Sed0016229 (gene) Chayote v1

Overview


Name	Sed0016229
Type	gene
Organism	Sechium edule (Chayote v1)
Description	fasciclin-like arabinogalactan protein 7
Location	LG04: 42927524 .. 42929343 (+)
RNA-Seq Expression	Sed0016229
Synteny	Sed0016229

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAACATTCAAAATGTTAGTGGCGGATTAGTTTCATTGTTTGATAATATTTCGGTTCTACTATACGATTACGAATTCGATCTTGAAAATTAAATTTAGACGAATTGGTGATTGGTTTGGTCCCAAAAAAAAAAAAAAAAACTTATGCCACCCCATATAGCATATTCACCCCTACCAATTACTTCTTTCTTCAAACCCTTTTCTCCATCATTTCTTTAAATACTTGCTTCAAATTTCAATCTTTATTTGAATTACTCATCCCCATTATTTGTCTGACAGAGAGTCTTCTCTTCCTTTGCTGGTCAGTATTCCTCTTATTGCCTCTTCCTTTTTGCATTGCTAATTTGATGCCTCTTTTAGCTTTGGTTTTGGCTTCTATCATTTCTCTTGAGCTGTTCTAGATCTGGGTTTTTTCTTGGGGGTGCTGTTTGTTTAGCTGGGCTTTGTGGGATGTAGCTAAGAGGAATGTGTGTGGTGGGTGTAGCCCTGATGGGACATTTTGAATTGTTTGCTTGTGTTTGTATGTCTTTGAATTAAGCTGTTCTTGTTTCTAGTTTTACTGTTTGATTTACTTCTCTGATTTTTTATTGTGCTTGACCTTTTTGCTGATATGTTTTTAGTGAGATCTGGATTTTGAGGGAGAGATACTACTGAGTTTCTCAACTTTTTTTTATTTAGTTTTGGCTGAGATTTGGTCAATTTGGGGAATTGTTCAATATATGGCCATGCATTTTATTGAAAAGGTTGCCTGAGTGCATATTAACTGTTTGTGAAAATGTCAATGTGAACTTGTGAAGTATATCAATTCTCATTGTGATTTGAAATTGTTTAAGATAACTGAGATCTGATGCTGGGAAGCTTTTTCCTCTGCAGGAAGTTGTGGGAAATGGAATTTTCCATGATTTTCACTGTTTGTAGTGCATTGTTGCTTCTTAGCTCTTCACCTGCAGATGCCCAAACAGCCAGCCCCCCTTTACTTAGCCCGACCCCAGCACCGGCGCCTGCCCCGGATTTCGTCAACCTTACAGATCTGCTAACTGTAGCTGGTCCATTTCACACCTTTCTCAGCTACCTGCAGTCCACCAAAGTTATTGACACCTTCCAAAACCAAGCCAATAACACAGAAGAAGGAGTGACCATCTTTGTCCCGAAAGACGGGGCTTTCTCGGCGCAAAAGAAACCGTCTCTCTCGAATCTCACCCAGGATCAGCTCAAGTCGCTTATCCTATTCCATGGCTTGCCACATTACTATTCCCTTTCTGATTTCAGGAACCTCAGCCTGCAGAATCCGATCCCAACTTTTGCTGGTGGGCAATATAGTTTGAACCTCACAGACGTTTCAGGGACCATCCACATTGGATCAGGTTGGACTAACACAAAAGTGAGTAGCAGTGTTCATTCAAGTGATCCTGTTGCAGTTTACCAAGTTGACAAAATTTTGCTGCCTGAGGCGATCTTCGGAACCGATATCCCACCGACCCCAGCCCCGGCACCAGCTCCCGATATCGCTCCTGCTGCAGATTCTCCTTCGGATGCTAGTGATACAAAGGCTGCTCCATCTTCAGAACCAAAGCCATCATCTTCCCATAAGATCATCAACTGGGGGATTTTGGTTCACATTGTTTTGGCAATTTCAGGTGGATTTTTGTTTTGATTGTTACCAGAAAATCCTACCACCCATTTATTTCATTAAGAAAAACTGTATTGGCATTTTGTTCTGTAATTGATGTGAAGCTCCATTTTTTGTGAACATATATGTTGTTGGATTTGTGCAACAGAATTTCTTTTGTGTGGCCTATAAATTATGATGTGGATTTTTTT

mRNA sequence

TAAACATTCAAAATGTTAGTGGCGGATTAGTTTCATTGTTTGATAATATTTCGGTTCTACTATACGATTACGAATTCGATCTTGAAAATTAAATTTAGACGAATTGGTGATTGGTTTGGTCCCAAAAAAAAAAAAAAAAACTTATGCCACCCCATATAGCATATTCACCCCTACCAATTACTTCTTTCTTCAAACCCTTTTCTCCATCATTTCTTTAAATACTTGCTTCAAATTTCAATCTTTATTTGAATTACTCATCCCCATTATTTGTCTGACAGAGAGTCTTCTCTTCCTTTGCTGGAAGTTGTGGGAAATGGAATTTTCCATGATTTTCACTGTTTGTAGTGCATTGTTGCTTCTTAGCTCTTCACCTGCAGATGCCCAAACAGCCAGCCCCCCTTTACTTAGCCCGACCCCAGCACCGGCGCCTGCCCCGGATTTCGTCAACCTTACAGATCTGCTAACTGTAGCTGGTCCATTTCACACCTTTCTCAGCTACCTGCAGTCCACCAAAGTTATTGACACCTTCCAAAACCAAGCCAATAACACAGAAGAAGGAGTGACCATCTTTGTCCCGAAAGACGGGGCTTTCTCGGCGCAAAAGAAACCGTCTCTCTCGAATCTCACCCAGGATCAGCTCAAGTCGCTTATCCTATTCCATGGCTTGCCACATTACTATTCCCTTTCTGATTTCAGGAACCTCAGCCTGCAGAATCCGATCCCAACTTTTGCTGGTGGGCAATATAGTTTGAACCTCACAGACGTTTCAGGGACCATCCACATTGGATCAGGTTGGACTAACACAAAAGTGAGTAGCAGTGTTCATTCAAGTGATCCTGTTGCAGTTTACCAAGTTGACAAAATTTTGCTGCCTGAGGCGATCTTCGGAACCGATATCCCACCGACCCCAGCCCCGGCACCAGCTCCCGATATCGCTCCTGCTGCAGATTCTCCTTCGGATGCTAGTGATACAAAGGCTGCTCCATCTTCAGAACCAAAGCCATCATCTTCCCATAAGATCATCAACTGGGGGATTTTGGTTCACATTGTTTTGGCAATTTCAGGTGGATTTTTGTTTTGATTGTTACCAGAAAATCCTACCACCCATTTATTTCATTAAGAAAAACTGTATTGGCATTTTGTTCTGTAATTGATGTGAAGCTCCATTTTTTGTGAACATATATGTTGTTGGATTTGTGCAACAGAATTTCTTTTGTGTGGCCTATAAATTATGATGTGGATTTTTTT

Coding sequence (CDS)

ATGGAATTTTCCATGATTTTCACTGTTTGTAGTGCATTGTTGCTTCTTAGCTCTTCACCTGCAGATGCCCAAACAGCCAGCCCCCCTTTACTTAGCCCGACCCCAGCACCGGCGCCTGCCCCGGATTTCGTCAACCTTACAGATCTGCTAACTGTAGCTGGTCCATTTCACACCTTTCTCAGCTACCTGCAGTCCACCAAAGTTATTGACACCTTCCAAAACCAAGCCAATAACACAGAAGAAGGAGTGACCATCTTTGTCCCGAAAGACGGGGCTTTCTCGGCGCAAAAGAAACCGTCTCTCTCGAATCTCACCCAGGATCAGCTCAAGTCGCTTATCCTATTCCATGGCTTGCCACATTACTATTCCCTTTCTGATTTCAGGAACCTCAGCCTGCAGAATCCGATCCCAACTTTTGCTGGTGGGCAATATAGTTTGAACCTCACAGACGTTTCAGGGACCATCCACATTGGATCAGGTTGGACTAACACAAAAGTGAGTAGCAGTGTTCATTCAAGTGATCCTGTTGCAGTTTACCAAGTTGACAAAATTTTGCTGCCTGAGGCGATCTTCGGAACCGATATCCCACCGACCCCAGCCCCGGCACCAGCTCCCGATATCGCTCCTGCTGCAGATTCTCCTTCGGATGCTAGTGATACAAAGGCTGCTCCATCTTCAGAACCAAAGCCATCATCTTCCCATAAGATCATCAACTGGGGGATTTTGGTTCACATTGTTTTGGCAATTTCAGGTGGATTTTTGTTTTGA

Protein sequence

MEFSMIFTVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFLSYLQSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPHYYSLSDFRNLSLQNPIPTFAGGQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDKILLPEAIFGTDIPPTPAPAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWGILVHIVLAISGGFLF

Homology

[Close]

BLAST of Sed0016229 vs. NCBI nr
Match: XP_004144534.1 (fasciclin-like arabinogalactan protein 7 [Cucumis sativus] >XP_031745158.1 fasciclin-like arabinogalactan protein 7 [Cucumis sativus] >KGN43447.1 hypothetical protein Csa_020154 [Cucumis sativus])

HSP 1 Score: 456.1 bits (1172), Expect = 2.0e-124
Identity = 235/255 (92.16%), Postives = 243/255 (95.29%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           M FSMIFTVCSALLLLSSS A+AQTASPP  SPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MGFSMIFTVCSALLLLSSSSANAQTASPPSFSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPH 120
           SYLQSTK IDTFQNQANNTEEGVTIFVPKD AFSAQKKPSLSNLT DQLKSLILFHGLPH
Sbjct: 61  SYLQSTKAIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTADQLKSLILFHGLPH 120

Query: 121 YYSLSDFRNLSLQNPIPTFAGGQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSL++FRNLSLQNPIPTFAGGQYSLN TDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWG 240
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAPAAD+PSD  D +AAPSSEPKPSSSH+IINWG
Sbjct: 181 VDKLLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSDVIDGRAAPSSEPKPSSSHRIINWG 240

Query: 241 ILVHIVLAISGGFLF 256
           IL+HIVL ISGGFLF
Sbjct: 241 ILIHIVLGISGGFLF 255

[Close]

BLAST of Sed0016229 vs. NCBI nr
Match: XP_008455511.1 (PREDICTED: fasciclin-like arabinogalactan protein 7 [Cucumis melo])

HSP 1 Score: 456.1 bits (1172), Expect = 2.0e-124
Identity = 235/255 (92.16%), Postives = 244/255 (95.69%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           M FSMIFTVCSALLLLSSS A+AQTASPP  SPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MGFSMIFTVCSALLLLSSSSANAQTASPPSFSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPH 120
           SYLQSTKVIDTFQNQANNTEEGVTIFVPKD AFSAQKKPSLSNLT DQLKSLILFHGLPH
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTADQLKSLILFHGLPH 120

Query: 121 YYSLSDFRNLSLQNPIPTFAGGQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSL++FRNLSLQNPIPTFAGGQ+SLN TDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIPTFAGGQFSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWG 240
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAPAAD+PSD  D +AAPSSEPKPSSSH+IINWG
Sbjct: 181 VDKLLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSDVIDGRAAPSSEPKPSSSHRIINWG 240

Query: 241 ILVHIVLAISGGFLF 256
           IL+HIVL ISGGFLF
Sbjct: 241 ILIHIVLGISGGFLF 255

[Close]

BLAST of Sed0016229 vs. NCBI nr
Match: KAA0059150.1 (fasciclin-like arabinogalactan protein 7 [Cucumis melo var. makuwa] >TYK02538.1 fasciclin-like arabinogalactan protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-123
Identity = 233/255 (91.37%), Postives = 243/255 (95.29%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           M F M+FTVCSALLLLSSS A+AQTASPP  SPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MGFFMVFTVCSALLLLSSSSANAQTASPPSFSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPH 120
           SYLQSTKVIDTFQNQANNTEEGVTIFVPKD AFSAQKKPSLSNLT DQLKSLILFHGLPH
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTADQLKSLILFHGLPH 120

Query: 121 YYSLSDFRNLSLQNPIPTFAGGQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSL++FRNLSLQNPIPTFAGGQ+SLN TDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIPTFAGGQFSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWG 240
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAPAAD+PSD  D +AAPSSEPKPSSSH+IINWG
Sbjct: 181 VDKLLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSDVIDGRAAPSSEPKPSSSHRIINWG 240

Query: 241 ILVHIVLAISGGFLF 256
           IL+HIVL ISGGFLF
Sbjct: 241 ILIHIVLGISGGFLF 255

[Close]

BLAST of Sed0016229 vs. NCBI nr
Match: XP_038888065.1 (fasciclin-like arabinogalactan protein 7 [Benincasa hispida])

HSP 1 Score: 449.5 bits (1155), Expect = 1.9e-122
Identity = 232/255 (90.98%), Postives = 241/255 (94.51%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           M+FSMIFTVCSALLLLSSS A+AQTASPP LSPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MDFSMIFTVCSALLLLSSSSANAQTASPPSLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPH 120
            YLQSTKVIDTFQNQANNTEEGVTIFVPKD AFSAQKKPSLSNLT+DQLKSLILFHGLPH
Sbjct: 61  GYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLILFHGLPH 120

Query: 121 YYSLSDFRNLSLQNPIPTFAGGQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSL++FRNLSLQNPIPTFAGGQYSLN TDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWG 240
           VDK+LLPEAIFGTDIPPTPAPAP PDIAP AD+PS  SD K APSSEPKPSSS +IINWG
Sbjct: 181 VDKLLLPEAIFGTDIPPTPAPAPTPDIAPVADAPSAVSDGKVAPSSEPKPSSSDRIINWG 240

Query: 241 ILVHIVLAISGGFLF 256
           I + IVLAISGGFLF
Sbjct: 241 IFIQIVLAISGGFLF 255

[Close]

BLAST of Sed0016229 vs. NCBI nr
Match: XP_022930610.1 (fasciclin-like arabinogalactan protein 7 [Cucurbita moschata] >KAG7022824.1 Fasciclin-like arabinogalactan protein 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 448.7 bits (1153), Expect = 3.3e-122
Identity = 234/257 (91.05%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           ME SMIFTVCSALLLLSSSPADA+TASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPH 120
           SYLQSTKVI+TFQNQANNTEEGVTIFVPKD AFSAQKKPSLSNLT+DQLKSL+LFHGLPH
Sbjct: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120

Query: 121 YYSLSDFRNLSLQNPIPTFAGGQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSL++FRNLSLQNPI T AGGQYSLN TDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPD--IAPAADSPSDASDTKAAPSSEPKPSSSHKIIN 240
           VD+ILLPEAIFGTDIPPTPAPAPAPD  IAP ADSPS  SD KAAPSS+PKPSSSH+IIN
Sbjct: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 240

Query: 241 WGILVHIVLAISGGFLF 256
           WGIL+H+VLAIS GFLF
Sbjct: 241 WGILIHVVLAISCGFLF 257

[Close]

BLAST of Sed0016229 vs. ExPASy Swiss-Prot
Match: Q9SJ81 (Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana OX=3702 GN=FLA7 PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.3e-78
Identity = 167/251 (66.53%), Postives = 196/251 (78.09%), Query Frame = 0


Query: 6   IFTVCSALLLLSSSPADAQTASP--PLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFLSYL 65
           IF    AL++ S+S   A+TASP  P+L PTPAPAPAP+ VNLT+LL+VAGPFHTFL YL
Sbjct: 8   IFIAVVALIVCSAS---AKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFHTFLDYL 67

Query: 66  QSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPHYYS 125
            ST VI+TFQNQANNTEEG+TIFVPKD AF AQK P LSNLT+DQLK L+LFH LPHYYS
Sbjct: 68  LSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYS 127

Query: 126 LSDFRNLSLQNPIPTFAGGQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDK 185
           LS+F+NLS   P+ TFAGGQYSL  TDVSGT+ I S WT TKVSSSV S+DPVAVYQV++
Sbjct: 128 LSEFKNLSQSGPVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAVYQVNR 187

Query: 186 ILLPEAIFGTDIPPTPAPAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWG--- 245
           +LLPEAIFGTD+PP PAPAPAP ++  +DSPS  +D++ A S    P SSHK  N G   
Sbjct: 188 VLLPEAIFGTDVPPMPAPAPAPIVSAPSDSPS-VADSEGASS----PKSSHK--NSGQKL 247

Query: 246 ILVHIVLAISG 252
           +L  I + ISG
Sbjct: 248 LLAPISMVISG 248

[Close]

BLAST of Sed0016229 vs. ExPASy Swiss-Prot
Match: Q8LEE9 (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 3.8e-33
Identity = 98/234 (41.88%), Postives = 138/234 (58.97%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDF-VNLTDLLTVAGPFHTF 60
           ME S+I  + + LLLL+++P         L  P+PA APAP    N+T +L  AG F  F
Sbjct: 1   MEHSLIILLFTVLLLLTTTPG-------ILSQPSPAVAPAPPGPTNVTKILEKAGQFTVF 60

Query: 61  LSYLQSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLP 120
           +  L+ST V +    Q NN++ G+TIF P D +F+  K  +L++LT +Q   LI FH +P
Sbjct: 61  IRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIP 120

Query: 121 HYYSLSDFRNLSLQNPIPTFAG----GQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDP 180
            Y S S+F+ +S  NP+ T AG    G + LN+T    T++I SG TNT VS +V+S   
Sbjct: 121 SYVSSSNFQTIS--NPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQ 180

Query: 181 VAVYQVDKILLPEAIFGTDIPPTPAPAPAPDIAPAA-----------DSPSDAS 219
           +AVYQVDK+LLP+ +F    P  PAPAPAP ++ +            DSP+DAS
Sbjct: 181 LAVYQVDKVLLPQQVFD---PRPPAPAPAPSVSKSKKKKDDSDSSSDDSPADAS 222

[Close]

BLAST of Sed0016229 vs. ExPASy Swiss-Prot
Match: Q9ZWA8 (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.7e-25
Identity = 94/253 (37.15%), Postives = 128/253 (50.59%), Query Frame = 0


Query: 8   TVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFLSYLQSTK 67
           T+   LL+ +   A   TA P      PAP PA   +NLT +L   G F TF+  L  T+
Sbjct: 7   TLAPLLLIAAVLLATKATAQP----AAPAPEPAGP-INLTAILEKGGQFTTFIHLLNITQ 66

Query: 68  VIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPHYYSLSDF 127
           V      Q N++ EG+T+F P D AF   K  +L+ L+ D    LIL+H  P YYS+ D 
Sbjct: 67  VGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDL 126

Query: 128 RNLSLQNPIPTFAGGQ----YSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDK 187
             LS+ NP+ T A G+    Y LN T  +  I++ +G+  T++S+S+    P+AVY VD 
Sbjct: 127 --LSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDM 186

Query: 188 ILLPEAIFGTDIPPTPAPAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWGI-L 247
           +LLP  +FG       APAP        D   D+  TK A S   K  S  K +  G  L
Sbjct: 187 VLLPGEMFGEHKLSPIAPAPKSKSGGVTD---DSGSTKKAASPSDKSGSGEKKVGLGFGL 246

Query: 248 VHIVLAISGGFLF 256
             IVL +   FLF
Sbjct: 247 GLIVLCLK--FLF 247

[Close]

BLAST of Sed0016229 vs. ExPASy Swiss-Prot
Match: Q9SIL7 (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6 PE=2 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 5.0e-25
Identity = 86/228 (37.72%), Postives = 125/228 (54.82%), Query Frame = 0


Query: 28  PPLLSPTPAPAPAPDF--VNLTDLLTVAGPFHTFLSYLQSTKVIDTFQNQANNTEEGVTI 87
           P + S   APAP  +   +NLT +L     F T +  L +T+V      Q N++++G+TI
Sbjct: 19  PYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTI 78

Query: 88  FVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPHYYSLSDFRNLSLQNPIPTFA----G 147
           F P D AF+  K  +L++LT  Q   L+L+H +P YYSLSD   L   NP+ T A    G
Sbjct: 79  FAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDL--LLASNPVRTQATGQDG 138

Query: 148 GQYSLNLTD--VSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDKILLPEAIFGTDIPPTP 207
           G + LN T    S  +++ +G   T++++++    P+AVY VD +LLPE +FGT   PT 
Sbjct: 139 GVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFGTKTTPTG 198

Query: 208 APAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWGILVHIVL 248
           APAP      ++ S SDA D+ AA        SS K  + GI+V   L
Sbjct: 199 APAP-----KSSTSSSDA-DSPAADDEHKSAGSSVKRTSLGIVVSFAL 238

[Close]

BLAST of Sed0016229 vs. ExPASy Swiss-Prot
Match: Q8LEJ6 (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-23
Identity = 72/198 (36.36%), Postives = 113/198 (57.07%), Query Frame = 0


Query: 36  APAPAPDF-VNLTDLLTVAGPFHTFLSYLQSTKVIDTFQNQAN-NTEEGVTIFVPKDGAF 95
           APAP P    N+T +L  AG F  F+  L+ST+  D    Q N ++  G+T+F P D AF
Sbjct: 26  APAPGPSGPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLNSSSSNGLTVFAPTDNAF 85

Query: 96  SAQKKPSLSNLTQDQLKSLILFHGLPHYYSLSDFRNLSLQNPIPTFAG----GQYSLNLT 155
           ++ K  +L++L+  Q   L+ FH LP   ++  F+ +S  NP+ T AG    G++ LN+T
Sbjct: 86  NSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVS--NPLRTQAGDGQNGKFPLNIT 145

Query: 156 DVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDKILLPEAIFGTDIPPTPAPAPAPDI-- 215
                ++I +G  +  V++SV+S   +AVYQVD++LLP A+FG+ + P PAP     +  
Sbjct: 146 SSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMFGSSVAPAPAPEKGGSVSK 205

Query: 216 --APAADSPSDASDTKAA 224
             A   D   D++D+  A
Sbjct: 206 GSASGGDDGGDSTDSSDA 221

[Close]

BLAST of Sed0016229 vs. ExPASy TrEMBL
Match: A0A0A0K597 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G037510 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 9.9e-125
Identity = 235/255 (92.16%), Postives = 243/255 (95.29%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           M FSMIFTVCSALLLLSSS A+AQTASPP  SPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MGFSMIFTVCSALLLLSSSSANAQTASPPSFSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPH 120
           SYLQSTK IDTFQNQANNTEEGVTIFVPKD AFSAQKKPSLSNLT DQLKSLILFHGLPH
Sbjct: 61  SYLQSTKAIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTADQLKSLILFHGLPH 120

Query: 121 YYSLSDFRNLSLQNPIPTFAGGQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSL++FRNLSLQNPIPTFAGGQYSLN TDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIPTFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWG 240
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAPAAD+PSD  D +AAPSSEPKPSSSH+IINWG
Sbjct: 181 VDKLLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSDVIDGRAAPSSEPKPSSSHRIINWG 240

Query: 241 ILVHIVLAISGGFLF 256
           IL+HIVL ISGGFLF
Sbjct: 241 ILIHIVLGISGGFLF 255

[Close]

BLAST of Sed0016229 vs. ExPASy TrEMBL
Match: A0A1S3C2C3 (fasciclin-like arabinogalactan protein 7 OS=Cucumis melo OX=3656 GN=LOC103495664 PE=3 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 9.9e-125
Identity = 235/255 (92.16%), Postives = 244/255 (95.69%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           M FSMIFTVCSALLLLSSS A+AQTASPP  SPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MGFSMIFTVCSALLLLSSSSANAQTASPPSFSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPH 120
           SYLQSTKVIDTFQNQANNTEEGVTIFVPKD AFSAQKKPSLSNLT DQLKSLILFHGLPH
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTADQLKSLILFHGLPH 120

Query: 121 YYSLSDFRNLSLQNPIPTFAGGQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSL++FRNLSLQNPIPTFAGGQ+SLN TDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIPTFAGGQFSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWG 240
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAPAAD+PSD  D +AAPSSEPKPSSSH+IINWG
Sbjct: 181 VDKLLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSDVIDGRAAPSSEPKPSSSHRIINWG 240

Query: 241 ILVHIVLAISGGFLF 256
           IL+HIVL ISGGFLF
Sbjct: 241 ILIHIVLGISGGFLF 255

[Close]

BLAST of Sed0016229 vs. ExPASy TrEMBL
Match: A0A5D3BU74 (Fasciclin-like arabinogalactan protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00170 PE=3 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.4e-124
Identity = 233/255 (91.37%), Postives = 243/255 (95.29%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           M F M+FTVCSALLLLSSS A+AQTASPP  SPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MGFFMVFTVCSALLLLSSSSANAQTASPPSFSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPH 120
           SYLQSTKVIDTFQNQANNTEEGVTIFVPKD AFSAQKKPSLSNLT DQLKSLILFHGLPH
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTADQLKSLILFHGLPH 120

Query: 121 YYSLSDFRNLSLQNPIPTFAGGQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSL++FRNLSLQNPIPTFAGGQ+SLN TDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIPTFAGGQFSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWG 240
           VDK+LLPEAIFGTDIPPTPAPAPAPDIAPAAD+PSD  D +AAPSSEPKPSSSH+IINWG
Sbjct: 181 VDKLLLPEAIFGTDIPPTPAPAPAPDIAPAADAPSDVIDGRAAPSSEPKPSSSHRIINWG 240

Query: 241 ILVHIVLAISGGFLF 256
           IL+HIVL ISGGFLF
Sbjct: 241 ILIHIVLGISGGFLF 255

[Close]

BLAST of Sed0016229 vs. ExPASy TrEMBL
Match: A0A6J1C1K1 (fasciclin-like arabinogalactan protein 7 OS=Momordica charantia OX=3673 GN=LOC111007542 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.6e-122
Identity = 232/255 (90.98%), Postives = 241/255 (94.51%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           MEFSMIFTVCSALLLLSSS ADAQTASPP LSPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MEFSMIFTVCSALLLLSSSAADAQTASPPSLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPH 120
           SYLQSTKVIDTFQNQANNTEEGVTIFVPKD AFSAQKKPSLSNLT+DQLKSLILFHGLPH
Sbjct: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLILFHGLPH 120

Query: 121 YYSLSDFRNLSLQNPIPTFAGGQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSL++FRNLSLQNPI TFAGGQYSLN TDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPIATFAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWG 240
           VDKILLPEAIFGTDIPPTPAPAPAPD+ P AD+PS   + K APSS PKPSSSHKII+WG
Sbjct: 181 VDKILLPEAIFGTDIPPTPAPAPAPDVTPPADAPSADHEGKVAPSSGPKPSSSHKIISWG 240

Query: 241 ILVHIVLAISGGFLF 256
           +L+HIVLAIS GFLF
Sbjct: 241 VLIHIVLAISAGFLF 255

[Close]

BLAST of Sed0016229 vs. ExPASy TrEMBL
Match: A0A6J1EXB2 (fasciclin-like arabinogalactan protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111437019 PE=3 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 1.6e-122
Identity = 234/257 (91.05%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60
           ME SMIFTVCSALLLLSSSPADA+TASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL
Sbjct: 1   MELSMIFTVCSALLLLSSSPADAKTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFL 60

Query: 61  SYLQSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPH 120
           SYLQSTKVI+TFQNQANNTEEGVTIFVPKD AFSAQKKPSLSNLT+DQLKSL+LFHGLPH
Sbjct: 61  SYLQSTKVIETFQNQANNTEEGVTIFVPKDSAFSAQKKPSLSNLTEDQLKSLMLFHGLPH 120

Query: 121 YYSLSDFRNLSLQNPIPTFAGGQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180
           YYSL++FRNLSLQNPI T AGGQYSLN TDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ
Sbjct: 121 YYSLAEFRNLSLQNPISTLAGGQYSLNFTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQ 180

Query: 181 VDKILLPEAIFGTDIPPTPAPAPAPD--IAPAADSPSDASDTKAAPSSEPKPSSSHKIIN 240
           VD+ILLPEAIFGTDIPPTPAPAPAPD  IAP ADSPS  SD KAAPSS+PKPSSSH+IIN
Sbjct: 181 VDRILLPEAIFGTDIPPTPAPAPAPDIAIAPTADSPSADSDGKAAPSSQPKPSSSHRIIN 240

Query: 241 WGILVHIVLAISGGFLF 256
           WGIL+H+VLAIS GFLF
Sbjct: 241 WGILIHVVLAISCGFLF 257

[Close]

BLAST of Sed0016229 vs. TAIR 10
Match: AT2G04780.1 (FASCICLIN-like arabinoogalactan 7 )

HSP 1 Score: 294.3 bits (752), Expect = 9.6e-80
Identity = 167/251 (66.53%), Postives = 196/251 (78.09%), Query Frame = 0


Query: 6   IFTVCSALLLLSSSPADAQTASP--PLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFLSYL 65
           IF    AL++ S+S   A+TASP  P+L PTPAPAPAP+ VNLT+LL+VAGPFHTFL YL
Sbjct: 8   IFIAVVALIVCSAS---AKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFHTFLDYL 67

Query: 66  QSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPHYYS 125
            ST VI+TFQNQANNTEEG+TIFVPKD AF AQK P LSNLT+DQLK L+LFH LPHYYS
Sbjct: 68  LSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYS 127

Query: 126 LSDFRNLSLQNPIPTFAGGQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDK 185
           LS+F+NLS   P+ TFAGGQYSL  TDVSGT+ I S WT TKVSSSV S+DPVAVYQV++
Sbjct: 128 LSEFKNLSQSGPVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAVYQVNR 187

Query: 186 ILLPEAIFGTDIPPTPAPAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWG--- 245
           +LLPEAIFGTD+PP PAPAPAP ++  +DSPS  +D++ A S    P SSHK  N G   
Sbjct: 188 VLLPEAIFGTDVPPMPAPAPAPIVSAPSDSPS-VADSEGASS----PKSSHK--NSGQKL 247

Query: 246 ILVHIVLAISG 252
           +L  I + ISG
Sbjct: 248 LLAPISMVISG 248

[Close]

BLAST of Sed0016229 vs. TAIR 10
Match: AT2G04780.2 (FASCICLIN-like arabinoogalactan 7 )

HSP 1 Score: 294.3 bits (752), Expect = 9.6e-80
Identity = 167/251 (66.53%), Postives = 196/251 (78.09%), Query Frame = 0


Query: 6   IFTVCSALLLLSSSPADAQTASP--PLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFLSYL 65
           IF    AL++ S+S   A+TASP  P+L PTPAPAPAP+ VNLT+LL+VAGPFHTFL YL
Sbjct: 8   IFIAVVALIVCSAS---AKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFHTFLDYL 67

Query: 66  QSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPHYYS 125
            ST VI+TFQNQANNTEEG+TIFVPKD AF AQK P LSNLT+DQLK L+LFH LPHYYS
Sbjct: 68  LSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYS 127

Query: 126 LSDFRNLSLQNPIPTFAGGQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDK 185
           LS+F+NLS   P+ TFAGGQYSL  TDVSGT+ I S WT TKVSSSV S+DPVAVYQV++
Sbjct: 128 LSEFKNLSQSGPVSTFAGGQYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPVAVYQVNR 187

Query: 186 ILLPEAIFGTDIPPTPAPAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWG--- 245
           +LLPEAIFGTD+PP PAPAPAP ++  +DSPS  +D++ A S    P SSHK  N G   
Sbjct: 188 VLLPEAIFGTDVPPMPAPAPAPIVSAPSDSPS-VADSEGASS----PKSSHK--NSGQKL 247

Query: 246 ILVHIVLAISG 252
           +L  I + ISG
Sbjct: 248 LLAPISMVISG 248

[Close]

BLAST of Sed0016229 vs. TAIR 10
Match: AT5G60490.1 (FASCICLIN-like arabinogalactan-protein 12 )

HSP 1 Score: 143.3 bits (360), Expect = 2.7e-34
Identity = 98/234 (41.88%), Postives = 138/234 (58.97%), Query Frame = 0


Query: 1   MEFSMIFTVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDF-VNLTDLLTVAGPFHTF 60
           ME S+I  + + LLLL+++P         L  P+PA APAP    N+T +L  AG F  F
Sbjct: 1   MEHSLIILLFTVLLLLTTTPG-------ILSQPSPAVAPAPPGPTNVTKILEKAGQFTVF 60

Query: 61  LSYLQSTKVIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLP 120
           +  L+ST V +    Q NN++ G+TIF P D +F+  K  +L++LT +Q   LI FH +P
Sbjct: 61  IRLLKSTGVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIP 120

Query: 121 HYYSLSDFRNLSLQNPIPTFAG----GQYSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDP 180
            Y S S+F+ +S  NP+ T AG    G + LN+T    T++I SG TNT VS +V+S   
Sbjct: 121 SYVSSSNFQTIS--NPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQ 180

Query: 181 VAVYQVDKILLPEAIFGTDIPPTPAPAPAPDIAPAA-----------DSPSDAS 219
           +AVYQVDK+LLP+ +F    P  PAPAPAP ++ +            DSP+DAS
Sbjct: 181 LAVYQVDKVLLPQQVFD---PRPPAPAPAPSVSKSKKKKDDSDSSSDDSPADAS 222

[Close]

BLAST of Sed0016229 vs. TAIR 10
Match: AT1G03870.1 (FASCICLIN-like arabinoogalactan 9 )

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-26
Identity = 94/253 (37.15%), Postives = 128/253 (50.59%), Query Frame = 0


Query: 8   TVCSALLLLSSSPADAQTASPPLLSPTPAPAPAPDFVNLTDLLTVAGPFHTFLSYLQSTK 67
           T+   LL+ +   A   TA P      PAP PA   +NLT +L   G F TF+  L  T+
Sbjct: 7   TLAPLLLIAAVLLATKATAQP----AAPAPEPAGP-INLTAILEKGGQFTTFIHLLNITQ 66

Query: 68  VIDTFQNQANNTEEGVTIFVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPHYYSLSDF 127
           V      Q N++ EG+T+F P D AF   K  +L+ L+ D    LIL+H  P YYS+ D 
Sbjct: 67  VGSQVNIQVNSSSEGMTVFAPTDNAFQNLKPGTLNQLSPDDQVKLILYHVSPKYYSMDDL 126

Query: 128 RNLSLQNPIPTFAGGQ----YSLNLTDVSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDK 187
             LS+ NP+ T A G+    Y LN T  +  I++ +G+  T++S+S+    P+AVY VD 
Sbjct: 127 --LSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRISNSLRQQRPLAVYVVDM 186

Query: 188 ILLPEAIFGTDIPPTPAPAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWGI-L 247
           +LLP  +FG       APAP        D   D+  TK A S   K  S  K +  G  L
Sbjct: 187 VLLPGEMFGEHKLSPIAPAPKSKSGGVTD---DSGSTKKAASPSDKSGSGEKKVGLGFGL 246

Query: 248 VHIVLAISGGFLF 256
             IVL +   FLF
Sbjct: 247 GLIVLCLK--FLF 247

[Close]

BLAST of Sed0016229 vs. TAIR 10
Match: AT2G20520.1 (FASCICLIN-like arabinogalactan 6 )

HSP 1 Score: 116.3 bits (290), Expect = 3.6e-26
Identity = 86/228 (37.72%), Postives = 125/228 (54.82%), Query Frame = 0


Query: 28  PPLLSPTPAPAPAPDF--VNLTDLLTVAGPFHTFLSYLQSTKVIDTFQNQANNTEEGVTI 87
           P + S   APAP  +   +NLT +L     F T +  L +T+V      Q N++++G+TI
Sbjct: 19  PYIQSQPTAPAPTTEKSPINLTAILEAGHQFTTLIQLLNTTQVGFQVSVQLNSSDQGMTI 78

Query: 88  FVPKDGAFSAQKKPSLSNLTQDQLKSLILFHGLPHYYSLSDFRNLSLQNPIPTFA----G 147
           F P D AF+  K  +L++LT  Q   L+L+H +P YYSLSD   L   NP+ T A    G
Sbjct: 79  FAPTDNAFNKLKPGTLNSLTYQQQIQLMLYHIIPKYYSLSDL--LLASNPVRTQATGQDG 138

Query: 148 GQYSLNLTD--VSGTIHIGSGWTNTKVSSSVHSSDPVAVYQVDKILLPEAIFGTDIPPTP 207
           G + LN T    S  +++ +G   T++++++    P+AVY VD +LLPE +FGT   PT 
Sbjct: 139 GVFGLNFTGQAQSNQVNVSTGVVETRINNALRQQFPLAVYVVDSVLLPEELFGTKTTPTG 198

Query: 208 APAPAPDIAPAADSPSDASDTKAAPSSEPKPSSSHKIINWGILVHIVL 248
           APAP      ++ S SDA D+ AA        SS K  + GI+V   L
Sbjct: 199 APAP-----KSSTSSSDA-DSPAADDEHKSAGSSVKRTSLGIVVSFAL 238

The following BLAST results are available for this feature:

BLAST of Sed0016229 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144534.1	2.0e-124	92.16	fasciclin-like arabinogalactan protein 7 [Cucumis sativus] >XP_031745158.1 fasci...	[more]
XP_008455511.1	2.0e-124	92.16	PREDICTED: fasciclin-like arabinogalactan protein 7 [Cucumis melo]	[more]
KAA0059150.1	1.3e-123	91.37	fasciclin-like arabinogalactan protein 7 [Cucumis melo var. makuwa] >TYK02538.1 ...	[more]
XP_038888065.1	1.9e-122	90.98	fasciclin-like arabinogalactan protein 7 [Benincasa hispida]	[more]
XP_022930610.1	3.3e-122	91.05	fasciclin-like arabinogalactan protein 7 [Cucurbita moschata] >KAG7022824.1 Fasc...	[more]

BLAST of Sed0016229 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJ81	1.3e-78	66.53	Fasciclin-like arabinogalactan protein 7 OS=Arabidopsis thaliana OX=3702 GN=FLA7...	[more]
Q8LEE9	3.8e-33	41.88	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9ZWA8	1.7e-25	37.15	Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9...	[more]
Q9SIL7	5.0e-25	37.72	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6...	[more]
Q8LEJ6	1.6e-23	36.36	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]

BLAST of Sed0016229 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K597	9.9e-125	92.16	FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G037510 PE=3 S...	[more]
A0A1S3C2C3	9.9e-125	92.16	fasciclin-like arabinogalactan protein 7 OS=Cucumis melo OX=3656 GN=LOC103495664...	[more]
A0A5D3BU74	6.4e-124	91.37	Fasciclin-like arabinogalactan protein 7 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1C1K1	1.6e-122	90.98	fasciclin-like arabinogalactan protein 7 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1EXB2	1.6e-122	91.05	fasciclin-like arabinogalactan protein 7 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Sed0016229 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04780.1	9.6e-80	66.53	FASCICLIN-like arabinoogalactan 7	[more]
AT2G04780.2	9.6e-80	66.53	FASCICLIN-like arabinoogalactan 7	[more]
AT5G60490.1	2.7e-34	41.88	FASCICLIN-like arabinogalactan-protein 12	[more]
AT1G03870.1	1.2e-26	37.15	FASCICLIN-like arabinoogalactan 9	[more]
AT2G20520.1	3.6e-26	37.72	FASCICLIN-like arabinogalactan 6	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000782	FAS1 domain	SMART	SM00554	fasc_3	coord: 84..188 e-value: 7.4E-22 score: 88.6
IPR000782	FAS1 domain	PFAM	PF02469	Fasciclin	coord: 56..187 e-value: 2.5E-20 score: 73.0
IPR000782	FAS1 domain	PROSITE	PS50213	FAS1	coord: 43..185 score: 18.438955
IPR036378	FAS1 domain superfamily	GENE3D	2.30.180.10	FAS1 domain	coord: 44..188 e-value: 4.0E-16 score: 61.6
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 36..188
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..233
None	No IPR available	PANTHER	PTHR32077:SF70	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7	coord: 2..253
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 2..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0016229.2	Sed0016229.2	mRNA
Sed0016229.1	Sed0016229.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009834	plant-type secondary cell wall biogenesis
cellular_component	GO:0005886	plasma membrane