Sed0015994 (gene) Chayote v1

Overview


Name	Sed0015994
Type	gene
Organism	Sechium edule (Chayote v1)
Description	CSL zinc finger domain-containing protein
Location	LG02: 41601321 .. 41604786 (+)
RNA-Seq Expression	Sed0015994
Synteny	Sed0015994

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTGGTCGGCGGAAATTTCCAATTCCAATTCAACCATGGCGATTTCCGATCTCTCACCGGCGTCCGCCGTGCTGCTTCTGTTGTTGACGGCGGCGGTTCTCGAAGCTAGAGACACCAACCGAGCTTTCAACCCTTGCACCGACACGACGGTTCAGAAGTCCGACGGTTTCACCTTGGGGCTTGCCTTCGCGACGGAGCAGATGTTCGTCTTCAACAAGACCTTGAAGTTGTCTCCATGTGACAGCAGGCTTTCTCTTTCGAATGGAAATTCTCTTCTCTCCGTGTTTAGGCCTAAGGTTGATCAGATCTCCCTCCTCACCGTCAATACCTCTACCCGCGTGTCTAACTTGAATCCGGTTAGTTCTTCAAGCTTTGTGTTCTTTGTTGATTTTGAATTTATCTATTGTTTCTGTTTGATCTTTGTTTTAAGTTGATGCTAGTTCTGGAATTAGGTTTTTGTGTTTATGATTTGGAATGGGTTTTAGGTTTTGTGGGATCGGAGTTATTGGTTTGTGTAAATCTTCAATCGAATATGGATTTGGTTTCTAAAACCTTACTCCTTAGCTCGAAACAGGGAGGCGAACAGAACAGATCCTTGTGGAATCGTTTTGCATACTTTAATTGCATTATGCTAGCTCAATTTGATTTGGGATATTTTGGCTGTGGATTTTTCTTTGAGTGAAATTAATAACCAATCGTAATTGGTTGATATTCTGCGCGATCCAATTTGACACAAGCAACTCAAATGTTACATCAGTTGAAATAATAAGGGACTTCATTGATGCTGGGAATAGCACAAGTAGCAATCAGTTCACTTTCGGATGGCGATCTTGGCCAGGATTATCAATAGTAAATGACTAACTAAATGTCTAAACACTTTCGATTTAGCGATGATGATCAGGAATCAACAAGATTCGCACAAAGATTCATCGGTTCTCGGCCGAGAAGAGAAAATGAAAATCACCTTCCTCCTCTTTTAAGCTACACCCAAATTCATCTCTCTCACTACACCTTCATATTTTCCCTTCACAGCCATGTCCAAGCCTCCTCTGCATCTTTATCTCTCTCCAAAAGCCTGGCATCCAAACAAATTGCCCATTTTCAGCTTGAAATGGGTGCAAAAATCACAATTAGAAGAACAAAAAAGGAGCAGGAAGGTATTTTACCAAGTTGGACTGGTCACAAAGTTAGTCCTAATGCATAGTAGTTTCAACTTTCAGCGTGGGGTTTTCTTCTTCACTGCATTTCTTAGAGACCTGAGTTTTTCTTCTTTCTCGGTCGTCATCCCGGGCAAAATTATCACCAGGAAGTGCTATGGAAACCAAAAAATATTTCTTCCCTTGGTCAATCTCGGCCAGGTGGCACCTAGATGTTCTATGGAAACAACTTTTGTTAAAAATGGGCTACTTATAAAATCCCCAAAACTTGTGCTATTTTTAGCAATTAGTTATGGTTTTAAGGCTTTCTACATTTAGTTTCTGCTTGAGAGATTAGACAATCCCTCCCTCTTCCGCCTTAAAATAATGCCTTCTTTATGCTTGGGATTCTTTGTCTTATTTGAAGGGAGAAATTAATGTATATGCTAGTTTGATTTCTATTGCTCACATAGATCTAAAATCTTTTCTACCAGTTTATTTACTATAATATGCTAGTTTTTTGTTCTTACCTGTGGTGGACTCATGAGTCCTTTTCCTTTTCTTCCATTACCAGTCTTCAAATGGCTATATGGTTGCATTTGCTGGTCGGAAATATGCTGCAAGGTCCCCACCAATTTTCGTCGCAGATGAACTACATACCGTAACCAGCTTTACTCTGGTAAGATTATGACATACGAAGTAGGAAGTAAAGACATAAGATATGAACACAATGCAACACTGACTTGGTGATATGCTGCTTGTAAGAATATAACCGGGACATATGCGACAATTCCATCTTTATCACATTCAAAATATTTCTGTAGTTTCTGTCTCACATTGTGACAGCTTCCAATTACTTTTCATAGTGAGGATATGGTGGGATTAGAGGTATTTAACATTTTTGGAGAAAAAAAGTAACTTATTAGTTCTTAGGTTTTGAGTGAAGCTTTTATTTAGTCCTTATGTTACCAAATCAAACATTTTTACCTTTGATCTTTTAATAAGGGTCAATTTTAGTCATTGAGATAAAGAATCGATAGTAACATAATGAAATGCTTTTTACTAGGAAGATGAGTAAACTAACTTTAAACTCCAATAAATTGATGATGGAGTTATTTTGGTCTTGACATGAATTTTATTTTTAAAAGAAAATAAGTAAAAAAGAAAACTACACTTAGAGACCAAAATTGAGCATTATTAAAATGTTAGGGATAAAGTGTTTAATTTTGAAATATGGTGATAGAGTTTAGCTTTATCGCAATGTCCTCTCAATCAATTGAATCAATTCAATATCAGAATACTAATTGTATTGATTAATGGGTAGCATTTCACTCATATAGCTCTTTTCACTCATATAGCTCCTTAAGAGCTAACTAACTAACCCCTAACTAATAAACCTTATCATATGGGGACTAAATTGAAACTTGACCTAAAACGTAGTATCAAGAAAGGTACTTTTCCCAATAGGTTTTCAAAGTAAATCATTATGGGTTGATTTAGTGGTTAAGACAGCCGTAAGGAAGTAATATGTAATGGGTTTAATTCCATGGTGACCACTTTCTTGTGGATTAATTGTTTATCGAACAACCAAATATAGTAAGTCAATCAATTGTTTTGTGAGAATTGTCGAGATGCATCTAAGTTATTCGAGAATCCTAACATATGACAATCCATTGTCCTCTTTATGATGGTGTTCACTTGGATATCACTTCCACCAAATTTTCTCATGTACAGGTGCTTGAGTTTGAGAAGGGCAGGCTGCAAAACTTGTTCTGGAAAAGAGATGGTTGTGCTCAATGCTCAAACAACAATACCTTTGTTTGCATCAACAATCAAGATTGTGCAATCAGATCAAAAGATTGCAGTTATCGTAATGGTCATGTTGATTGCAGTCTTGCAATACAATTAGCATTTTCCGGCACCGATAAACATCTTTCGGTCTTCAACTCTTGGTATGAAGTGTCAAGACTTCGCCAGTACTCGCTCTTCGATCTTTATTCAAACCTCAAAAGTTCTCTCACAAGTCAGTACAACAAGATGCTCTAGTAGATCATATTGTGGTTAATGTATATTTCCATCCTTATATGTTGTAACTCAGTTTGTGCTACGGATTCCTTTCAATTCTTCTACATTTCTAATCAATTAAATGTCAGTATAGGCTGGATTATTGTTTGTTTGGTAGGTTTATTACCAAAGTCATTATATGTATTCTAAACTCCAGGTTATAAGTATTTTTGTATACAAAATCAAAGTTGCTGAGTGAATTATTCTCCATGTTTGCTTTTTGTTGGTTTTGATGAGAAATGAATGACTTGGATTTGGGCTTCCA

mRNA sequence

ATCTGGTCGGCGGAAATTTCCAATTCCAATTCAACCATGGCGATTTCCGATCTCTCACCGGCGTCCGCCGTGCTGCTTCTGTTGTTGACGGCGGCGGTTCTCGAAGCTAGAGACACCAACCGAGCTTTCAACCCTTGCACCGACACGACGGTTCAGAAGTCCGACGGTTTCACCTTGGGGCTTGCCTTCGCGACGGAGCAGATGTTCGTCTTCAACAAGACCTTGAAGTTGTCTCCATGTGACAGCAGGCTTTCTCTTTCGAATGGAAATTCTCTTCTCTCCGTGTTTAGGCCTAAGGTTGATCAGATCTCCCTCCTCACCGTCAATACCTCTACCCGCGTGTCTAACTTGAATCCGTCTTCAAATGGCTATATGGTTGCATTTGCTGGTCGGAAATATGCTGCAAGGTCCCCACCAATTTTCGTCGCAGATGAACTACATACCGTAACCAGCTTTACTCTGGTGCTTGAGTTTGAGAAGGGCAGGCTGCAAAACTTGTTCTGGAAAAGAGATGGTTGTGCTCAATGCTCAAACAACAATACCTTTGTTTGCATCAACAATCAAGATTGTGCAATCAGATCAAAAGATTGCAGTTATCGTAATGGTCATGTTGATTGCAGTCTTGCAATACAATTAGCATTTTCCGGCACCGATAAACATCTTTCGGTCTTCAACTCTTGGTATGAAGTGTCAAGACTTCGCCAGTACTCGCTCTTCGATCTTTATTCAAACCTCAAAAGTTCTCTCACAAGTCAGTACAACAAGATGCTCTAGTAGATCATATTGTGGTTAATGTATATTTCCATCCTTATATGTTGTAACTCAGTTTGTGCTACGGATTCCTTTCAATTCTTCTACATTTCTAATCAATTAAATGTCAGTATAGGCTGGATTATTGTTTGTTTGGTAGGTTTATTACCAAAGTCATTATATGTATTCTAAACTCCAGGTTATAAGTATTTTTGTATACAAAATCAAAGTTGCTGAGTGAATTATTCTCCATGTTTGCTTTTTGTTGGTTTTGATGAGAAATGAATGACTTGGATTTGGGCTTCCA

Coding sequence (CDS)

ATGGCGATTTCCGATCTCTCACCGGCGTCCGCCGTGCTGCTTCTGTTGTTGACGGCGGCGGTTCTCGAAGCTAGAGACACCAACCGAGCTTTCAACCCTTGCACCGACACGACGGTTCAGAAGTCCGACGGTTTCACCTTGGGGCTTGCCTTCGCGACGGAGCAGATGTTCGTCTTCAACAAGACCTTGAAGTTGTCTCCATGTGACAGCAGGCTTTCTCTTTCGAATGGAAATTCTCTTCTCTCCGTGTTTAGGCCTAAGGTTGATCAGATCTCCCTCCTCACCGTCAATACCTCTACCCGCGTGTCTAACTTGAATCCGTCTTCAAATGGCTATATGGTTGCATTTGCTGGTCGGAAATATGCTGCAAGGTCCCCACCAATTTTCGTCGCAGATGAACTACATACCGTAACCAGCTTTACTCTGGTGCTTGAGTTTGAGAAGGGCAGGCTGCAAAACTTGTTCTGGAAAAGAGATGGTTGTGCTCAATGCTCAAACAACAATACCTTTGTTTGCATCAACAATCAAGATTGTGCAATCAGATCAAAAGATTGCAGTTATCGTAATGGTCATGTTGATTGCAGTCTTGCAATACAATTAGCATTTTCCGGCACCGATAAACATCTTTCGGTCTTCAACTCTTGGTATGAAGTGTCAAGACTTCGCCAGTACTCGCTCTTCGATCTTTATTCAAACCTCAAAAGTTCTCTCACAAGTCAGTACAACAAGATGCTCTAG

Protein sequence

MAISDLSPASAVLLLLLTAAVLEARDTNRAFNPCTDTTVQKSDGFTLGLAFATEQMFVFNKTLKLSPCDSRLSLSNGNSLLSVFRPKVDQISLLTVNTSTRVSNLNPSSNGYMVAFAGRKYAARSPPIFVADELHTVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAIRSKDCSYRNGHVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFDLYSNLKSSLTSQYNKML

Homology

[Close]

BLAST of Sed0015994 vs. NCBI nr
Match: XP_023538924.1 (uncharacterized protein LOC111799707 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422.2 bits (1084), Expect = 3.1e-114
Identity = 210/244 (86.07%), Postives = 225/244 (92.21%), Query Frame = 0


Query: 1   MAISDLSPASAVLLLLLTAAVLEARDTNRAFNPCTDTTVQKSDGFTLGLAFATEQMFVFN 60
           MAI DLS ASAVLLLL+TAA +EARD+NR F+PC DTTV+KSDGFTLGLAFAT Q FVFN
Sbjct: 1   MAIYDLSRASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATHQKFVFN 60

Query: 61  KTLKLSPCDSRLSLSNGNSLLSVFRPKVDQISLLTVNTSTRVSNLNPSSNGYMVAFAGRK 120
           KTL LSPCDSRL+L+NGNSL+SVFRP VD+ISLLTVNT+  VSN NPSSNGYMVAFAGRK
Sbjct: 61  KTLNLSPCDSRLALTNGNSLISVFRPMVDEISLLTVNTTPSVSNFNPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADELHTVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180
           YAARSPPIFVADE H VTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI
Sbjct: 121 YAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180

Query: 181 RSKDCSYRNGHVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFDLYSNLKSSLTSQ 240
           R+ +C YR G VDCSLAIQLAFSGTDKHLSVFNSWYEVS+LRQYSLF+LYSNLK SLTSQ
Sbjct: 181 RTSNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSKLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKM 245
           YNK+
Sbjct: 241 YNKI 244

[Close]

BLAST of Sed0015994 vs. NCBI nr
Match: XP_022939140.1 (uncharacterized protein LOC111445105 [Cucurbita moschata])

HSP 1 Score: 421.0 bits (1081), Expect = 7.0e-114
Identity = 209/244 (85.66%), Postives = 225/244 (92.21%), Query Frame = 0


Query: 1   MAISDLSPASAVLLLLLTAAVLEARDTNRAFNPCTDTTVQKSDGFTLGLAFATEQMFVFN 60
           MAI DLS ASAVLLLL+TAA +EARD+NR F+PC DTTV+KSDGFTLGLAFAT+Q FVFN
Sbjct: 1   MAIYDLSTASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFN 60

Query: 61  KTLKLSPCDSRLSLSNGNSLLSVFRPKVDQISLLTVNTSTRVSNLNPSSNGYMVAFAGRK 120
           KTL LSPCDSRL+L+NGNSL+S+FRP VD+ISLLTVNT+  VSN NPSSN YMVAFAGRK
Sbjct: 61  KTLNLSPCDSRLALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSSNSYMVAFAGRK 120

Query: 121 YAARSPPIFVADELHTVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180
           YAARSPPIFVADE H VTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI
Sbjct: 121 YAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180

Query: 181 RSKDCSYRNGHVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFDLYSNLKSSLTSQ 240
           R+ +C YR G VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLF+LYSNLK SLTSQ
Sbjct: 181 RTSNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKM 245
           YNK+
Sbjct: 241 YNKI 244

[Close]

BLAST of Sed0015994 vs. NCBI nr
Match: KAG6596627.1 (hypothetical protein SDJN03_09807, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 419.1 bits (1076), Expect = 2.7e-113
Identity = 208/244 (85.25%), Postives = 224/244 (91.80%), Query Frame = 0


Query: 1   MAISDLSPASAVLLLLLTAAVLEARDTNRAFNPCTDTTVQKSDGFTLGLAFATEQMFVFN 60
           MAI D S ASAVLLLL+TAA +EARD+NR F+PC DTTV+KSDGFTLGLAFAT+Q FVFN
Sbjct: 31  MAIYDFSTASAVLLLLMTAAAVEARDSNRIFSPCADTTVEKSDGFTLGLAFATQQKFVFN 90

Query: 61  KTLKLSPCDSRLSLSNGNSLLSVFRPKVDQISLLTVNTSTRVSNLNPSSNGYMVAFAGRK 120
           KTL LSPCDSRL+L+NGNSL+SVFRP VD+ISLLTVNT+  VSN NPSSN YMVAFAGRK
Sbjct: 91  KTLNLSPCDSRLALTNGNSLISVFRPMVDEISLLTVNTTPSVSNFNPSSNSYMVAFAGRK 150

Query: 121 YAARSPPIFVADELHTVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180
           YAARSPPIFVADE H VTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI
Sbjct: 151 YAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 210

Query: 181 RSKDCSYRNGHVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFDLYSNLKSSLTSQ 240
           R+ +C YR G VDCSLAIQLAFSGTDKHLSVFNSWYEVS+LRQYSLF+LYSNLK SLTSQ
Sbjct: 211 RTSNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSKLRQYSLFNLYSNLKDSLTSQ 270

Query: 241 YNKM 245
           YNK+
Sbjct: 271 YNKI 274

[Close]

BLAST of Sed0015994 vs. NCBI nr
Match: XP_023005908.1 (uncharacterized protein LOC111498771 [Cucurbita maxima])

HSP 1 Score: 413.7 bits (1062), Expect = 1.1e-111
Identity = 206/244 (84.43%), Postives = 223/244 (91.39%), Query Frame = 0


Query: 1   MAISDLSPASAVLLLLLTAAVLEARDTNRAFNPCTDTTVQKSDGFTLGLAFATEQMFVFN 60
           MAI DLS ASAVLLLL+TAA +EARD+NR F+PC DTTV+KSDGFTLGLAFAT+Q FVFN
Sbjct: 1   MAIYDLSTASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFN 60

Query: 61  KTLKLSPCDSRLSLSNGNSLLSVFRPKVDQISLLTVNTSTRVSNLNPSSNGYMVAFAGRK 120
           KTL LSPCDSRL+L+NGNSL+SVFRP VD+ISLLTV+T+  VSN NPSSN YMVAFAGRK
Sbjct: 61  KTLNLSPCDSRLALTNGNSLISVFRPMVDEISLLTVSTTPSVSNFNPSSNSYMVAFAGRK 120

Query: 121 YAARSPPIFVADELHTVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180
           YAARSPPIFVADE H VTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI
Sbjct: 121 YAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180

Query: 181 RSKDCSYRNGHVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFDLYSNLKSSLTSQ 240
           R+ +C YR G VDCSLAIQLAFSGTDKHL VFNSWYEVS+L QYSLF+LYSNLK SLTSQ
Sbjct: 181 RTSNCKYRGGPVDCSLAIQLAFSGTDKHLLVFNSWYEVSKLCQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKM 245
           YNK+
Sbjct: 241 YNKI 244

[Close]

BLAST of Sed0015994 vs. NCBI nr
Match: KAG7028165.1 (hypothetical protein SDJN02_09345 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 411.8 bits (1057), Expect = 4.2e-111
Identity = 209/256 (81.64%), Postives = 225/256 (87.89%), Query Frame = 0


Query: 1   MAISDLSPASAVLLLLLTAAVLEARDTNRAFNPCTDTTVQKSDGFTLGLAFATEQMFVFN 60
           MAI DLS ASAVLLLL+TAA +EARD+NR F+PC DTTV+KSDGFTLGLAFAT+Q FVFN
Sbjct: 31  MAIYDLSTASAVLLLLMTAAAVEARDSNRIFSPCADTTVEKSDGFTLGLAFATQQKFVFN 90

Query: 61  KTLKLSPCDSRLSLSNGNSLLSVFRPKVDQISLLTVNTSTRVSNLNPSSNGYMVAFAGRK 120
           KTL LSPCDSRL+L+NGNSL+SVFRP VD+ISLLTVNT+  VSN NPSSN YMVAFAGRK
Sbjct: 91  KTLNLSPCDSRLALTNGNSLISVFRPMVDEISLLTVNTTPSVSNFNPSSNSYMVAFAGRK 150

Query: 121 YAARSPPIFVADELHTVTSFTL------------VLEFEKGRLQNLFWKRDGCAQCSNNN 180
           YAARSPPIFVADE H VTSFTL            VLEFEKGRLQNLFWKRDGCAQCSNNN
Sbjct: 151 YAARSPPIFVADEQHAVTSFTLNMTSQDSALLAKVLEFEKGRLQNLFWKRDGCAQCSNNN 210

Query: 181 TFVCINNQDCAIRSKDCSYRNGHVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFD 240
           TFVCINNQDCAIR+ +C YR G VDCSLAIQLAFSGTDKHLSVFNSWYEVS+LRQYSLF+
Sbjct: 211 TFVCINNQDCAIRTSNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSKLRQYSLFN 270

Query: 241 LYSNLKSSLTSQYNKM 245
           LYSNLK SLTSQYNK+
Sbjct: 271 LYSNLKDSLTSQYNKI 286

[Close]

BLAST of Sed0015994 vs. ExPASy TrEMBL
Match: A0A6J1FLU2 (uncharacterized protein LOC111445105 OS=Cucurbita moschata OX=3662 GN=LOC111445105 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.4e-114
Identity = 209/244 (85.66%), Postives = 225/244 (92.21%), Query Frame = 0


Query: 1   MAISDLSPASAVLLLLLTAAVLEARDTNRAFNPCTDTTVQKSDGFTLGLAFATEQMFVFN 60
           MAI DLS ASAVLLLL+TAA +EARD+NR F+PC DTTV+KSDGFTLGLAFAT+Q FVFN
Sbjct: 1   MAIYDLSTASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFN 60

Query: 61  KTLKLSPCDSRLSLSNGNSLLSVFRPKVDQISLLTVNTSTRVSNLNPSSNGYMVAFAGRK 120
           KTL LSPCDSRL+L+NGNSL+S+FRP VD+ISLLTVNT+  VSN NPSSN YMVAFAGRK
Sbjct: 61  KTLNLSPCDSRLALTNGNSLISMFRPMVDEISLLTVNTTPSVSNFNPSSNSYMVAFAGRK 120

Query: 121 YAARSPPIFVADELHTVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180
           YAARSPPIFVADE H VTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI
Sbjct: 121 YAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180

Query: 181 RSKDCSYRNGHVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFDLYSNLKSSLTSQ 240
           R+ +C YR G VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLF+LYSNLK SLTSQ
Sbjct: 181 RTSNCKYRGGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKM 245
           YNK+
Sbjct: 241 YNKI 244

[Close]

BLAST of Sed0015994 vs. ExPASy TrEMBL
Match: A0A6J1L3G6 (uncharacterized protein LOC111498771 OS=Cucurbita maxima OX=3661 GN=LOC111498771 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 5.4e-112
Identity = 206/244 (84.43%), Postives = 223/244 (91.39%), Query Frame = 0


Query: 1   MAISDLSPASAVLLLLLTAAVLEARDTNRAFNPCTDTTVQKSDGFTLGLAFATEQMFVFN 60
           MAI DLS ASAVLLLL+TAA +EARD+NR F+PC DTTV+KSDGFTLGLAFAT+Q FVFN
Sbjct: 1   MAIYDLSTASAVLLLLMTAAAVEARDSNRVFSPCADTTVEKSDGFTLGLAFATQQKFVFN 60

Query: 61  KTLKLSPCDSRLSLSNGNSLLSVFRPKVDQISLLTVNTSTRVSNLNPSSNGYMVAFAGRK 120
           KTL LSPCDSRL+L+NGNSL+SVFRP VD+ISLLTV+T+  VSN NPSSN YMVAFAGRK
Sbjct: 61  KTLNLSPCDSRLALTNGNSLISVFRPMVDEISLLTVSTTPSVSNFNPSSNSYMVAFAGRK 120

Query: 121 YAARSPPIFVADELHTVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180
           YAARSPPIFVADE H VTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI
Sbjct: 121 YAARSPPIFVADEQHAVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180

Query: 181 RSKDCSYRNGHVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFDLYSNLKSSLTSQ 240
           R+ +C YR G VDCSLAIQLAFSGTDKHL VFNSWYEVS+L QYSLF+LYSNLK SLTSQ
Sbjct: 181 RTSNCKYRGGPVDCSLAIQLAFSGTDKHLLVFNSWYEVSKLCQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKM 245
           YNK+
Sbjct: 241 YNKI 244

[Close]

BLAST of Sed0015994 vs. ExPASy TrEMBL
Match: A0A6J1J6R6 (uncharacterized protein LOC111481736 OS=Cucurbita maxima OX=3661 GN=LOC111481736 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 3.0e-110
Identity = 205/244 (84.02%), Postives = 223/244 (91.39%), Query Frame = 0


Query: 1   MAISDLSPASAVLLLLLTAAVLEARDTNRAFNPCTDTTVQKSDGFTLGLAFATEQMFVFN 60
           MAISDLSP S VLLLL+TA V+EARD NR F+PC DTTV+KSDGFTLGLAFATEQ FVFN
Sbjct: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60

Query: 61  KTLKLSPCDSRLSLSNGNSLLSVFRPKVDQISLLTVNTSTRVSNLNPSSNGYMVAFAGRK 120
           KTLKLSPCDSRL+L+NGN+L+SVFRPKVD+ISLLTVNT+  VS  NPSSNGYMVAFAGRK
Sbjct: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSTFNPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADELHTVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180
           YAARSPPIFV+D  H VTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCINNQDCAI
Sbjct: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180

Query: 181 RSKDCSYRNGHVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFDLYSNLKSSLTSQ 240
           R+ +C   +G VDCSLAIQLAFSGTDKHLSVFNSWYEVS+LRQYSL DLYSNLK SLTSQ
Sbjct: 181 RTNNCK-NSGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSKLRQYSLVDLYSNLKDSLTSQ 240

Query: 241 YNKM 245
           YNK+
Sbjct: 241 YNKI 243

[Close]

BLAST of Sed0015994 vs. ExPASy TrEMBL
Match: A0A6J1F5Z3 (uncharacterized protein LOC111442414 OS=Cucurbita moschata OX=3662 GN=LOC111442414 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.9e-110
Identity = 205/244 (84.02%), Postives = 224/244 (91.80%), Query Frame = 0


Query: 1   MAISDLSPASAVLLLLLTAAVLEARDTNRAFNPCTDTTVQKSDGFTLGLAFATEQMFVFN 60
           MAISDLSP S VLLLL+TA V+EARD NR F+PC DTTV+KSDGFTLGLAFATEQ FVFN
Sbjct: 1   MAISDLSPLSFVLLLLVTAVVVEARDNNRVFSPCIDTTVEKSDGFTLGLAFATEQKFVFN 60

Query: 61  KTLKLSPCDSRLSLSNGNSLLSVFRPKVDQISLLTVNTSTRVSNLNPSSNGYMVAFAGRK 120
           KTLKLSPCDSRL+L+NGN+L+SVFRPKVD+ISLLTVNT+  VS+ NPSS+GYMVAFAGRK
Sbjct: 61  KTLKLSPCDSRLALTNGNALISVFRPKVDEISLLTVNTTPSVSSFNPSSHGYMVAFAGRK 120

Query: 121 YAARSPPIFVADELHTVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180
           YAARSPPIFV+D  H VTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCINNQDCAI
Sbjct: 121 YAARSPPIFVSDGQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNHTFVCINNQDCAI 180

Query: 181 RSKDCSYRNGHVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFDLYSNLKSSLTSQ 240
           R+ +C   +G VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSL DLYSNLK SLTSQ
Sbjct: 181 RTNNCK-NSGPVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLVDLYSNLKDSLTSQ 240

Query: 241 YNKM 245
           YNK+
Sbjct: 241 YNKI 243

[Close]

BLAST of Sed0015994 vs. ExPASy TrEMBL
Match: A0A0A0LGU1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782730 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.1e-109
Identity = 201/244 (82.38%), Postives = 220/244 (90.16%), Query Frame = 0


Query: 1   MAISDLSPASAVLLLLLTAAVLEARDTNRAFNPCTDTTVQKSDGFTLGLAFATEQMFVFN 60
           MAIS LSPAS VL+LL+TA V+EA D NR F+PCTDTTV+ SDGFTLG AFATEQ F FN
Sbjct: 1   MAISYLSPASGVLILLVTAVVIEASDNNRVFSPCTDTTVENSDGFTLGFAFATEQKFFFN 60

Query: 61  KTLKLSPCDSRLSLSNGNSLLSVFRPKVDQISLLTVNTSTRVSNLNPSSNGYMVAFAGRK 120
           KTL+LSPCDSRL L+NGNSL+SVFRPKVD+ISLLT+NTS  VS+ +PSSNGYMVAFAGRK
Sbjct: 61  KTLQLSPCDSRLGLTNGNSLISVFRPKVDEISLLTINTSRSVSSFDPSSNGYMVAFAGRK 120

Query: 121 YAARSPPIFVADELHTVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAI 180
           YAARSPPIFVAD+ H VTSFTLVLEFEKGRLQNLFWKRDGCA+CSNN+TFVCI+NQDCAI
Sbjct: 121 YAARSPPIFVADQQHIVTSFTLVLEFEKGRLQNLFWKRDGCARCSNNSTFVCIHNQDCAI 180

Query: 181 RSKDCSYRNGHVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFDLYSNLKSSLTSQ 240
           R+  C    G VDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLF+LYSNLK SLTSQ
Sbjct: 181 RTNSCKNNGGSVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFNLYSNLKDSLTSQ 240

Query: 241 YNKM 245
           YNK+
Sbjct: 241 YNKI 244

[Close]

BLAST of Sed0015994 vs. TAIR 10
Match: AT3G44150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11800.1); Has 76 Blast hits to 75 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 289.7 bits (740), Expect = 2.3e-78
Identity = 146/244 (59.84%), Postives = 181/244 (74.18%), Query Frame = 0


Query: 9   ASAVLLLLLTAAVL----------EARDTNRAFNPCTDTTVQKSDGFTLGLAFATEQMFV 68
           +S  L LL+ +AV+           + +TN  ++PC+DT +Q+SDGFT G+AF++   F 
Sbjct: 3   SSKTLTLLVFSAVILTVALGGDSGGSGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFF 62

Query: 69  FNKTLKLSPCDSRLSLSNGNSLLSVFRPKVDQISLLTVNTSTRVSNLNPSSNGYMVAFAG 128
            N+T+ LSPCD RLSL+  NS  SVFRPK+D+ISLL++NTS    +   +  GYMVAFAG
Sbjct: 63  INQTVLLSPCDRRLSLAAMNSQFSVFRPKIDEISLLSINTSAFFPD---NYGGYMVAFAG 122

Query: 129 RKYAARSPPIFVADELHTVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDC 188
           RKYAARS P F+A+    VTSFTLV+EF+KGRLQNL+WKRDGCA C  N  FVC+N QDC
Sbjct: 123 RKYAARSIPAFIANSTFIVTSFTLVMEFQKGRLQNLYWKRDGCASCKGNQNFVCLNKQDC 182

Query: 189 AIRSKDCSYRNGHVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFDLYSNLKSSLT 243
           AIR+  C  R G VDCSL IQLAFSGTDKHL+V NSWYEV  L+QYSL+ LYSNLKSSLT
Sbjct: 183 AIRTPSCKGRGGAVDCSLGIQLAFSGTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLT 242

[Close]

BLAST of Sed0015994 vs. TAIR 10
Match: AT3G11800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 278.9 bits (712), Expect = 4.0e-75
Identity = 134/232 (57.76%), Postives = 178/232 (76.72%), Query Frame = 0


Query: 16  LLTAAVLEARDTNRAFNPCTDTTVQKSDGFTLGLAFATEQMFVF---NKTLKLSPCDSRL 75
           +LT+++ EA D N+ ++PC+D+TV   DGFT G+AFA +  F     +K+++ SPCD R 
Sbjct: 14  VLTSSLTEAGDNNQVYSPCSDSTVAIGDGFTFGIAFAAKDSFFSTNRSKSVQYSPCDHRH 73

Query: 76  SLSNGNSLLSVFRPKVDQISLLTVNTSTRVSNLNPSSNGYMVAFAGRKYAARSPPIFVAD 135
              NGNS ++VFRPKVD+I+LLT+NTS+  S    +S GYMVAFAG KYAARS PI VAD
Sbjct: 74  LSLNGNSEVAVFRPKVDEITLLTINTSSSSSFRPDASKGYMVAFAGAKYAARSLPIMVAD 133

Query: 136 ELHTVTSFTLVLEFEKGRLQNLFWKRDGCAQCSNNNTFVCINNQDCAIRSKDCSYRNGHV 195
             H VTSFTLVLEF+KGRL+N+FWK+DGC++CS ++ FVC+N ++CAI+ ++C  + G V
Sbjct: 134 SNHIVTSFTLVLEFQKGRLENMFWKKDGCSKCSGDSKFVCLNKEECAIKPQNCKNQGGQV 193

Query: 196 DCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFDLYSNLKSSLTSQYNKM 245
           DCSL IQLAFSGTDKH +  NSWYEV+ L+QYSL+ LYSNLK SLT+ +  +
Sbjct: 194 DCSLGIQLAFSGTDKHYTALNSWYEVANLKQYSLYGLYSNLKDSLTNPFKNI 245

[Close]

BLAST of Sed0015994 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein )

HSP 1 Score: 215.7 bits (548), Expect = 4.2e-56
Identity = 112/239 (46.86%), Postives = 164/239 (68.62%), Query Frame = 0


Query: 12  VLLLLLTAAVLEARDTNRAFNPCTDTTVQKSDGFTLGLAFATEQMFVFNKTLKLSPCDSR 71
           ++++++    + A D N  ++PC+DT + K DGFT+G+A ++++ F F   ++LSPCD+R
Sbjct: 130 MMIVMMVDDWVGAADNNPVYSPCSDTQISKGDGFTIGIAISSKEAF-FLDQVQLSPCDTR 189

Query: 72  LSLSNGNSLLSVFRPKVDQISLLTVNTSTRVSNLNPS-SNGYMVAFAGRKYAARSPPIFV 131
           L L+   + L++FRPKVD+ISLL+++T    S  NPS + G+MV FAG KYAARS P+ V
Sbjct: 190 LGLAAKMAQLALFRPKVDEISLLSIDT----SKFNPSEAGGFMVGFAGSKYAARSYPVKV 249

Query: 132 ADELHTVTSFT---------LVLEFEKGRLQNLFWKRDGCAQC--SNNNTFVCINNQDCA 191
           AD  +T+T+FT         LVLEF+KG LQNLFWK  GC  C  + +++ VC+N  DCA
Sbjct: 250 ADGSNTITAFTLVMKLTLSPLVLEFQKGVLQNLFWKSFGCDLCKGTGSSSSVCLNGTDCA 309

Query: 192 IRSKDCSYRNGHVDCSLAIQLAFSGTDKHLSVFNSWYEVSRLRQYSLFDLYSNLKSSLT 239
           + +  C    G  +C++ IQ+AFSGTD++L   N+WYEV+ LRQYSL DLY+N   SL+
Sbjct: 310 VPTSKCKANGGQANCNIGIQVAFSGTDRNLESLNTWYEVNNLRQYSLTDLYANAVDSLS 363

[Close]

BLAST of Sed0015994 vs. TAIR 10
Match: AT3G48630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44150.1); Has 64 Blast hits to 64 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 1.7e-09
Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 112 YMVAFAGRKYAARSPPIFVADELHTVTSFTLVLEFEKGRLQNLFWKRDGCAQ 164
           Y V   G +  +   P F+A+    VTSFT V+EF+KGRLQNL+WKRD CA+
Sbjct: 2   YNVGTRGSEIRSEVDPAFIANSTFIVTSFTWVMEFQKGRLQNLYWKRDVCAK 53

The following BLAST results are available for this feature:

BLAST of Sed0015994 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023538924.1	3.1e-114	86.07	uncharacterized protein LOC111799707 [Cucurbita pepo subsp. pepo]	[more]
XP_022939140.1	7.0e-114	85.66	uncharacterized protein LOC111445105 [Cucurbita moschata]	[more]
KAG6596627.1	2.7e-113	85.25	hypothetical protein SDJN03_09807, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023005908.1	1.1e-111	84.43	uncharacterized protein LOC111498771 [Cucurbita maxima]	[more]
KAG7028165.1	4.2e-111	81.64	hypothetical protein SDJN02_09345 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Sed0015994 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0015994 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FLU2	3.4e-114	85.66	uncharacterized protein LOC111445105 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1L3G6	5.4e-112	84.43	uncharacterized protein LOC111498771 OS=Cucurbita maxima OX=3661 GN=LOC111498771...	[more]
A0A6J1J6R6	3.0e-110	84.02	uncharacterized protein LOC111481736 OS=Cucurbita maxima OX=3661 GN=LOC111481736...	[more]
A0A6J1F5Z3	3.9e-110	84.02	uncharacterized protein LOC111442414 OS=Cucurbita moschata OX=3662 GN=LOC1114424...	[more]
A0A0A0LGU1	1.1e-109	82.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782730 PE=4 SV=1	[more]

BLAST of Sed0015994 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44150.1	2.3e-78	59.84	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11800.1	4.0e-75	57.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15910.1	4.2e-56	46.86	CSL zinc finger domain-containing protein	[more]
AT3G48630.1	1.7e-09	51.92	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044248	Diphthamide biosynthesis protein 3/4-like	PANTHER	PTHR21454	DPH3 HOMOLOG-RELATED	coord: 1..244
None	No IPR available	PANTHER	PTHR21454:SF33	SUBFAMILY NOT NAMED	coord: 1..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015994.1	Sed0015994.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017183	peptidyl-diphthamide biosynthetic process from peptidyl-histidine
biological_process	GO:0002098	tRNA wobble uridine modification
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding