Sed0016205 (gene) Chayote v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTTCTTCTAATGGCTTCACCAGATTTGGCAGCTAACACCAGTTCCTCTTGCCATCACAATGTGGCTGGTTCGAGGGTGAAGAGGACGAGAAGAGAAGCACGTGAGGTTCGTCGGAAAGTTCAGAAGCTGCGGTGGGTGGTGCCGGGTGCCCGAGGGTTGCGACAGGAACATCTCTTTGCCAAGACGGCTCGTTACATATTGAATTTGAGATTGAAAGTCTGTGCTCTTGAAACCATTCTGAAATTGCAGGGCGAGGCTTGACAATGTCTTATGATATCAACATTTTTCTCTGTTTATTTTTCTTTAATTTTGTTTCTGTGGATCTGGTTGACATTGGAACAGGCATCTGATATTCGTAGTCACATTGTGGAATGTTTATTATATATTTATGTTATATACAGGTAGAAGCATCCATTTTTTTACTTTTTTCAAGCACAGTTGGATTGACACAACTTCAACCTATTTTTGGATTCTATTGGAGATAC GTTTCTTCTAATGGCTTCACCAGATTTGGCAGCTAACACCAGTTCCTCTTGCCATCACAATGTGGCTGGTTCGAGGGTGAAGAGGACGAGAAGAGAAGCACGTGAGGTTCGTCGGAAAGTTCAGAAGCTGCGGTGGGTGGTGCCGGGTGCCCGAGGGTTGCGACAGGAACATCTCTTTGCCAAGACGGCTCGTTACATATTGAATTTGAGATTGAAAGTCTGTGCTCTTGAAACCATTCTGAAATTGCAGGGCGAGGCTTGACAATGTCTTATGATATCAACATTTTTCTCTGTTTATTTTTCTTTAATTTTGTTTCTGTGGATCTGGTTGACATTGGAACAGGCATCTGATATTCGTAGTCACATTGTGGAATGTTTATTATATATTTATGTTATATACAGGTAGAAGCATCCATTTTTTTACTTTTTTCAAGCACAGTTGGATTGACACAACTTCAACCTATTTTTGGATTCTATTGGAGATAC ATGGCTTCACCAGATTTGGCAGCTAACACCAGTTCCTCTTGCCATCACAATGTGGCTGGTTCGAGGGTGAAGAGGACGAGAAGAGAAGCACGTGAGGTTCGTCGGAAAGTTCAGAAGCTGCGGTGGGTGGTGCCGGGTGCCCGAGGGTTGCGACAGGAACATCTCTTTGCCAAGACGGCTCGTTACATATTGAATTTGAGATTGAAAGTCTGTGCTCTTGAAACCATTCTGAAATTGCAGGGCGAGGCTTGA MASPDLAANTSSSCHHNVAGSRVKRTRREAREVRRKVQKLRWVVPGARGLRQEHLFAKTARYILNLRLKVCALETILKLQGEA Homology
BLAST of Sed0016205 vs. NCBI nr
Match: KAA0055213.1 (transcription factor PAR1-like [Cucumis melo var. makuwa] >TYJ99143.1 transcription factor PAR1-like [Cucumis melo var. makuwa]) HSP 1 Score: 122.1 bits (305), Expect = 2.3e-24 Identity = 63/81 (77.78%), Postives = 70/81 (86.42%), Query Frame = 0
BLAST of Sed0016205 vs. NCBI nr
Match: KAG7019830.1 (hypothetical protein SDJN02_18794, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 109.0 bits (271), Expect = 2.0e-20 Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of Sed0016205 vs. NCBI nr
Match: KAG6584233.1 (hypothetical protein SDJN03_20165, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 109.0 bits (271), Expect = 2.0e-20 Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of Sed0016205 vs. NCBI nr
Match: KAG6573044.1 (Ubiquitin-conjugating enzyme E2 5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 91.7 bits (226), Expect = 3.3e-15 Identity = 51/79 (64.56%), Postives = 59/79 (74.68%), Query Frame = 0
BLAST of Sed0016205 vs. NCBI nr
Match: KAE8124179.1 (hypothetical protein FH972_019086 [Carpinus fangiana]) HSP 1 Score: 58.2 bits (139), Expect = 4.0e-05 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of Sed0016205 vs. ExPASy TrEMBL
Match: A0A5A7UGX9 (Transcription factor PAR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G003490 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24 Identity = 63/81 (77.78%), Postives = 70/81 (86.42%), Query Frame = 0
BLAST of Sed0016205 vs. ExPASy TrEMBL
Match: A0A5N6RR97 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_019086 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.0e-05 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of Sed0016205 vs. ExPASy TrEMBL
Match: A0A0A0LQU9 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G045930 PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.5e-05 Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of Sed0016205 vs. ExPASy TrEMBL
Match: A0A438EHL0 (BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_070132 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.4e-05 Identity = 30/62 (48.39%), Postives = 47/62 (75.81%), Query Frame = 0
BLAST of Sed0016205 vs. ExPASy TrEMBL
Match: A0A438JND2 (BHLH domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_016970 PE=4 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.4e-05 Identity = 30/62 (48.39%), Postives = 47/62 (75.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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