Sed0015734 (gene) Chayote v1

Overview


Name	Sed0015734
Type	gene
Organism	Sechium edule (Chayote v1)
Description	Amino-acid racemase isoform 2
Location	LG12: 33839418 .. 33841002 (-)
RNA-Seq Expression	Sed0015734
Synteny	Sed0015734

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATGTCTTTTTATGCACTGAATTGCCCTGTACCTGTTCGACGAAATGCATGTGAGAGTGTTACTTGTTTTAGAAGGAGTTTTGTACAGATTTGTTCTATTGTTCGTACTGATGAGAATGATAACTTACCAGGATCCAAGAAGATACCGAGTTCTGGGAAATCTGTGTCAAAATGTCAAATTCATAAGCCCCTTCTTGTGCAGCCAAACACTGTGGGTGTTATAGGGGGAGTTTCGGTTATTTCGACTTTATTGTTCTTGGAAAAGCTTGTGTGGTGGAGTTTGAAGAATGGACAGGAGAGCATACCTTTTGTTGTTTGCAGTGATCCAGGATTAGGGAAAGGGATTGCTTCTCTTGCTTCATTGAGTACATTCAGCACAAGTTCTTCTCCACATGGTCATGATGAAGCTCCTATCGTTGAGAATTTGAAGCGGAAAAGGGCGTTTCTCGAGCAGTCTGGAGCTCGGTGCTTGATTACCCCTTGCCATCTTTCACATGGGTGGCTTGGTGACACAGCTGAGAGTTGCAAATTGCCTTTCCTTCATGTGGGAGATTGTGTTACAATAGAGCTTAAAGAGGCTAAGCTTAAGCCACTTGAAGCTGGGAGCAATGTCCGGATTGGGCTGCTTAGTACTGACACAGCAGCAGTGGCTGGTTTTTACCATGAGAGGCTACAAAACCAGGTTTAGTAAATAAATTCTCAGCTCATGCTAGGTCCTTTAGTTTACTTGATAAAGAGTGATGCCCAAAGCAACAAGAACACCAGTACATAACATTATCTTTGCTTTATGCCATCTCTAAATCATCGTGAAGTGACTTAGCAATAAAAAAGATTTTAAGGATCTAAAAGGTGATGGATTCAGTTGATATTGCTATCTATCTCGTAATTAATTACATAAACATTATATATGTCTTATGCCATCTCTAAACCATCATGGAGTGGTCTAGTAGTTAAAAACCTTGGGGATCTAAGAGGTGAATGGATTCAGTCTACAGTACGACCTATCTTTTTATATATATATATAATTATTTATGGATTTTTTTAATATCTAAATGTTGTAGTGTCAAACAATATGTCTCGTGAGAATAATTGATGCGTGCGTAAGCTGATAGGGATCCTCATAAATATTTTTTTTTAAAAATGCCATCTCTGGGTATGCAAAGATATGGGGAATCTTGCCATGCCTCATAATTGAAATGGATGTTATTGAAGCGATTGAGGGGAATTTTTCTACACTTCATAGTAAAAAAGTCCTAAATTATCTTCTGAATTTCTTTTTCTTTCTTCAGGGCTTCGATGTTGTGTTGCCAGACGAAGCAACCATGAAGAATATAATAGTTCCTGCAGTTGAAGCTTTGAACAAAAGGGATCATGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTCCATATTCTTTTGATAAGGGGTGTGAATATGGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTCCCCCTGATGATCCCATTTTGAAAAAATGTATTGACCCCATGGATGCCTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGGAATTTTACATGAGAAAGCTTAG

mRNA sequence

ATGGCTATGTCTTTTTATGCACTGAATTGCCCTGTACCTGTTCGACGAAATGCATGTGAGAGTGTTACTTGTTTTAGAAGGAGTTTTGTACAGATTTGTTCTATTGTTCGTACTGATGAGAATGATAACTTACCAGGATCCAAGAAGATACCGAGTTCTGGGAAATCTGTGTCAAAATGTCAAATTCATAAGCCCCTTCTTGTGCAGCCAAACACTGTGGGTGTTATAGGGGGAGTTTCGGTTATTTCGACTTTATTGTTCTTGGAAAAGCTTGTGTGGTGGAGTTTGAAGAATGGACAGGAGAGCATACCTTTTGTTGTTTGCAGTGATCCAGGATTAGGGAAAGGGATTGCTTCTCTTGCTTCATTGAGTACATTCAGCACAAGTTCTTCTCCACATGGTCATGATGAAGCTCCTATCGTTGAGAATTTGAAGCGGAAAAGGGCGTTTCTCGAGCAGTCTGGAGCTCGGTGCTTGATTACCCCTTGCCATCTTTCACATGGGTGGCTTGGTGACACAGCTGAGAGTTGCAAATTGCCTTTCCTTCATGTGGGAGATTGTGTTACAATAGAGCTTAAAGAGGCTAAGCTTAAGCCACTTGAAGCTGGGAGCAATGTCCGGATTGGGCTGCTTAGTACTGACACAGCAGCAGTGGCTGGTTTTTACCATGAGAGGCTACAAAACCAGGGCTTCGATGTTGTGTTGCCAGACGAAGCAACCATGAAGAATATAATAGTTCCTGCAGTTGAAGCTTTGAACAAAAGGGATCATGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTCCATATTCTTTTGATAAGGGGTGTGAATATGGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTCCCCCTGATGATCCCATTTTGAAAAAATGTATTGACCCCATGGATGCCTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGGAATTTTACATGAGAAAGCTTAG

Coding sequence (CDS)

ATGGCTATGTCTTTTTATGCACTGAATTGCCCTGTACCTGTTCGACGAAATGCATGTGAGAGTGTTACTTGTTTTAGAAGGAGTTTTGTACAGATTTGTTCTATTGTTCGTACTGATGAGAATGATAACTTACCAGGATCCAAGAAGATACCGAGTTCTGGGAAATCTGTGTCAAAATGTCAAATTCATAAGCCCCTTCTTGTGCAGCCAAACACTGTGGGTGTTATAGGGGGAGTTTCGGTTATTTCGACTTTATTGTTCTTGGAAAAGCTTGTGTGGTGGAGTTTGAAGAATGGACAGGAGAGCATACCTTTTGTTGTTTGCAGTGATCCAGGATTAGGGAAAGGGATTGCTTCTCTTGCTTCATTGAGTACATTCAGCACAAGTTCTTCTCCACATGGTCATGATGAAGCTCCTATCGTTGAGAATTTGAAGCGGAAAAGGGCGTTTCTCGAGCAGTCTGGAGCTCGGTGCTTGATTACCCCTTGCCATCTTTCACATGGGTGGCTTGGTGACACAGCTGAGAGTTGCAAATTGCCTTTCCTTCATGTGGGAGATTGTGTTACAATAGAGCTTAAAGAGGCTAAGCTTAAGCCACTTGAAGCTGGGAGCAATGTCCGGATTGGGCTGCTTAGTACTGACACAGCAGCAGTGGCTGGTTTTTACCATGAGAGGCTACAAAACCAGGGCTTCGATGTTGTGTTGCCAGACGAAGCAACCATGAAGAATATAATAGTTCCTGCAGTTGAAGCTTTGAACAAAAGGGATCATGAAGGAGCAAGAAATCTGTTGAGAATTGCTGTCCATATTCTTTTGATAAGGGGTGTGAATATGGTAATACTTGCTTCTGATGAATTGCTTAATCTTCTTCCCCCTGATGATCCCATTTTGAAAAAATGTATTGACCCCATGGATGCCTTGGCCAGAGCAGCCATTAAATGGTCTAGATCTACAGGAATTTTACATGAGAAAGCTTAG

Protein sequence

MAMSFYALNCPVPVRRNACESVTCFRRSFVQICSIVRTDENDNLPGSKKIPSSGKSVSKCQIHKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKNGQESIPFVVCSDPGLGKGIASLASLSTFSTSSSPHGHDEAPIVENLKRKRAFLEQSGARCLITPCHLSHGWLGDTAESCKLPFLHVGDCVTIELKEAKLKPLEAGSNVRIGLLSTDTAAVAGFYHERLQNQGFDVVLPDEATMKNIIVPAVEALNKRDHEGARNLLRIAVHILLIRGVNMVILASDELLNLLPPDDPILKKCIDPMDALARAAIKWSRSTGILHEKA

Homology

[Close]

BLAST of Sed0015734 vs. NCBI nr
Match: XP_038878952.1 (uncharacterized protein LOC120071036 [Benincasa hispida])

HSP 1 Score: 539.3 bits (1388), Expect = 2.3e-149
Identity = 267/330 (80.91%), Postives = 291/330 (88.18%), Query Frame = 0


Query: 1   MAMSFYALNCPVPVRRNACESVTCFRR-----SFVQICSIVRTDENDNLPGSKKIPSSGK 60
           M  SFYAL CP P+RRNA E +T FRR     S VQI S+++TD NDNLPGSKKI SSGK
Sbjct: 6   MTTSFYALTCPAPIRRNANEGITRFRRRINPYSSVQISSVIQTDANDNLPGSKKISSSGK 65

Query: 61  SVSKCQIHKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKNGQESIPFVVCSDPGLGK 120
           S+SK +  KPLLVQP TVGVIGGVSV STLLFLEKLVWWS+K+GQESIPFVVCSDP LGK
Sbjct: 66  SLSKTRTPKPLLVQPKTVGVIGGVSVFSTLLFLEKLVWWSMKDGQESIPFVVCSDPALGK 125

Query: 121 GIASLASLSTFSTSSSPHGHDEAPIVENLKRKRAFLEQSGARCLITPCHLSHGWLGDTAE 180
           GI  L S  TFST+SS +GH + PI+ENLKRKRAFLEQSGARCLITPCHL+H WLGDT+E
Sbjct: 126 GIPPLTSSCTFSTNSSQYGHSDDPIIENLKRKRAFLEQSGARCLITPCHLTHRWLGDTSE 185

Query: 181 SCKLPFLHVGDCVTIELKEAKLKPLEAGSNVRIGLLSTDTAAVAGFYHERLQNQGFDVVL 240
           SCKLPFLHVGDCV  ELKEAKLKPLE GS+VRIGLL+TDTA VAGFYHERLQNQGFD++L
Sbjct: 186 SCKLPFLHVGDCVARELKEAKLKPLEGGSSVRIGLLATDTATVAGFYHERLQNQGFDILL 245

Query: 241 PDEATMKNIIVPAVEALNKRDHEGARNLLRIAVHILLIRGVNMVILASDELLNLLPPDDP 300
           PDEATM++I++PAVEALNKRD EGARNLLRIAVH+LLIR VNMVILASDELLNLLPPDDP
Sbjct: 246 PDEATMEHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLLPPDDP 305

Query: 301 ILKKCIDPMDALARAAIKWSRSTGILHEKA 326
           ILKKCIDPMDALARAAIKWSRST  LHEKA
Sbjct: 306 ILKKCIDPMDALARAAIKWSRSTENLHEKA 335

[Close]

BLAST of Sed0015734 vs. NCBI nr
Match: XP_023006388.1 (uncharacterized protein LOC111499133 isoform X1 [Cucurbita maxima])

HSP 1 Score: 526.9 bits (1356), Expect = 1.2e-145
Identity = 269/330 (81.52%), Postives = 291/330 (88.18%), Query Frame = 0


Query: 1   MAMSFYALNCPVPVRRNACESVTCFRR-----SFVQICSIVRTDENDNLPGSKKIPSSGK 60
           MAM FYALNCP PVRRNA ES+T FRR     S +QI S+V+TDENDNLP SKKI S+GK
Sbjct: 6   MAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKISSAGK 65

Query: 61  SVSKCQIHKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKNGQESIPFVVCSDPGLGK 120
           SVSK +  KPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLK+GQ+SIPFVVCSDP LGK
Sbjct: 66  SVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSDPALGK 125

Query: 121 GIASLASLSTFSTSSSPHGHDEAPIVENLKRKRAFLEQSGARCLITPCHLSHGWLGDTAE 180
           GI  L SL+TF+ +SS H   +API+E LK+K  FLEQSGARCLITPCHLSH WLGDT  
Sbjct: 126 GIPPLTSLTTFTANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWLGDT-- 185

Query: 181 SCKLPFLHVGDCVTIELKEAKLKPLEAGSNVRIGLLSTDTAAVAGFYHERLQNQGFDVVL 240
           SCKLPFLHVGDCV +ELKEAKLKPLEAGS+VRIGLL+TD A V GFY ERLQNQGF+VVL
Sbjct: 186 SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQGFEVVL 245

Query: 241 PDEATMKNIIVPAVEALNKRDHEGARNLLRIAVHILLIRGVNMVILASDELLNLLPPDDP 300
           PDEAT+K+I+VPAVEALNKRD EGARNLLRIAVHILLIR VN+VILASDELLNLLPPDDP
Sbjct: 246 PDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLLPPDDP 305

Query: 301 ILKKCIDPMDALARAAIKWSRSTGILHEKA 326
           ILKKCIDPMDALARAAIKWSRSTG LHEKA
Sbjct: 306 ILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of Sed0015734 vs. NCBI nr
Match: XP_023530993.1 (uncharacterized protein LOC111793383 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 524.2 bits (1349), Expect = 7.8e-145
Identity = 268/330 (81.21%), Postives = 289/330 (87.58%), Query Frame = 0


Query: 1   MAMSFYALNCPVPVRRNACESVTCFRR-----SFVQICSIVRTDENDNLPGSKKIPSSGK 60
           MAM FYALNCP PVRRNA ES+T FRR     S +QI S+V+TDENDNLP SKKI + GK
Sbjct: 7   MAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKISTPGK 66

Query: 61  SVSKCQIHKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKNGQESIPFVVCSDPGLGK 120
           SVSK +  KPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLK+GQ+SIPFVVCSDP LGK
Sbjct: 67  SVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSDPALGK 126

Query: 121 GIASLASLSTFSTSSSPHGHDEAPIVENLKRKRAFLEQSGARCLITPCHLSHGWLGDTAE 180
           GI  L SL+TF  +SS H   +API+E LK+K  FLEQSGARCLITPCHLSH WLGDT  
Sbjct: 127 GIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWLGDT-- 186

Query: 181 SCKLPFLHVGDCVTIELKEAKLKPLEAGSNVRIGLLSTDTAAVAGFYHERLQNQGFDVVL 240
           SCKLPFLHVGDCV +ELKEAKLKPLEAGS+VRIGLL+TD A V GFY ERLQNQGF+VVL
Sbjct: 187 SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQGFEVVL 246

Query: 241 PDEATMKNIIVPAVEALNKRDHEGARNLLRIAVHILLIRGVNMVILASDELLNLLPPDDP 300
           PDEAT+K+I+VPAVEALNKRD EGARNLLRIAVHILLIR VN+VILASDELLNLLPPDDP
Sbjct: 247 PDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLLPPDDP 306

Query: 301 ILKKCIDPMDALARAAIKWSRSTGILHEKA 326
           ILKKCIDPMDALARAAIKWSRSTG LHEKA
Sbjct: 307 ILKKCIDPMDALARAAIKWSRSTGNLHEKA 334

[Close]

BLAST of Sed0015734 vs. NCBI nr
Match: XP_022931647.1 (uncharacterized protein LOC111437803 isoform X1 [Cucurbita moschata])

HSP 1 Score: 521.9 bits (1343), Expect = 3.9e-144
Identity = 267/330 (80.91%), Postives = 288/330 (87.27%), Query Frame = 0


Query: 1   MAMSFYALNCPVPVRRNACESVTCFRR-----SFVQICSIVRTDENDNLPGSKKIPSSGK 60
           MAM FYALNCP PVRRNA ES+T FRR     S +QI S+V+TDENDNLP SKKI + GK
Sbjct: 6   MAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKISTPGK 65

Query: 61  SVSKCQIHKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKNGQESIPFVVCSDPGLGK 120
           SVSK +  KPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLK+GQ+SIPFVVCSDP LGK
Sbjct: 66  SVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSDPALGK 125

Query: 121 GIASLASLSTFSTSSSPHGHDEAPIVENLKRKRAFLEQSGARCLITPCHLSHGWLGDTAE 180
           GI  L SL+TF  +SS H   +API+E LK+K  FLEQSGARCLITPCHLSH WL DT  
Sbjct: 126 GIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWLSDT-- 185

Query: 181 SCKLPFLHVGDCVTIELKEAKLKPLEAGSNVRIGLLSTDTAAVAGFYHERLQNQGFDVVL 240
           SCKLPFLHVGDCV +ELKEAKLKPLEAGS+VRIGLL+TD A V GFY ERLQNQGF+VVL
Sbjct: 186 SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQGFEVVL 245

Query: 241 PDEATMKNIIVPAVEALNKRDHEGARNLLRIAVHILLIRGVNMVILASDELLNLLPPDDP 300
           PDEAT+K+I+VPAVEALNKRD EGARNLLRIAVHILLIR VN+VILASDELLNLLPPDDP
Sbjct: 246 PDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLLPPDDP 305

Query: 301 ILKKCIDPMDALARAAIKWSRSTGILHEKA 326
           ILKKCIDPMDALARAAIKWSRSTG LHEKA
Sbjct: 306 ILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of Sed0015734 vs. NCBI nr
Match: KAG6587918.1 (hypothetical protein SDJN03_16483, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 520.4 bits (1339), Expect = 1.1e-143
Identity = 265/330 (80.30%), Postives = 289/330 (87.58%), Query Frame = 0


Query: 1   MAMSFYALNCPVPVRRNACESVTCFRR-----SFVQICSIVRTDENDNLPGSKKIPSSGK 60
           MA+ FYALNCP PVRRNA ES+T FRR     S +QI S+V+TDENDNLP SKKI + GK
Sbjct: 6   MAVPFYALNCPAPVRRNANESITSFRRRLNPYSSLQIFSVVQTDENDNLPVSKKISTPGK 65

Query: 61  SVSKCQIHKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKNGQESIPFVVCSDPGLGK 120
           SVSK +  KPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLK+GQ+SIPFVVCSDP LGK
Sbjct: 66  SVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSDPALGK 125

Query: 121 GIASLASLSTFSTSSSPHGHDEAPIVENLKRKRAFLEQSGARCLITPCHLSHGWLGDTAE 180
           GI  L SL+TF+ +SS H   +API+E LK+K  FLEQSGARCLITPCHLSH WLGDT  
Sbjct: 126 GIPPLTSLTTFTENSSQHAQIDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWLGDT-- 185

Query: 181 SCKLPFLHVGDCVTIELKEAKLKPLEAGSNVRIGLLSTDTAAVAGFYHERLQNQGFDVVL 240
           SCKLPFLHVGDCV +ELKEAKLKPLEAGS+VRIGLL+TD A V GFY ERLQNQGF+VVL
Sbjct: 186 SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQGFEVVL 245

Query: 241 PDEATMKNIIVPAVEALNKRDHEGARNLLRIAVHILLIRGVNMVILASDELLNLLPPDDP 300
           PD+AT+K+I+VPAVEALNKRD EGARNLLRIAVHILLIR VN+VILASDE LNLLPPDDP
Sbjct: 246 PDDATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDEFLNLLPPDDP 305

Query: 301 ILKKCIDPMDALARAAIKWSRSTGILHEKA 326
           ILKKCIDPMDALARAAIKWSRSTG LHEKA
Sbjct: 306 ILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of Sed0015734 vs. ExPASy TrEMBL
Match: A0A6J1L4S4 (uncharacterized protein LOC111499133 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499133 PE=4 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 5.8e-146
Identity = 269/330 (81.52%), Postives = 291/330 (88.18%), Query Frame = 0


Query: 1   MAMSFYALNCPVPVRRNACESVTCFRR-----SFVQICSIVRTDENDNLPGSKKIPSSGK 60
           MAM FYALNCP PVRRNA ES+T FRR     S +QI S+V+TDENDNLP SKKI S+GK
Sbjct: 6   MAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKISSAGK 65

Query: 61  SVSKCQIHKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKNGQESIPFVVCSDPGLGK 120
           SVSK +  KPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLK+GQ+SIPFVVCSDP LGK
Sbjct: 66  SVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSDPALGK 125

Query: 121 GIASLASLSTFSTSSSPHGHDEAPIVENLKRKRAFLEQSGARCLITPCHLSHGWLGDTAE 180
           GI  L SL+TF+ +SS H   +API+E LK+K  FLEQSGARCLITPCHLSH WLGDT  
Sbjct: 126 GIPPLTSLTTFTANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWLGDT-- 185

Query: 181 SCKLPFLHVGDCVTIELKEAKLKPLEAGSNVRIGLLSTDTAAVAGFYHERLQNQGFDVVL 240
           SCKLPFLHVGDCV +ELKEAKLKPLEAGS+VRIGLL+TD A V GFY ERLQNQGF+VVL
Sbjct: 186 SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQGFEVVL 245

Query: 241 PDEATMKNIIVPAVEALNKRDHEGARNLLRIAVHILLIRGVNMVILASDELLNLLPPDDP 300
           PDEAT+K+I+VPAVEALNKRD EGARNLLRIAVHILLIR VN+VILASDELLNLLPPDDP
Sbjct: 246 PDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLLPPDDP 305

Query: 301 ILKKCIDPMDALARAAIKWSRSTGILHEKA 326
           ILKKCIDPMDALARAAIKWSRSTG LHEKA
Sbjct: 306 ILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of Sed0015734 vs. ExPASy TrEMBL
Match: A0A6J1EU92 (uncharacterized protein LOC111437803 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437803 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.9e-144
Identity = 267/330 (80.91%), Postives = 288/330 (87.27%), Query Frame = 0


Query: 1   MAMSFYALNCPVPVRRNACESVTCFRR-----SFVQICSIVRTDENDNLPGSKKIPSSGK 60
           MAM FYALNCP PVRRNA ES+T FRR     S +QI S+V+TDENDNLP SKKI + GK
Sbjct: 6   MAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKISTPGK 65

Query: 61  SVSKCQIHKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKNGQESIPFVVCSDPGLGK 120
           SVSK +  KPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLK+GQ+SIPFVVCSDP LGK
Sbjct: 66  SVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSDPALGK 125

Query: 121 GIASLASLSTFSTSSSPHGHDEAPIVENLKRKRAFLEQSGARCLITPCHLSHGWLGDTAE 180
           GI  L SL+TF  +SS H   +API+E LK+K  FLEQSGARCLITPCHLSH WL DT  
Sbjct: 126 GIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWLSDT-- 185

Query: 181 SCKLPFLHVGDCVTIELKEAKLKPLEAGSNVRIGLLSTDTAAVAGFYHERLQNQGFDVVL 240
           SCKLPFLHVGDCV +ELKEAKLKPLEAGS+VRIGLL+TD A V GFY ERLQNQGF+VVL
Sbjct: 186 SCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQGFEVVL 245

Query: 241 PDEATMKNIIVPAVEALNKRDHEGARNLLRIAVHILLIRGVNMVILASDELLNLLPPDDP 300
           PDEAT+K+I+VPAVEALNKRD EGARNLLRIAVHILLIR VN+VILASDELLNLLPPDDP
Sbjct: 246 PDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLLPPDDP 305

Query: 301 ILKKCIDPMDALARAAIKWSRSTGILHEKA 326
           ILKKCIDPMDALARAAIKWSRSTG LHEKA
Sbjct: 306 ILKKCIDPMDALARAAIKWSRSTGNLHEKA 333

[Close]

BLAST of Sed0015734 vs. ExPASy TrEMBL
Match: A0A5A7TXR8 (Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00390 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.3e-140
Identity = 258/323 (79.88%), Postives = 278/323 (86.07%), Query Frame = 0


Query: 1   MAMSFYALNCPVPVRRNACESVTCFRR-----SFVQICSIVRTDENDNLPGSKKIPSSGK 60
           MAM FYA  CP PVRRNA E +T FRR     S VQI S+V+TD NDNLP SKKI S GK
Sbjct: 7   MAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKISSLGK 66

Query: 61  SVSKCQIHKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKNGQESIPFVVCSDPGLGK 120
           S+SK +  KPLLVQPNTVGVIGGVSV STLLFLEKLVWWSLK+GQESIPFVVCS+P LGK
Sbjct: 67  SLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSEPALGK 126

Query: 121 GIASLASLSTFSTSSSPHGHDEAPIVENLKRKRAFLEQSGARCLITPCHLSHGWLGDTAE 180
           GI  + SL TFST SS +GH +API+ENL RKRAFLE SGARCLITPCHL+H WL DT+E
Sbjct: 127 GIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWLSDTSE 186

Query: 181 SCKLPFLHVGDCVTIELKEAKLKPLEAGSNVRIGLLSTDTAAVAGFYHERLQNQGFDVVL 240
           SCKLPFLHVGDCV  ELKEA LKPLE G NVRIGLL+TDT  V G Y+ERLQNQGFDV+L
Sbjct: 187 SCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQGFDVLL 246

Query: 241 PDEATMKNIIVPAVEALNKRDHEGARNLLRIAVHILLIRGVNMVILASDELLNLLPPDDP 300
           PDEATMK+I++PAVEALNKRD EGARNLLRIAVH+LLIR VNMVILASDELLNLLPPDDP
Sbjct: 247 PDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLLPPDDP 306

Query: 301 ILKKCIDPMDALARAAIKWSRST 319
           ILKKCIDPMDALARAAIKWSRST
Sbjct: 307 ILKKCIDPMDALARAAIKWSRST 328

[Close]

BLAST of Sed0015734 vs. ExPASy TrEMBL
Match: A0A1S3CMU2 (uncharacterized protein LOC103502741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502741 PE=4 SV=1)

HSP 1 Score: 509.2 bits (1310), Expect = 1.3e-140
Identity = 258/323 (79.88%), Postives = 278/323 (86.07%), Query Frame = 0


Query: 1   MAMSFYALNCPVPVRRNACESVTCFRR-----SFVQICSIVRTDENDNLPGSKKIPSSGK 60
           MAM FYA  CP PVRRNA E +T FRR     S VQI S+V+TD NDNLP SKKI S GK
Sbjct: 7   MAMHFYAPICPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKISSLGK 66

Query: 61  SVSKCQIHKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKNGQESIPFVVCSDPGLGK 120
           S+SK +  KPLLVQPNTVGVIGGVSV STLLFLEKLVWWSLK+GQESIPFVVCS+P LGK
Sbjct: 67  SLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSEPALGK 126

Query: 121 GIASLASLSTFSTSSSPHGHDEAPIVENLKRKRAFLEQSGARCLITPCHLSHGWLGDTAE 180
           GI  + SL TFST SS +GH +API+ENL RKRAFLE SGARCLITPCHL+H WL DT+E
Sbjct: 127 GIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWLSDTSE 186

Query: 181 SCKLPFLHVGDCVTIELKEAKLKPLEAGSNVRIGLLSTDTAAVAGFYHERLQNQGFDVVL 240
           SCKLPFLHVGDCV  ELKEA LKPLE G NVRIGLL+TDT  V G Y+ERLQNQGFDV+L
Sbjct: 187 SCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQGFDVLL 246

Query: 241 PDEATMKNIIVPAVEALNKRDHEGARNLLRIAVHILLIRGVNMVILASDELLNLLPPDDP 300
           PDEATMK+I++PAVEALNKRD EGARNLLRIAVH+LLIR VNMVILASDELLNLLPPDDP
Sbjct: 247 PDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLLPPDDP 306

Query: 301 ILKKCIDPMDALARAAIKWSRST 319
           ILKKCIDPMDALARAAIKWSRST
Sbjct: 307 ILKKCIDPMDALARAAIKWSRST 328

[Close]

BLAST of Sed0015734 vs. ExPASy TrEMBL
Match: A0A5D3E266 (Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00430 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 2.4e-139
Identity = 257/323 (79.57%), Postives = 277/323 (85.76%), Query Frame = 0


Query: 1   MAMSFYALNCPVPVRRNACESVTCFRR-----SFVQICSIVRTDENDNLPGSKKIPSSGK 60
           MAM FYA   P PVRRNA E +T FRR     S VQI S+V+TD NDNLP SKKI S GK
Sbjct: 7   MAMHFYAPIFPAPVRRNANEGITRFRRRINLYSSVQISSVVQTDANDNLPRSKKISSLGK 66

Query: 61  SVSKCQIHKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKNGQESIPFVVCSDPGLGK 120
           S+SK +  KPLLVQPNTVGVIGGVSV STLLFLEKLVWWSLK+GQESIPFVVCS+P LGK
Sbjct: 67  SLSKTRTPKPLLVQPNTVGVIGGVSVFSTLLFLEKLVWWSLKDGQESIPFVVCSEPALGK 126

Query: 121 GIASLASLSTFSTSSSPHGHDEAPIVENLKRKRAFLEQSGARCLITPCHLSHGWLGDTAE 180
           GI  + SL TFST SS +GH +API+ENL RKRAFLE SGARCLITPCHL+H WL DT+E
Sbjct: 127 GIPPVTSLCTFSTDSSQYGHSDAPIIENLNRKRAFLELSGARCLITPCHLTHRWLSDTSE 186

Query: 181 SCKLPFLHVGDCVTIELKEAKLKPLEAGSNVRIGLLSTDTAAVAGFYHERLQNQGFDVVL 240
           SCKLPFLHVGDCV  ELKEA LKPLE G NVRIGLL+TDT  V G Y+ERLQNQGFDV+L
Sbjct: 187 SCKLPFLHVGDCVARELKEATLKPLEGGRNVRIGLLATDT-TVTGIYYERLQNQGFDVLL 246

Query: 241 PDEATMKNIIVPAVEALNKRDHEGARNLLRIAVHILLIRGVNMVILASDELLNLLPPDDP 300
           PDEATMK+I++PAVEALNKRD EGARNLLRIAVH+LLIR VNMVILASDELLNLLPPDDP
Sbjct: 247 PDEATMKHIVIPAVEALNKRDQEGARNLLRIAVHVLLIRAVNMVILASDELLNLLPPDDP 306

Query: 301 ILKKCIDPMDALARAAIKWSRST 319
           ILKKCIDPMDALARAAIKWSRST
Sbjct: 307 ILKKCIDPMDALARAAIKWSRST 328

[Close]

BLAST of Sed0015734 vs. TAIR 10
Match: AT1G15410.1 (aspartate-glutamate racemase family )

HSP 1 Score: 286.6 bits (732), Expect = 2.5e-77
Identity = 140/291 (48.11%), Postives = 203/291 (69.76%), Query Frame = 0


Query: 35  IVRTDENDNLPGSKK---IPSSGKSVSKCQIHKPLLVQPNTVGVIGGVSVISTLLFLEKL 94
           ++  DE+++LP  KK   +    ++         LL Q NTVG+IGGVS  STL F++KL
Sbjct: 40  LLHMDESNDLPKPKKGFCLSEDSRNSLNSLPADSLLRQANTVGIIGGVSTDSTLKFVKKL 99

Query: 95  VWWSLKNGQESIPFVVCSDPGLGKGIASLASLSTFSTSSSPHGHDEAP-----IVENLKR 154
           V WS  +G+ S+PFV+CSDP L K    L      S  S  H  +  P     IVENL+ 
Sbjct: 100 VDWSSNDGKSSLPFVLCSDPALNK---ELLLYEENSYPSLYHREESTPVDPKLIVENLRN 159

Query: 155 KRAFLEQSGARCLITPCHLSHGWLGDTAESCKLPFLHVGDCVTIELKEAKLKPLEAGSNV 214
           KR +LE+ GA+ ++ PCH++H W  +  E   +P LH+G+C+  EL+EAK+KPLEAG+ +
Sbjct: 160 KRRYLERCGAKLILMPCHIAHIWYEEVCEGSLVPLLHMGECIAKELQEAKMKPLEAGNPL 219

Query: 215 RIGLLSTDTAAVAGFYHERLQNQGFDVVLPDEATMKNIIVPAVEALNKRDHEGARNLLRI 274
           R+G+++T     AGFY E+LQ+ GF+ VLPD+ATM++ ++P++EA+ ++D EGARNLLRI
Sbjct: 220 RVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKRKDMEGARNLLRI 279

Query: 275 AVHILLIRGVNMVILASDELLNLLPPDDPILKKCIDPMDALARAAIKWSRS 318
           A+ +LL++ VN+V+L SDE+ +LLP DDP+LKKC+DPMDALAR+AIKW+ +
Sbjct: 280 ALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALARSAIKWAEN 327

The following BLAST results are available for this feature:

BLAST of Sed0015734 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878952.1	2.3e-149	80.91	uncharacterized protein LOC120071036 [Benincasa hispida]	[more]
XP_023006388.1	1.2e-145	81.52	uncharacterized protein LOC111499133 isoform X1 [Cucurbita maxima]	[more]
XP_023530993.1	7.8e-145	81.21	uncharacterized protein LOC111793383 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022931647.1	3.9e-144	80.91	uncharacterized protein LOC111437803 isoform X1 [Cucurbita moschata]	[more]
KAG6587918.1	1.1e-143	80.30	hypothetical protein SDJN03_16483, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Sed0015734 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0015734 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L4S4	5.8e-146	81.52	uncharacterized protein LOC111499133 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EU92	1.9e-144	80.91	uncharacterized protein LOC111437803 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7TXR8	1.3e-140	79.88	Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3CMU2	1.3e-140	79.88	uncharacterized protein LOC103502741 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3E266	2.4e-139	79.57	Amino-acid racemase isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Sed0015734 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15410.1	2.5e-77	48.11	aspartate-glutamate racemase family	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.1860		coord: 72..309 e-value: 5.7E-41 score: 142.7
None	No IPR available	GENE3D	3.40.50.1860		coord: 186..303 e-value: 5.7E-41 score: 142.7
None	No IPR available	PANTHER	PTHR21198	GLUTAMATE RACEMASE	coord: 1..318
None	No IPR available	PANTHER	PTHR21198:SF9	ASPARTATE RACEMASE	coord: 1..318
IPR015942	Asp/Glu/hydantoin racemase	PFAM	PF01177	Asp_Glu_race	coord: 76..311 e-value: 4.8E-22 score: 78.8
IPR001920	Asp/Glu racemase	SUPERFAMILY	53681	Aspartate/glutamate racemase	coord: 72..194
IPR001920	Asp/Glu racemase	SUPERFAMILY	53681	Aspartate/glutamate racemase	coord: 207..314

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015734.1	Sed0015734.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006807	nitrogen compound metabolic process
molecular_function	GO:0036361	racemase activity, acting on amino acids and derivatives
molecular_function	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives