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Sed0016717 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCGACCACCGCCACCACCGCTTCTCCGTTGCGAATCCCTCTCTCTCTCTCTCTGCCACTTCGATCGTATTTACCCAATTTTTCAGTGAGTTTCTGTTTTTCAAATCTTCTCTGCTTAATTTCATTTGGAATCTCTGTTTCTCAATTCGGCTGTGTATTTCTCTTTTCGTTGGAATTTTTCTTTTTGGATTTCATTTTGGGGTCTTTTTCTCTGATGGGTTGTGGGATTTGGGAATTGGGAGTGAGTTTGTTGGTGGGTAATCGTGAAACTTGATATTCTTTGTGGGTTTTCTTTGTTTGAGAGATTGGGACAGATTTGGGGATGTTGCTTGAATGGAAGGAATTTCTGTGTCTTTGGTTTGTTGTTCTATGGAATTGATGATTGTTCCTGTTCTGAAATGCTTTGATGAGAATTGAATTAGATGAACGTGTGTTTGATGAATTTCTGAGTGTTTTAATTATCTTAATCGCTTTTGGTTTTGGCGAATTGGGTTGTTTTTCTTTCCCTTTTTGCAGTTGCTTTTGTGTGTGGATTTGTAGTGCCGTTTGTAGGCGGGTTTTTTTTTTTATAGGAAACAAAAACAACTTCAATGATAAAAGGAAAGCGTTATGGAGTAGAGGGTTAGGTTCTTACTCTTTTTTACAATGAGATAATACGAAAAATGATACTAGTAGCTCTCAAGAAGTTGAACGTACTAAGAGGGTTGAGCTTGCACATTCGAGAGATTATGTAATGAATTAACCACATATCCAGAAGGTATTAGGGGAATCTCTATCGGATCTGGCCAGGGAGAAAGGAGGAGATAAAGCCTATTTCCATGTCAGTGCTAGAGGGTGAAGGCGAAAAGTTGAGCTTGCTCATTAGAGATCGAACACTCGAGGAATGTTGTCGATTTGCCAACGAGTGTTGTTTGTAGGCATTTTTTGAAGTGATAGATGCATCAATCAATAAAGTTGAGATGTTTTCTAAGTTTAACCATTTACATATGGCACTCACTAACTCAGTTACTACCGTATTAACTTTTTGTGTCTTGTCTGGCTTCCCATCCTTGATATGTTTGCATACATGTTTTTTCGGTAGTTTTTTTCCTGCAAGAATAGTATTCTCTTGTTCTTTTGTTTTGAAATTGGTTATGGTATTTTCTGAAAGGGTTTGATTGTCGATTGCAGTGGAGTTTGAGGTTGATGGTAATAGTGAGGTGGTGGGAAATTCGACTGTGGTGGAACTGGAGGATAGTAAACCTTTTGATGAGAATGAAACAGGTGTAAGCTCAATTGAAAGGATTTTTGATCAAGATCGAGATGAGAAAATTATTCTAGATTCATCTGGAAGGAATGCAATTCTGGATTCTGTTCCTGGATTGCCAGTAGTTCAAGCAGATGAGCCCTATGTTGGACAAGAATTTGAAAACGAGGCAGCAGCTCATGCGTTTTATAATTCTTATGCTATGCGTGTTGGCTTTGTAATTCGTGTTAGCAAGCTCTCGCGATCAAGACGGGATGGGACGGCTATTGGCCGTGCACTAGTTTGTAACAAAGAGGGTTACAGAATGCCGGACAGGCGGGAAAAAATTGTGAGGCAAAGGGCAGAGACGAGGGTAGGCTGCAGAGCAATGATTTTGGTGAGAAAAGTAACTTCTGGGAAATGGGTTATCACTAAATTTGTGAAAGAGCATACTCATCCTTTATCTCCTGGGAAAGGTCGAAGAGATTGCATTTACGATCAATATCCGGTAAGTTCTTGTTCCACATACACATGTTGCTCTGATTGTAGTTTCACGTGAATTAGTTAGAAAATAAATTATTTTGGAATGAATCATCTAGCCTTTTCCGAATAAGATTTTTTCAGCTAACTTTTTAGTTGACGAAGTAAAATAGATCGGAGACAAGCAGAATGAGAATGATTAAGGGAGGAATGGGAATGCAAGGAAGAATGATTAACTGGGAGTATGCATGATTATCTGTGTTTGGGTGATGGAAATGATTATGGGGAACCGTTACCTATGTTTGAGGTGCAGATAATGGTTATGGGAGGAAGCATTACATCGGTTTGGGGTACATAGAATGATAATGAGTGAATAAAATAGTCAATATGAGATTATGAAAAGTATTATGGAGAAATGAATGGTGATTAGGGGCGAATAATATTGATTACGAGGAAATGATTGTCGGTGATGGATTTATTCTCTCCATAATCATTCCAATTCTCCTTGTCCGTATACAGCTATTTGAAACTAGTGTTTTATTCATCTTTGTTGCTTTATTGAGTCCATCTACACTTTACTAGACATCCTGCATCCTTCATCATAATCATACATCCTCCTTAAAGCACACACACAAAAACACAAAATTGTTGTATTTTATAAGATCTTGAAATATTATACCAAATATGTTCTCGAGATGTAGGTTTCTTAGTTTCAGAAATTAGTCTACCTTAAAGAAGAAAAATCACCAGGGTATTTAAGGAGGTTCTGTAGAGCTCCTATTATGTCGATTCGATGGCTGTCAAACTAACTCTAACTAAAATTTTGCATATAAAGTGATATATCAATTTTGCTGGTCGATAGAAGATTATTTAGTGAAGCTAGTGCCTGAGATGCCTGGAATCTCATTTATTTAGTTTGATCTTTGCCTTTTTGTTGGAAATGCTTTTGATGGTTTTGGTGGGGATGGGATACAGGTGAGGTTCTGCATCATGTGTATTTAGTAGTCGTCTTGGTTTTCAATTCTAAGAAGAAAAGAAAAAAGAGGTTCATTGGCATTTAGGTTGAAGTTGACTTCTCAGATGCTTGAGTTGAAAAATGTAAAAGCTAATTTGTATATGCTTTTCTTTGTTACGATGTTTCCACTGATGATAGCCATTAGGGGGTGTTTGGGGCAAGTGGATCATTACACACGTTTGGGCCACTAATAATCATTCATTGTGCCTGTAACTACTTTTTATTTCCATAATCACTCTTCATTCCCCCGTATTCCCCCATTAATCATTCCTATTCCGTTAATCATTTCCTTTCCTTCGCTCCAAACACAATACATCTAAGTAGCTCAGTAGTTTATTTGGTATGCCGCGTATTTGGTCTTGGTGCGTTTAACATAGCATAGAAATTGATCACTTCTCTTGGGTGGGAAGTGACTCAAGGGTAGGGTAGTTTCTTGTTTATGTAGCCAACTTCCTTGTTCCGAGTCCGCGTCCTGTTTGATTGTTGATCCTGTTTGATTGTTGACGTCGGTTTCTAGCTTTAGCTTTTGACTCTGCTTGAAAGCCGTTTGTTAATACAGATTAGTTATCACAGCGCACATTGAGGATTTTAATAGATTTCTCAATAAAACAACCTATGTGCATATTTTTAGAATCGATCAAATCATGGACACACATTTATGTCTATTGCTTTTGTTGACTTAGTCTTATTATAATTACAAATGTATTCTTGACCGTGCTTACACCTGTATTATTACTCTTTAACTCAACTTTTGCCGTTGCATTTCAGAACGAACACGATAAGATACGTGAACTATCTCAACAGCTCGCAGTTGAGAAAAAGCGATCTGCAACATATAAAAGGCATCTAGAAGTGATATTCGAATACATCGAGGAACATAACAATAGCTTGTCGAAAAAGATCCAACATATAGTAGACAATGTGAAGGAGATGGAAAGCATAGAACAGCAGAATCATAGATAGTATTTGGCTATACTCTTATACTTGCAGTTTGGGATTCCAAAATGGGTTGCTGAAGAAATTGTTAGTTCAGTATTATTCATTGTGATATGTTCCAGCATTTAGATGTCAATTCAGTTTCTCAAAAAAATGGAGTATATTGCTCATGGTATTCATTGCTTGTAAACCGAATGTATGCCATGTTTTGTACAGCATTCAAACGATTTGTATCTTACTTTCATTAGTCTCAGTTTTTTTTTT CCGACCACCGCCACCACCGCTTCTCCGTTGCGAATCCCTCTCTCTCTCTCTCTGCCACTTCGATCGTATTTACCCAATTTTTCATGGAGTTTGAGGTTGATGGTAATAGTGAGGTGGTGGGAAATTCGACTGTGGTGGAACTGGAGGATAGTAAACCTTTTGATGAGAATGAAACAGGTGTAAGCTCAATTGAAAGGATTTTTGATCAAGATCGAGATGAGAAAATTATTCTAGATTCATCTGGAAGGAATGCAATTCTGGATTCTGTTCCTGGATTGCCAGTAGTTCAAGCAGATGAGCCCTATGTTGGACAAGAATTTGAAAACGAGGCAGCAGCTCATGCGTTTTATAATTCTTATGCTATGCGTGTTGGCTTTGTAATTCGTGTTAGCAAGCTCTCGCGATCAAGACGGGATGGGACGGCTATTGGCCGTGCACTAGTTTGTAACAAAGAGGGTTACAGAATGCCGGACAGGCGGGAAAAAATTGTGAGGCAAAGGGCAGAGACGAGGGTAGGCTGCAGAGCAATGATTTTGGTGAGAAAAGTAACTTCTGGGAAATGGGTTATCACTAAATTTGTGAAAGAGCATACTCATCCTTTATCTCCTGGGAAAGGTCGAAGAGATTGCATTTACGATCAATATCCGAACGAACACGATAAGATACGTGAACTATCTCAACAGCTCGCAGTTGAGAAAAAGCGATCTGCAACATATAAAAGGCATCTAGAAGTGATATTCGAATACATCGAGGAACATAACAATAGCTTGTCGAAAAAGATCCAACATATAGTAGACAATGTGAAGGAGATGGAAAGCATAGAACAGCAGAATCATAGATAGTATTTGGCTATACTCTTATACTTGCAGTTTGGGATTCCAAAATGGGTTGCTGAAGAAATTGTTAGTTCAGTATTATTCATTGTGATATGTTCCAGCATTTAGATGTCAATTCAGTTTCTCAAAAAAATGGAGTATATTGCTCATGGTATTCATTGCTTGTAAACCGAATGTATGCCATGTTTTGTACAGCATTCAAACGATTTGTATCTTACTTTCATTAGTCTCAGTTTTTTTTTT ATGGAGTTTGAGGTTGATGGTAATAGTGAGGTGGTGGGAAATTCGACTGTGGTGGAACTGGAGGATAGTAAACCTTTTGATGAGAATGAAACAGGTGTAAGCTCAATTGAAAGGATTTTTGATCAAGATCGAGATGAGAAAATTATTCTAGATTCATCTGGAAGGAATGCAATTCTGGATTCTGTTCCTGGATTGCCAGTAGTTCAAGCAGATGAGCCCTATGTTGGACAAGAATTTGAAAACGAGGCAGCAGCTCATGCGTTTTATAATTCTTATGCTATGCGTGTTGGCTTTGTAATTCGTGTTAGCAAGCTCTCGCGATCAAGACGGGATGGGACGGCTATTGGCCGTGCACTAGTTTGTAACAAAGAGGGTTACAGAATGCCGGACAGGCGGGAAAAAATTGTGAGGCAAAGGGCAGAGACGAGGGTAGGCTGCAGAGCAATGATTTTGGTGAGAAAAGTAACTTCTGGGAAATGGGTTATCACTAAATTTGTGAAAGAGCATACTCATCCTTTATCTCCTGGGAAAGGTCGAAGAGATTGCATTTACGATCAATATCCGAACGAACACGATAAGATACGTGAACTATCTCAACAGCTCGCAGTTGAGAAAAAGCGATCTGCAACATATAAAAGGCATCTAGAAGTGATATTCGAATACATCGAGGAACATAACAATAGCTTGTCGAAAAAGATCCAACATATAGTAGACAATGTGAAGGAGATGGAAAGCATAGAACAGCAGAATCATAGATAG MEFEVDGNSEVVGNSTVVELEDSKPFDENETGVSSIERIFDQDRDEKIILDSSGRNAILDSVPGLPVVQADEPYVGQEFENEAAAHAFYNSYAMRVGFVIRVSKLSRSRRDGTAIGRALVCNKEGYRMPDRREKIVRQRAETRVGCRAMILVRKVTSGKWVITKFVKEHTHPLSPGKGRRDCIYDQYPNEHDKIRELSQQLAVEKKRSATYKRHLEVIFEYIEEHNNSLSKKIQHIVDNVKEMESIEQQNHR Homology
BLAST of Sed0016717 vs. NCBI nr
Match: XP_022138245.1 (protein FAR1-RELATED SEQUENCE 6 [Momordica charantia]) HSP 1 Score: 461.5 bits (1186), Expect = 4.8e-126 Identity = 236/252 (93.65%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of Sed0016717 vs. NCBI nr
Match: XP_038876355.1 (protein FAR1-RELATED SEQUENCE 6-like [Benincasa hispida]) HSP 1 Score: 459.9 bits (1182), Expect = 1.4e-125 Identity = 234/252 (92.86%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of Sed0016717 vs. NCBI nr
Match: XP_008453933.1 (PREDICTED: protein FAR1-RELATED SEQUENCE 6 [Cucumis melo]) HSP 1 Score: 459.5 bits (1181), Expect = 1.8e-125 Identity = 233/252 (92.46%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of Sed0016717 vs. NCBI nr
Match: XP_004152087.1 (protein FAR1-RELATED SEQUENCE 6 [Cucumis sativus] >KAE8649125.1 hypothetical protein Csa_015283 [Cucumis sativus]) HSP 1 Score: 459.1 bits (1180), Expect = 2.4e-125 Identity = 232/252 (92.06%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of Sed0016717 vs. NCBI nr
Match: KAG7029074.1 (Protein FAR1-RELATED SEQUENCE 5, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 458.8 bits (1179), Expect = 3.1e-125 Identity = 232/252 (92.06%), Postives = 243/252 (96.43%), Query Frame = 0
BLAST of Sed0016717 vs. ExPASy Swiss-Prot
Match: Q9SZL8 (Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 1.9e-24 Identity = 61/108 (56.48%), Postives = 73/108 (67.59%), Query Frame = 0
BLAST of Sed0016717 vs. ExPASy Swiss-Prot
Match: Q9M8J3 (Protein FAR1-RELATED SEQUENCE 7 OS=Arabidopsis thaliana OX=3702 GN=FRS7 PE=2 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.2e-16 Identity = 42/109 (38.53%), Postives = 63/109 (57.80%), Query Frame = 0
BLAST of Sed0016717 vs. ExPASy Swiss-Prot
Match: Q3E7I5 (Protein FAR1-RELATED SEQUENCE 12 OS=Arabidopsis thaliana OX=3702 GN=FRS12 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.1e-15 Identity = 41/110 (37.27%), Postives = 62/110 (56.36%), Query Frame = 0
BLAST of Sed0016717 vs. ExPASy Swiss-Prot
Match: Q9SSQ4 (Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=FRS6 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.7e-13 Identity = 44/118 (37.29%), Postives = 61/118 (51.69%), Query Frame = 0
BLAST of Sed0016717 vs. ExPASy Swiss-Prot
Match: Q9S793 (Protein FAR1-RELATED SEQUENCE 8 OS=Arabidopsis thaliana OX=3702 GN=FRS8 PE=2 SV=2) HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11 Identity = 38/108 (35.19%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of Sed0016717 vs. ExPASy TrEMBL
Match: A0A6J1C8X6 (protein FAR1-RELATED SEQUENCE 6 OS=Momordica charantia OX=3673 GN=LOC111009466 PE=4 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 2.3e-126 Identity = 236/252 (93.65%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of Sed0016717 vs. ExPASy TrEMBL
Match: A0A1S3BY81 (protein FAR1-RELATED SEQUENCE 6 OS=Cucumis melo OX=3656 GN=LOC103494508 PE=4 SV=1) HSP 1 Score: 459.5 bits (1181), Expect = 8.8e-126 Identity = 233/252 (92.46%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of Sed0016717 vs. ExPASy TrEMBL
Match: A0A0A0KZ37 (FAR1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G017090 PE=4 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 2.6e-125 Identity = 231/252 (91.67%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of Sed0016717 vs. ExPASy TrEMBL
Match: A0A6J1GW29 (protein FAR1-RELATED SEQUENCE 6-like OS=Cucurbita moschata OX=3662 GN=LOC111457418 PE=4 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 2.6e-125 Identity = 232/252 (92.06%), Postives = 244/252 (96.83%), Query Frame = 0
BLAST of Sed0016717 vs. ExPASy TrEMBL
Match: A0A6J1EXF3 (protein FAR1-RELATED SEQUENCE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111439106 PE=4 SV=1) HSP 1 Score: 457.6 bits (1176), Expect = 3.4e-125 Identity = 232/252 (92.06%), Postives = 242/252 (96.03%), Query Frame = 0
BLAST of Sed0016717 vs. TAIR 10
Match: AT3G59470.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 303.1 bits (775), Expect = 2.0e-82 Identity = 160/244 (65.57%), Postives = 191/244 (78.28%), Query Frame = 0
BLAST of Sed0016717 vs. TAIR 10
Match: AT3G59470.2 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 303.1 bits (775), Expect = 2.0e-82 Identity = 160/244 (65.57%), Postives = 191/244 (78.28%), Query Frame = 0
BLAST of Sed0016717 vs. TAIR 10
Match: AT3G07500.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 154.5 bits (389), Expect = 1.2e-37 Identity = 82/178 (46.07%), Postives = 122/178 (68.54%), Query Frame = 0
BLAST of Sed0016717 vs. TAIR 10
Match: AT2G43280.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32 Identity = 81/183 (44.26%), Postives = 115/183 (62.84%), Query Frame = 0
BLAST of Sed0016717 vs. TAIR 10
Match: AT4G12850.1 (Far-red impaired responsive (FAR1) family protein ) HSP 1 Score: 124.0 bits (310), Expect = 1.7e-28 Identity = 66/177 (37.29%), Postives = 107/177 (60.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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