Sed0015627 (gene) Chayote v1

Overview
NameSed0015627
Typegene
OrganismSechium edule (Chayote v1)
DescriptionNDR1/HIN1-like protein 13
LocationLG04: 912686 .. 913408 (-)
RNA-Seq ExpressionSed0015627
SyntenySed0015627
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAGTCGGAGCCGGAGCGAGTTCGTTCTCCTCCTCCTCCGCCCGACCCTCACATCTTCTCTTCTGGTACCTACGTCATCCAAATCCCCAAAGATCAAATCTACCGTATCCCTCCCCCCGAAAATGCCCTAATCGTCGAGCGCCATCGTAACCCTTCTATCATCTCCTCCAACCAACGCCGCTCCTGCTGTCTCCGCTTCTTCCTCCCCATCTTCATTGTCTTCGTCTTCATCATTCTCCTTGTCCTTCTCCTCCCTCCTCTCCTCACCCCTCCAAAGCCTCCGATCGTTAAACTAACCAAATTTAAATTTTCTCCTTCGAGCCATGACTTTCGTGTTGAGCTCGACATCCGAAACCCTAACTCCGCTGGCTCCATTTCCTTTAAATCTCCTTCACGCGCCTCTGTATCGTTCCGTAAACATGAACTCGCCGCGGGAAAGTTCCCGCTCATCCGCCAAGACCATGGCTCCAGGCGACATGTCGCATTGGCACTACATGGAAGATCTTCCTTCCCAAAAGAGTTTCAACGACGGGTGAAAAACGACAAGTCGAAGCTTCGGGTGGCTATGTCTTTAAATATGAATGTTGCGGCGCAAACGACCGGTCGGTTGGGGATGAGTCAGAATGTCAGGTTTGTTGTTGTCTGTAGTTTCACGGTTAACACGTTGGGGAAAAATGCAAAGATATTGTTGCAAGATTGTGAAAGTAAACGACAATGA

mRNA sequence

ATGGCGGAGTCGGAGCCGGAGCGAGTTCGTTCTCCTCCTCCTCCGCCCGACCCTCACATCTTCTCTTCTGGTACCTACGTCATCCAAATCCCCAAAGATCAAATCTACCGTATCCCTCCCCCCGAAAATGCCCTAATCGTCGAGCGCCATCGTAACCCTTCTATCATCTCCTCCAACCAACGCCGCTCCTGCTGTCTCCGCTTCTTCCTCCCCATCTTCATTGTCTTCGTCTTCATCATTCTCCTTGTCCTTCTCCTCCCTCCTCTCCTCACCCCTCCAAAGCCTCCGATCGTTAAACTAACCAAATTTAAATTTTCTCCTTCGAGCCATGACTTTCGTGTTGAGCTCGACATCCGAAACCCTAACTCCGCTGGCTCCATTTCCTTTAAATCTCCTTCACGCGCCTCTGTATCGTTCCGTAAACATGAACTCGCCGCGGGAAAGTTCCCGCTCATCCGCCAAGACCATGGCTCCAGGCGACATGTCGCATTGGCACTACATGGAAGATCTTCCTTCCCAAAAGAGTTTCAACGACGGGTGAAAAACGACAAGTCGAAGCTTCGGGTGGCTATGTCTTTAAATATGAATGTTGCGGCGCAAACGACCGGTCGGTTGGGGATGAGTCAGAATGTCAGGTTTGTTGTTGTCTGTAGTTTCACGGTTAACACGTTGGGGAAAAATGCAAAGATATTGTTGCAAGATTGTGAAAGTAAACGACAATGA

Coding sequence (CDS)

ATGGCGGAGTCGGAGCCGGAGCGAGTTCGTTCTCCTCCTCCTCCGCCCGACCCTCACATCTTCTCTTCTGGTACCTACGTCATCCAAATCCCCAAAGATCAAATCTACCGTATCCCTCCCCCCGAAAATGCCCTAATCGTCGAGCGCCATCGTAACCCTTCTATCATCTCCTCCAACCAACGCCGCTCCTGCTGTCTCCGCTTCTTCCTCCCCATCTTCATTGTCTTCGTCTTCATCATTCTCCTTGTCCTTCTCCTCCCTCCTCTCCTCACCCCTCCAAAGCCTCCGATCGTTAAACTAACCAAATTTAAATTTTCTCCTTCGAGCCATGACTTTCGTGTTGAGCTCGACATCCGAAACCCTAACTCCGCTGGCTCCATTTCCTTTAAATCTCCTTCACGCGCCTCTGTATCGTTCCGTAAACATGAACTCGCCGCGGGAAAGTTCCCGCTCATCCGCCAAGACCATGGCTCCAGGCGACATGTCGCATTGGCACTACATGGAAGATCTTCCTTCCCAAAAGAGTTTCAACGACGGGTGAAAAACGACAAGTCGAAGCTTCGGGTGGCTATGTCTTTAAATATGAATGTTGCGGCGCAAACGACCGGTCGGTTGGGGATGAGTCAGAATGTCAGGTTTGTTGTTGTCTGTAGTTTCACGGTTAACACGTTGGGGAAAAATGCAAAGATATTGTTGCAAGATTGTGAAAGTAAACGACAATGA

Protein sequence

MAESEPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQRRSCCLRFFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKFSPSSHDFRVELDIRNPNSAGSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHGRSSFPKEFQRRVKNDKSKLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGKNAKILLQDCESKRQ
Homology
BLAST of Sed0015627 vs. NCBI nr
Match: XP_038885823.1 (NDR1/HIN1-like protein 13, partial [Benincasa hispida])

HSP 1 Score: 351.7 bits (901), Expect = 5.1e-93
Identity = 176/240 (73.33%), Postives = 208/240 (86.67%), Query Frame = 0

Query: 1   MAESEPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQ 60
           ++ +EPERV SPPPPPDP +FS+GTYV+QIPKDQIYRIPPPENALIVERHRNPSI +S++
Sbjct: 14  LSMAEPERVYSPPPPPDPSLFSAGTYVVQIPKDQIYRIPPPENALIVERHRNPSITTSSR 73

Query: 61  RRSCCLRFFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKFSPSSHDFRVELDIRN 120
           RRSCCLR FLPIF VFV I+LL LLLPPLLTPPKPP+  L KFK +PS+H F + LDI N
Sbjct: 74  RRSCCLRIFLPIFFVFVLILLLALLLPPLLTPPKPPVFDLIKFKLTPSTHKFHINLDILN 133

Query: 121 PNSAGSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHGRSSFPKEFQRRV 180
           PNSAGSISFKSPSRAS+SFRK +LA  KFPLIR +HGS+RHVAL+LH +SSFPKE QRR+
Sbjct: 134 PNSAGSISFKSPSRASLSFRKQKLATAKFPLIRTEHGSQRHVALSLHAKSSFPKELQRRM 193

Query: 181 KNDKSKLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGKNAKILLQDCESKRQ 240
           KN KSKL ++MSL M++ A+TT RL   + V+FVVVCSFTVNTLGKN++IL QDC+S+RQ
Sbjct: 194 KN-KSKLHISMSLKMDLPAETTSRLSTRREVKFVVVCSFTVNTLGKNSRILSQDCQSERQ 252

BLAST of Sed0015627 vs. NCBI nr
Match: XP_004150661.1 (NDR1/HIN1-like protein 13 [Cucumis sativus] >KAE8652926.1 hypothetical protein Csa_017751 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 2.2e-88
Identity = 166/240 (69.17%), Postives = 202/240 (84.17%), Query Frame = 0

Query: 1   MAESEPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQ 60
           MAE EPE V  PPPPPD   FSSGTYV+QIPKDQIYRIPPPENALIVERHRNPS+++S++
Sbjct: 1   MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSR 60

Query: 61  RRSCCLRFFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKFSPSSHDFRVELDIRN 120
           RRSCC R FLPIF++ + II+L LLLPPLLT PKPP+++L KFK +PS+ +F + LDI N
Sbjct: 61  RRSCCFRIFLPIFVLLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILN 120

Query: 121 PNSAGSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHGRSSFPKEFQRRV 180
           PNS GSISFKSPSR S+SFRK++LA  KFPLIRQ HGS + VAL+L  +S+FPKE +RR+
Sbjct: 121 PNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKELKRRM 180

Query: 181 KNDKSKLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGKNAKILLQDCESKRQ 240
           KN+K+KL  ++SL MN+AAQT GRL   +NV+FVV CSFTVNTLGKN++IL QDCES+RQ
Sbjct: 181 KNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ 240

BLAST of Sed0015627 vs. NCBI nr
Match: XP_008445591.1 (PREDICTED: uncharacterized protein LOC103488571 [Cucumis melo] >KAA0064830.1 NDR1/HIN1-like protein 13 [Cucumis melo var. makuwa])

HSP 1 Score: 334.0 bits (855), Expect = 1.1e-87
Identity = 165/240 (68.75%), Postives = 201/240 (83.75%), Query Frame = 0

Query: 1   MAESEPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQ 60
           MAE E E V  PPPPPDP  FSSGTYV+QIPKDQIYRIPPPENALIV+RHRNPS+++S++
Sbjct: 1   MAELELEPVHPPPPPPDPPFFSSGTYVVQIPKDQIYRIPPPENALIVQRHRNPSVVTSSR 60

Query: 61  RRSCCLRFFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKFSPSSHDFRVELDIRN 120
           RRSCC R FLPIFIV + II+L LL+PPL+  PKPP+ KLTKFK +PS+ +F + LDI N
Sbjct: 61  RRSCCFRIFLPIFIVLLLIIILALLIPPLIALPKPPVFKLTKFKLTPSTRNFNINLDILN 120

Query: 121 PNSAGSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHGRSSFPKEFQRRV 180
           PNSAGSISFKSPSR S+SFRK +LA  KFPLIRQDHGS+++VAL+L  +S+FPKE QRR+
Sbjct: 121 PNSAGSISFKSPSRVSLSFRKSQLATTKFPLIRQDHGSKKNVALSLRAKSAFPKELQRRM 180

Query: 181 KNDKSKLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGKNAKILLQDCESKRQ 240
           K+ K+KL  ++SL MN+ A+T GRL   +NV+FVV CSFTVNTLGK ++IL QDCES+RQ
Sbjct: 181 KSSKTKLHTSLSLKMNLLAETKGRLSNRRNVKFVVTCSFTVNTLGKTSRILSQDCESERQ 240

BLAST of Sed0015627 vs. NCBI nr
Match: XP_023537818.1 (NDR1/HIN1-like protein 13 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.4 bits (838), Expect = 1.0e-85
Identity = 170/238 (71.43%), Postives = 192/238 (80.67%), Query Frame = 0

Query: 5   EPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQRRSC 64
           + ER RS    PDP IFSSGTYV+QIPKDQIYRIPPPENALIVERHRNPS+ SS  RRSC
Sbjct: 2   DSERARSSYSLPDPPIFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVESSQHRRSC 61

Query: 65  CLRFFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKFSPSSHDFRVELDIRNPNSA 124
           CLRFFLPI  + + IILL +LLPPLL  PKPPIVKLT FK +PS HDF ++L+I NPNS 
Sbjct: 62  CLRFFLPIAALLLVIILLAVLLPPLLASPKPPIVKLTTFKLAPSGHDFHIKLNIHNPNSV 121

Query: 125 GSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHGR--SSFPKEFQRRVKN 184
           GS+SFKSPS A +SFRKHELA  KFPLI Q+HGS  HV LA H +  SSFPKEF+RR+++
Sbjct: 122 GSMSFKSPSHAFLSFRKHELATAKFPLIHQEHGSEEHVTLAFHAKSSSSFPKEFKRRMED 181

Query: 185 DKSKLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGKNAKILLQDCESKRQ 241
            KSKL V MSL MN+ A+T GRL M +NV FVVVCSFTVNTLGKN+KIL  DCESKRQ
Sbjct: 182 KKSKLHVVMSLKMNLPAETIGRLSMHRNVEFVVVCSFTVNTLGKNSKILSHDCESKRQ 239

BLAST of Sed0015627 vs. NCBI nr
Match: XP_022952021.1 (NDR1/HIN1-like protein 13 [Cucurbita moschata])

HSP 1 Score: 323.6 bits (828), Expect = 1.5e-84
Identity = 168/238 (70.59%), Postives = 192/238 (80.67%), Query Frame = 0

Query: 5   EPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQRRSC 64
           + ER RS    PDP IFSSGTYV+QIPKDQIYRIPPPENALIVERHRNPS+ SS  RRSC
Sbjct: 2   DSERARSSYSLPDPPIFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVESSQHRRSC 61

Query: 65  CLRFFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKFSPSSHDFRVELDIRNPNSA 124
           CLRFFLPI  + + IILL +LLPPLL  PKPPIVK+T FK +PS HDF ++L+I NPNS 
Sbjct: 62  CLRFFLPITALLLVIILLAVLLPPLLASPKPPIVKITTFKLAPSGHDFHIKLNIHNPNSI 121

Query: 125 GSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHGR--SSFPKEFQRRVKN 184
           GS+SFKSPS A +SFRKHELA  KFPLI+Q+HGS  HV L  H +  SSFPKEF+RR+++
Sbjct: 122 GSMSFKSPSHAFLSFRKHELATAKFPLIQQEHGSEEHVTLVFHAKSSSSFPKEFKRRMED 181

Query: 185 DKSKLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGKNAKILLQDCESKRQ 241
            KSKL VAMSL MN+ A+T GRL M +NV FVVVCSFTVNTL KN+KIL  DCESKRQ
Sbjct: 182 KKSKLHVAMSLKMNLPAETIGRLSMHRNVEFVVVCSFTVNTLEKNSKILSHDCESKRQ 239

BLAST of Sed0015627 vs. ExPASy Swiss-Prot
Match: Q9ZVD2 (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.3e-10
Identity = 66/241 (27.39%), Postives = 102/241 (42.32%), Query Frame = 0

Query: 4   SEPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQRRS 63
           S  E  + P PPP        TYVIQ+PKDQIYRIPPPENA   E+        SN R  
Sbjct: 22  SSGEFPKKPAPPP-------STYVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNCR-- 81

Query: 64  CCLRFFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKF--------SPSSHDFRVE 123
           CC   FL    + + +  +   +  L+  P+ P   +  F          SP S  F V 
Sbjct: 82  CCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVT 141

Query: 124 LDIRNPNSAGSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHG-RSSFPK 183
           +  RN N    + ++  S   V +   +++ G  P+  Q   +   V L L G +     
Sbjct: 142 VRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTS 201

Query: 184 EFQRRVKNDKSKLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGKNAKILLQD 236
             ++ ++N+ SK  V   L +    +       +  +   V C  TV+ L   ++I+ + 
Sbjct: 202 GMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRK 253

BLAST of Sed0015627 vs. ExPASy TrEMBL
Match: A0A0A0LK43 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G307330 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.1e-88
Identity = 166/240 (69.17%), Postives = 202/240 (84.17%), Query Frame = 0

Query: 1   MAESEPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQ 60
           MAE EPE V  PPPPPD   FSSGTYV+QIPKDQIYRIPPPENALIVERHRNPS+++S++
Sbjct: 1   MAEPEPEPVHPPPPPPDSLFFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVVTSSR 60

Query: 61  RRSCCLRFFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKFSPSSHDFRVELDIRN 120
           RRSCC R FLPIF++ + II+L LLLPPLLT PKPP+++L KFK +PS+ +F + LDI N
Sbjct: 61  RRSCCFRIFLPIFVLLLLIIILALLLPPLLTLPKPPVIELKKFKLTPSTRNFLINLDILN 120

Query: 121 PNSAGSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHGRSSFPKEFQRRV 180
           PNS GSISFKSPSR S+SFRK++LA  KFPLIRQ HGS + VAL+L  +S+FPKE +RR+
Sbjct: 121 PNSVGSISFKSPSRVSLSFRKNQLATTKFPLIRQQHGSEKKVALSLRAKSAFPKELKRRM 180

Query: 181 KNDKSKLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGKNAKILLQDCESKRQ 240
           KN+K+KL  ++SL MN+AAQT GRL   +NV+FVV CSFTVNTLGKN++IL QDCES+RQ
Sbjct: 181 KNNKTKLHTSLSLKMNLAAQTIGRLSNRRNVKFVVTCSFTVNTLGKNSRILSQDCESERQ 240

BLAST of Sed0015627 vs. ExPASy TrEMBL
Match: A0A5A7VCB9 (NDR1/HIN1-like protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001420 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 5.3e-88
Identity = 165/240 (68.75%), Postives = 201/240 (83.75%), Query Frame = 0

Query: 1   MAESEPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQ 60
           MAE E E V  PPPPPDP  FSSGTYV+QIPKDQIYRIPPPENALIV+RHRNPS+++S++
Sbjct: 1   MAELELEPVHPPPPPPDPPFFSSGTYVVQIPKDQIYRIPPPENALIVQRHRNPSVVTSSR 60

Query: 61  RRSCCLRFFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKFSPSSHDFRVELDIRN 120
           RRSCC R FLPIFIV + II+L LL+PPL+  PKPP+ KLTKFK +PS+ +F + LDI N
Sbjct: 61  RRSCCFRIFLPIFIVLLLIIILALLIPPLIALPKPPVFKLTKFKLTPSTRNFNINLDILN 120

Query: 121 PNSAGSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHGRSSFPKEFQRRV 180
           PNSAGSISFKSPSR S+SFRK +LA  KFPLIRQDHGS+++VAL+L  +S+FPKE QRR+
Sbjct: 121 PNSAGSISFKSPSRVSLSFRKSQLATTKFPLIRQDHGSKKNVALSLRAKSAFPKELQRRM 180

Query: 181 KNDKSKLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGKNAKILLQDCESKRQ 240
           K+ K+KL  ++SL MN+ A+T GRL   +NV+FVV CSFTVNTLGK ++IL QDCES+RQ
Sbjct: 181 KSSKTKLHTSLSLKMNLLAETKGRLSNRRNVKFVVTCSFTVNTLGKTSRILSQDCESERQ 240

BLAST of Sed0015627 vs. ExPASy TrEMBL
Match: A0A1S3BD32 (uncharacterized protein LOC103488571 OS=Cucumis melo OX=3656 GN=LOC103488571 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 5.3e-88
Identity = 165/240 (68.75%), Postives = 201/240 (83.75%), Query Frame = 0

Query: 1   MAESEPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQ 60
           MAE E E V  PPPPPDP  FSSGTYV+QIPKDQIYRIPPPENALIV+RHRNPS+++S++
Sbjct: 1   MAELELEPVHPPPPPPDPPFFSSGTYVVQIPKDQIYRIPPPENALIVQRHRNPSVVTSSR 60

Query: 61  RRSCCLRFFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKFSPSSHDFRVELDIRN 120
           RRSCC R FLPIFIV + II+L LL+PPL+  PKPP+ KLTKFK +PS+ +F + LDI N
Sbjct: 61  RRSCCFRIFLPIFIVLLLIIILALLIPPLIALPKPPVFKLTKFKLTPSTRNFNINLDILN 120

Query: 121 PNSAGSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHGRSSFPKEFQRRV 180
           PNSAGSISFKSPSR S+SFRK +LA  KFPLIRQDHGS+++VAL+L  +S+FPKE QRR+
Sbjct: 121 PNSAGSISFKSPSRVSLSFRKSQLATTKFPLIRQDHGSKKNVALSLRAKSAFPKELQRRM 180

Query: 181 KNDKSKLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGKNAKILLQDCESKRQ 240
           K+ K+KL  ++SL MN+ A+T GRL   +NV+FVV CSFTVNTLGK ++IL QDCES+RQ
Sbjct: 181 KSSKTKLHTSLSLKMNLLAETKGRLSNRRNVKFVVTCSFTVNTLGKTSRILSQDCESERQ 240

BLAST of Sed0015627 vs. ExPASy TrEMBL
Match: A0A6J1GJ42 (NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111454733 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 7.2e-85
Identity = 168/238 (70.59%), Postives = 192/238 (80.67%), Query Frame = 0

Query: 5   EPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQRRSC 64
           + ER RS    PDP IFSSGTYV+QIPKDQIYRIPPPENALIVERHRNPS+ SS  RRSC
Sbjct: 2   DSERARSSYSLPDPPIFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVESSQHRRSC 61

Query: 65  CLRFFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKFSPSSHDFRVELDIRNPNSA 124
           CLRFFLPI  + + IILL +LLPPLL  PKPPIVK+T FK +PS HDF ++L+I NPNS 
Sbjct: 62  CLRFFLPITALLLVIILLAVLLPPLLASPKPPIVKITTFKLAPSGHDFHIKLNIHNPNSI 121

Query: 125 GSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHGR--SSFPKEFQRRVKN 184
           GS+SFKSPS A +SFRKHELA  KFPLI+Q+HGS  HV L  H +  SSFPKEF+RR+++
Sbjct: 122 GSMSFKSPSHAFLSFRKHELATAKFPLIQQEHGSEEHVTLVFHAKSSSSFPKEFKRRMED 181

Query: 185 DKSKLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGKNAKILLQDCESKRQ 241
            KSKL VAMSL MN+ A+T GRL M +NV FVVVCSFTVNTL KN+KIL  DCESKRQ
Sbjct: 182 KKSKLHVAMSLKMNLPAETIGRLSMHRNVEFVVVCSFTVNTLEKNSKILSHDCESKRQ 239

BLAST of Sed0015627 vs. ExPASy TrEMBL
Match: A0A6J1KRQ0 (NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111496611 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 9.4e-85
Identity = 168/238 (70.59%), Postives = 191/238 (80.25%), Query Frame = 0

Query: 5   EPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQRRSC 64
           + ER RS    PDP IFSSGTYV+QIPKDQIYRIPPPENALIVERHRNPS+ SS  RRSC
Sbjct: 2   DSERARSSYSLPDPPIFSSGTYVVQIPKDQIYRIPPPENALIVERHRNPSVESSQHRRSC 61

Query: 65  CLRFFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKFSPSSHDFRVELDIRNPNSA 124
           CLRFFLPI  + + IILL +LLPPLL  PKPPIVKLT FK +PS HDF ++L+I NPNS 
Sbjct: 62  CLRFFLPIAALLLVIILLTVLLPPLLASPKPPIVKLTTFKLAPSGHDFHIKLNIHNPNSV 121

Query: 125 GSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHGR--SSFPKEFQRRVKN 184
           GS+SFKSPS A +SFRKHELA  KFPLI Q+HGS  HV L+ H +  SSFPKEF+RR+++
Sbjct: 122 GSMSFKSPSHAFLSFRKHELATAKFPLIHQEHGSEEHVTLSFHAKSSSSFPKEFKRRMED 181

Query: 185 DKSKLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGKNAKILLQDCESKRQ 241
            KSKL VAMSL MN+  +T GRL M +NV FVVVCSFTVNTL KN+KIL  DCESKRQ
Sbjct: 182 KKSKLHVAMSLKMNLPTETIGRLSMHRNVEFVVVCSFTVNTLEKNSKILSHDCESKRQ 239

BLAST of Sed0015627 vs. TAIR 10
Match: AT2G22180.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 82.8 bits (203), Expect = 4.1e-16
Identity = 71/235 (30.21%), Postives = 115/235 (48.94%), Query Frame = 0

Query: 11  SPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVE-RHRNPSIISSNQRRSCCLR-- 70
           SPP PP   I    TYV+Q+P+DQ+Y  PPPE+A  VE R +NP     N+++ C  R  
Sbjct: 65  SPPLPPPDSIPELETYVVQVPRDQVYWTPPPEHAKYVEKRSKNP---EKNKKKGCSKRLL 124

Query: 71  FFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKFSPSSHDFRVELDIRNPNSAGSI 130
           +F  I ++F F++  ++L+      P  P+  + +   +PS  +F V L   NP S   +
Sbjct: 125 WFFIILVIFGFLLGAIILILHFAFNPTLPVFAVERLTVNPS--NFEVTLRAENPTSNMGV 184

Query: 131 SFKSPSR--ASVSFRKHELAAGKFPLIRQDHGSRRHVALALHGRSSFPKEFQRRVKNDKS 190
            +        S++++   L +GKFP + Q       V + L+G +         V+   S
Sbjct: 185 RYMMEKNGVVSLTYKNKSLGSGKFPGLSQAASGSDKVNVKLNGSTK-----NAVVQPRGS 244

Query: 191 KLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTL--GKNAKILLQDCESK 239
           K  V + LNM + A+      + +N   VV C   V  L   K  +I+ ++CES+
Sbjct: 245 KQPVVLMLNMELKAEYEAG-PVKRNKEVVVTCDVKVKGLLDAKKVEIVSENCESE 288

BLAST of Sed0015627 vs. TAIR 10
Match: AT5G21130.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 68.2 bits (165), Expect = 1.0e-11
Identity = 65/251 (25.90%), Postives = 108/251 (43.03%), Query Frame = 0

Query: 5   EPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQRRSC 64
           + ++ R  PPP        GTYVI++PKDQIYR+PPPENA     HR   +      +SC
Sbjct: 45  DSQKSRIGPPP--------GTYVIKLPKDQIYRVPPPENA-----HRYEYLSRRKTNKSC 104

Query: 65  CLR---FFLPIFIVFVFIILLVLLLPPLLTPPKPP--------IVKLTKFKFSPSSHDFR 124
           C R   + L   ++ + +  +      L+  P  P        +  +     SP S   R
Sbjct: 105 CRRCLCYSLSALLIIIVLAAIAFGFFYLVYQPHKPQFSVSGVSVTGINLTSSSPFSPVIR 164

Query: 125 VELDIRNPNSAGSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHGRSSFP 184
           ++L  +N      + ++  + A V F   +L  G+F   +Q  G+   +   L G S   
Sbjct: 165 IKLRSQNVKGKLGLIYEKGNEADVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKL 224

Query: 185 KEFQRRVKNDKSK-------LRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGK 238
           K   R+   +  K       LR+   +   V + TT  + ++      V C  TV+ L  
Sbjct: 225 KSSSRKELTESQKKGKVPFGLRIKAPVKFKVGSVTTWTMTIT------VDCKITVDKLTA 276

BLAST of Sed0015627 vs. TAIR 10
Match: AT2G27080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-11
Identity = 66/241 (27.39%), Postives = 102/241 (42.32%), Query Frame = 0

Query: 4   SEPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQRRS 63
           S  E  + P PPP        TYVIQ+PKDQIYRIPPPENA   E+        SN R  
Sbjct: 22  SSGEFPKKPAPPP-------STYVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNCR-- 81

Query: 64  CCLRFFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKF--------SPSSHDFRVE 123
           CC   FL    + + +  +   +  L+  P+ P   +  F          SP S  F V 
Sbjct: 82  CCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVT 141

Query: 124 LDIRNPNSAGSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHG-RSSFPK 183
           +  RN N    + ++  S   V +   +++ G  P+  Q   +   V L L G +     
Sbjct: 142 VRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTS 201

Query: 184 EFQRRVKNDKSKLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGKNAKILLQD 236
             ++ ++N+ SK  V   L +    +       +  +   V C  TV+ L   ++I+ + 
Sbjct: 202 GMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRK 253

BLAST of Sed0015627 vs. TAIR 10
Match: AT2G27080.2 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-11
Identity = 66/241 (27.39%), Postives = 102/241 (42.32%), Query Frame = 0

Query: 4   SEPERVRSPPPPPDPHIFSSGTYVIQIPKDQIYRIPPPENALIVERHRNPSIISSNQRRS 63
           S  E  + P PPP        TYVIQ+PKDQIYRIPPPENA   E+        SN R  
Sbjct: 22  SSGEFPKKPAPPP-------STYVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNCR-- 81

Query: 64  CCLRFFLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTKFKF--------SPSSHDFRVE 123
           CC   FL    + + +  +   +  L+  P+ P   +  F          SP S  F V 
Sbjct: 82  CCFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVT 141

Query: 124 LDIRNPNSAGSISFKSPSRASVSFRKHELAAGKFPLIRQDHGSRRHVALALHG-RSSFPK 183
           +  RN N    + ++  S   V +   +++ G  P+  Q   +   V L L G +     
Sbjct: 142 VRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTS 201

Query: 184 EFQRRVKNDKSKLRVAMSLNMNVAAQTTGRLGMSQNVRFVVVCSFTVNTLGKNAKILLQD 236
             ++ ++N+ SK  V   L +    +       +  +   V C  TV+ L   ++I+ + 
Sbjct: 202 GMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRK 253

BLAST of Sed0015627 vs. TAIR 10
Match: AT1G54540.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-06
Identity = 51/207 (24.64%), Postives = 90/207 (43.48%), Query Frame = 0

Query: 45  LIVERHRNPSIISSNQRRSCCLRF--FLPIFIVFVFIILLVLLLPPLLTPPKPPIVKLTK 104
           L V+R   P +I S  R  CC  F   L + ++ +  + + + +   +  PK P  ++  
Sbjct: 31  LPVQRPIPPPVIPSKNRNMCCKIFCWVLSLLVIALIALAIAVAVVYFVFHPKLPSYEVNS 90

Query: 105 FKFS--------PSSHDFRVELDIRNPNSAGSISFKSPSRASVSFRKHELAAGKFPLIRQ 164
            + +          S +F+VE+  RNPN    I ++      V + K +L  G  P   Q
Sbjct: 91  LRVTNLGINLDLSLSAEFKVEITARNPNEKIGIYYEKGGHIGVWYDKTKLCEGPIPRFYQ 150

Query: 165 DHGSRRHVALALHGRSSFPKEFQRRVKNDKSKLRVAMSLNMNV-AAQTTGRLGMSQNVRF 224
            H +   + +AL GR+ +       ++  +   RV + L +N   A   G L M + +R 
Sbjct: 151 GHRNVTKLNVALTGRAQYGNTVLAALQQQQQTGRVPLDLKVNAPVAIKLGNLKM-KKIRI 210

Query: 225 VVVCSFTVNTLGKNAKILLQ--DCESK 239
           +  C   V++L  N  I ++  DC  K
Sbjct: 211 LGSCKLVVDSLSTNNNINIKASDCSFK 236

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038885823.15.1e-9373.33NDR1/HIN1-like protein 13, partial [Benincasa hispida][more]
XP_004150661.12.2e-8869.17NDR1/HIN1-like protein 13 [Cucumis sativus] >KAE8652926.1 hypothetical protein C... [more]
XP_008445591.11.1e-8768.75PREDICTED: uncharacterized protein LOC103488571 [Cucumis melo] >KAA0064830.1 NDR... [more]
XP_023537818.11.0e-8571.43NDR1/HIN1-like protein 13 [Cucurbita pepo subsp. pepo][more]
XP_022952021.11.5e-8470.59NDR1/HIN1-like protein 13 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Q9ZVD23.3e-1027.39NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LK431.1e-8869.17Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G307330 PE=4 SV=1[more]
A0A5A7VCB95.3e-8868.75NDR1/HIN1-like protein 13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo... [more]
A0A1S3BD325.3e-8868.75uncharacterized protein LOC103488571 OS=Cucumis melo OX=3656 GN=LOC103488571 PE=... [more]
A0A6J1GJ427.2e-8570.59NDR1/HIN1-like protein 13 OS=Cucurbita moschata OX=3662 GN=LOC111454733 PE=4 SV=... [more]
A0A6J1KRQ09.4e-8570.59NDR1/HIN1-like protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111496611 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G22180.14.1e-1630.21hydroxyproline-rich glycoprotein family protein [more]
AT5G21130.11.0e-1125.90Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G27080.12.3e-1127.39Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G27080.22.3e-1127.39Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G54540.11.0e-0624.64Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
InterPro
Analysis Name: InterPro Annotations of Chayote (edule) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 6..238
NoneNo IPR availablePANTHERPTHR31852:SF159HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEINcoord: 6..238

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Sed0015627.1Sed0015627.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane