Sed0015663 (gene) Chayote v1

Overview


Name	Sed0015663
Type	gene
Organism	Sechium edule (Chayote v1)
Description	lysine-rich arabinogalactan protein 18-like
Location	LG05: 39656812 .. 39657839 (+)
RNA-Seq Expression	Sed0015663
Synteny	Sed0015663

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCAGATCCAGTAATATTCTACCAGAATCAATTTTGTTTTTTTTAAAACATTCCTACGTGGCGCTCTCTCATTGGGTAATTTTCTCCTATTCCCGCTTCTATTTAAACCGCTTTACACCAGTGTTTGGATCTACTCTCAATTTAATTCCTTCCTCACCGACCTCGATTTCTGAACCCACATTTCCCTTTTTCTGATTCTTCTTCCCAATACGAAAATGGCGAAATCCATTGCTCTGATCTGTTGTCTTCTTTCGATCAACGCCGCTTTCTCTCTGGCTCAACCGCCGGAATCTTCGCCTTCTCCGGCACCTGTATCTGCGTCGGATTCTCCTATTCCGGCAAGTTTCCCGGCGGAATCGCCTTTGAGCTCTCCTCCGGCACCTCCGCCCTCAGATCTCACTTCTGGTGCGTCGCCACCGCCTGTTCCATCTCCGTCTCCGTCGCCGACTCCTTCACCGATGCCCGCCGACAGTGATTCCAGTAACGCCACCGCCAATGGCGGTGGAGAAGAACACTCGAAAGCCGCCGACGGCGGGATGAGCGGAGGCAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCTGCGTGTTTCGTCGGAATAGGAGGAATCGCCTACAAGAAGCGCCGAGACAACATTCGCCGATCTCAGTACGGGCAGGCCGCTAGGTCGTCGTTCCTATGAGGAACTGAATCGCGATGGTATGGAATTCTCTGCTTTACAAGAGGATGGCCTTTCTGTTGATTAACTAGCATTATTGTTTTTGTTTTGATTAGGTTTTTTTTTTTTTTTTGGTTAAGTCATTGTTCTGGAGATTGCTTGTCAATTCGTTTAATCGGCTAATTTTGAGTAGCAATGTGTGATTATTGCTCCATATGATAGTTCTTAGTTTCTTGCTTATTCAGCCGACATTGCCGCTTTCTTTGTAGTTCCTTTTTGTTGCTAAAATTTCTTGTCATACTACATATAATATAATCTTCTTCCTGCCTCATTCATCGTTGGTTTAATTTCATGGAAAATTTTGGGAG

mRNA sequence

GCGCAGATCCAGTAATATTCTACCAGAATCAATTTTGTTTTTTTTAAAACATTCCTACGTGGCGCTCTCTCATTGGGTAATTTTCTCCTATTCCCGCTTCTATTTAAACCGCTTTACACCAGTGTTTGGATCTACTCTCAATTTAATTCCTTCCTCACCGACCTCGATTTCTGAACCCACATTTCCCTTTTTCTGATTCTTCTTCCCAATACGAAAATGGCGAAATCCATTGCTCTGATCTGTTGTCTTCTTTCGATCAACGCCGCTTTCTCTCTGGCTCAACCGCCGGAATCTTCGCCTTCTCCGGCACCTGTATCTGCGTCGGATTCTCCTATTCCGGCAAGTTTCCCGGCGGAATCGCCTTTGAGCTCTCCTCCGGCACCTCCGCCCTCAGATCTCACTTCTGGTGCGTCGCCACCGCCTGTTCCATCTCCGTCTCCGTCGCCGACTCCTTCACCGATGCCCGCCGACAGTGATTCCAGTAACGCCACCGCCAATGGCGGTGGAGAAGAACACTCGAAAGCCGCCGACGGCGGGATGAGCGGAGGCAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCTGCGTGTTTCGTCGGAATAGGAGGAATCGCCTACAAGAAGCGCCGAGACAACATTCGCCGATCTCAGTACGGGCAGGCCGCTAGGTCGTCGTTCCTATGAGGAACTGAATCGCGATGGTATGGAATTCTCTGCTTTACAAGAGGATGGCCTTTCTGTTGATTAACTAGCATTATTGTTTTTGTTTTGATTAGGTTTTTTTTTTTTTTTTGGTTAAGTCATTGTTCTGGAGATTGCTTGTCAATTCGTTTAATCGGCTAATTTTGAGTAGCAATGTGTGATTATTGCTCCATATGATAGTTCTTAGTTTCTTGCTTATTCAGCCGACATTGCCGCTTTCTTTGTAGTTCCTTTTTGTTGCTAAAATTTCTTGTCATACTACATATAATATAATCTTCTTCCTGCCTCATTCATCGTTGGTTTAATTTCATGGAAAATTTTGGGAG

Coding sequence (CDS)

ATGGCGAAATCCATTGCTCTGATCTGTTGTCTTCTTTCGATCAACGCCGCTTTCTCTCTGGCTCAACCGCCGGAATCTTCGCCTTCTCCGGCACCTGTATCTGCGTCGGATTCTCCTATTCCGGCAAGTTTCCCGGCGGAATCGCCTTTGAGCTCTCCTCCGGCACCTCCGCCCTCAGATCTCACTTCTGGTGCGTCGCCACCGCCTGTTCCATCTCCGTCTCCGTCGCCGACTCCTTCACCGATGCCCGCCGACAGTGATTCCAGTAACGCCACCGCCAATGGCGGTGGAGAAGAACACTCGAAAGCCGCCGACGGCGGGATGAGCGGAGGCAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCTGCTGCGTGTTTCGTCGGAATAGGAGGAATCGCCTACAAGAAGCGCCGAGACAACATTCGCCGATCTCAGTACGGGCAGGCCGCTAGGTCGTCGTTCCTATGA

Protein sequence

MAKSIALICCLLSINAAFSLAQPPESSPSPAPVSASDSPIPASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL

Homology

[Close]

BLAST of Sed0015663 vs. NCBI nr
Match: XP_022995398.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita maxima])

HSP 1 Score: 165.2 bits (417), Expect = 4.4e-37
Identity = 113/170 (66.47%), Postives = 127/170 (74.71%), Query Frame = 0


Query: 1   MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFP 60
           MAKS+A  C LL      ++AAFSL QP E  PSP+P SA+DSP           PAS P
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  AESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSNATANGGGEEHSKAAD 120
           AESPL SPPAPPPSDLT   SP  VPSPSP+P PS + ADSD  N+ ANGGG E ++A+ 
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPS-LTADSDFRNSIANGGGGE-TEASK 120

Query: 121 GGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL 156
           GGM+GGKKAGIAVGVIAAACFVGIGGI YKKR+DNIRRSQ+G AARSSFL
Sbjct: 121 GGMNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Sed0015663 vs. NCBI nr
Match: XP_023534499.1 (alpha carbonic anhydrase 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 163.3 bits (412), Expect = 1.7e-36
Identity = 111/170 (65.29%), Postives = 126/170 (74.12%), Query Frame = 0


Query: 1   MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFP 60
           MAKS+A  C LL      ++AAFSL QP E  PSP+P SA+DSP           PAS P
Sbjct: 1   MAKSVAFYCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  AESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSNATANGGGEEHSKAAD 120
           AESPL SPPAPPPSDLT   SP  VPSPSP+P PS + ADSD  N+ ANGGG E ++ + 
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPS-LTADSDFRNSIANGGGGE-TETSK 120

Query: 121 GGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL 156
           GGM+GGKKAGIAVGVIAAACFVG+GGI YKKR+DNIRRSQ+G AARSSFL
Sbjct: 121 GGMNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Sed0015663 vs. NCBI nr
Match: KAG6605547.1 (hypothetical protein SDJN03_02864, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013894.1 hypothetical protein SDJN02_24063, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 163.3 bits (412), Expect = 1.7e-36
Identity = 111/170 (65.29%), Postives = 126/170 (74.12%), Query Frame = 0


Query: 1   MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFP 60
           MAKS+A  C LL      ++AAFSL QP E  PSP+P SA+DSP           PAS P
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  AESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSNATANGGGEEHSKAAD 120
           AESPL SPPAPPPSDLT   SP  VPSPSP+P PS + ADSD  N+ ANGGG E ++ + 
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPS-LTADSDFRNSIANGGGGE-TETSK 120

Query: 121 GGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL 156
           GGM+GGKKAGIAVGVIAAACFVG+GGI YKKR+DNIRRSQ+G AARSSFL
Sbjct: 121 GGMNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Sed0015663 vs. NCBI nr
Match: XP_022958106.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita moschata])

HSP 1 Score: 158.7 bits (400), Expect = 4.1e-35
Identity = 110/170 (64.71%), Postives = 125/170 (73.53%), Query Frame = 0


Query: 1   MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFP 60
           MAKS+A  C LL      ++AAFSL QP E  PSP+P SA+DSP           PAS P
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  AESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSNATANGGGEEHSKAAD 120
           AESPL SPPAPP SDLT   SP  VPSPSP+P PS + ADSD  N+ ANGGG E ++ + 
Sbjct: 61  AESPLKSPPAPPRSDLTPCPSPARVPSPSPAPAPS-LTADSDFRNSIANGGGGE-TETSK 120

Query: 121 GGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL 156
           GGM+GGKKAGIAVGVIAAACFVG+GGI YKKR+DNIRRSQ+G AARSSFL
Sbjct: 121 GGMNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Sed0015663 vs. NCBI nr
Match: XP_022944675.1 (alpha carbonic anhydrase 8-like [Cucurbita moschata])

HSP 1 Score: 154.8 bits (390), Expect = 5.9e-34
Identity = 107/165 (64.85%), Postives = 117/165 (70.91%), Query Frame = 0


Query: 1   MAKSIALICCLLSINAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPL 60
           MAK IA  CCLL +N AFSL Q  E  PSP P SA+  P           PAS P ESPL
Sbjct: 1   MAKFIAFCCCLLLMNVAFSLEQTEEVPPSPPPESAASFPPLLSPTPFPHAPASSPVESPL 60

Query: 61  SSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSNATANGGGEEHSKAADGGMSG 120
            SPPAPPPSDL    SP   PSPS +P PSP  AD D  N+ +N GGEE S+++ GGM+G
Sbjct: 61  HSPPAPPPSDLVPSPSPARGPSPSLNPAPSP-AADGDFRNSISNNGGEE-SESSKGGMNG 120

Query: 121 GKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL 156
           GKKAGIAVGVIAAACFVGIGGI YKKR+DNIRRSQYG AARSSFL
Sbjct: 121 GKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 163

[Close]

BLAST of Sed0015663 vs. ExPASy TrEMBL
Match: A0A6J1K7T9 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111490958 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 2.1e-37
Identity = 113/170 (66.47%), Postives = 127/170 (74.71%), Query Frame = 0


Query: 1   MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFP 60
           MAKS+A  C LL      ++AAFSL QP E  PSP+P SA+DSP           PAS P
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  AESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSNATANGGGEEHSKAAD 120
           AESPL SPPAPPPSDLT   SP  VPSPSP+P PS + ADSD  N+ ANGGG E ++A+ 
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPS-LTADSDFRNSIANGGGGE-TEASK 120

Query: 121 GGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL 156
           GGM+GGKKAGIAVGVIAAACFVGIGGI YKKR+DNIRRSQ+G AARSSFL
Sbjct: 121 GGMNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Sed0015663 vs. ExPASy TrEMBL
Match: A0A6J1H149 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111459430 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 2.0e-35
Identity = 110/170 (64.71%), Postives = 125/170 (73.53%), Query Frame = 0


Query: 1   MAKSIALICCLLS-----INAAFSLAQPPESSPSPAPVSASDSP----------IPASFP 60
           MAKS+A  C LL      ++AAFSL QP E  PSP+P SA+DSP           PAS P
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  AESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSNATANGGGEEHSKAAD 120
           AESPL SPPAPP SDLT   SP  VPSPSP+P PS + ADSD  N+ ANGGG E ++ + 
Sbjct: 61  AESPLKSPPAPPRSDLTPCPSPARVPSPSPAPAPS-LTADSDFRNSIANGGGGE-TETSK 120

Query: 121 GGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL 156
           GGM+GGKKAGIAVGVIAAACFVG+GGI YKKR+DNIRRSQ+G AARSSFL
Sbjct: 121 GGMNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Sed0015663 vs. ExPASy TrEMBL
Match: A0A6J1FYT3 (alpha carbonic anhydrase 8-like OS=Cucurbita moschata OX=3662 GN=LOC111449065 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.9e-34
Identity = 107/165 (64.85%), Postives = 117/165 (70.91%), Query Frame = 0


Query: 1   MAKSIALICCLLSINAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPL 60
           MAK IA  CCLL +N AFSL Q  E  PSP P SA+  P           PAS P ESPL
Sbjct: 1   MAKFIAFCCCLLLMNVAFSLEQTEEVPPSPPPESAASFPPLLSPTPFPHAPASSPVESPL 60

Query: 61  SSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSNATANGGGEEHSKAADGGMSG 120
            SPPAPPPSDL    SP   PSPS +P PSP  AD D  N+ +N GGEE S+++ GGM+G
Sbjct: 61  HSPPAPPPSDLVPSPSPARGPSPSLNPAPSP-AADGDFRNSISNNGGEE-SESSKGGMNG 120

Query: 121 GKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL 156
           GKKAGIAVGVIAAACFVGIGGI YKKR+DNIRRSQYG AARSSFL
Sbjct: 121 GKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 163

[Close]

BLAST of Sed0015663 vs. ExPASy TrEMBL
Match: A0A6J1JA87 (proline-rich receptor-like protein kinase PERK12 OS=Cucurbita maxima OX=3661 GN=LOC111483972 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.4e-33
Identity = 106/165 (64.24%), Postives = 117/165 (70.91%), Query Frame = 0


Query: 1   MAKSIALICCLLSINAAFSLAQPPESSPSPAPVSASDSP----------IPASFPAESPL 60
           MAK IA  CCLL +N AFSL Q  E  PS  P SA   P          +PAS P ESPL
Sbjct: 1   MAKFIAFCCCLLLMNVAFSLEQTEEVPPSSPPESAVSFPPLSSPIPFPHVPASSPVESPL 60

Query: 61  SSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPADSDSSNATANGGGEEHSKAADGGMSG 120
            SPPAPPPSDL    SP  VPSPSP+  P+P  ADSD  N+ +N GG E S+++ GGM+G
Sbjct: 61  HSPPAPPPSDLVPSPSPARVPSPSPNLAPTP-AADSDFRNSISNNGGVE-SESSKGGMNG 120

Query: 121 GKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL 156
           GKKAGIAVGVIAAACFVGIGGI YKKR+DNIRRSQYG AARSSFL
Sbjct: 121 GKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQYGNAARSSFL 163

[Close]

BLAST of Sed0015663 vs. ExPASy TrEMBL
Match: A0A6J1CIM1 (classical arabinogalactan protein 1-like OS=Momordica charantia OX=3673 GN=LOC111011307 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 3.0e-31
Identity = 103/177 (58.19%), Postives = 119/177 (67.23%), Query Frame = 0


Query: 1   MAKSIALICCL----LSINAAFSL-----AQPPESSPSPAPVSASDSP----------IP 60
           MAKS+A  C L    L IN   SL       P   SPSP+P SA+DSP           P
Sbjct: 1   MAKSVAFCCLLLFVSLLINVTVSLEPLDVTAPAGGSPSPSPQSAADSPPLPSPAPFPHAP 60

Query: 61  ASFPAESPLSSPPAPPPSDLTSGASPPPVPSPSPSPTPSPMPA---DSDSSNATANGGGE 120
           ++ P ESPL+SPPAPPPSDL    +P P PSPSPSP+P+P P+   DSD S + A+GG  
Sbjct: 61  SASPPESPLNSPPAPPPSDLPPRPAPTPSPSPSPSPSPTPAPSPNRDSDVSKSVASGGEV 120

Query: 121 EHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSFL 156
           E   A+ GGM+GGKKAGIA GVIAA CFVGIGGI YKKR++NIRRSQYG AARSSFL
Sbjct: 121 ESGAASKGGMNGGKKAGIAFGVIAAVCFVGIGGIVYKKRQNNIRRSQYGDAARSSFL 177

[Close]

BLAST of Sed0015663 vs. TAIR 10
Match: AT3G45230.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12
Identity = 70/165 (42.42%), Postives = 96/165 (58.18%), Query Frame = 0


Query: 1   MAKSIALICCLLSINAAFSLAQPPESSPSPAPVSASDSPIPA-SFPAESPL--SSPP--- 60
           +A  ++L+     I    S A  P+ + SP   ++  S + + + PAESP+  SSPP   
Sbjct: 8   VAMMLSLVLVSGEILTKSSPAPSPDLADSPLIHASPPSKLGSHNSPAESPIEYSSPPEPE 67

Query: 61  ---APPPSDLTSGASPPPVP----SPSPSPTPSPMPADSDSSNATANG-GGEEHSKAADG 120
              +P PS   S +  PP+P    SPS S +PSP P  SD +++   G  GE+    + G
Sbjct: 68  TEHSPSPSPANSPSVSPPLPNDSQSPSSSASPSPSPEASDVNHSDITGIEGEKLPSGSGG 127

Query: 121 GMSGGKKAGIAVGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAAR 152
           GMSGGKK G+A G IAA C VG+ G  YKKR++NIRRS+YG AAR
Sbjct: 128 GMSGGKKVGVAFGAIAAVCVVGVAGFVYKKRQENIRRSRYGYAAR 172

[Close]

BLAST of Sed0015663 vs. TAIR 10
Match: AT2G28440.1 (proline-rich family protein )

HSP 1 Score: 52.8 bits (125), Expect = 2.9e-07
Identity = 60/143 (41.96%), Postives = 73/143 (51.05%), Query Frame = 0


Query: 22  QPPESSPSPAPVSASDSPIPASFPAESPLSSP------PAPPPSDLTSGASPPPVPSPSP 81
           Q P SSP P  ++ S SP P     ESP SSP      P P PSD  S   P P     P
Sbjct: 129 QSPASSPKPESLADSPSPPPPPPQPESP-SSPSYPEPAPVPAPSDDDSDDDPEPETEYFP 188

Query: 82  SPTPSP---MPADSDSSNATANGGGEEHSKAADGGMSGGKKAGIAVGVIAAACFVGIGGI 141
           SP PSP   M  D  +S+A      +E  +  D GMSG +KAGIA+G I     + IG +
Sbjct: 189 SPAPSPELGMAQDIKASDAAGEELNDE--RGEDYGMSGLEKAGIAIGTILGVGAIVIGAL 248

Query: 142 AYKKRRDNIRRSQYGQAARSSFL 156
            YKKRRDN+ R++Y       FL
Sbjct: 249 VYKKRRDNMTRARYTYFTEGEFL 268

[Close]

BLAST of Sed0015663 vs. TAIR 10
Match: AT5G60630.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 7.3e-06
Identity = 47/103 (45.63%), Postives = 54/103 (52.43%), Query Frame = 0


Query: 63  SGASPPPVPSPSPSPTPS-----PMPADSDSSN-----ATANGGGEEHSKAADGGMSGGK 122
           S + P      SPSPT S     P  +    SN      +   GGEE S   + G  GGK
Sbjct: 37  SSSLPQSETEMSPSPTMSNDYDYPSSSQLTESNDLNYTDSTRPGGEEASVGGENGGGGGK 96

Query: 123 KAGIA-VGVIAAACFVGIGGIAYKKRRDNIRRSQYGQAARSSF 155
           K GIA VG IAAA  VG GG   KKRR+NIRRS+YG A+   F
Sbjct: 97  KTGIAVVGSIAAASMVGFGGYVLKKRRENIRRSRYGYASTEFF 139

The following BLAST results are available for this feature:

BLAST of Sed0015663 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022995398.1	4.4e-37	66.47	lysine-rich arabinogalactan protein 18-like [Cucurbita maxima]	[more]
XP_023534499.1	1.7e-36	65.29	alpha carbonic anhydrase 8-like [Cucurbita pepo subsp. pepo]	[more]
KAG6605547.1	1.7e-36	65.29	hypothetical protein SDJN03_02864, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022958106.1	4.1e-35	64.71	lysine-rich arabinogalactan protein 18-like [Cucurbita moschata]	[more]
XP_022944675.1	5.9e-34	64.85	alpha carbonic anhydrase 8-like [Cucurbita moschata]	[more]

BLAST of Sed0015663 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Sed0015663 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K7T9	2.1e-37	66.47	lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1H149	2.0e-35	64.71	lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1FYT3	2.9e-34	64.85	alpha carbonic anhydrase 8-like OS=Cucurbita moschata OX=3662 GN=LOC111449065 PE...	[more]
A0A6J1JA87	1.4e-33	64.24	proline-rich receptor-like protein kinase PERK12 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1CIM1	3.0e-31	58.19	classical arabinogalactan protein 1-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Sed0015663 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45230.1	1.0e-12	42.42	hydroxyproline-rich glycoprotein family protein	[more]
AT2G28440.1	2.9e-07	41.96	proline-rich family protein	[more]
AT5G60630.1	7.3e-06	45.63	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..82
None	No IPR available	PANTHER	PTHR36721:SF5	PROTEIN, PUTATIVE-RELATED	coord: 4..155
None	No IPR available	PANTHER	PTHR36721	PROLINE-RICH FAMILY PROTEIN	coord: 4..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Sed0015663.1	Sed0015663.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane