33530.1 (costars family protein [Prunus yedoensis var. nudiflora] >PQM35497.1 costars family protein [Prunus yedoensis var. nudiflora]) HSP 1 Score: 160.2 bits (404), Expect = 8.7e-36 Identity = 81/94 (86.17%), Postives = 86/94 (91.49%), Query Frame = 0
BLAST of Sed0017031 vs. ExPASy Swiss-Prot
Match: A2XKU9 (Costars family protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_012692 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 4.6e-32 Identity = 70/87 (80.46%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of Sed0017031 vs. ExPASy Swiss-Prot
Match: Q6AVK1 (Costars family protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0690000 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 4.6e-32 Identity = 70/87 (80.46%), Postives = 74/87 (85.06%), Query Frame = 0
BLAST of Sed0017031 vs. ExPASy Swiss-Prot
Match: Q8LBN7 (Costars family protein At4g33640 OS=Arabidopsis thaliana OX=3702 GN=At4g33640 PE=1 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.0e-31 Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = 0
BLAST of Sed0017031 vs. ExPASy Swiss-Prot
Match: B4YYA9 (Costars family protein ST45-2 OS=Eutrema halophilum OX=98038 PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 3.0e-31 Identity = 68/92 (73.91%), Postives = 76/92 (82.61%), Query Frame = 0
BLAST of Sed0017031 vs. ExPASy Swiss-Prot
Match: A9NK39 (Costars family protein WS02710_H03 OS=Picea sitchensis OX=3332 PE=3 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 1.5e-30 Identity = 66/82 (80.49%), Postives = 73/82 (89.02%), Query Frame = 0
BLAST of Sed0017031 vs. ExPASy TrEMBL
Match: A0A6J1J9Z5 (costars family protein OS=Cucurbita maxima OX=3661 GN=LOC111482614 PE=3 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36 Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0
BLAST of Sed0017031 vs. ExPASy TrEMBL
Match: A0A6J1D600 (costars family protein OS=Momordica charantia OX=3673 GN=LOC111017626 PE=3 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36 Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0
BLAST of Sed0017031 vs. ExPASy TrEMBL
Match: A0A6J1E4D6 (costars family protein OS=Cucurbita moschata OX=3662 GN=LOC111430499 PE=3 SV=1) HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36 Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0
BLAST of Sed0017031 vs. ExPASy TrEMBL
Match: A0A5D3DZW0 (Costars family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00070 PE=3 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.5e-36 Identity = 85/95 (89.47%), Postives = 87/95 (91.58%), Query Frame = 0
BLAST of Sed0017031 vs. ExPASy TrEMBL
Match: A0A1S3BZW5 (costars family protein OS=Cucumis melo OX=3656 GN=LOC103494860 PE=3 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.5e-36 Identity = 85/95 (89.47%), Postives = 87/95 (91.58%), Query Frame = 0
BLAST of Sed0017031 vs. TAIR 10
Match: AT4G33640.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 137.1 bits (344), Expect = 7.4e-33 Identity = 68/93 (73.12%), Postives = 78/93 (83.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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