Sed0016679 (gene) Chayote v1

Overview


Name	Sed0016679
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Auxin-responsive protein
Location	LG14: 3123204 .. 3124404 (-)
RNA-Seq Expression	Sed0016679
Synteny	Sed0016679

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCGCCTCCATTCTTGTATAAAACCCATTTTCCATATCCATGGATTCCAAGCTCCATCTTCACAAACCCTAGCCACTGCTCTGCAACCTCTTCCTTCAAAAATGCTAGGCAAGAAAATGGTGTCCTTCAAGAAACTCGCCAACAAGGTGAAGGTCCGGGCCGGAGCCGACGAGAAACCGCACAACGAGAGTTTGCTGCTGGAATCGTCGGAGAATCACGATTCGCAGTCGCCGTCGTCTACTCCGACCGGATCCTTCGCGGTTTACGTCGGCGACGAGCGGCAGCGGTTCGTCGTTCCGACGAGCTTCCTGTCGCATCCGCTCTTCAAGATGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAACGCGCTTGTCGTTCCTTGCAGCGTCTCGGCTTTTCAAGGAATTGTTAGCGCGGTTGAGTGCTGTAATGGTAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTTTAGAACAGATTGATTGTACAGGAATCGTTCGATCTTTTCGGTGAGGATTTTCGTCTTCGATTTCTGTTTGAACCGAAGAGGATTTGATCTGATTCGCGATTCTATTCGATTTCGGCGAGATTGTTGTGGAATTTCTTTAGAACAGATCAAATGCAGAGGAATTTCAAATCGCTAGGGCTCGAATCGTCTGATCCTTTCGGTAAAGAAATTCGTCTTCGATTTCTGTTTAAACTGAAGAGGATTTGATTTGATCCGATTCGATTCGATTTTGTTCGATTGAATTCGACCGATTTTACTGTTCGATTGGCTGAGAATATGAATCTCAATTCGATTTCGGCGAAATTGTCGAGGATTTTCTGTAGAACAGATCAAATGCAGAGGAATATCAAATCGTTTGATCTTTTCGGTAAGGAATTTCATCTTCGATTTCTGTTTAAACTGAAGAGGATTTTGATTTTGATTCGATTCTGTTGGAATGAATTTGGCGGATTTTACTGTTCGATTGGATGTGAATGTGAATCTTTTCAATTCAGATCCAATTGGATTTGTTGATTCATTTTTCTTCGGAATTGTAAAATGAGAGCTGTAATTCTTGGATGAAATTGAATTTGTCATTTGTAATTTGTAGTTTGTCATTACTATGTATGAACATAAATTTTTATTTAGGTAATTTGTCAACTTTCTTGACAGTTTTTTTTTCTTGGTAGCTGGCATTGCCG

mRNA sequence

CCCGCCTCCATTCTTGTATAAAACCCATTTTCCATATCCATGGATTCCAAGCTCCATCTTCACAAACCCTAGCCACTGCTCTGCAACCTCTTCCTTCAAAAATGCTAGGCAAGAAAATGGTGTCCTTCAAGAAACTCGCCAACAAGGTGAAGGTCCGGGCCGGAGCCGACGAGAAACCGCACAACGAGAGTTTGCTGCTGGAATCGTCGGAGAATCACGATTCGCAGTCGCCGTCGTCTACTCCGACCGGATCCTTCGCGGTTTACGTCGGCGACGAGCGGCAGCGGTTCGTCGTTCCGACGAGCTTCCTGTCGCATCCGCTCTTCAAGATGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAACGCGCTTGTCGTTCCTTGCAGCGTCTCGGCTTTTCAAGGAATTGTTAGCGCGGTTGAGTGCTGTAATGGTAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTTTAGAACAGATTGATTGTACAGGAATCGTTCGATCTTTTCGGTGAGGATTTTCGTCTTCGATTTCTGTTTGAACCGAAGAGGATTTGATCTGATTCGCGATTCTATTCGATTTCGGCGAGATTGTTGTGGAATTTCTTTAGAACAGATCAAATGCAGAGGAATTTCAAATCGCTAGGGCTCGAATCGTCTGATCCTTTCGGTAAAGAAATTCGTCTTCGATTTCTGTTTAAACTGAAGAGGATTTGATTTGATCCGATTCGATTCGATTTTGTTCGATTGAATTCGACCGATTTTACTGTTCGATTGGCTGAGAATATGAATCTCAATTCGATTTCGGCGAAATTGTCGAGGATTTTCTGTAGAACAGATCAAATGCAGAGGAATATCAAATCGTTTGATCTTTTCGGTAAGGAATTTCATCTTCGATTTCTGTTTAAACTGAAGAGGATTTTGATTTTGATTCGATTCTGTTGGAATGAATTTGGCGGATTTTACTGTTCGATTGGATGTGAATGTGAATCTTTTCAATTCAGATCCAATTGGATTTGTTGATTCATTTTTCTTCGGAATTGTAAAATGAGAGCTGTAATTCTTGGATGAAATTGAATTTGTCATTTGTAATTTGTAGTTTGTCATTACTATGTATGAACATAAATTTTTATTTAGGTAATTTGTCAACTTTCTTGACAGTTTTTTTTTCTTGGTAGCTGGCATTGCCG

Coding sequence (CDS)

ATGCTAGGCAAGAAAATGGTGTCCTTCAAGAAACTCGCCAACAAGGTGAAGGTCCGGGCCGGAGCCGACGAGAAACCGCACAACGAGAGTTTGCTGCTGGAATCGTCGGAGAATCACGATTCGCAGTCGCCGTCGTCTACTCCGACCGGATCCTTCGCGGTTTACGTCGGCGACGAGCGGCAGCGGTTCGTCGTTCCGACGAGCTTCCTGTCGCATCCGCTCTTCAAGATGCTGCTCGATAAAGCGTACAGAGAGTTCGGATTCGAGCAGAGGAACGCGCTTGTCGTTCCTTGCAGCGTCTCGGCTTTTCAAGGAATTGTTAGCGCGGTTGAGTGCTGTAATGGTAGATTCGATTTCGGCGAGATTGTCGAGGAGTTTCTTTAG

Protein sequence

MLGKKMVSFKKLANKVKVRAGADEKPHNESLLLESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVECCNGRFDFGEIVEEFL

Homology

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BLAST of Sed0016679 vs. NCBI nr
Match: XP_022925979.1 (auxin-induced protein 15A [Cucurbita moschata] >XP_023544813.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo] >XP_023544814.1 auxin-induced protein 15A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 215.3 bits (547), Expect = 3.0e-52
Identity = 111/131 (84.73%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPSSTPTGSFAVYV 60
           MLGKKMVSFKKLA KVKVR G + E  +NE LL   LE  E+HDSQSPSSTPTGSFA+YV
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIYV 60

Query: 61  GDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVECCNGR 120
           GDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNAL+VPCSVSAFQ IVSAVECCNGR
Sbjct: 61  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR 120

Query: 121 FDFGEIVEEFL 128
           FDFGE+VEEFL
Sbjct: 121 FDFGELVEEFL 131

[Close]

BLAST of Sed0016679 vs. NCBI nr
Match: XP_022972619.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 215.3 bits (547), Expect = 3.0e-52
Identity = 115/133 (86.47%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 1   MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPS--STPTGSFAV 60
           MLGKKMVSFKKLA KVKVR G + E  HNE LL   LESS++HDS SPS  STPTGSFAV
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSHNEYLLRDRLESSKDHDSHSPSPTSTPTGSFAV 60

Query: 61  YVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVECCN 120
           YVGDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNALVVPCSVSAFQ IVSAVECCN
Sbjct: 61  YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECCN 120

Query: 121 GRFDFGEIVEEFL 128
           GRFDFGEIVEEFL
Sbjct: 121 GRFDFGEIVEEFL 133

[Close]

BLAST of Sed0016679 vs. NCBI nr
Match: KAG6604342.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034493.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 214.2 bits (544), Expect = 6.7e-52
Identity = 110/131 (83.97%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPSSTPTGSFAVYV 60
           MLGKKMVSFKKLA KVKVR G + E  +NE LL   LE  E+HDSQSP+STPTGSFA+YV
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPTSTPTGSFAIYV 60

Query: 61  GDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVECCNGR 120
           GDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNAL+VPCSVSAFQ IVSAVECCNGR
Sbjct: 61  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR 120

Query: 121 FDFGEIVEEFL 128
           FDFGE+VEEFL
Sbjct: 121 FDFGELVEEFL 131

[Close]

BLAST of Sed0016679 vs. NCBI nr
Match: XP_023517185.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 114/134 (85.07%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MLGKKMVSFKKLANKVKVRAG--ADEKPHNESLL---LESSENHDSQSPS--STPTGSFA 60
           MLGKKMVSFKKLA KVKVR G   +   HNE LL   LESS++HDS SPS  STPTGSFA
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLSDRLESSKDHDSHSPSPTSTPTGSFA 60

Query: 61  VYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVECC 120
           VYVGDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNALVVPCSVSAFQ IVSAVECC
Sbjct: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120

Query: 121 NGRFDFGEIVEEFL 128
           NGRFDFGEIVEEFL
Sbjct: 121 NGRFDFGEIVEEFL 134

[Close]

BLAST of Sed0016679 vs. NCBI nr
Match: KAG7027194.1 (Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51
Identity = 114/134 (85.07%), Postives = 118/134 (88.06%), Query Frame = 0


Query: 1   MLGKKMVSFKKLANKVKVRAG--ADEKPHNESLL---LESSENHDSQSPS--STPTGSFA 60
           MLGKKMVSFKKLA KVKVR G   +   HNE LL   LESS++HDS SPS  STPTGSFA
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPTSTPTGSFA 60

Query: 61  VYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVECC 120
           VYVGDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNALVVPCSVSAFQ IVSAVECC
Sbjct: 61  VYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECC 120

Query: 121 NGRFDFGEIVEEFL 128
           NGRFDFGEIVEEFL
Sbjct: 121 NGRFDFGEIVEEFL 134

[Close]

BLAST of Sed0016679 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.1e-12
Identity = 34/83 (40.96%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 28  NESLLLESSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFG 87
           +ES L  S      +  SS P G   VYVGDE +RFVV    L+HP+F  LL+++ +E+G
Sbjct: 31  SESFLRSSVTRRSKKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYG 90

Query: 88  FEQRNALVVPCSVSAFQGIVSAV 111
           +EQ+  L +PC V  F+ I+ ++
Sbjct: 91  YEQKGVLQIPCHVLVFERIMESL 113

[Close]

BLAST of Sed0016679 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.4e-12
Identity = 31/67 (46.27%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 44  PSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAF 103
           P   P G F VYVG+ R R++VP SFL+HP F+ LL +A  EFGF+    L +PC    F
Sbjct: 40  PLDVPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVF 99

Query: 104 QGIVSAV 111
           Q + S +
Sbjct: 100 QTLTSMI 106

[Close]

BLAST of Sed0016679 vs. ExPASy Swiss-Prot
Match: P0DKL1 (Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-10
Identity = 30/73 (41.10%), Postives = 41/73 (56.16%), Query Frame = 0


Query: 38  NHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVP 97
           N DS  P+  P G F VYVG+ R R++VP S L HP F+ LL ++  EFGF     +++P
Sbjct: 30  NDDSGLPNDVPKGHFVVYVGERRNRYIVPISCLDHPTFQDLLQRSEEEFGFNHDMGIIIP 89

Query: 98  CSVSAFQGIVSAV 111
           C    F    S +
Sbjct: 90  CQEVDFLSFFSMI 102

[Close]

BLAST of Sed0016679 vs. ExPASy Swiss-Prot
Match: P32295 (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.6e-10
Identity = 33/77 (42.86%), Postives = 44/77 (57.14%), Query Frame = 0


Query: 35  SSENHDSQSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQ-RNA 94
           S+ N  S      P G  AVYVG+  +RFV+P S L+ PLF+ LL +A  EFG++     
Sbjct: 13  SARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGG 72

Query: 95  LVVPCSVSAFQGIVSAV 111
           L +PCS   FQ I S +
Sbjct: 73  LTIPCSEDLFQHITSCL 89

[Close]

BLAST of Sed0016679 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.5e-09
Identity = 26/66 (39.39%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 45  SSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQ 104
           SS P+G   V VG++++RFVV    L+HP+F  LL+++ +E+G+ Q+  L +PC+V  F+
Sbjct: 46  SSVPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFE 105

Query: 105 GIVSAV 111
            +V ++
Sbjct: 106 QVVESL 111

[Close]

BLAST of Sed0016679 vs. ExPASy TrEMBL
Match: A0A6J1IC38 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111471159 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.5e-52
Identity = 115/133 (86.47%), Postives = 119/133 (89.47%), Query Frame = 0


Query: 1   MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPS--STPTGSFAV 60
           MLGKKMVSFKKLA KVKVR G + E  HNE LL   LESS++HDS SPS  STPTGSFAV
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSHNEYLLRDRLESSKDHDSHSPSPTSTPTGSFAV 60

Query: 61  YVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVECCN 120
           YVGDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNALVVPCSVSAFQ IVSAVECCN
Sbjct: 61  YVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVECCN 120

Query: 121 GRFDFGEIVEEFL 128
           GRFDFGEIVEEFL
Sbjct: 121 GRFDFGEIVEEFL 133

[Close]

BLAST of Sed0016679 vs. ExPASy TrEMBL
Match: A0A6J1EDQ2 (auxin-induced protein 15A OS=Cucurbita moschata OX=3662 GN=LOC111433233 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.5e-52
Identity = 111/131 (84.73%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPSSTPTGSFAVYV 60
           MLGKKMVSFKKLA KVKVR G + E  +NE LL   LE  E+HDSQSPSSTPTGSFA+YV
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSSTPTGSFAIYV 60

Query: 61  GDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVECCNGR 120
           GDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNAL+VPCSVSAFQ IVSAVECCNGR
Sbjct: 61  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECCNGR 120

Query: 121 FDFGEIVEEFL 128
           FDFGE+VEEFL
Sbjct: 121 FDFGELVEEFL 131

[Close]

BLAST of Sed0016679 vs. ExPASy TrEMBL
Match: A0A6J1BYB1 (auxin-responsive protein SAUR15 OS=Momordica charantia OX=3673 GN=LOC111005839 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 9.5e-52
Identity = 114/135 (84.44%), Postives = 120/135 (88.89%), Query Frame = 0


Query: 1   MLGKKMVSFKKLANKVKVRAGAD----EKPHNESLL---LESSENHDSQSP-SSTPTGSF 60
           MLGKKMVSFKKLA KVKVRAG D    E  H+ESLL   LE SE+ +SQSP SSTPTGSF
Sbjct: 1   MLGKKMVSFKKLAKKVKVRAGTDGGEAEASHHESLLRDRLELSEDQESQSPSSSTPTGSF 60

Query: 61  AVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVEC 120
           A+YVGDERQRFVVPTSFLSHPLF+M+LDKAYREFGFEQRNALVVPCSVSAFQ IVSAVEC
Sbjct: 61  AIYVGDERQRFVVPTSFLSHPLFRMVLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVEC 120

Query: 121 CNGRFDFGEIVEEFL 128
           CNGRFDFGEIVEEFL
Sbjct: 121 CNGRFDFGEIVEEFL 135

[Close]

BLAST of Sed0016679 vs. ExPASy TrEMBL
Match: A0A6J1HIA1 (auxin-induced protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111463231 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 9.5e-52
Identity = 114/136 (83.82%), Postives = 118/136 (86.76%), Query Frame = 0


Query: 1   MLGKKMVSFKKLANKVKVRAG--ADEKPHNESLL---LESSENHDSQSPS----STPTGS 60
           MLGKKMVSFKKLA KVKVR G   +   HNE LL   LESS++HDS SPS    STPTGS
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGESSSHNECLLRDRLESSKDHDSHSPSPSPTSTPTGS 60

Query: 61  FAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVE 120
           FAVYVGDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNALVVPCSVSAFQ IVSAVE
Sbjct: 61  FAVYVGDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALVVPCSVSAFQEIVSAVE 120

Query: 121 CCNGRFDFGEIVEEFL 128
           CCNGRFDFGEIVEEFL
Sbjct: 121 CCNGRFDFGEIVEEFL 136

[Close]

BLAST of Sed0016679 vs. ExPASy TrEMBL
Match: A0A6J1ILC7 (auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111478079 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.7e-51
Identity = 109/131 (83.21%), Postives = 117/131 (89.31%), Query Frame = 0


Query: 1   MLGKKMVSFKKLANKVKVRAGAD-EKPHNESLL---LESSENHDSQSPSSTPTGSFAVYV 60
           MLGKKMVSFKKLA KVKVR G + E  +NE LL   LE  E+HDSQSPS+TPTGSFA+YV
Sbjct: 1   MLGKKMVSFKKLAKKVKVRVGTEGEASYNECLLRDQLEPPEDHDSQSPSTTPTGSFAIYV 60

Query: 61  GDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQGIVSAVECCNGR 120
           GDERQRFVVPTSFLSHPLF+MLLDKAYREFGFEQRNAL+VPCSVSAFQ IVSAVEC NGR
Sbjct: 61  GDERQRFVVPTSFLSHPLFRMLLDKAYREFGFEQRNALMVPCSVSAFQEIVSAVECSNGR 120

Query: 121 FDFGEIVEEFL 128
           FDFGE+VEEFL
Sbjct: 121 FDFGELVEEFL 131

[Close]

BLAST of Sed0016679 vs. TAIR 10
Match: AT2G36210.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 142.5 bits (358), Expect = 2.3e-34
Identity = 78/136 (57.35%), Postives = 100/136 (73.53%), Query Frame = 0


Query: 1   MLGKKMVSFKKLANKVK-----VRAGAD---EKPHNESLLLESSENHDSQSPSSTPTGSF 60
           MLGK++ SFK LA K+K      R+G +   E  +NESLL+  ++   +   S TPTG+F
Sbjct: 1   MLGKRIASFKNLAKKMKSINTTTRSGGEGGSESTYNESLLMNEAD-EAAMMASKTPTGTF 60

Query: 61  AVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREF-GFEQRNALVVPCSVSAFQGIVSAVE 120
           AVYVG+ER + VVPTS+L+HPLF+MLLDK++ EF  FEQ+  LVVPCS+S FQ +V+AVE
Sbjct: 61  AVYVGEERVKRVVPTSYLNHPLFRMLLDKSHDEFLCFEQKVMLVVPCSLSVFQDVVNAVE 120

Query: 121 CCNGRFDFGEIVEEFL 128
            CNG FDFGE VEEFL
Sbjct: 121 SCNGNFDFGEFVEEFL 135

[Close]

BLAST of Sed0016679 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 84.7 bits (208), Expect = 5.7e-17
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 42  QSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVS 101
           + P   P G+ AVYVG E +RF++PTS+LSH LFK+LL+KA  EFGF+Q  AL +PC V 
Sbjct: 74  EPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVE 133

Query: 102 AFQGIVSAVE 112
            F+ ++  +E
Sbjct: 134 TFKYLLKCME 143

[Close]

BLAST of Sed0016679 vs. TAIR 10
Match: AT5G20810.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 84.7 bits (208), Expect = 5.7e-17
Identity = 36/70 (51.43%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 42  QSPSSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVS 101
           + P   P G+ AVYVG E +RF++PTS+LSH LFK+LL+KA  EFGF+Q  AL +PC V 
Sbjct: 74  EPPHDVPKGNLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAEEEFGFDQSGALTIPCEVE 133

Query: 102 AFQGIVSAVE 112
            F+ ++  +E
Sbjct: 134 TFKYLLKCME 143

[Close]

BLAST of Sed0016679 vs. TAIR 10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0


Query: 34  ESSENHDSQSPS---STPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQ 93
           +S E    QSP      P G  AVYVG E +RF++PT+FLSH LFK+LL+KA  E+GF+ 
Sbjct: 63  DSDEETTCQSPEPPPDVPKGYLAVYVGPELRRFIIPTNFLSHSLFKVLLEKAEEEYGFDH 122

Query: 94  RNALVVPCSVSAFQGIVSAVE 112
             AL +PC V  F+ ++  +E
Sbjct: 123 SGALTIPCEVETFKYLLKCIE 143

[Close]

BLAST of Sed0016679 vs. TAIR 10
Match: AT5G66260.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 74.7 bits (182), Expect = 5.9e-14
Identity = 31/66 (46.97%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 45  SSTPTGSFAVYVGDERQRFVVPTSFLSHPLFKMLLDKAYREFGFEQRNALVVPCSVSAFQ 104
           +  P G F VYVG  R R V+P SFL+HP+F+MLL ++  EFGF Q N L +PC    F+
Sbjct: 32  NGVPKGHFVVYVGHSRSRHVIPISFLTHPIFQMLLQQSEEEFGFFQDNGLTIPCDEHFFR 91

Query: 105 GIVSAV 111
            ++S++
Sbjct: 92  ALISSI 97

The following BLAST results are available for this feature:

BLAST of Sed0016679 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925979.1	3.0e-52	84.73	auxin-induced protein 15A [Cucurbita moschata] >XP_023544813.1 auxin-induced pro...	[more]
XP_022972619.1	3.0e-52	86.47	auxin-responsive protein SAUR50-like [Cucurbita maxima]	[more]
KAG6604342.1	6.7e-52	83.97	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_023517185.1	1.1e-51	85.07	auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]	[more]
KAG7027194.1	1.1e-51	85.07	Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]

BLAST of Sed0016679 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTV3	4.1e-12	40.96	Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S...	[more]
O65695	5.4e-12	46.27	Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S...	[more]
P0DKL1	1.0e-10	41.10	Auxin-responsive protein SAUR50 OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
P32295	8.6e-10	42.86	Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 ...	[more]
O64538	1.5e-09	39.39	Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S...	[more]

BLAST of Sed0016679 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IC38	1.5e-52	86.47	auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111471159...	[more]
A0A6J1EDQ2	1.5e-52	84.73	auxin-induced protein 15A OS=Cucurbita moschata OX=3662 GN=LOC111433233 PE=3 SV=...	[more]
A0A6J1BYB1	9.5e-52	84.44	auxin-responsive protein SAUR15 OS=Momordica charantia OX=3673 GN=LOC111005839 P...	[more]
A0A6J1HIA1	9.5e-52	83.82	auxin-induced protein 6B-like OS=Cucurbita moschata OX=3662 GN=LOC111463231 PE=3...	[more]
A0A6J1ILC7	4.7e-51	83.21	auxin-induced protein 15A-like OS=Cucurbita maxima OX=3661 GN=LOC111478079 PE=3 ...	[more]

BLAST of Sed0016679 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36210.1	2.3e-34	57.35	SAUR-like auxin-responsive protein family	[more]
AT5G20810.1	5.7e-17	51.43	SAUR-like auxin-responsive protein family	[more]
AT5G20810.2	5.7e-17	51.43	SAUR-like auxin-responsive protein family	[more]
AT3G43120.1	1.1e-15	46.91	SAUR-like auxin-responsive protein family	[more]
AT5G66260.1	5.9e-14	46.97	SAUR-like auxin-responsive protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 34..108 e-value: 2.2E-25 score: 88.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..52
None	No IPR available	PANTHER	PTHR31374	AUXIN-INDUCED PROTEIN-LIKE-RELATED	coord: 1..127
None	No IPR available	PANTHER	PTHR31374:SF28	SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY	coord: 1..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016679.1	Sed0016679.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin