Sed0016810 (gene) Chayote v1

Overview


Name	Sed0016810
Type	gene
Organism	Sechium edule (Chayote v1)
Description	protein WHAT'S THIS FACTOR 1
Location	LG06: 44366134 .. 44368351 (-)
RNA-Seq Expression	Sed0016810
Synteny	Sed0016810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTAAAAAATATGGATAGATTCCTAGAAAATTTCCCAAATAAATACCATTGACTCAACTAAATTTTCAATTTTGAAAGACCCTACCCTTTGCCCTCACCAAAACCTGCAACTAAAGCGATGTTCATAAACAAAGCCGCCGCCAAAACCCTTCAAAAACCTCCCCATAAAACTCTTCTCTTCCTCTTTCACTACTTCCAAAATCCCCCTTATTCTTACACACAGAAATCCAGCTATGTCGATGTCTACATGAAATGGAAGAAAGATCCATATTACGATTCAATCGAACACATCCTCAAATCCACCGAGCTCCAATCCATCATCTCTCTCAAAAACTGCATCGCCCAAAACCCAGATGGGTCCATCCCAATTTCCGCCGTTTCAAAGCGAGGCCTCCAAATGGGCCTGTCCATGAAGGTTGCTAGGTTTTTGAGGCAATACCCATCAATTTTCGAGGAGTTTACAGGTCCGGAGTACAATCATCCATGGTTCAAATTGACCCAAAAAGCTGCGGAGATTGATGCTGAAGAGAAAAGGGTTTATCAGAATTGCAGGGAGGATTTGATTTGCAGGTTGAAGAAGTTCATATTGATGAGTAAGAATCGTGCCCTGCCTTTGAAGATAATCCAAGGTATGCAATGGTATTTAGGGATTCCTGATGATTTTTTGCATAATCCTGATGTTAATCTTGATGGGTCTTTTAGGCTAGTGAAAATGGAAGATGGGTTGGAGGGATTAGCTGTGGAATGTGATGAGAATTTTATGTCTGTTGTGCAAAAAAATGGTGTAAAAAGAGGGGTTTATTCTGGTGGAACAATGGAGCCACTTGAATTTCCACTTTTCCCTTCAAAGGGTTTAAGGCTGAGGAAGAAGATTGAGGATTGGTTACTGGAGTTTCAGAAACTTCCTTATGTATCTCCTTATAGTGATTTTTGTCATTTGGATCCAAATAGTGATATAGCTGAGAAAAGATTGGTGGGGTTTCTTCATGAGTTGCTTTGTTTATTTGTTGAGCATTCAGCTGAAAGGAAGAAGCTTCTGTGCCTTAAAAAGTATATGGGTTTGCCTCAAAAGGTTCATAAGGCATTTGAGAGACATCCTCATATGTTTTACTTGTCTCTAAAGAACAAGACGTGTACTGCTGTTCTTAAAGAGGCTTATTGTGATAAGTCATCTATTGAGAGGCACCCCATATTGAGAATTAGGCGAAAGTACATTAATCTGATGAAGGAATCTGAAGTGCTTTTGAAGAATAGGAGGTTTAGTAATCGTCTTGTTCGTGGAGATAATCTGGCGTTGGACTTGGATTTGGATGCTGCAGATGAAGATGGAAAAGAAATTCCCAAGTGTTGATGCTTGAGTGAGTGTTTGGAGGATTCATTCTCTTTTGTTTGATATGTGTAAGTGTTTGGATCAAGTTACGCGCATCTCGACTATTCTGACAAGACATATTGCCTGACCTTATAGCATTTGAACGTGAAAAGGAACCTGTAGAGATTTAATTTCTAGGGGGATGATTGCCATGAATTGAATTCATTACCTATTGGTTTTCCAAACTTGCCTGACCACTAGCAAACCCTTCAATTATCATAAGTTTGATTGTTGCAATGCTGTAGGAAATCAAAGACCAGTTTACAGTGGAAAATAGATGGGTTGTATACAAGAACCAATACCAGACTTTTTTGGATTCAGAGGCAGAAGACTGGAATTTGGGCTTGAGAAGGCAAATAAAAGAATCTGAGATTGAAGAATATGGGGGCACTCACTCATTATCCCAATACTAGCGCGTCACTCTTACTCTTTGGACAGGACAAGCTTTTATGAAAGCTCGAGCCACACGGCCACTGAAGTGCCTTCTATGTTGCACTAAAAATACTCAATATGGAGGTCTCGCTAACCGGTCTACAAGTCAAGAGTCGAGGGGTGAAGTGCTTGGAGGATGCTCGAGGGCAACGCTCTTGAAGCCTAGAAAATATGTTAATTTATGTTTTATCTTTTCATATTTGGTTTTTATGTAATTTAGCTCGGTCCCAACCACGGACTCACCCCTCCTCTCTTTGAAGGAATCTGGACAGCAAAATACCCAAAAAATCAAAATTTTCTTGTGGAGGCGAGCACATGGAGCCATCGCTTTTTATGTAATTTATGCCTATATGAACTTGATTCTGGAAGTACACCTTGATTCATATGAAAACTATTACGTATGATGAAATTAAAAC

mRNA sequence

CCCTAAAAAATATGGATAGATTCCTAGAAAATTTCCCAAATAAATACCATTGACTCAACTAAATTTTCAATTTTGAAAGACCCTACCCTTTGCCCTCACCAAAACCTGCAACTAAAGCGATGTTCATAAACAAAGCCGCCGCCAAAACCCTTCAAAAACCTCCCCATAAAACTCTTCTCTTCCTCTTTCACTACTTCCAAAATCCCCCTTATTCTTACACACAGAAATCCAGCTATGTCGATGTCTACATGAAATGGAAGAAAGATCCATATTACGATTCAATCGAACACATCCTCAAATCCACCGAGCTCCAATCCATCATCTCTCTCAAAAACTGCATCGCCCAAAACCCAGATGGGTCCATCCCAATTTCCGCCGTTTCAAAGCGAGGCCTCCAAATGGGCCTGTCCATGAAGGTTGCTAGGTTTTTGAGGCAATACCCATCAATTTTCGAGGAGTTTACAGGTCCGGAGTACAATCATCCATGGTTCAAATTGACCCAAAAAGCTGCGGAGATTGATGCTGAAGAGAAAAGGGTTTATCAGAATTGCAGGGAGGATTTGATTTGCAGGTTGAAGAAGTTCATATTGATGAGTAAGAATCGTGCCCTGCCTTTGAAGATAATCCAAGGTATGCAATGGTATTTAGGGATTCCTGATGATTTTTTGCATAATCCTGATGTTAATCTTGATGGGTCTTTTAGGCTAGTGAAAATGGAAGATGGGTTGGAGGGATTAGCTGTGGAATGTGATGAGAATTTTATGTCTGTTGTGCAAAAAAATGGTGTAAAAAGAGGGGTTTATTCTGGTGGAACAATGGAGCCACTTGAATTTCCACTTTTCCCTTCAAAGGGTTTAAGGCTGAGGAAGAAGATTGAGGATTGGTTACTGGAGTTTCAGAAACTTCCTTATGTATCTCCTTATAGTGATTTTTGTCATTTGGATCCAAATAGTGATATAGCTGAGAAAAGATTGGTGGGGTTTCTTCATGAGTTGCTTTGTTTATTTGTTGAGCATTCAGCTGAAAGGAAGAAGCTTCTGTGCCTTAAAAAGTATATGGGTTTGCCTCAAAAGGTTCATAAGGCATTTGAGAGACATCCTCATATGTTTTACTTGTCTCTAAAGAACAAGACGTGTACTGCTGTTCTTAAAGAGGCTTATTGTGATAAGTCATCTATTGAGAGGCACCCCATATTGAGAATTAGGCGAAAGTACATTAATCTGATGAAGGAATCTGAAGTGCTTTTGAAGAATAGGAGGTTTAGTAATCGTCTTGTTCGTGGAGATAATCTGGCGTTGGACTTGGATTTGGATGCTGCAGATGAAGATGGAAAAGAAATTCCCAAGTGTTGATGCTTGAGTGAGTGTTTGGAGGATTCATTCTCTTTTGTTTGATATGTGTAAGTGTTTGGATCAAGTTACGCGCATCTCGACTATTCTGACAAGACATATTGCCTGACCTTATAGCATTTGAACGTGAAAAGGAACCTGTAGAGATTTAATTTCTAGGGGGATGATTGCCATGAATTGAATTCATTACCTATTGGTTTTCCAAACTTGCCTGACCACTAGCAAACCCTTCAATTATCATAAGTTTGATTGTTGCAATGCTGTAGGAAATCAAAGACCAGTTTACAGTGGAAAATAGATGGGTTGTATACAAGAACCAATACCAGACTTTTTTGGATTCAGAGGCAGAAGACTGGAATTTGGGCTTGAGAAGGCAAATAAAAGAATCTGAGATTGAAGAATATGGGGGCACTCACTCATTATCCCAATACTAGCGCGTCACTCTTACTCTTTGGACAGGACAAGCTTTTATGAAAGCTCGAGCCACACGGCCACTGAAGTGCCTTCTATGTTGCACTAAAAATACTCAATATGGAGGTCTCGCTAACCGGTCTACAAGTCAAGAGTCGAGGGGTGAAGTGCTTGGAGGATGCTCGAGGGCAACGCTCTTGAAGCCTAGAAAATATGTTAATTTATGTTTTATCTTTTCATATTTGGTTTTTATGTAATTTAGCTCGGTCCCAACCACGGACTCACCCCTCCTCTCTTTGAAGGAATCTGGACAGCAAAATACCCAAAAAATCAAAATTTTCTTGTGGAGGCGAGCACATGGAGCCATCGCTTTTTATGTAATTTATGCCTATATGAACTTGATTCTGGAAGTACACCTTGATTCATATGAAAACTATTACGTATGATGAAATTAAAAC

Coding sequence (CDS)

ATGTTCATAAACAAAGCCGCCGCCAAAACCCTTCAAAAACCTCCCCATAAAACTCTTCTCTTCCTCTTTCACTACTTCCAAAATCCCCCTTATTCTTACACACAGAAATCCAGCTATGTCGATGTCTACATGAAATGGAAGAAAGATCCATATTACGATTCAATCGAACACATCCTCAAATCCACCGAGCTCCAATCCATCATCTCTCTCAAAAACTGCATCGCCCAAAACCCAGATGGGTCCATCCCAATTTCCGCCGTTTCAAAGCGAGGCCTCCAAATGGGCCTGTCCATGAAGGTTGCTAGGTTTTTGAGGCAATACCCATCAATTTTCGAGGAGTTTACAGGTCCGGAGTACAATCATCCATGGTTCAAATTGACCCAAAAAGCTGCGGAGATTGATGCTGAAGAGAAAAGGGTTTATCAGAATTGCAGGGAGGATTTGATTTGCAGGTTGAAGAAGTTCATATTGATGAGTAAGAATCGTGCCCTGCCTTTGAAGATAATCCAAGGTATGCAATGGTATTTAGGGATTCCTGATGATTTTTTGCATAATCCTGATGTTAATCTTGATGGGTCTTTTAGGCTAGTGAAAATGGAAGATGGGTTGGAGGGATTAGCTGTGGAATGTGATGAGAATTTTATGTCTGTTGTGCAAAAAAATGGTGTAAAAAGAGGGGTTTATTCTGGTGGAACAATGGAGCCACTTGAATTTCCACTTTTCCCTTCAAAGGGTTTAAGGCTGAGGAAGAAGATTGAGGATTGGTTACTGGAGTTTCAGAAACTTCCTTATGTATCTCCTTATAGTGATTTTTGTCATTTGGATCCAAATAGTGATATAGCTGAGAAAAGATTGGTGGGGTTTCTTCATGAGTTGCTTTGTTTATTTGTTGAGCATTCAGCTGAAAGGAAGAAGCTTCTGTGCCTTAAAAAGTATATGGGTTTGCCTCAAAAGGTTCATAAGGCATTTGAGAGACATCCTCATATGTTTTACTTGTCTCTAAAGAACAAGACGTGTACTGCTGTTCTTAAAGAGGCTTATTGTGATAAGTCATCTATTGAGAGGCACCCCATATTGAGAATTAGGCGAAAGTACATTAATCTGATGAAGGAATCTGAAGTGCTTTTGAAGAATAGGAGGTTTAGTAATCGTCTTGTTCGTGGAGATAATCTGGCGTTGGACTTGGATTTGGATGCTGCAGATGAAGATGGAAAAGAAATTCCCAAGTGTTGA

Protein sequence

MFINKAAAKTLQKPPHKTLLFLFHYFQNPPYSYTQKSSYVDVYMKWKKDPYYDSIEHILKSTELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMKVARFLRQYPSIFEEFTGPEYNHPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSKNRALPLKIIQGMQWYLGIPDDFLHNPDVNLDGSFRLVKMEDGLEGLAVECDENFMSVVQKNGVKRGVYSGGTMEPLEFPLFPSKGLRLRKKIEDWLLEFQKLPYVSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEHSAERKKLLCLKKYMGLPQKVHKAFERHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPILRIRRKYINLMKESEVLLKNRRFSNRLVRGDNLALDLDLDAADEDGKEIPKC

Homology

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BLAST of Sed0016810 vs. NCBI nr
Match: XP_038891886.1 (protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida] >XP_038891887.1 protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida])

HSP 1 Score: 707.6 bits (1825), Expect = 6.3e-200
Identity = 344/410 (83.90%), Postives = 369/410 (90.00%), Query Frame = 0


Query: 1   MFINKAAAKTLQKPPHKTLLFLFHYFQNPPYSYTQKSSYVDVYMKWKKDPYYDSIEHILK 60
           MF+NKAA+K LQK             QN PY++ QKS YVDVYMKWKKD YYDSIEHILK
Sbjct: 1   MFLNKAASKILQKSR-----------QNSPYTFIQKSGYVDVYMKWKKDSYYDSIEHILK 60

Query: 61  STELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMKVARFLRQYPSIFEEFTGPEYN 120
           S EL+SI+SLKNCIAQ+P+G IPISAVSKRGL+MG+S++VA FLR YPSIFEEFTG EYN
Sbjct: 61  SAELKSILSLKNCIAQDPNGCIPISAVSKRGLEMGVSIRVASFLRLYPSIFEEFTGLEYN 120

Query: 121 HPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSKNRALPLKIIQGMQWYLGIPD 180
           HPWF+LT KA EIDAEEKRVYQNCREDLICRLKKFILMSKNR LPLKIIQGMQWYLGIPD
Sbjct: 121 HPWFRLTPKAVEIDAEEKRVYQNCREDLICRLKKFILMSKNRVLPLKIIQGMQWYLGIPD 180

Query: 181 DFLHNPDVNLDGSFRLVKMEDGLEGLAVECDENFMSVVQKNGVKRGVYSGGTMEPLEFPL 240
           DFL  P+VNLDGSF+LVKMEDGLEGLAVEC+E FMSV+QKN +KRGVYSGG MEPLEFPL
Sbjct: 181 DFLQKPEVNLDGSFKLVKMEDGLEGLAVECEEKFMSVIQKNAIKRGVYSGGRMEPLEFPL 240

Query: 241 FPSKGLRLRKKIEDWLLEFQKLPYVSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEHS 300
           FPSKGLRLR+KIEDWL EFQKLPYVSPY  F H DPNSDIAEKRLVGFLHE+L LFVEHS
Sbjct: 241 FPSKGLRLRRKIEDWLNEFQKLPYVSPYEGFPHFDPNSDIAEKRLVGFLHEMLSLFVEHS 300

Query: 301 AERKKLLCLKKYMGLPQKVHKAFERHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPILR 360
           AERKKLLCLKKYMGLPQKVHKAFERHPHMFYLSLKNKTCTA+LKEAYCDKSSIERHPILR
Sbjct: 301 AERKKLLCLKKYMGLPQKVHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILR 360

Query: 361 IRRKYINLMKESEVLLKNRRFSNRLVRGDNLALDLDLDAADEDGKEIPKC 411
           IRRKYINLMKESEV+LKNRRF+N LV  +NL LDLDLDAADEDG+EIPKC
Sbjct: 361 IRRKYINLMKESEVILKNRRFNNHLVHRENLVLDLDLDAADEDGREIPKC 399

[Close]

BLAST of Sed0016810 vs. NCBI nr
Match: XP_023541928.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 687.6 bits (1773), Expect = 6.7e-194
Identity = 337/414 (81.40%), Postives = 366/414 (88.41%), Query Frame = 0


Query: 1   MFINK-AAAKTLQKPPHKTLLFLFHYFQNPPYSYTQKSSYVDVYMKWKKDPYYDSIEHIL 60
           MF+NK  A K LQK     LL L   F NPPY++TQKS YVDVYMKWKKD YYDSIEHIL
Sbjct: 1   MFLNKLPATKILQKSRKNPLLSLCFPFANPPYTFTQKSGYVDVYMKWKKDSYYDSIEHIL 60

Query: 61  KSTELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMKVARFLRQYPSIFEEFTGPEY 120
            S +L+S+IS KNCIAQ+P+G IPISAVSKRGL+MG+SM+V+RFLR YPSIFEEFTGP Y
Sbjct: 61  NSIQLKSVISFKNCIAQDPNGCIPISAVSKRGLEMGVSMRVSRFLRLYPSIFEEFTGPLY 120

Query: 121 NHPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSKNRALPLKIIQGMQWYLGIP 180
           NHPWF+LT KAAEID EEKRVYQNCREDLICRLKKFILMSKN  LPLKIIQGMQWYLGIP
Sbjct: 121 NHPWFRLTPKAAEIDEEEKRVYQNCREDLICRLKKFILMSKNNVLPLKIIQGMQWYLGIP 180

Query: 181 DDFLHNPDVNLDGSFRLVKMEDGLEGLAVECDENFMSVVQKNGVKRGVYSGGTMEPLEFP 240
           D+FL NP+VNLDGSF+LV MED LEGLAVECDE FMSV+QKN +K+GVYS GTME LEFP
Sbjct: 181 DEFLQNPEVNLDGSFKLVTMEDKLEGLAVECDEKFMSVMQKNAIKKGVYSCGTMEALEFP 240

Query: 241 LFPSKGLRLRKKIEDWLLEFQKLPYVSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEH 300
           LFPSKGLRLR+KIEDWL+EFQKLPYVSPY DF HLDPNSDI+EKRLVGFLHELL LFVEH
Sbjct: 241 LFPSKGLRLRRKIEDWLMEFQKLPYVSPYEDFSHLDPNSDISEKRLVGFLHELLSLFVEH 300

Query: 301 SAERKKLLCLKKYMGLPQKVHKAFERHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPIL 360
           SAERKKLLCLKK+MGLPQKVHKAFERHPHMFYLSL+NKTCTA+LKEAYCDK+SIERHPIL
Sbjct: 301 SAERKKLLCLKKHMGLPQKVHKAFERHPHMFYLSLRNKTCTAILKEAYCDKASIERHPIL 360

Query: 361 RIRRKYINLMKESEVLLKNRRFSNRLVRGDNLA---LDLDLDAADEDGKEIPKC 411
           RIRRKYINLMKESEV+LKNRRF N L   + L    LDLDLDAAD D +EIPKC
Sbjct: 361 RIRRKYINLMKESEVILKNRRFGNGLAHREGLVDLDLDLDLDAADGDQREIPKC 414

[Close]

BLAST of Sed0016810 vs. NCBI nr
Match: XP_022945306.1 (protein WHAT'S THIS FACTOR 1 [Cucurbita moschata])

HSP 1 Score: 684.9 bits (1766), Expect = 4.3e-193
Identity = 336/411 (81.75%), Postives = 366/411 (89.05%), Query Frame = 0


Query: 1   MFINK-AAAKTLQKPPHKTLLFLFHYFQNPPYSYTQKSSYVDVYMKWKKDPYYDSIEHIL 60
           MF+NK  A+K LQK     L  L   F NPPY++TQKS YVDVYMKWKKD YYDSIEHIL
Sbjct: 1   MFLNKLPASKILQKSRQNPLQSLCFPFANPPYTFTQKSGYVDVYMKWKKDSYYDSIEHIL 60

Query: 61  KSTELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMKVARFLRQYPSIFEEFTGPEY 120
            S +L+SIIS KNCIAQ+P+G IPISAVSKRGL+MG+SM+V+RFLR YPSIFEEFTGP Y
Sbjct: 61  NSIQLKSIISFKNCIAQDPNGCIPISAVSKRGLEMGVSMRVSRFLRLYPSIFEEFTGPLY 120

Query: 121 NHPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSKNRALPLKIIQGMQWYLGIP 180
           NHPWF+LT KAAEID EEKRVYQNCREDLICRLKKFILMSKN  LPLKIIQGMQWYLGIP
Sbjct: 121 NHPWFRLTPKAAEIDEEEKRVYQNCREDLICRLKKFILMSKNNVLPLKIIQGMQWYLGIP 180

Query: 181 DDFLHNPDVNLDGSFRLVKMEDGLEGLAVECDENFMSVVQKNGVKRGVYSGGTMEPLEFP 240
           D+FL NP+VNLDGSF+LV MED LEGLAVECDE FMSV+QKN +K+GVYS GTME LEFP
Sbjct: 181 DEFLQNPEVNLDGSFKLVTMEDKLEGLAVECDEKFMSVMQKNAIKKGVYSCGTMEALEFP 240

Query: 241 LFPSKGLRLRKKIEDWLLEFQKLPYVSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEH 300
           LFPSKGLRLR+KIEDWL+EFQKLPYVSPY DF HLDPNSDI+EKRLVGFLHELL LFVEH
Sbjct: 241 LFPSKGLRLRRKIEDWLMEFQKLPYVSPYEDFSHLDPNSDISEKRLVGFLHELLSLFVEH 300

Query: 301 SAERKKLLCLKKYMGLPQKVHKAFERHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPIL 360
           SAERKKLLCLKK+MGLPQKVHKAFERHPHMFYLSL+NKTCTA+LKEAYCDK+SIERHPIL
Sbjct: 301 SAERKKLLCLKKHMGLPQKVHKAFERHPHMFYLSLRNKTCTAILKEAYCDKASIERHPIL 360

Query: 361 RIRRKYINLMKESEVLLKNRRFSNRLVRGDNLALDLDLDAADEDGKEIPKC 411
           RIRRKYINLMKESEV+LKNRRF N L   + L +DLDLDAAD D +EIPKC
Sbjct: 361 RIRRKYINLMKESEVILKNRRFGNGLAHREVL-VDLDLDAADGDEREIPKC 410

[Close]

BLAST of Sed0016810 vs. NCBI nr
Match: KAG7012909.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 681.4 bits (1757), Expect = 4.8e-192
Identity = 334/410 (81.46%), Postives = 365/410 (89.02%), Query Frame = 0


Query: 1   MFINK-AAAKTLQKPPHKTLLFLFHYFQNPPYSYTQKSSYVDVYMKWKKDPYYDSIEHIL 60
           MF+NK  A+K LQK     LL L   F NPPY++TQKS YVDVYMKWKKD YYDSIEHIL
Sbjct: 1   MFLNKLPASKILQKSRQNPLLSLCFPFANPPYTFTQKSGYVDVYMKWKKDSYYDSIEHIL 60

Query: 61  KSTELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMKVARFLRQYPSIFEEFTGPEY 120
            S +L+SIIS KNCIAQ+P+G IPISAVSKRGL+MG+S++V+RFLR YPSIFEEFTGP Y
Sbjct: 61  NSIQLKSIISFKNCIAQDPNGCIPISAVSKRGLEMGVSIRVSRFLRLYPSIFEEFTGPLY 120

Query: 121 NHPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSKNRALPLKIIQGMQWYLGIP 180
           NHPWF+LT KAAEID EEKRVYQNCREDLICRLKKFILMSKN  LPLKIIQGMQWYLGIP
Sbjct: 121 NHPWFRLTPKAAEIDEEEKRVYQNCREDLICRLKKFILMSKNNVLPLKIIQGMQWYLGIP 180

Query: 181 DDFLHNPDVNLDGSFRLVKMEDGLEGLAVECDENFMSVVQKNGVKRGVYSGGTMEPLEFP 240
           D+FL NP+VNLDGSF+LV MED LEGLAVECDE FMS +QKN +K+GVYS GTME LEFP
Sbjct: 181 DEFLQNPEVNLDGSFKLVTMEDKLEGLAVECDEKFMSAMQKNAIKKGVYSCGTMEALEFP 240

Query: 241 LFPSKGLRLRKKIEDWLLEFQKLPYVSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEH 300
           LFPSKGLRLR+KIEDWL+EFQKLPYVSPY DF HLDPNSDI+EKRLVGFLHELL LFVEH
Sbjct: 241 LFPSKGLRLRRKIEDWLMEFQKLPYVSPYEDFSHLDPNSDISEKRLVGFLHELLSLFVEH 300

Query: 301 SAERKKLLCLKKYMGLPQKVHKAFERHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPIL 360
           SAERKKLLCLKK+MGLPQKVHKAFERHPHMFYLSL+NKTCTA+LKEAYCDK+SIERHPIL
Sbjct: 301 SAERKKLLCLKKHMGLPQKVHKAFERHPHMFYLSLRNKTCTAILKEAYCDKASIERHPIL 360

Query: 361 RIRRKYINLMKESEVLLKNRRFSNRLVRGDNLALDLDLDAADEDGKEIPK 410
           RIRRKYINLMKESEV+LKNRRF N L   + L +DLDLDAAD D +EIPK
Sbjct: 361 RIRRKYINLMKESEVILKNRRFGNGLAHPEGL-VDLDLDAADGDEREIPK 409

[Close]

BLAST of Sed0016810 vs. NCBI nr
Match: XP_004142494.1 (protein WHAT'S THIS FACTOR 9, mitochondrial [Cucumis sativus] >XP_031741340.1 protein WHAT'S THIS FACTOR 9, mitochondrial [Cucumis sativus] >KGN52254.1 hypothetical protein Csa_008003 [Cucumis sativus])

HSP 1 Score: 677.9 bits (1748), Expect = 5.3e-191
Identity = 330/410 (80.49%), Postives = 358/410 (87.32%), Query Frame = 0


Query: 1   MFINKAAAKTLQKPPHKTLLFLFHYFQNPPYSYTQKSSYVDVYMKWKKDPYYDSIEHILK 60
           MF+N AA+K LQK   K+           P+++ QK  YVDVYMKWKKD YYDSIEHI K
Sbjct: 1   MFLNTAASKILQKGRQKS-----------PFAFIQKFGYVDVYMKWKKDSYYDSIEHITK 60

Query: 61  STELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMKVARFLRQYPSIFEEFTGPEYN 120
           S EL+SIISLKNCIAQ+P+G IPISAVSKRGL+MG+SMKVARFLR YPSIFEEFTGPEYN
Sbjct: 61  SIELKSIISLKNCIAQDPNGCIPISAVSKRGLEMGVSMKVARFLRLYPSIFEEFTGPEYN 120

Query: 121 HPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSKNRALPLKIIQGMQWYLGIPD 180
           HPWF+LT KA EIDAEEK+ YQNCREDLICRLKKFILMSKN  LPLKII+GMQWYLGIPD
Sbjct: 121 HPWFRLTPKAVEIDAEEKKTYQNCREDLICRLKKFILMSKNNVLPLKIIRGMQWYLGIPD 180

Query: 181 DFLHNPDVNLDGSFRLVKMEDGLEGLAVECDENFMSVVQKNGVKRGVYSGGTMEPLEFPL 240
           D L  PDVNLDGSF+LVKMEDGLEGL+VEC+E  MSV+QKN +KRGVYSG TME LEFPL
Sbjct: 181 DLLQKPDVNLDGSFKLVKMEDGLEGLSVECEEKLMSVIQKNAIKRGVYSGRTMESLEFPL 240

Query: 241 FPSKGLRLRKKIEDWLLEFQKLPYVSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEHS 300
           FPSKGLRLR+KIEDWL EFQKLPYVSPY +F HLDPNSDIAEKRLVGF+HE+L LFVEHS
Sbjct: 241 FPSKGLRLRRKIEDWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHS 300

Query: 301 AERKKLLCLKKYMGLPQKVHKAFERHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPILR 360
            ERKKLLCLKKYMGLPQK HKAFERHPHMFYLSLKNKTCTA+LKEAYCDKSSIERHPILR
Sbjct: 301 TERKKLLCLKKYMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILR 360

Query: 361 IRRKYINLMKESEVLLKNRRFSNRLVRGDNLALDLDLDAADEDGKEIPKC 411
           IRRKYI+LMKES V+LKNRRFSN LV G+N  LD DLD A  DG+EIPKC
Sbjct: 361 IRRKYIHLMKESAVILKNRRFSNHLVHGENSVLDFDLDTA--DGREIPKC 397

[Close]

BLAST of Sed0016810 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 2.6e-140
Identity = 243/369 (65.85%), Postives = 300/369 (81.30%), Query Frame = 0


Query: 34  TQKSSYVDVYMKWKKDPYYDSIEHILKSTELQSIISLKNCIAQNPDGSIPISAVSKRGLQ 93
           TQK +YVDVYMKWK+DPY+D+IEHIL+S++L+S++SLKNCI Q P+  IPISA+SK+  Q
Sbjct: 19  TQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQ 78

Query: 94  MGLSMKVARFLRQYPSIFEEFTGPEYNHPWFKLTQKAAEIDAEEKRVYQNCREDLICRLK 153
             +S K+A FLR++PSIFEEF GPEYN PWF+LT +A E+D +E+ VYQ   +DL  RLK
Sbjct: 79  FDVSTKIAHFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLK 138

Query: 154 KFILMSKNRALPLKIIQGMQWYLGIPDDFLHNPDVNLDGSFRLVKMEDGLEGLAVECD-- 213
           K ILMSK+  LPL I+QGM+WYLG+PDD+L  PD+NLD SFR V MEDG++GLAV+ +  
Sbjct: 139 KLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGG 198

Query: 214 ENFMSVVQKNGVK--RGVYSGGTMEPLEFPLFPSKGLRLRKKIEDWLLEFQKLPYVSPYS 273
           +  +SV+QKN +K  RG  S   +E +EFPLFPSKG RLR KIEDWL+EFQKLPYVSPY 
Sbjct: 199 DKVLSVLQKNAMKKRRGEVS---LEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYD 258

Query: 274 DFCHLDPNSDIAEKRLVGFLHELLCLFVEHSAERKKLLCLKKYMGLPQKVHKAFERHPHM 333
           D+  LDP+SDIAEKR+VGFLHELLCLFVEHSAERKKLLCLKK+ GLPQKVHKAFERHP +
Sbjct: 259 DYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQI 318

Query: 334 FYLSLKNKTCTAVLKEAYCDKSSIERHPILRIRRKYINLMKESEVLLKNRRFSNRLVRGD 393
           FYLS+KNKTCTA+L+E Y DK+S+E HP+L +R+KYI LMK SE++LK+RR S       
Sbjct: 319 FYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNSFGFRDEG 378

Query: 394 NLALDLDLD 399
            +  DLDLD
Sbjct: 379 VVDKDLDLD 384

[Close]

BLAST of Sed0016810 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 3.9e-27
Identity = 84/330 (25.45%), Postives = 162/330 (49.09%), Query Frame = 0


Query: 44  MKWKKDPYYDSIEHILKSTELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMK--VA 103
           +K +K+  +D++  I +  +L+ ++ L+N +   PD  + +  + +    +GL+ K  + 
Sbjct: 55  VKRRKEAPFDTV--IQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLI 114

Query: 104 RFLRQYPSIFEEFTGPEYNHPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSKN 163
             LR++P +F+      Y+   F+LT  A  +  +E R+        + +L+K ++MS+ 
Sbjct: 115 ALLRRFPGVFDVVEEGVYSLR-FRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQE 174

Query: 164 RALPLKIIQGMQWYLGIPDDFLHNPDVNLDGSFRLVKMEDG----LEGLAVECDENFMSV 223
           + + ++ +  ++  LG+P +F     +     FR+V+M+ G    L     E   +   +
Sbjct: 175 KRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDPELAVSAAEL 234

Query: 224 VQKNGVKRGVYSGGTM--EPLEF-PLFPSKGLRLRKKIEDWLLEFQKLPYVSPYSDFCHL 283
            ++    R       +   PL+F  +   KGL+L +     +  F+++PY+SPY+DF HL
Sbjct: 235 AEEESRAREAEERNLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYADFSHL 294

Query: 284 DPNSDIAEKRLVGFLHELLCLFVEHSAERKKLLCLKKYMGLPQKVHKAFERHPHMFYLSL 343
              SD  EK   G +HE+L L VE       L   ++     Q +     RHP MFY+S 
Sbjct: 295 RSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYVSF 354

Query: 344 KNKTCTAVLKEAYCDKSSIERHPILRIRRK 365
           K    +  L+EAY D   +E++ ++ ++ K
Sbjct: 355 KGDRDSVFLREAYKDSQLVEKNQLVLLKEK 381

[Close]

BLAST of Sed0016810 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 4.3e-26
Identity = 96/378 (25.40%), Postives = 173/378 (45.77%), Query Frame = 0


Query: 44  MKWKKDPYYDSIEHILKSTELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMKVARF 103
           +K +K+  +DS+  + +  +L+ +++++  +   PD  + +  + K    +GL  K  RF
Sbjct: 76  VKRRKELTFDSV--VQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLK-KRRRF 135

Query: 104 ---LRQYPSIFEEFTGPEYNHPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSK 163
              LR+YP +FE      Y+   FK+T +A  +  +E R+     + L+ +L+K ++MS 
Sbjct: 136 IALLRKYPGVFEIVEEGAYSLR-FKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSI 195

Query: 164 NRALPLKIIQGMQWYLGIPDDFLHNPDVNLDGSFRLVKMEDG-----------LEGLAVE 223
           ++ + L+ I  ++  LG+P +F           FR+V    G           L   A E
Sbjct: 196 DKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAE 255

Query: 224 CDENFMSVVQKNGVKRGVYSGGTMEPLEFPLFPSKGLRLRKKIEDWLLEFQKLPYVSPYS 283
             E+     +       +        ++ P    +GL L K     + +F+ + Y+SPY 
Sbjct: 256 LSEDDNRTRESEERNLIIDRPPKFNRVKLP----RGLNLSKSETRKISQFRDMQYISPYK 315

Query: 284 DFCHLDPNSDIAEKRLVGFLHELLCLFVEHSAERKKLLCLKKYMGLPQKVHKAFERHPHM 343
           DF HL   +   EK   G +HELL L  E       L   ++     Q++     RHP +
Sbjct: 316 DFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDL 375

Query: 344 FYLSLKNKTCTAVLKEAYCDKSSIERHPILRIRRKYINLMKESEVLLKNRRFSNR-LVRG 403
           FY+SLK +  +  L+EAY +   I++ P+  ++ K          L+   RF  R   R 
Sbjct: 376 FYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEK-------MRALVSVPRFPRRGGPRK 435

Query: 404 DNLALDLDLDAADEDGKE 407
           D    ++++D +D DG+E
Sbjct: 436 DEEGREVEIDGSDADGEE 438

[Close]

BLAST of Sed0016810 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.6e-25
Identity = 85/331 (25.68%), Postives = 164/331 (49.55%), Query Frame = 0


Query: 44  MKWKKDPYYDSIEHILKSTELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMK--VA 103
           +K +K+  +D++  I +  +L+ ++ L+N +  NPD  + +  + +    +GL+ K  + 
Sbjct: 61  VKRRKEIPFDNV--IQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLI 120

Query: 104 RFLRQYPSIFEEFTGPEYNHPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSKN 163
             L+++P +FE      Y+   F+LT  A  +  +E  +        + +L+K ++MS++
Sbjct: 121 ALLKRFPGVFEVVEEGVYSLR-FRLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQD 180

Query: 164 RALPLKIIQGMQWYLGIPDDFLHNPDVNLDGSFRLVKMEDGLEGLAV-----ECDENFMS 223
           + + ++ I  ++  LG+P +F     +     FR+V+M+ G  GL +     E   +   
Sbjct: 181 KRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRG-PGLELTHWDPELAVSAAE 240

Query: 224 VVQKNGVKRGVYSGGTM--EPLEFPLFP-SKGLRLRKKIEDWLLEFQKLPYVSPYSDFCH 283
           V ++    R       +   PL+F      +GL+L +     + +F+++PY+SPYSDF H
Sbjct: 241 VAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFSH 300

Query: 284 LDPNSDIAEKRLVGFLHELLCLFVEHSAERKKLLCLKKYMGLPQKVHKAFERHPHMFYLS 343
           L   S   EK   G +HE+L L +E       L   ++     Q +     RHP MFY+S
Sbjct: 301 LRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYVS 360

Query: 344 LKNKTCTAVLKEAYCDKSSIERHPILRIRRK 365
           LK    +  L+EAY +   +E+  ++ ++ K
Sbjct: 361 LKGDRDSVFLREAYKNSQLVEKSKLVLLKEK 387

[Close]

BLAST of Sed0016810 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 7.6e-23
Identity = 91/339 (26.84%), Postives = 159/339 (46.90%), Query Frame = 0


Query: 48  KDPYYDSIEHILKSTELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMK---VARFL 107
           +D  YD+   + K  +++ ++   + I   P+ +I IS +     ++GL  K      FL
Sbjct: 48  RDHGYDNYMEVEK--KIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFL 107

Query: 108 RQYPSIFEEFTGPEYNHPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSKNRAL 167
            ++P +FE +  P     + +LT+KA +    E     +   D + RL+K ++MS    +
Sbjct: 108 LKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTGRI 167

Query: 168 PLKIIQGMQWYLGIPDDFLHNPDVNLDGSFRLVKMEDGLEGL--AVECDENFMSVVQKNG 227
            L+ ++  +   G+P+DF ++  +     FRL+  E+  +     VE D N +S+     
Sbjct: 168 RLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPN-LSICAIER 227

Query: 228 VKRGVY--SGGTMEPLEFPL---FPSKGLRLRKKIEDWLLEFQKLPYVSPYSDFCHLDPN 287
           V+   Y   G   E + F     FP  G ++ K     + ++Q+LPY SPY D    D  
Sbjct: 228 VREIEYRTKGIDAEDVRFSFVVNFP-PGFKIGKYFRIAVWKWQRLPYWSPYEDISGYDLR 287

Query: 288 SDIA----EKRLVGFLHELLCLFVEHSAERKKLLCLKKYMGLPQKVHKAFERHPHMFYLS 347
           S  A    EKR V  +HELL L VE     +++   +  M LP+K+ +   +H  +FY+S
Sbjct: 288 SMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYIS 347

Query: 348 LK---NKTCTAVLKEAYCDKSSIERHPILRIRRKYINLM 370
            +    K  T  L+E Y     +E + +   RR+   L+
Sbjct: 348 TRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELV 382

[Close]

BLAST of Sed0016810 vs. ExPASy TrEMBL
Match: A0A6J1G0H3 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111449585 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 2.1e-193
Identity = 336/411 (81.75%), Postives = 366/411 (89.05%), Query Frame = 0


Query: 1   MFINK-AAAKTLQKPPHKTLLFLFHYFQNPPYSYTQKSSYVDVYMKWKKDPYYDSIEHIL 60
           MF+NK  A+K LQK     L  L   F NPPY++TQKS YVDVYMKWKKD YYDSIEHIL
Sbjct: 1   MFLNKLPASKILQKSRQNPLQSLCFPFANPPYTFTQKSGYVDVYMKWKKDSYYDSIEHIL 60

Query: 61  KSTELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMKVARFLRQYPSIFEEFTGPEY 120
            S +L+SIIS KNCIAQ+P+G IPISAVSKRGL+MG+SM+V+RFLR YPSIFEEFTGP Y
Sbjct: 61  NSIQLKSIISFKNCIAQDPNGCIPISAVSKRGLEMGVSMRVSRFLRLYPSIFEEFTGPLY 120

Query: 121 NHPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSKNRALPLKIIQGMQWYLGIP 180
           NHPWF+LT KAAEID EEKRVYQNCREDLICRLKKFILMSKN  LPLKIIQGMQWYLGIP
Sbjct: 121 NHPWFRLTPKAAEIDEEEKRVYQNCREDLICRLKKFILMSKNNVLPLKIIQGMQWYLGIP 180

Query: 181 DDFLHNPDVNLDGSFRLVKMEDGLEGLAVECDENFMSVVQKNGVKRGVYSGGTMEPLEFP 240
           D+FL NP+VNLDGSF+LV MED LEGLAVECDE FMSV+QKN +K+GVYS GTME LEFP
Sbjct: 181 DEFLQNPEVNLDGSFKLVTMEDKLEGLAVECDEKFMSVMQKNAIKKGVYSCGTMEALEFP 240

Query: 241 LFPSKGLRLRKKIEDWLLEFQKLPYVSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEH 300
           LFPSKGLRLR+KIEDWL+EFQKLPYVSPY DF HLDPNSDI+EKRLVGFLHELL LFVEH
Sbjct: 241 LFPSKGLRLRRKIEDWLMEFQKLPYVSPYEDFSHLDPNSDISEKRLVGFLHELLSLFVEH 300

Query: 301 SAERKKLLCLKKYMGLPQKVHKAFERHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPIL 360
           SAERKKLLCLKK+MGLPQKVHKAFERHPHMFYLSL+NKTCTA+LKEAYCDK+SIERHPIL
Sbjct: 301 SAERKKLLCLKKHMGLPQKVHKAFERHPHMFYLSLRNKTCTAILKEAYCDKASIERHPIL 360

Query: 361 RIRRKYINLMKESEVLLKNRRFSNRLVRGDNLALDLDLDAADEDGKEIPKC 411
           RIRRKYINLMKESEV+LKNRRF N L   + L +DLDLDAAD D +EIPKC
Sbjct: 361 RIRRKYINLMKESEVILKNRRFGNGLAHREVL-VDLDLDAADGDEREIPKC 410

[Close]

BLAST of Sed0016810 vs. ExPASy TrEMBL
Match: A0A0A0KTJ8 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G622690 PE=4 SV=1)

HSP 1 Score: 677.9 bits (1748), Expect = 2.6e-191
Identity = 330/410 (80.49%), Postives = 358/410 (87.32%), Query Frame = 0


Query: 1   MFINKAAAKTLQKPPHKTLLFLFHYFQNPPYSYTQKSSYVDVYMKWKKDPYYDSIEHILK 60
           MF+N AA+K LQK   K+           P+++ QK  YVDVYMKWKKD YYDSIEHI K
Sbjct: 1   MFLNTAASKILQKGRQKS-----------PFAFIQKFGYVDVYMKWKKDSYYDSIEHITK 60

Query: 61  STELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMKVARFLRQYPSIFEEFTGPEYN 120
           S EL+SIISLKNCIAQ+P+G IPISAVSKRGL+MG+SMKVARFLR YPSIFEEFTGPEYN
Sbjct: 61  SIELKSIISLKNCIAQDPNGCIPISAVSKRGLEMGVSMKVARFLRLYPSIFEEFTGPEYN 120

Query: 121 HPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSKNRALPLKIIQGMQWYLGIPD 180
           HPWF+LT KA EIDAEEK+ YQNCREDLICRLKKFILMSKN  LPLKII+GMQWYLGIPD
Sbjct: 121 HPWFRLTPKAVEIDAEEKKTYQNCREDLICRLKKFILMSKNNVLPLKIIRGMQWYLGIPD 180

Query: 181 DFLHNPDVNLDGSFRLVKMEDGLEGLAVECDENFMSVVQKNGVKRGVYSGGTMEPLEFPL 240
           D L  PDVNLDGSF+LVKMEDGLEGL+VEC+E  MSV+QKN +KRGVYSG TME LEFPL
Sbjct: 181 DLLQKPDVNLDGSFKLVKMEDGLEGLSVECEEKLMSVIQKNAIKRGVYSGRTMESLEFPL 240

Query: 241 FPSKGLRLRKKIEDWLLEFQKLPYVSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEHS 300
           FPSKGLRLR+KIEDWL EFQKLPYVSPY +F HLDPNSDIAEKRLVGF+HE+L LFVEHS
Sbjct: 241 FPSKGLRLRRKIEDWLKEFQKLPYVSPYEEFSHLDPNSDIAEKRLVGFIHEMLSLFVEHS 300

Query: 301 AERKKLLCLKKYMGLPQKVHKAFERHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPILR 360
            ERKKLLCLKKYMGLPQK HKAFERHPHMFYLSLKNKTCTA+LKEAYCDKSSIERHPILR
Sbjct: 301 TERKKLLCLKKYMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILR 360

Query: 361 IRRKYINLMKESEVLLKNRRFSNRLVRGDNLALDLDLDAADEDGKEIPKC 411
           IRRKYI+LMKES V+LKNRRFSN LV G+N  LD DLD A  DG+EIPKC
Sbjct: 361 IRRKYIHLMKESAVILKNRRFSNHLVHGENSVLDFDLDTA--DGREIPKC 397

[Close]

BLAST of Sed0016810 vs. ExPASy TrEMBL
Match: A0A6J1HPK9 (protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111466548 PE=4 SV=1)

HSP 1 Score: 677.6 bits (1747), Expect = 3.4e-191
Identity = 332/411 (80.78%), Postives = 365/411 (88.81%), Query Frame = 0


Query: 1   MFINK-AAAKTLQKPPHKTLLFLFHYFQNPPYSYTQKSSYVDVYMKWKKDPYYDSIEHIL 60
           MF+NK  A+K LQK   K L F      N PY++TQKS YVDVYMKWKKD YYDSIEHIL
Sbjct: 1   MFLNKLPASKILQKSRQKPLCF---PLANLPYTFTQKSGYVDVYMKWKKDSYYDSIEHIL 60

Query: 61  KSTELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMKVARFLRQYPSIFEEFTGPEY 120
            S  L+SIIS KNCIAQ+P+G IPISAVSKRGL+MG+S++V+RFLR YPSIFEEFTGP+Y
Sbjct: 61  NSIHLKSIISFKNCIAQDPNGCIPISAVSKRGLEMGVSIRVSRFLRLYPSIFEEFTGPQY 120

Query: 121 NHPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSKNRALPLKIIQGMQWYLGIP 180
           NHPWF+LT KAAEID EEKRVYQNCREDLICRLKKFILMSKN  LPLKIIQGMQWYLGIP
Sbjct: 121 NHPWFRLTPKAAEIDEEEKRVYQNCREDLICRLKKFILMSKNNVLPLKIIQGMQWYLGIP 180

Query: 181 DDFLHNPDVNLDGSFRLVKMEDGLEGLAVECDENFMSVVQKNGVKRGVYSGGTMEPLEFP 240
           D+FLHNP VNLDGSF+LV MED LEGLAVECDE FMSV+QKN +K+GVYS GTME LEFP
Sbjct: 181 DEFLHNPKVNLDGSFKLVTMEDKLEGLAVECDEKFMSVMQKNAIKKGVYSCGTMEALEFP 240

Query: 241 LFPSKGLRLRKKIEDWLLEFQKLPYVSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEH 300
           LFPSKGLRLR+KIEDWL+EFQKLPYVSPY DF HLDPNSDI+EKRLVGFLHELL LFVEH
Sbjct: 241 LFPSKGLRLRRKIEDWLMEFQKLPYVSPYEDFSHLDPNSDISEKRLVGFLHELLSLFVEH 300

Query: 301 SAERKKLLCLKKYMGLPQKVHKAFERHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPIL 360
           SAER+KLLCLKK+MGLPQKVHKAFERHPHMFYLSL+NKTCTA+LK+AYCDK+SIERHPIL
Sbjct: 301 SAERRKLLCLKKHMGLPQKVHKAFERHPHMFYLSLRNKTCTAILKQAYCDKTSIERHPIL 360

Query: 361 RIRRKYINLMKESEVLLKNRRFSNRLVRGDNLALDLDLDAADEDGKEIPKC 411
           RIRRKYINLMKESEV+LKNRRF N L   + L +DLDLDAAD D +EIP+C
Sbjct: 361 RIRRKYINLMKESEVILKNRRFGNGLAHREGL-VDLDLDAADGDEREIPEC 407

[Close]

BLAST of Sed0016810 vs. ExPASy TrEMBL
Match: A0A1S4DW88 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103489450 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 1.4e-189
Identity = 332/410 (80.98%), Postives = 355/410 (86.59%), Query Frame = 0


Query: 1   MFINKAAAKTLQKPPHKTLLFLFHYFQNPPYSYTQKSSYVDVYMKWKKDPYYDSIEHILK 60
           MF+N AA+K LQK   K+  F+            QK  YVDVYMKWKKD YYDSIEHI K
Sbjct: 1   MFLNTAASKILQKCRQKSPFFI------------QKFGYVDVYMKWKKDSYYDSIEHITK 60

Query: 61  STELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMKVARFLRQYPSIFEEFTGPEYN 120
           S EL+SIISLKNCIAQ+P+G IPISAVSKRGLQM +SMKVARFLR YPSIFEEFTGPE+N
Sbjct: 61  SIELKSIISLKNCIAQDPNGCIPISAVSKRGLQMDISMKVARFLRLYPSIFEEFTGPEHN 120

Query: 121 HPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSKNRALPLKIIQGMQWYLGIPD 180
           HPWF+LT KA EIDAEEK  YQNCREDLICRLKKFILMSKN  LPLKIIQGMQWYLGIPD
Sbjct: 121 HPWFRLTPKAVEIDAEEKMSYQNCREDLICRLKKFILMSKNNVLPLKIIQGMQWYLGIPD 180

Query: 181 DFLHNPDVNLDGSFRLVKMEDGLEGLAVECDENFMSVVQKNGVKRGVYSGGTMEPLEFPL 240
           DFL  P+VNLDGSF+LVKMEDGLEGL+VEC+E FMS +QKN +KRGVYSG TME LEFPL
Sbjct: 181 DFLQKPEVNLDGSFKLVKMEDGLEGLSVECEEKFMSAIQKNAIKRGVYSGRTMELLEFPL 240

Query: 241 FPSKGLRLRKKIEDWLLEFQKLPYVSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEHS 300
           FPSKGLRLR+KIEDWL EFQKLPYVSPY DF HLDPNSDIAEKRLVGF+HE+L LFVEHS
Sbjct: 241 FPSKGLRLRRKIEDWLKEFQKLPYVSPYEDFSHLDPNSDIAEKRLVGFIHEMLSLFVEHS 300

Query: 301 AERKKLLCLKKYMGLPQKVHKAFERHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPILR 360
           AERKKLLCLKKYMGLPQK HKAFERHPHMFYLSLKNKTCTA+LKEAYCDKSSIERHPILR
Sbjct: 301 AERKKLLCLKKYMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILR 360

Query: 361 IRRKYINLMKESEVLLKNRRFSNRLVRGDNLALDLDLDAADEDGKEIPKC 411
           IRRKYINLMKES V+LKNRR SN LV  +N  LD DLDAA  DG+EIPKC
Sbjct: 361 IRRKYINLMKESIVILKNRRLSNHLVHRENSVLDFDLDAA--DGREIPKC 396

[Close]

BLAST of Sed0016810 vs. ExPASy TrEMBL
Match: A0A5D3CD59 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002550 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 1.4e-189
Identity = 332/410 (80.98%), Postives = 355/410 (86.59%), Query Frame = 0


Query: 1   MFINKAAAKTLQKPPHKTLLFLFHYFQNPPYSYTQKSSYVDVYMKWKKDPYYDSIEHILK 60
           MF+N AA+K LQK   K+  F+            QK  YVDVYMKWKKD YYDSIEHI K
Sbjct: 1   MFLNTAASKILQKCRQKSPFFI------------QKFGYVDVYMKWKKDSYYDSIEHITK 60

Query: 61  STELQSIISLKNCIAQNPDGSIPISAVSKRGLQMGLSMKVARFLRQYPSIFEEFTGPEYN 120
           S EL+SIISLKNCIAQ+P+G IPISAVSKRGLQM +SMKVARFLR YPSIFEEFTGPE+N
Sbjct: 61  SIELKSIISLKNCIAQDPNGCIPISAVSKRGLQMDISMKVARFLRLYPSIFEEFTGPEHN 120

Query: 121 HPWFKLTQKAAEIDAEEKRVYQNCREDLICRLKKFILMSKNRALPLKIIQGMQWYLGIPD 180
           HPWF+LT KA EIDAEEK  YQNCREDLICRLKKFILMSKN  LPLKIIQGMQWYLGIPD
Sbjct: 121 HPWFRLTPKAVEIDAEEKMSYQNCREDLICRLKKFILMSKNNVLPLKIIQGMQWYLGIPD 180

Query: 181 DFLHNPDVNLDGSFRLVKMEDGLEGLAVECDENFMSVVQKNGVKRGVYSGGTMEPLEFPL 240
           DFL  P+VNLDGSF+LVKMEDGLEGL+VEC+E FMS +QKN +KRGVYSG TME LEFPL
Sbjct: 181 DFLQKPEVNLDGSFKLVKMEDGLEGLSVECEEKFMSAIQKNAIKRGVYSGRTMELLEFPL 240

Query: 241 FPSKGLRLRKKIEDWLLEFQKLPYVSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEHS 300
           FPSKGLRLR+KIEDWL EFQKLPYVSPY DF HLDPNSDIAEKRLVGF+HE+L LFVEHS
Sbjct: 241 FPSKGLRLRRKIEDWLKEFQKLPYVSPYEDFSHLDPNSDIAEKRLVGFIHEMLSLFVEHS 300

Query: 301 AERKKLLCLKKYMGLPQKVHKAFERHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPILR 360
           AERKKLLCLKKYMGLPQK HKAFERHPHMFYLSLKNKTCTA+LKEAYCDKSSIERHPILR
Sbjct: 301 AERKKLLCLKKYMGLPQKFHKAFERHPHMFYLSLKNKTCTAILKEAYCDKSSIERHPILR 360

Query: 361 IRRKYINLMKESEVLLKNRRFSNRLVRGDNLALDLDLDAADEDGKEIPKC 411
           IRRKYINLMKES V+LKNRR SN LV  +N  LD DLDAA  DG+EIPKC
Sbjct: 361 IRRKYINLMKESIVILKNRRLSNHLVHRENSVLDFDLDAA--DGREIPKC 396

[Close]

BLAST of Sed0016810 vs. TAIR 10
Match: AT2G39120.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 500.0 bits (1286), Expect = 1.8e-141
Identity = 243/369 (65.85%), Postives = 300/369 (81.30%), Query Frame = 0


Query: 34  TQKSSYVDVYMKWKKDPYYDSIEHILKSTELQSIISLKNCIAQNPDGSIPISAVSKRGLQ 93
           TQK +YVDVYMKWK+DPY+D+IEHIL+S++L+S++SLKNCI Q P+  IPISA+SK+  Q
Sbjct: 19  TQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQ 78

Query: 94  MGLSMKVARFLRQYPSIFEEFTGPEYNHPWFKLTQKAAEIDAEEKRVYQNCREDLICRLK 153
             +S K+A FLR++PSIFEEF GPEYN PWF+LT +A E+D +E+ VYQ   +DL  RLK
Sbjct: 79  FDVSTKIAHFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLK 138

Query: 154 KFILMSKNRALPLKIIQGMQWYLGIPDDFLHNPDVNLDGSFRLVKMEDGLEGLAVECD-- 213
           K ILMSK+  LPL I+QGM+WYLG+PDD+L  PD+NLD SFR V MEDG++GLAV+ +  
Sbjct: 139 KLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGG 198

Query: 214 ENFMSVVQKNGVK--RGVYSGGTMEPLEFPLFPSKGLRLRKKIEDWLLEFQKLPYVSPYS 273
           +  +SV+QKN +K  RG  S   +E +EFPLFPSKG RLR KIEDWL+EFQKLPYVSPY 
Sbjct: 199 DKVLSVLQKNAMKKRRGEVS---LEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYD 258

Query: 274 DFCHLDPNSDIAEKRLVGFLHELLCLFVEHSAERKKLLCLKKYMGLPQKVHKAFERHPHM 333
           D+  LDP+SDIAEKR+VGFLHELLCLFVEHSAERKKLLCLKK+ GLPQKVHKAFERHP +
Sbjct: 259 DYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQI 318

Query: 334 FYLSLKNKTCTAVLKEAYCDKSSIERHPILRIRRKYINLMKESEVLLKNRRFSNRLVRGD 393
           FYLS+KNKTCTA+L+E Y DK+S+E HP+L +R+KYI LMK SE++LK+RR S       
Sbjct: 319 FYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNSFGFRDEG 378

Query: 394 NLALDLDLD 399
            +  DLDLD
Sbjct: 379 VVDKDLDLD 384

[Close]

BLAST of Sed0016810 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 216.1 bits (549), Expect = 5.3e-56
Identity = 129/365 (35.34%), Postives = 209/365 (57.26%), Query Frame = 0


Query: 31  YSYTQKSSYVDVYMKWKKDPYYDSIEHILKSTELQSIISLKNCIAQNPDGSIPISAVSKR 90
           + Y Q+   V+V +KW KD   D++  +++   L+++ +L + I+ +PD  +PI  +   
Sbjct: 24  FFYQQRCGLVNVKLKWVKDRELDAV--VVREKHLRAVCNLVSVISASPDLRLPIFKLLPH 83

Query: 91  GLQMGL--SMKVARFLRQYPSIFEE---FTGPEYNHPWFKLTQKAAEIDAEEKRVYQNCR 150
             Q+GL   +K++ F+R+YP+IF E   +     + P F LT++  ++  EE  V +   
Sbjct: 84  RGQLGLPQELKLSAFIRRYPNIFVEHCYWDSAGTSVPCFGLTRETIDLYYEEVDVSRVNE 143

Query: 151 EDLICRLKKFILMSKNRALPLKIIQGMQWYLGIPDDFLHNPDVNLDGSFRLVKMEDGLEG 210
            D++ RL K ++++  R L L  I  ++W LG+P D+  +        F LVK+   L+G
Sbjct: 144 RDVLVRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPDLFSLVKLSSDLDG 203

Query: 211 L-AVECDENFMSVVQKNGVKRGVYSGGTMEPLEFPLFPSKGLRLRKKIEDWLLEFQKLPY 270
           L  +  DE+    V +  ++  V   G  E + FP+  ++G  L++K  +WL E+Q+LPY
Sbjct: 204 LKLIHWDEHL--AVSQMQLREDV---GNDERMAFPVKFTRGFGLKRKSIEWLQEWQRLPY 263

Query: 271 VSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEHSAERKKLLCLKKYMGLPQKVHKAFE 330
            SPY D  HLDP +D++EKR VG  HELL L +    ERK +  L+K   LPQK  K FE
Sbjct: 264 TSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRKPFALPQKFTKVFE 323

Query: 331 RHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPILRIRRKYINLMKESEVLLKNRRFSNR 390
           RHP +FY+S+K  T T +L+EAY  +  IE+HP++ +R K+ N+M E   L ++R    +
Sbjct: 324 RHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNEG-FLDRSRGLYQK 380

[Close]

BLAST of Sed0016810 vs. TAIR 10
Match: AT3G58520.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-52
Identity = 127/397 (31.99%), Postives = 215/397 (54.16%), Query Frame = 0


Query: 22  LFHYFQNPPYSYTQKSSYVDVYMKWKKDPYYDSIEHILKS-TELQSIISLKNCIAQNPDG 81
           LFH  Q     +    +   V +KW K+    +++H++ + T+L++   LK+ I ++P G
Sbjct: 15  LFHQHQ----QWRGMGAMTKVRLKWVKN---KNLDHVIDTETDLKAACILKDAIKRSPTG 74

Query: 82  SIPISAVSKRGLQMGLSMKVARFLRQYPSIFEEFTGPEY-NHPWFKLTQKAAEIDAEEKR 141
            +   +V+     +GL++ V RFLR+YP++F EF    Y + P FKLT  A  +D++E+ 
Sbjct: 75  FLTAKSVADWQKLLGLTVPVLRFLRRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEI 134

Query: 142 VYQNCREDLICRLKKFILMSKNRALPLKIIQGMQWYLGIPDDFLHNPDVNLDGSFRLVKM 201
           ++Q+   D + RL + ++M +++ + L+ +  +++ LG+PD++     +     F  VK 
Sbjct: 135 IHQSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKA 194

Query: 202 EDGLEGLAVE--CDENFMSVVQKNGVKRGVYSGGT--------MEPLEFPLFPSKGLRLR 261
            +G   L +    DE   S +QK      V    +           L FP+   +G   +
Sbjct: 195 SNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQ 254

Query: 262 KKIEDWLLEFQKLPYVSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEHSAERKKLLCL 321
           KK++ W+ EFQKLPY+SPY D  ++DP SD+ EKR V  LHELL L +    +R  L  +
Sbjct: 255 KKVKAWMDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSM 314

Query: 322 KKYMGLPQKVHKAFERHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPILRIRRKYINLM 381
           +  + +P K  + F R+P +FYLSLK KT T +LKE Y     ++ HP+ R+R K+ ++M
Sbjct: 315 RAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVM 374

Query: 382 KESEVLLKNRRFSNRLVRGDNLALDLDLDAADEDGKE 407
           + +  L + R     +V  + L LD   D  +E+G E
Sbjct: 375 R-TGFLYRARGLG--MVSKEELLLDRPEDDLEEEGSE 401

[Close]

BLAST of Sed0016810 vs. TAIR 10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 188.3 bits (477), Expect = 1.2e-47
Identity = 117/355 (32.96%), Postives = 194/355 (54.65%), Query Frame = 0


Query: 35  QKSSYVDVYMKWKKDPYYDSIEHILKSTELQSIISLKNCIAQNPDGSIPISAVSKRGLQM 94
           Q+ ++V+  +KW  D Y D  E + +   L+ +ISLK+ I  +P  S+P+S++S     +
Sbjct: 14  QRRTFVNARVKWVSDHYLD--EAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLKPLV 73

Query: 95  GLSMKVARFLRQYPSIFEEFTGPEYNHP-WFKLTQKAAEIDAEEKRVYQN--CREDLICR 154
            L +  A F ++YPS+F  F  P  +HP   +LT +A  +  EE+ ++ +   R   + R
Sbjct: 74  NLHITAAAFFQKYPSVFTTFQ-PSPSHPLHVRLTPQALTLHKEEETIHLSPPQRNVTVQR 133

Query: 155 LKKFILMSKNRALPLKIIQGMQWYLGIPDDFLHNPDVNLDGSFRLVKMEDGLEG------ 214
           L KF++++   +LPL ++   ++ LG+P D++ +   +    F + +++D L G      
Sbjct: 134 LTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTLAL 193

Query: 215 --------LAVECDENFMSVVQKNGVKRGVYSGGTMEPLEFPLFPSKGLRLRKKIEDWLL 274
                   L V   E   + +  + VK+G+    +M       FP KG  L K++++W+ 
Sbjct: 194 TISSRRNNLPVSEMERREATIDGSRVKKGLRIRYSMN------FP-KGYELHKRVKNWVE 253

Query: 275 EFQKLPYVSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEHSAERKKLLCLKKYMGLPQ 334
           ++Q LPY+SPY +  HL   SD AEK  V  LHELL L V    E   ++CL +Y+G   
Sbjct: 254 QWQNLPYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGM 313

Query: 335 KVHKAFERHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPILRIRRKYINLMKES 373
           +  KA   HP +FY+S K +T T VL+EAY     +E+HP++ IR +YI LM +S
Sbjct: 314 RFKKALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKS 358

[Close]

BLAST of Sed0016810 vs. TAIR 10
Match: AT3G58520.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 179.1 bits (453), Expect = 7.2e-45
Identity = 121/397 (30.48%), Postives = 205/397 (51.64%), Query Frame = 0


Query: 22  LFHYFQNPPYSYTQKSSYVDVYMKWKKDPYYDSIEHILKS-TELQSIISLKNCIAQNPDG 81
           LFH  Q     +    +   V +KW K+    +++H++ + T+L++   LK+ I ++P G
Sbjct: 15  LFHQHQ----QWRGMGAMTKVRLKWVKN---KNLDHVIDTETDLKAACILKDAIKRSPTG 74

Query: 82  SIPISAVSKRGLQMGLSMKVARFLRQYPSIFEEFTGPEY-NHPWFKLTQKAAEIDAEEKR 141
            I I                  + ++YP++F EF    Y + P FKLT  A  +D++E+ 
Sbjct: 75  -ITIRENFN-----------CYWNKRYPTLFHEFPHARYASLPCFKLTDTALMLDSQEEI 134

Query: 142 VYQNCREDLICRLKKFILMSKNRALPLKIIQGMQWYLGIPDDFLHNPDVNLDGSFRLVKM 201
           ++Q+   D + RL + ++M +++ + L+ +  +++ LG+PD++     +     F  VK 
Sbjct: 135 IHQSHEADTVERLCRVLMMMRSKTVSLRSLHSLKFDLGLPDNYEKTLVMKYPDHFCFVKA 194

Query: 202 EDGLEGLAVE--CDENFMSVVQKNGVKRGVYSGGT--------MEPLEFPLFPSKGLRLR 261
            +G   L +    DE   S +QK      V    +           L FP+   +G   +
Sbjct: 195 SNGNPCLKLVKWRDEFAFSALQKRNEDNDVSGEESRYREFKRGQSTLTFPMSFPRGYGAQ 254

Query: 262 KKIEDWLLEFQKLPYVSPYSDFCHLDPNSDIAEKRLVGFLHELLCLFVEHSAERKKLLCL 321
           KK++ W+ EFQKLPY+SPY D  ++DP SD+ EKR V  LHELL L +    +R  L  +
Sbjct: 255 KKVKAWMDEFQKLPYISPYDDPSNIDPESDLMEKRAVAVLHELLSLTIHKKTKRNYLRSM 314

Query: 322 KKYMGLPQKVHKAFERHPHMFYLSLKNKTCTAVLKEAYCDKSSIERHPILRIRRKYINLM 381
           +  + +P K  + F R+P +FYLSLK KT T +LKE Y     ++ HP+ R+R K+ ++M
Sbjct: 315 RAELNIPHKFTRLFTRYPGIFYLSLKCKTTTVILKEGYRRGKLVDPHPLTRLRDKFYHVM 374

Query: 382 KESEVLLKNRRFSNRLVRGDNLALDLDLDAADEDGKE 407
           + +  L + R     +V  + L LD   D  +E+G E
Sbjct: 375 R-TGFLYRARGLG--MVSKEELLLDRPEDDLEEEGSE 389

The following BLAST results are available for this feature:

BLAST of Sed0016810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891886.1	6.3e-200	83.90	protein WHAT'S THIS FACTOR 9, mitochondrial [Benincasa hispida] >XP_038891887.1 ...	[more]
XP_023541928.1	6.7e-194	81.40	protein WHAT'S THIS FACTOR 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022945306.1	4.3e-193	81.75	protein WHAT'S THIS FACTOR 1 [Cucurbita moschata]	[more]
KAG7012909.1	4.8e-192	81.46	Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_004142494.1	5.3e-191	80.49	protein WHAT'S THIS FACTOR 9, mitochondrial [Cucumis sativus] >XP_031741340.1 pr...	[more]

BLAST of Sed0016810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUZ6	2.6e-140	65.85	Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W...	[more]
B6TTV8	3.9e-27	25.45	Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=...	[more]
A0MFS5	4.3e-26	25.40	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q65XL5	1.6e-25	25.68	Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon...	[more]
Q689D6	7.6e-23	26.84	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1...	[more]

BLAST of Sed0016810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G0H3	2.1e-193	81.75	protein WHAT'S THIS FACTOR 1 OS=Cucurbita moschata OX=3662 GN=LOC111449585 PE=4 ...	[more]
A0A0A0KTJ8	2.6e-191	80.49	PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G622690 PE=4 S...	[more]
A0A6J1HPK9	3.4e-191	80.78	protein WHAT'S THIS FACTOR 1 OS=Cucurbita maxima OX=3661 GN=LOC111466548 PE=4 SV...	[more]
A0A1S4DW88	1.4e-189	80.98	protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103489450 PE=4...	[more]
A0A5D3CD59	1.4e-189	80.98	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of Sed0016810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39120.1	1.8e-141	65.85	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT5G48040.1	5.3e-56	35.34	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.1	1.2e-52	31.99	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G24320.1	1.2e-47	32.96	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G58520.2	7.2e-45	30.48	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 47..373 e-value: 8.8E-107 score: 356.8
IPR045040	PORR family	PANTHER	PTHR31476	PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC	coord: 24..403
None	No IPR available	PANTHER	PTHR31476:SF13	PROTEIN WHAT'S THIS FACTOR 9, MITOCHONDRIAL	coord: 24..403

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016810.1	Sed0016810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding